# geneInfo

ensembl_gene_id: SAMN05421825_0034
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05421825_0035
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05421825_0042
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN05421825_0050
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05421825_0068
symbol: SDE74045.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: SAMN05421825_0073
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05421825_0077
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05421825_0086
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: SAMN05421825_0093
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05421825_0103
symbol: SDE75305.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05421825_0109
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05421825_0115
symbol: SDE75738.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN05421825_0117
symbol: SDE75777.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase /L-selenocysteine selenide-lyase (L-alanine-forming); Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: SAMN05421825_0118
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05421825_0119
symbol: SDE75856.1
gene_biotype: protein_coding
description:
  Por secretion system C-terminal sorting domain-containing protein; Belongs to the agmatine deiminase family.


ensembl_gene_id: SAMN05421825_0125
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05421825_0126
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05421825_0127
symbol: SDE76163.1
gene_biotype: protein_coding
description:
  BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.


ensembl_gene_id: SAMN05421825_0140
symbol: SDE76615.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05421825_0142
symbol: SDE76689.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN05421825_0151
symbol: SDE76989.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN05421825_0152
symbol: SDE77037.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN05421825_0154
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05421825_0156
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05421825_0165
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN05421825_0170
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN05421825_0183
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05421825_0206
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05421825_0221
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: SAMN05421825_0224
symbol: SDE79512.1
gene_biotype: protein_coding
description:
  Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: SAMN05421825_0225
symbol: SDE79549.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN05421825_0231
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05421825_0234
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05421825_0238
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05421825_0247
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05421825_0254
symbol: SDE80586.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05421825_0255
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05421825_0263
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05421825_0267
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN05421825_0274
symbol: SDE81212.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05421825_0286
symbol: SDE81615.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05421825_0303
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05421825_0313
symbol: SDE82566.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN05421825_0317
symbol: SDE82677.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05421825_0322
symbol: SDE82828.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05421825_0338
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN05421825_0359
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05421825_0374
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN05421825_0376
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05421825_0387
symbol: SDE84790.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05421825_0397
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: SAMN05421825_0402
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05421825_0403
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05421825_0404
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN05421825_0405
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05421825_0408
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05421825_0410
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05421825_0411
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05421825_0412
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05421825_0413
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05421825_0414
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05421825_0415
symbol: rplP
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05421825_0417
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05421825_0418
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05421825_0419
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05421825_0420
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05421825_0421
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: SAMN05421825_0422
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05421825_0423
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05421825_0424
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05421825_0425
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05421825_0427
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05421825_0428
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05421825_0429
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05421825_0431
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05421825_0432
symbol: rpsK
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05421825_0433
symbol: rpsD
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05421825_0434
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05421825_0459
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05421825_0483
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN05421825_0508
symbol: SDE89058.1
gene_biotype: protein_coding
description:
  Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: SAMN05421825_0510
symbol: SDE89140.1
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN05421825_0516
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05421825_0524
symbol: SDE89691.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05421825_0525
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN05421825_0529
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN05421825_0531
symbol: SDE89937.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05421825_0534
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05421825_0536
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05421825_0538
symbol: SDE90209.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05421825_0559
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05421825_0561
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN05421825_0591
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05421825_0599
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: SAMN05421825_0601
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05421825_0602
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05421825_0603
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05421825_0604
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.


ensembl_gene_id: SAMN05421825_0605
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05421825_0606
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05421825_0607
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN05421825_0611
symbol: SDE92907.1
gene_biotype: protein_coding
description:
  Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421825_0615
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: SAMN05421825_0621
symbol: SDE93241.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN05421825_0632
symbol: fabV
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+); Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.


ensembl_gene_id: SAMN05421825_0635
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05421825_0640
symbol: SDE93822.1
gene_biotype: protein_coding
description:
  2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: SAMN05421825_0649
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN05421825_0667
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05421825_0671
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05421825_0674
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05421825_0677
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05421825_0680
symbol: rpmB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L28; Manually curated; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: SAMN05421825_0685
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05421825_0690
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05421825_0693
symbol: SDE95714.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SAMN05421825_0694
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05421825_0702
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05421825_0746
symbol: SDE97830.1
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, CPA1 family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: SAMN05421825_0757
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05421825_0758
symbol: SDE98255.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05421825_0775
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05421825_0779
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05421825_0780
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05421825_0781
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05421825_0782
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05421825_0783
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05421825_0784
symbol: atpG
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05421825_0793
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05421825_0795
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN05421825_0796
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05421825_0799
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05421825_0800
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: SAMN05421825_0801
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN05421825_0814
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN05421825_0841
symbol: SDF01387.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421825_0851
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05421825_0852
symbol: yidC
gene_biotype: protein_coding
description:
  YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN05421825_0853
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA (guanosine-2'-O-)-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05421825_0855
symbol: SDF01983.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05421825_0858
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05421825_0865
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05421825_0876
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN05421825_0889
symbol: SDF03381.1
gene_biotype: protein_coding
description:
  Hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05421825_0890
symbol: SDF03430.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05421825_0892
symbol: SDF03521.1
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase superfamily protein; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: SAMN05421825_0897
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN05421825_0900
symbol: SDF03879.1
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: SAMN05421825_0907
symbol: SDF04165.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN05421825_0912
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN05421825_0914
symbol: SDF04541.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421825_0928
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05421825_0950
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05421825_0951
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05421825_0952
symbol: SDF06067.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN05421825_0954
symbol: SDF06147.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05421825_0956
symbol: SDF06240.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05421825_0958
symbol: SDF06324.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05421825_0976
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN05421825_0979
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN05421825_0980
symbol: SDF07376.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05421825_0981
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05421825_0982
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN05421825_0985
symbol: SDF07589.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: SAMN05421825_0987
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN05421825_0988
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN05421825_0989
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05421825_0990
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN05421825_0997
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05421825_1000
symbol: SDF08358.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05421825_1004
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05421825_1007
symbol: SDF08659.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05421825_1039
symbol: SDF10109.1
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: SAMN05421825_1049
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05421825_1050
symbol: SDF10558.1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421825_1051
symbol: SDF10596.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: SAMN05421825_1052
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05421825_1057
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05421825_1075
symbol: SDF11498.1
gene_biotype: protein_coding
description:
  Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family.


ensembl_gene_id: SAMN05421825_1098
symbol: SDF12526.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05421825_1105
symbol: SDF12788.1
gene_biotype: protein_coding
description:
  Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: SAMN05421825_1114
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05421825_1120
symbol: SDF13394.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05421825_1121
symbol: SDF13430.1
gene_biotype: protein_coding
description:
  Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05421825_1127
symbol: SDF13664.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05421825_1156
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05421825_1157
symbol: SDF14826.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05421825_1162
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05421825_1163
symbol: SDF15047.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).


ensembl_gene_id: SAMN05421825_1165
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: SAMN05421825_1166
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05421825_1179
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN05421825_1189
symbol: SDF16109.1
gene_biotype: protein_coding
description:
  HDIG domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN05421825_1197
symbol: SDF16503.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05421825_1220
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SAMN05421825_1224
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05421825_1234
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.


ensembl_gene_id: SAMN05421825_1235
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05421825_1239
symbol: SDF18146.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421825_1256
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05421825_1258
symbol: rpsO
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05421825_1265
symbol: SDF19267.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05421825_1306
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05421825_1315
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05421825_1320
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN05421825_1321
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN05421825_1331
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN05421825_1344
symbol: SDF22549.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05421825_1345
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05421825_1370
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05421825_1427
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05421825_1440
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05421825_1459
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05421825_1464
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05421825_1499
symbol: SDF29173.1
gene_biotype: protein_coding
description:
  T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: SAMN05421825_1507
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05421825_1560
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05421825_1600
symbol: SDF52982.1
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: SAMN05421825_1603
symbol: SDF53115.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05421825_1605
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN05421825_1620
symbol: SDF54272.1
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: SAMN05421825_1627
symbol: SDF54772.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN05421825_1629
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05421825_1631
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05421825_1633
symbol: SDF55066.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05421825_1635
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN05421825_1636
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN05421825_1643
symbol: SDF55835.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family.


ensembl_gene_id: SAMN05421825_1652
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05421825_1655
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: SAMN05421825_1662
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN05421825_1675
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN05421825_1676
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05421825_1677
symbol: SDF58262.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421825_1679
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05421825_1681
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN05421825_1684
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05421825_1685
symbol: SDF58761.1
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05421825_1686
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.


ensembl_gene_id: SAMN05421825_1687
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN05421825_1693
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05421825_1697
symbol: SDF59557.1
gene_biotype: protein_coding
description:
  Delta-60 repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.


ensembl_gene_id: SAMN05421825_1698
symbol: rlmF
gene_biotype: protein_coding
description:
  23S rRNA m(6)A-1618 methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.


ensembl_gene_id: SAMN05421825_1701
symbol: SDF59789.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05421825_1709
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN05421825_1712
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05421825_1716
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421825_1728
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05421825_1738
symbol: SDF61299.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05421825_1741
symbol: map-2
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05421825_1745
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05421825_1760
symbol: SDF62145.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05421825_1763
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05421825_1772
symbol: SDF62776.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05421825_1775
symbol: SDF62905.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05421825_1780
symbol: SDF63192.1
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: SAMN05421825_1784
symbol: SDF63323.1
gene_biotype: protein_coding
description:
  L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421825_1788
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05421825_1798
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05421825_1816
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05421825_1837
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05421825_1838
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05421825_1839
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: SAMN05421825_1840
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05421825_1842
symbol: SDF66651.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN05421825_1857
symbol: SDF67314.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN05421825_1864
symbol: SDF67770.1
gene_biotype: protein_coding
description:
  Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein.


ensembl_gene_id: SAMN05421825_1873
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05421825_1877
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05421825_1889
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05421825_1895
symbol: SDF69553.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05421825_1896
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN05421825_1899
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05421825_1902
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05421825_1905
symbol: secF
gene_biotype: protein_coding
description:
  SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: SAMN05421825_1925
symbol: SDF70945.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05421825_1929
symbol: SDF71111.1
gene_biotype: protein_coding
description:
  Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN05421825_1952
symbol: SDF72179.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05421825_1959
symbol: SDF72463.1
gene_biotype: protein_coding
description:
  Apolipoprotein D and lipocalin family protein; Belongs to the calycin superfamily. Lipocalin family.


ensembl_gene_id: SAMN05421825_1973
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05421825_1984
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05421825_1990
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05421825_1991
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05421825_1992
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05421825_1993
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05421825_1998
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05421825_1999
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05421825_2001
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05421825_2010
symbol: SDF74494.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: SAMN05421825_2013
symbol: SDF74641.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05421825_2029
symbol: SDF75310.1
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: SAMN05421825_2031
symbol: SDF75381.1
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: SAMN05421825_2037
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05421825_2040
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05421825_2044
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05421825_2070
symbol: SDF76883.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05421825_2079
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN05421825_2081
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05421825_2082
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN05421825_2096
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05421825_2106
symbol: SDF78160.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05421825_2138
symbol: SDF79160.1
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05421825_2144
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05421825_2153
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SAMN05421825_2159
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN05421825_2180
symbol: SDF80892.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN05421825_2191
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05421825_2195
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05421825_2203
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05421825_2204
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05421825_2207
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SAMN05421825_2220
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN05421825_2241
symbol: SDF83486.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN05421825_2249
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN05421825_2270
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05421825_2271
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05421825_2277
symbol: kptA
gene_biotype: protein_coding
description:
  Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: SAMN05421825_2284
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05421825_2287
symbol: SDF85265.1
gene_biotype: protein_coding
description:
  RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05421825_2288
symbol: SDF85297.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05421825_2290
symbol: SDF85369.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN05421825_2311
symbol: rplY
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05421825_2315
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05421825_2316
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN05421825_2322
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05421825_2325
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05421825_2326
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05421825_2327
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05421825_2330
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05421825_2341
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05421825_2342
symbol: SDF87325.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05421825_2354
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05421825_2360
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05421825_2362
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN05421825_2367
symbol: SDF88259.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05421825_2376
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05421825_2378
symbol: SDF88709.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN05421825_2382
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05421825_2387
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05421825_2388
symbol: SDF89075.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: SAMN05421825_2389
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05421825_2398
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05421825_2401
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN05421825_2419
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05421825_2427
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: SAMN05421825_2436
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05421825_2453
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: SAMN05421825_2459
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05421825_2500
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN05421825_2516
symbol: SDG04338.1
gene_biotype: protein_coding
description:
  phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.


ensembl_gene_id: SAMN05421825_2526
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN05421825_2528
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN05421825_2529
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN05421825_2536
symbol: SDG05049.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05421825_2537
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN05421825_2547
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN05421825_2553
symbol: SDG05698.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05421825_2558
symbol: SDG05859.1
gene_biotype: protein_coding
description:
  Por secretion system C-terminal sorting domain-containing protein; Belongs to the peptidase S8 family.


ensembl_gene_id: SAMN05421825_2566
symbol: rpsR
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05421825_2569
symbol: SDG06191.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN05421825_2573
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05421825_2586
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: SAMN05421825_2595
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05421825_2619
symbol: SDG08048.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05421825_2623
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: SAMN05421825_2625
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: SAMN05421825_2635
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN05421825_2640
symbol: atpD
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05421825_2665
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN05421825_2678
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SAMN05421825_2685
symbol: SDG10746.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421825_2696
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN05421825_2698
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase, atypical 2-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: SAMN05421825_2741
symbol: SDG12901.1
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05421825_2748
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05421825_2750
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05421825_2754
symbol: def-2
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. Belongs to the polypeptide deformylase family.


ensembl_gene_id: SAMN05421825_2755
symbol: SDG13370.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05421825_2756
symbol: SDG13401.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05421825_2761
symbol: SDG13572.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: SAMN05421825_2771
symbol: SDG13911.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.


ensembl_gene_id: SAMN05421825_2795
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SAMN05421825_2799
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05421825_2803
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05421825_2824
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN05421825_2825
symbol: SDG16054.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: SAMN05421825_2883
symbol: SDG18415.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.


ensembl_gene_id: SAMN05421825_2904
symbol: SDG19343.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05421825_2984
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN05421825_3045
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN05421825_3098
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05421825_3214
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN05421825_3239
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN05421825_3240
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05421825_3242
symbol: SDG39688.1
gene_biotype: protein_coding
description:
  Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: SAMN05421825_3265
symbol: kduI
gene_biotype: protein_coding
description:
  4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: SAMN05421825_3285
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05421825_3286
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05421825_3291
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05421825_3292
symbol: SDG41599.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05421825_3304
symbol: SDG41970.1
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05421825_3309
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05421825_3320
symbol: SDG42467.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN05421825_3328
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05421825_3331
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SAMN05421825_3333
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: SAMN05421825_3336
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05421825_3339
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05421825_3352
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: SAMN05421825_3354
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05421825_3359
symbol: SDG43858.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05421825_3369
symbol: SDG44217.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.


ensembl_gene_id: SAMN05421825_3376
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05421825_3430
symbol: SDG46575.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN05421825_3475
symbol: SDG48487.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN05421825_3480
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: SAMN05421825_3498
symbol: tatA-2
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05421825_3501
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN05421825_3502
symbol: SDG54158.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05421825_3503
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05421825_3506
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05421825_3522
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05421825_3530
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05421825_3589
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05421825_3596
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05421825_3613
symbol: SDG58370.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN05421825_3617
symbol: SDG58521.1
gene_biotype: protein_coding
description:
  tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: SAMN05421825_3624
symbol: SDG58823.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05421825_3625
symbol: SDG58855.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05421825_3626
symbol: SDG58889.1
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421825_3637
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05421825_3638
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05421825_3642
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05421825_3645
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05421825_3655
symbol: SDG59892.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05421825_3658
symbol: SDG60010.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421825_3680
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN05421825_3687
symbol: SDG61136.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05421825_3695
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05421825_3697
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05421825_3718
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05421825_3724
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05421825_3726
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05421825_3728
symbol: SDG63866.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05421825_3733
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05421825_3734
symbol: SDG64053.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421825_3735
symbol: SDG64082.1
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: SAMN05421825_3740
symbol: guaC
gene_biotype: protein_coding
description:
  GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.


# pathwayInfo

id: CL:100
description: Mixed, incl. Porin activity, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:100_Mixed,_incl._Porin_activity,_and_Cell_division


id: CL:1006
description: Mixed, incl. Knr4/Smi1-like domain superfamily, and Cellulase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1006_Mixed,_incl._Knr4/Smi1-like_domain_superfamily,_and_Cellulase_activity


id: CL:101
description: Mixed, incl. Porin activity, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:101_Mixed,_incl._Porin_activity,_and_LysM_domain


id: CL:1021
description: Mixed, incl. HmuY protein, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1021_Mixed,_incl._HmuY_protein,_and_NodB_homology_domain


id: CL:1036
description: Mostly uncharacterized, incl. GEVED domain, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1036_Mostly_uncharacterized,_incl._GEVED_domain,_and_C-type_lectin_fold


id: CL:1038
description: Mostly uncharacterized, incl. C-type lectin fold, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1038_Mostly_uncharacterized,_incl._C-type_lectin_fold,_and_ABC-2_family_transporter_protein


id: CL:1041
description: Mixed, incl. C-type lectin fold, and Outer membrane protein beta-barrel domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1041_Mixed,_incl._C-type_lectin_fold,_and_Outer_membrane_protein_beta-barrel_domain_2


id: CL:1044
description: Mixed, incl. C-type lectin fold, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1044_Mixed,_incl._C-type_lectin_fold,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:105
description: Mixed, incl. Porin activity, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:105_Mixed,_incl._Porin_activity,_and_LysM_domain


id: CL:1076
description: Mixed, incl. Metallo-peptidase family M12, and GEVED domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1076_Mixed,_incl._Metallo-peptidase_family_M12,_and_GEVED_domain


id: CL:1077
description: GEVED domain, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1077_GEVED_domain,_and_Leucine-rich_repeat_domain_superfamily


id: CL:108
description: Mostly uncharacterized, incl. Putative auto-transporter adhesin, head GIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:108_Mostly_uncharacterized,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain


id: CL:1089
description: Metallo-peptidase family M12, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1089_Metallo-peptidase_family_M12,_and_PDZ_domain_6


id: CL:1099
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1099_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. Secretion system C-terminal sorting domain, and Tetratricopeptide-like helical domain superfamily


id: CL:1101
description: Secretion system C-terminal sorting domain, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1101_Secretion_system_C-terminal_sorting_domain,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:1104
description: Secretion system C-terminal sorting domain, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1104_Secretion_system_C-terminal_sorting_domain,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:1106
description: Mixed, incl. Tyrosinase activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1106_Mixed,_incl._Tyrosinase_activity,_and_Tetratricopeptide_repeats


id: CL:1107
description: Mixed, incl. Tyrosinase activity, and Cell projection organization
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1107_Mixed,_incl._Tyrosinase_activity,_and_Cell_projection_organization


id: CL:1109
description: Mixed, incl. Cell projection organization, and Quinoprotein alcohol dehydrogenase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1109_Mixed,_incl._Cell_projection_organization,_and_Quinoprotein_alcohol_dehydrogenase-like_superfamily


id: CL:1127
description: Tetratricopeptide repeats, and Integrin alpha beta-propellor
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1127_Tetratricopeptide_repeats,_and_Integrin_alpha_beta-propellor


id: CL:1148
description: Mostly uncharacterized, incl. Cell adhesion, and Kelch-type beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1148_Mostly_uncharacterized,_incl._Cell_adhesion,_and_Kelch-type_beta_propeller


id: CL:1149
description: Mixed, incl. Cell adhesion, and cob(I)yrinic acid a,c-diamide adenosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1149_Mixed,_incl._Cell_adhesion,_and_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: CL:1160
description: Mixed, incl. Kelch-type beta propeller, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1160_Mixed,_incl._Kelch-type_beta_propeller,_and_FG-GAP_repeat


id: CL:1181
description: Mostly uncharacterized, incl. CHU_C Type IX secretion signal domain, and CUB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1181_Mostly_uncharacterized,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_CUB_domain


id: CL:1182
description: Mixed, incl. CHU_C Type IX secretion signal domain, and CUB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1182_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_CUB_domain


id: CL:1183
description: Mixed, incl. CHU_C Type IX secretion signal domain, and CUB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1183_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_CUB_domain


id: CL:1185
description: Mixed, incl. CUB domain, and Extracellular space
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1185_Mixed,_incl._CUB_domain,_and_Extracellular_space


id: CL:1205
description: Transglutaminase-like superfamily, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1205_Transglutaminase-like_superfamily,_and_Helix-turn-helix_domain


id: CL:1222
description: Lipid/polyisoprenoid-binding, YceI-like, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1222_Lipid/polyisoprenoid-binding,_YceI-like,_and_ATP-cone_domain


id: CL:1231
description: Mixed, incl. NADPH dehydrogenase YqjM-like, and Protein of unknown function DUF1569
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1231_Mixed,_incl._NADPH_dehydrogenase_YqjM-like,_and_Protein_of_unknown_function_DUF1569


id: CL:124
description: Mixed, incl. LysM domain, and Regulatory factor, effector binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:124_Mixed,_incl._LysM_domain,_and_Regulatory_factor,_effector_binding_domain_superfamily


id: CL:1242
description: Mixed, incl. ELWxxDGT repeat, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1242_Mixed,_incl._ELWxxDGT_repeat,_and_Tail_specific_protease


id: CL:1243
description: Mixed, incl. ELWxxDGT repeat, and PA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1243_Mixed,_incl._ELWxxDGT_repeat,_and_PA_domain


id: CL:1254
description: Tail specific protease, and Type II CAAX prenyl endopeptidase Rce1-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1254_Tail_specific_protease,_and_Type_II_CAAX_prenyl_endopeptidase_Rce1-like


id: CL:1266
description: Mixed, incl. Haem-binding domain, and Alternative NADH dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1266_Mixed,_incl._Haem-binding_domain,_and_Alternative_NADH_dehydrogenase


id: CL:1267
description: Haem-binding domain, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1267_Haem-binding_domain,_and_FG-GAP_repeat


id: CL:1276
description: Mixed, incl. Alternative NADH dehydrogenase, and Putative NAD(P)H nitroreductase YdjA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1276_Mixed,_incl._Alternative_NADH_dehydrogenase,_and_Putative_NAD(P)H_nitroreductase_YdjA-like


id: CL:1285
description: Mixed, incl. Peptidase M4, and Family of unknown function DUF5670
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1285_Mixed,_incl._Peptidase_M4,_and_Family_of_unknown_function_DUF5670


id: CL:1297
description: Mixed, incl. Helix-turn-helix domain, and Sugar transporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1297_Mixed,_incl._Helix-turn-helix_domain,_and_Sugar_transporter,_conserved_site


id: CL:1309
description: Mixed, incl. UmuC domain, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1309_Mixed,_incl._UmuC_domain,_and_ER-Phagosome_pathway


id: CL:1310
description: Mixed, incl. Amine catabolic process, and Protein of unknown function DUF6597
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1310_Mixed,_incl._Amine_catabolic_process,_and_Protein_of_unknown_function_DUF6597


id: CL:1312
description: Mixed, incl. YceI-like domain, and Evasion of host immune response
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1312_Mixed,_incl._YceI-like_domain,_and_Evasion_of_host_immune_response


id: CL:1329
description: UmuC domain, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1329_UmuC_domain,_and_ER-Phagosome_pathway


id: CL:1342
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1342_Mixed,_incl._Transition_metal_ion_transmembrane_transporter_activity,_and_Long-chain_fatty_acid_transporter_activity

description:
  Mixed, incl. Transition metal ion transmembrane transporter activity, and Long-chain fatty acid transporter activity


id: CL:1357
description: Mixed, incl. Envelope, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1357_Mixed,_incl._Envelope,_and_Integral_component_of_membrane


id: CL:1358
description: Mixed, incl. Envelope, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1358_Mixed,_incl._Envelope,_and_Protein_transport


id: CL:1359
description: Mixed, incl. Cell outer membrane, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1359_Mixed,_incl._Cell_outer_membrane,_and_Protein_transport


id: CL:1361
description: Mixed, incl. Siderophore transmembrane transporter activity, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1361_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_Protein_transport


id: CL:1364
description: Mixed, incl. Molecular transducer activity, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1364_Mixed,_incl._Molecular_transducer_activity,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:1365
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1365_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_TonB,_C-terminal


id: CL:1367
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1367_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_TonB,_C-terminal


id: CL:1386
description: PepSY-associated TM region, and TonB-dependent receptor, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1386_PepSY-associated_TM_region,_and_TonB-dependent_receptor,_conserved_site


id: CL:1399
description: Mixed, incl. TonB-dependent outer membrane protein, SusC/RagA, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1399_Mixed,_incl._TonB-dependent_outer_membrane_protein,_SusC/RagA,_and_SusD-like,_N-terminal


id: CL:1401
description: Outer membrane protein beta-barrel domain 3, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1401_Outer_membrane_protein_beta-barrel_domain_3,_and_Sulfite_exporter_TauE/SafE


id: CL:1431
description: Mixed, incl. Outer membrane protein beta-barrel domain 3, and TonB-dependent receptor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1431_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain_3,_and_TonB-dependent_receptor-like


id: CL:1434
description: Mixed, incl. Outer membrane protein beta-barrel domain 3, and Protein of unknown function DUF3667
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1434_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain_3,_and_Protein_of_unknown_function_DUF3667


id: CL:1436
description: Outer membrane protein beta-barrel domain 3, and Protein of unknown function DUF3667
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1436_Outer_membrane_protein_beta-barrel_domain_3,_and_Protein_of_unknown_function_DUF3667


id: CL:144
description: Mixed, incl. Reproduction, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:144_Mixed,_incl._Reproduction,_and_Cell_division_site


id: CL:1452
description: TonB-dependent receptor-like, and WD40/YVTN repeat-like-containing domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1452_TonB-dependent_receptor-like,_and_WD40/YVTN_repeat-like-containing_domain_superfamily


id: CL:1467
description: Mixed, incl. Protein of unknown function DUF2490, and Domain of unknown function DUF4349
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1467_Mixed,_incl._Protein_of_unknown_function_DUF2490,_and_Domain_of_unknown_function_DUF4349


id: CL:1476
description: Mostly uncharacterized, incl. Bacterial PH domain, and Polyol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1476_Mostly_uncharacterized,_incl._Bacterial_PH_domain,_and_Polyol_catabolic_process


id: CL:1477
description: Mostly uncharacterized, incl. Polyol catabolic process, and Ribonucleotide reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1477_Mostly_uncharacterized,_incl._Polyol_catabolic_process,_and_Ribonucleotide_reductase-like


id: CL:1478
description: Mostly uncharacterized, incl. Polyol catabolic process, and Ribonucleotide reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1478_Mostly_uncharacterized,_incl._Polyol_catabolic_process,_and_Ribonucleotide_reductase-like


id: CL:1480
description: Mixed, incl. Polyol catabolic process, and Di-haem cytochrome c peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1480_Mixed,_incl._Polyol_catabolic_process,_and_Di-haem_cytochrome_c_peroxidase


id: CL:1492
description: Mixed, incl. Ribonucleotide reductase-like, and tRNA methyl transferase HUP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1492_Mixed,_incl._Ribonucleotide_reductase-like,_and_tRNA_methyl_transferase_HUP_domain


id: CL:1501
description: Mixed, incl. Protein of unknown function DUF6266, and Carboxypeptidase regulatory-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1501_Mixed,_incl._Protein_of_unknown_function_DUF6266,_and_Carboxypeptidase_regulatory-like_domain


id: CL:1503
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1503_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Protein transport across the cell outer membrane, and Helix-turn-helix XRE-family like proteins


id: CL:1520
description: Mixed, incl. Bacterial PH domain, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1520_Mixed,_incl._Bacterial_PH_domain,_and_EamA_domain


id: CL:1535
description: Mostly uncharacterized, incl. Polysaccharide biosynthetic process, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1535_Mostly_uncharacterized,_incl._Polysaccharide_biosynthetic_process,_and_Sigma_factor_activity


id: CL:1536
description: Mostly uncharacterized, incl. Polysaccharide biosynthetic process, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1536_Mostly_uncharacterized,_incl._Polysaccharide_biosynthetic_process,_and_Sigma_factor_activity


id: CL:1537
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1537_Mostly_uncharacterized,_incl._Polysaccharide_biosynthetic_process,_and_ABC_transporter-like,_ATP-binding_domain

description:
  Mostly uncharacterized, incl. Polysaccharide biosynthetic process, and ABC transporter-like, ATP-binding domain


id: CL:1538
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1538_Mostly_uncharacterized,_incl._Capsule_organization,_and_Cell_wall_macromolecule_biosynthetic_process

description:
  Mostly uncharacterized, incl. Capsule organization, and Cell wall macromolecule biosynthetic process


id: CL:1540
description: Mostly uncharacterized, incl. Capsule organization, and Biosynthesis of ansamycins
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1540_Mostly_uncharacterized,_incl._Capsule_organization,_and_Biosynthesis_of_ansamycins


id: CL:1542
description: Mixed, incl. Capsule organization, and Biosynthesis of ansamycins
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1542_Mixed,_incl._Capsule_organization,_and_Biosynthesis_of_ansamycins


id: CL:1545
description: Mixed, incl. Capsule organization, and Regulation of protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1545_Mixed,_incl._Capsule_organization,_and_Regulation_of_protein_transport


id: CL:1565
description: Mixed, incl. VanZ-like, and EF-Hand 1, calcium-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1565_Mixed,_incl._VanZ-like,_and_EF-Hand_1,_calcium-binding_site


id: CL:1589
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1589_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Lipid_degradation


id: CL:1603
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1603_Mostly_uncharacterized,_incl._ABC_transporter-like,_conserved_site,_and_Predicted_HD_phosphohydrolase

description:
  Mostly uncharacterized, incl. ABC transporter-like, conserved site, and Predicted HD phosphohydrolase


id: CL:1605
description: Mostly uncharacterized, incl. Predicted HD phosphohydrolase, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1605_Mostly_uncharacterized,_incl._Predicted_HD_phosphohydrolase,_and_ABC-2_family_transporter_protein


id: CL:1607
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1607_Mixed,_incl._ABC-2_family_transporter_protein,_and_Putative_auto-transporter_adhesin,_head_GIN_domain

description:
  Mixed, incl. ABC-2 family transporter protein, and Putative auto-transporter adhesin, head GIN domain


id: CL:1622
description: Mixed, incl. Predicted HD phosphohydrolase, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1622_Mixed,_incl._Predicted_HD_phosphohydrolase,_and_Calcineurin-like_phosphoesterase


id: CL:164
description: Carbohydrate binding domain, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:164_Carbohydrate_binding_domain,_and_Secretion


id: CL:1644
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1644_Mixed,_incl._Protein_of_unknown_function_DUF4252,_and_Carbohydrate_derivative_transmembrane_transporter_activity

description:
  Mixed, incl. Protein of unknown function DUF4252, and Carbohydrate derivative transmembrane transporter activity


id: CL:1646
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1646_Mixed,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_Secretion_system_C-terminal_sorting_domain

description:
  Mixed, incl. Cytosolic acyl coenzyme A thioester hydrolase, and Secretion system C-terminal sorting domain


id: CL:1665
description: Mixed, incl. AI-2E family transporter, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1665_Mixed,_incl._AI-2E_family_transporter,_and_Glycosyl_transferase,_family_9


id: CL:1676
description: Mixed, incl. DNA-binding domain, and TSP type-3 repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1676_Mixed,_incl._DNA-binding_domain,_and_TSP_type-3_repeat


id: CL:1687
description: Mixed, incl. P-type ATPase, subfamily IB, and BlaI transcriptional regulatory family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1687_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_BlaI_transcriptional_regulatory_family


id: CL:1688
description: Mixed, incl. P-type ATPase, subfamily IB, and BlaI transcriptional regulatory family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1688_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_BlaI_transcriptional_regulatory_family


id: CL:1691
description: P-type ATPase, subfamily IB, and Heavy metal-associated domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1691_P-type_ATPase,_subfamily_IB,_and_Heavy_metal-associated_domain_superfamily


id: CL:1708
description: BlaI transcriptional regulatory family, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1708_BlaI_transcriptional_regulatory_family,_and_Peptidase_M56


id: CL:1720
description: Mixed, incl. Single-stranded RNA binding, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1720_Mixed,_incl._Single-stranded_RNA_binding,_and_Thioredoxin


id: CL:1737
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1737_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1738
description: Mixed, incl. Nucleotide-diphospho-sugar transferases, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1738_Mixed,_incl._Nucleotide-diphospho-sugar_transferases,_and_Glycosyl_transferases_group_1


id: CL:1739
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1739_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:1741
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1741_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:1742
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1742_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:1743
description: Mixed, incl. Nucleotide-diphospho-sugar transferases, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1743_Mixed,_incl._Nucleotide-diphospho-sugar_transferases,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1744
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1744_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:1745
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Nucleotide-sugar biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1745_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Nucleotide-sugar_biosynthetic_process


id: CL:1748
description: Polyketide sugar unit biosynthesis, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1748_Polyketide_sugar_unit_biosynthesis,_and_UDP_binding_domain


id: CL:177
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:177_Mixed,_incl._RNA_polymerase_binding,_and_Phosphatidic_acid_phosphatase_type_2/haloperoxidase_superfamily

description:
  Mixed, incl. RNA polymerase binding, and Phosphatidic acid phosphatase type 2/haloperoxidase superfamily


id: CL:1772
description: Other types of O-glycan biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1772_Other_types_of_O-glycan_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:1785
description: Mixed, incl. Glycosyltransferase like family 2, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1785_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Glycosyl_transferase_family_2


id: CL:1787
description: Mixed, incl. UDP binding domain, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1787_Mixed,_incl._UDP_binding_domain,_and_ABC-2_type_transporter


id: CL:1788
description: Mixed, incl. UDP binding domain, and Glycosyltransferase, DXD sugar-binding motif
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1788_Mixed,_incl._UDP_binding_domain,_and_Glycosyltransferase,_DXD_sugar-binding_motif


id: CL:1797
description: Mixed, incl. ABC-2 type transporter, and Polysaccharide pyruvyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1797_Mixed,_incl._ABC-2_type_transporter,_and_Polysaccharide_pyruvyl_transferase


id: CL:1820
description: Mixed, incl. Polysaccharide biosynthetic process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1820_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Polysaccharide_transport


id: CL:1822
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and Acyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1822_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Acyltransferase_family


id: CL:1824
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and Acyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1824_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Acyltransferase_family


id: CL:1827
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and EpsG family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1827_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_EpsG_family


id: CL:1859
description: Mixed, incl. Polysaccharide transport, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1859_Mixed,_incl._Polysaccharide_transport,_and_Bacterial_sugar_transferase


id: CL:1862
description: Polysaccharide transport, and Peptidyl-tyrosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1862_Polysaccharide_transport,_and_Peptidyl-tyrosine_modification


id: CL:1881
description: Mixed, incl. Glycosyl transferase, family 1, and Steroid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1881_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Steroid_biosynthetic_process


id: CL:1885
description: Mixed, incl. EpsG family, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1885_Mixed,_incl._EpsG_family,_and_Glycosyltransferase_like_family_2


id: CL:1909
description: Hexapeptide repeat of succinyl-transferase, and Polysaccharide pyruvyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1909_Hexapeptide_repeat_of_succinyl-transferase,_and_Polysaccharide_pyruvyl_transferase


id: CL:1918
description: Mixed, incl. NlpC/P60 family, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1918_Mixed,_incl._NlpC/P60_family,_and_NodB_homology_domain


id: CL:1927
description: Mixed, incl. Glucan metabolic process, and Glycosyl hydrolase, family 13, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1927_Mixed,_incl._Glucan_metabolic_process,_and_Glycosyl_hydrolase,_family_13,_catalytic_domain


id: CL:1929
description: Mixed, incl. Glucan metabolic process, and Glycosyl hydrolase, family 13, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1929_Mixed,_incl._Glucan_metabolic_process,_and_Glycosyl_hydrolase,_family_13,_catalytic_domain


id: CL:1930
description: Mixed, incl. Glycosyl hydrolase, family 13, catalytic domain, and SusE outer membrane protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1930_Mixed,_incl._Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_SusE_outer_membrane_protein


id: CL:1932
description: SusE outer membrane protein, and Amylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1932_SusE_outer_membrane_protein,_and_Amylase_activity


id: CL:1954
description: Glycogen metabolic process, and Carbohydrate binding module family 20
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1954_Glycogen_metabolic_process,_and_Carbohydrate_binding_module_family_20


id: CL:1982
description: Mixed, incl. Signaling, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1982_Mixed,_incl._Signaling,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:1983
description: Mixed, incl. Signaling, and Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1983_Mixed,_incl._Signaling,_and_Cyclic_nucleotide-binding_domain_superfamily


id: CL:1984
description: Signaling, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1984_Signaling,_and_Helix_turn_helix,_Lux_Regulon


id: CL:1985
description: Signaling, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1985_Signaling,_and_Helix_turn_helix,_Lux_Regulon


id: CL:1986
description: Signaling, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1986_Signaling,_and_Helix_turn_helix,_Lux_Regulon


id: CL:1987
description: Signaling, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1987_Signaling,_and_Helix_turn_helix,_Lux_Regulon


id: CL:1989
description: Signaling, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1989_Signaling,_and_Helix_turn_helix,_Lux_Regulon


id: CL:199
description: Mixed, incl. BON domain, and Protein of unknown function (DUF1003)
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:199_Mixed,_incl._BON_domain,_and_Protein_of_unknown_function_(DUF1003)


id: CL:1991
description: His Kinase A (phosphoacceptor) domain, and CheY-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1991_His_Kinase_A_(phosphoacceptor)_domain,_and_CheY-like_superfamily


id: CL:1993
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1993_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain_superfamily,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily, and OmpR/PhoB-type DNA-binding domain


id: CL:1995
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1995_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain_superfamily,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily, and OmpR/PhoB-type DNA-binding domain


id: CL:1996
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1996_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain_superfamily,_and_Adenylate_cyclase_activity

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily, and Adenylate cyclase activity


id: CL:1999
description: Signal transduction histidine kinase-related protein, C-terminal, and Adenylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:1999_Signal_transduction_histidine_kinase-related_protein,_C-terminal,_and_Adenylate_cyclase_activity


id: CL:201
description: Mixed, incl. Protein of unknown function (DUF1003), and Nucleoside monophosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:201_Mixed,_incl._Protein_of_unknown_function_(DUF1003),_and_Nucleoside_monophosphate_catabolic_process


id: CL:2018
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2018_OmpR/PhoB-type_DNA-binding_domain,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  OmpR/PhoB-type DNA-binding domain, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:2053
description: RNA polymerase sigma factor 54 interaction domain, and Positive regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2053_RNA_polymerase_sigma_factor_54_interaction_domain,_and_Positive_regulation_of_RNA_metabolic_process


id: CL:2072
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2072_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:2075
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2075_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:2112
description: P-type potassium transmembrane transporter activity, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2112_P-type_potassium_transmembrane_transporter_activity,_and_PAS_fold


id: CL:2123
description: Mixed, incl. Helix_turn_helix, Lux Regulon, and Protein dimerization activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2123_Mixed,_incl._Helix_turn_helix,_Lux_Regulon,_and_Protein_dimerization_activity


id: CL:2132
description: Mixed, incl. Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2132_Mixed,_incl._Peptidyl-histidine_modification


id: CL:2141
description: Mixed, incl. Cyclic nucleotide-binding domain superfamily, and Antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2141_Mixed,_incl._Cyclic_nucleotide-binding_domain_superfamily,_and_Antioxidant


id: CL:2143
description: Mixed, incl. Cyclic nucleotide-binding domain superfamily, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2143_Mixed,_incl._Cyclic_nucleotide-binding_domain_superfamily,_and_Aquaporin-like


id: CL:2145
description: Cyclic nucleotide-binding domain superfamily, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2145_Cyclic_nucleotide-binding_domain_superfamily,_and_Aquaporin-like


id: CL:2147
description: Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2147_Cyclic_nucleotide-binding_domain_superfamily


id: CL:2149
description: Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2149_Cyclic_nucleotide-binding_domain_superfamily


id: CL:2178
description: Mixed, incl. GDP metabolic process, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2178_Mixed,_incl._GDP_metabolic_process,_and_Calcineurin-like_phosphoesterase


id: CL:218
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:218_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_Phospholipid/glycerol_acyltransferase

description:
  Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and Phospholipid/glycerol acyltransferase


id: CL:2197
description: Mixed, incl. Cyclic nucleotide-binding domain, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2197_Mixed,_incl._Cyclic_nucleotide-binding_domain,_and_AhpD-like


id: CL:221
description: Mixed, incl. Regulation of DNA recombination, and Amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:221_Mixed,_incl._Regulation_of_DNA_recombination,_and_Amino_acid_transmembrane_transporter_activity


id: CL:2212
description: Mixed, incl. Signal transduction response regulator, C-terminal effector, and Putative glucoamylase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2212_Mixed,_incl._Signal_transduction_response_regulator,_C-terminal_effector,_and_Putative_glucoamylase


id: CL:2213
description: Mixed, incl. Signal transduction response regulator, C-terminal effector, and Putative glucoamylase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2213_Mixed,_incl._Signal_transduction_response_regulator,_C-terminal_effector,_and_Putative_glucoamylase


id: CL:2215
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2215_Mixed,_incl._Signal_transduction_response_regulator,_C-terminal_effector,_and_Glycosyl_hydrolase_family_30,_beta_sandwich_domain

description:
  Mixed, incl. Signal transduction response regulator, C-terminal effector, and Glycosyl hydrolase family 30, beta sandwich domain


id: CL:2216
description: Mixed, incl. Signal transduction response regulator, C-terminal effector, and Putative glucoamylase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2216_Mixed,_incl._Signal_transduction_response_regulator,_C-terminal_effector,_and_Putative_glucoamylase


id: CL:2218
description: Mixed, incl. Signal transduction response regulator, C-terminal effector, and Putative glucoamylase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2218_Mixed,_incl._Signal_transduction_response_regulator,_C-terminal_effector,_and_Putative_glucoamylase


id: CL:2221
description: Putative glucoamylase, and Lectin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2221_Putative_glucoamylase,_and_Lectin


id: CL:2233
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2233_Bacterial_regulatory_proteins,_luxR_family,_and_Signal_transduction_response_regulator,_C-terminal_effector

description:
  Bacterial regulatory proteins, luxR family, and Signal transduction response regulator, C-terminal effector


id: CL:224
description: Mixed, incl. Regulation of DNA recombination, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:224_Mixed,_incl._Regulation_of_DNA_recombination,_and_Regulation_of_growth


id: CL:2254
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2254_Mixed,_incl._Glycosyl_hydrolase_family_30,_beta_sandwich_domain,_and_EF-Hand_1,_calcium-binding_site

description:
  Mixed, incl. Glycosyl hydrolase family 30, beta sandwich domain, and EF-Hand 1, calcium-binding site


id: CL:2275
description: Regulation of lipid metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2275_Regulation_of_lipid_metabolic_process,_and_Signal


id: CL:2284
description: Mostly uncharacterized, incl. Aspartic-type peptidase activity, and Extrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2284_Mostly_uncharacterized,_incl._Aspartic-type_peptidase_activity,_and_Extrinsic_component_of_membrane


id: CL:2285
description: Mixed, incl. Extrinsic component of membrane, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2285_Mixed,_incl._Extrinsic_component_of_membrane,_and_Calcineurin-like_phosphoesterase


id: CL:2298
description: Mixed, incl. Aspartic-type peptidase activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2298_Mixed,_incl._Aspartic-type_peptidase_activity,_and_Tetratricopeptide_repeats


id: CL:2331
description: Mixed, incl. Translation, and Catalytic activity, acting on RNA
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2331_Mixed,_incl._Translation,_and_Catalytic_activity,_acting_on_RNA


id: CL:2333
description: Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2333_Translation,_and_ATP-dependent_activity


id: CL:2334
description: Translation, and Catalytic activity, acting on RNA
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2334_Translation,_and_Catalytic_activity,_acting_on_RNA


id: CL:2337
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2337_Ribosome,_and_Translation_regulator_activity


id: CL:2340
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2340_Ribosome,_and_Translation_regulator_activity


id: CL:2341
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2341_Ribosome,_and_Translation_regulator_activity


id: CL:2343
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2343_Ribosome,_and_Translation_regulator_activity


id: CL:2344
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2344_Ribosome,_and_Translation_regulator_activity


id: CL:2348
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2348_Ribosome,_and_Translation_regulator_activity


id: CL:2352
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2352_Ribosome,_and_Translation_regulator_activity


id: CL:2360
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2360_Structural_constituent_of_ribosome


id: CL:2361
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2361_Structural_constituent_of_ribosome


id: CL:2362
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2362_Structural_constituent_of_ribosome


id: CL:2363
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2363_Structural_constituent_of_ribosome


id: CL:2364
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2364_Structural_constituent_of_ribosome


id: CL:2413
description: Mixed, incl. Ribosomal subunit, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2413_Mixed,_incl._Ribosomal_subunit,_and_Ribosomal_large_subunit_assembly


id: CL:2439
description: Mixed, incl. Repressor, and Ribosomal protein L2, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2439_Mixed,_incl._Repressor,_and_Ribosomal_protein_L2,_domain_2


id: CL:244
description: PD-(D/E)XK endonuclease-like domain superfamily, and rRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:244_PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_rRNA_methylation


id: CL:2449
description: Initiation factor, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2449_Initiation_factor,_and_rRNA-binding


id: CL:2477
description: Translation protein SH3-like domain superfamily, and Repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2477_Translation_protein_SH3-like_domain_superfamily,_and_Repressor


id: CL:2505
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2505_RNA_polymerase,_and_Transcription_termination


id: CL:2542
description: Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2542_Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:2565
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2565_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:2585
description: Aminoacyl-tRNA synthetase, class II, and Leucyl-tRNA synthetase, Domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2585_Aminoacyl-tRNA_synthetase,_class_II,_and_Leucyl-tRNA_synthetase,_Domain_2


id: CL:2606
description: Mixed, incl. RNA helicase activity, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2606_Mixed,_incl._RNA_helicase_activity,_and_S1_domain


id: CL:2607
description: RNA helicase activity, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2607_RNA_helicase_activity,_and_S1_domain


id: CL:2609
description: RNA helicase, DEAD-box type, Q motif, and Carbohydrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2609_RNA_helicase,_DEAD-box_type,_Q_motif,_and_Carbohydrate_kinase


id: CL:2626
description: SpoU rRNA Methylase family, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2626_SpoU_rRNA_Methylase_family,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:2638
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2638_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:2640
description: Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2640_Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:2642
description: Protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2642_Protein_folding_chaperone,_and_Chaperone_binding


id: CL:2684
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2684_Mixed,_incl._Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel,_and_Signal_peptide_processing

description:
  Mixed, incl. Outer membrane protein/outer membrane enzyme PagP, beta-barrel, and Signal peptide processing


id: CL:2686
description: Outer membrane protein beta-barrel domain, and Protein of unknown function DUF937
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2686_Outer_membrane_protein_beta-barrel_domain,_and_Protein_of_unknown_function_DUF937


id: CL:2710
description: Oxidative phosphorylation, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2710_Oxidative_phosphorylation,_and_Serine_aminopeptidase,_S33


id: CL:2715
description: NADH dehydrogenase (quinone) activity, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2715_NADH_dehydrogenase_(quinone)_activity,_and_Aerobic_electron_transport_chain


id: CL:2717
description: NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2717_NADH_dehydrogenase_(quinone)_activity


id: CL:2719
description: NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2719_NADH_dehydrogenase_(quinone)_activity


id: CL:273
description: Mixed, incl. Membrane organization, and Protein of unknown function DUF3078
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:273_Mixed,_incl._Membrane_organization,_and_Protein_of_unknown_function_DUF3078


id: CL:275
description: Mostly uncharacterized, incl. Protein of unknown function DUF3078, and GH3 family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:275_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF3078,_and_GH3_family


id: CL:2759
description: Proton-transporting two-sector ATPase complex, and Magnesium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2759_Proton-transporting_two-sector_ATPase_complex,_and_Magnesium_ion_binding


id: CL:277
description: Protein of unknown function DUF3078, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:277_Protein_of_unknown_function_DUF3078,_and_Serine-type_endopeptidase_activity


id: CL:2784
description: Mixed, incl. Phosphopantetheine attachment site, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2784_Mixed,_incl._Phosphopantetheine_attachment_site,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:2802
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2802_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:2805
description: Homologous recombination, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2805_Homologous_recombination,_and_Nucleotide_excision_repair


id: CL:2807
description: Mixed, incl. Replisome, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2807_Mixed,_incl._Replisome,_and_DNA_damage_sensor_activity


id: CL:2809
description: Mixed, incl. RecQ zinc-binding, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2809_Mixed,_incl._RecQ_zinc-binding,_and_DNA_topoisomerase,_type_IA


id: CL:2846
description: SOS response, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2846_SOS_response,_and_Bacterial_nucleoid


id: CL:2869
description: Exonuclease, RNase T/DNA polymerase III, and DNA polymerase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2869_Exonuclease,_RNase_T/DNA_polymerase_III,_and_DNA_polymerase_complex


id: CL:2872
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2872_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases,_and_DNA_polymerase_complex

description:
  Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases, and DNA polymerase complex


id: CL:2891
description: Mixed, incl. Exodeoxyribonuclease activity, and HhH-GPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2891_Mixed,_incl._Exodeoxyribonuclease_activity,_and_HhH-GPD_domain


id: CL:2905
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2905_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:2914
description: Chromosome partition, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2914_Chromosome_partition,_and_Core-binding_(CB)_domain


id: CL:292
description: Mixed, incl. GH3 family, and Uroporphyrinogen-III synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:292_Mixed,_incl._GH3_family,_and_Uroporphyrinogen-III_synthase


id: CL:2928
description: Mixed, incl. DnaJ C terminal domain, and Lipid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2928_Mixed,_incl._DnaJ_C_terminal_domain,_and_Lipid_binding


id: CL:2947
description: DNA topoisomerase, type IIA-like domain superfamily, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2947_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Rhomboid_family


id: CL:2963
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Pantothenate and CoA biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2963_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Pantothenate_and_CoA_biosynthesis


id: CL:2966
description: tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2966_tRNA_threonylcarbamoyladenosine_modification


id: CL:2981
description: Mixed, incl. Secondary metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2981_Mixed,_incl._Secondary_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:2990
description: Mixed, incl. Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2990_Mixed,_incl._Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:2991
description: Mixed, incl. Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2991_Mixed,_incl._Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:2993
description: Mixed, incl. Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2993_Mixed,_incl._Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:2995
description: Selenocompound metabolism, and Peroxiredoxin, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2995_Selenocompound_metabolism,_and_Peroxiredoxin,_C-terminal


id: CL:2997
description: Peroxiredoxin, C-terminal, and Thioredoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:2997_Peroxiredoxin,_C-terminal,_and_Thioredoxin,_conserved_site


id: CL:3013
description: Pyridine nucleotide-disulphide oxidoreductase, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3013_Pyridine_nucleotide-disulphide_oxidoreductase,_and_Thioredoxin


id: CL:3031
description: Mixed, incl. Reactive oxygen species metabolic process, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3031_Mixed,_incl._Reactive_oxygen_species_metabolic_process,_and_Glutathione_metabolic_process


id: CL:3034
description: Superoxide dismutase activity, and Catalase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3034_Superoxide_dismutase_activity,_and_Catalase_activity


id: CL:3048
description: Mixed, incl. Sulfur dioxygenase activity, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3048_Mixed,_incl._Sulfur_dioxygenase_activity,_and_tRNA_pseudouridine_synthesis


id: CL:3072
description: Mixed, incl. Aerobic electron transport chain, and Alcohol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3072_Mixed,_incl._Aerobic_electron_transport_chain,_and_Alcohol_metabolic_process


id: CL:3073
description: Mixed, incl. Aerobic electron transport chain, and Alcohol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3073_Mixed,_incl._Aerobic_electron_transport_chain,_and_Alcohol_metabolic_process


id: CL:3074
description: Mixed, incl. Aerobic electron transport chain, and NADH oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3074_Mixed,_incl._Aerobic_electron_transport_chain,_and_NADH_oxidation


id: CL:3075
description: Mixed, incl. Aerobic electron transport chain, and NADH oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3075_Mixed,_incl._Aerobic_electron_transport_chain,_and_NADH_oxidation


id: CL:3089
description: Mixed, incl. MMPL family, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3089_Mixed,_incl._MMPL_family,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3099
description: Mixed, incl. Methyltransferase domain, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3099_Mixed,_incl._Methyltransferase_domain,_and_Thioredoxin


id: CL:3108
description: Crp-type HTH domain, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3108_Crp-type_HTH_domain,_and_Calcium_ion_transport


id: CL:3120
description: Mixed, incl. Biosynthesis of amino acids, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3120_Mixed,_incl._Biosynthesis_of_amino_acids,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:3121
description: Cellular amino acid biosynthetic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3121_Cellular_amino_acid_biosynthetic_process,_and_Cysteine_and_methionine_metabolism


id: CL:3123
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3123_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:3124
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3124_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:3125
description: Aromatic amino acid biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3125_Aromatic_amino_acid_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:313
description: Chaperone protein Skp, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:313_Chaperone_protein_Skp,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:3174
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3174_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway,_and_DegT/DnrJ/EryC1/StrS_aminotransferase_family

description:
  Aromatic amino acid family biosynthetic process, prephenate pathway, and DegT/DnrJ/EryC1/StrS aminotransferase family


id: CL:3190
description: Cysteine and methionine metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3190_Cysteine_and_methionine_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:3191
description: Glycine, serine and threonine metabolism, and O-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3191_Glycine,_serine_and_threonine_metabolism,_and_O-acetyltransferase_activity


id: CL:3193
description: Threonine biosynthetic process, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3193_Threonine_biosynthetic_process,_and_Cysteine_metabolic_process


id: CL:3195
description: Cysteine biosynthetic process, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3195_Cysteine_biosynthetic_process,_and_Ammonia-lyase_activity


id: CL:3230
description: Valine, leucine and isoleucine biosynthesis, and TPP-binding enzyme, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3230_Valine,_leucine_and_isoleucine_biosynthesis,_and_TPP-binding_enzyme,_conserved_site


id: CL:3232
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3232_Branched-chain_amino_acid_metabolic_process


id: CL:3255
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3255_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:3256
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3256_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:3258
description: Glutamine family amino acid biosynthetic process, and Diaminopimelate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3258_Glutamine_family_amino_acid_biosynthetic_process,_and_Diaminopimelate_biosynthetic_process


id: CL:326
description: Mixed, incl. Cytolysis, and Carboxypeptidase regulatory-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:326_Mixed,_incl._Cytolysis,_and_Carboxypeptidase_regulatory-like_domain


id: CL:3261
description: Arginine biosynthesis, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3261_Arginine_biosynthesis,_and_Amino_acid_binding


id: CL:3278
description: Proline biosynthetic process, and Proline catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3278_Proline_biosynthetic_process,_and_Proline_catabolic_process


id: CL:3299
description: Mixed, incl. Asparagine synthase, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3299_Mixed,_incl._Asparagine_synthase,_and_Glutamate_biosynthetic_process


id: CL:3313
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3313_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Citrate_cycle_(TCA_cycle)


id: CL:3314
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3314_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_degradation


id: CL:3316
description: Citrate cycle (TCA cycle), and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3316_Citrate_cycle_(TCA_cycle),_and_Protein_lipoylation


id: CL:3318
description: Citrate cycle (TCA cycle), and Aminoacid dehydrogenase-like, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3318_Citrate_cycle_(TCA_cycle),_and_Aminoacid_dehydrogenase-like,_N-terminal_domain_superfamily


id: CL:3319
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3319_Mixed,_incl._Malate_dehydrogenase_activity,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Malate dehydrogenase activity, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:3322
description: Malate dehydrogenase activity, and Lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3322_Malate_dehydrogenase_activity,_and_Lyase


id: CL:3344
description: CoA-ligase, and Fumarate reductase flavoprotein C-term
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3344_CoA-ligase,_and_Fumarate_reductase_flavoprotein_C-term


id: CL:3363
description: Dehydrogenase, E1 component, and e3 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3363_Dehydrogenase,_E1_component,_and_e3_binding_domain


id: CL:3365
description: Pyruvate dehydrogenase activity, and S-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3365_Pyruvate_dehydrogenase_activity,_and_S-acyltransferase_activity


id: CL:338
description: Mixed, incl. Von Willebrand factor, type A, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:338_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_ATPase,_AAA-3


id: CL:3396
description: Valine, leucine and isoleucine degradation, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3396_Valine,_leucine_and_isoleucine_degradation,_and_Benzoate_degradation


id: CL:3398
description: Fatty acid degradation, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3398_Fatty_acid_degradation,_and_Lipid_oxidation


id: CL:3399
description: Mixed, incl. Lipid oxidation, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3399_Mixed,_incl._Lipid_oxidation,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:340
description: Von Willebrand factor, type A, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:340_Von_Willebrand_factor,_type_A,_and_ATPase,_AAA-3


id: CL:3401
description: Lipid oxidation, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3401_Lipid_oxidation,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:3404
description: Lipid oxidation, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3404_Lipid_oxidation,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:3406
description: Acyl-CoA dehydrogenase, conserved site, and MaoC like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3406_Acyl-CoA_dehydrogenase,_conserved_site,_and_MaoC_like_domain


id: CL:3442
description: AMP-binding, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3442_AMP-binding,_and_acyl-CoA_dehydrogenase_activity


id: CL:3455
description: Methylmalonyl-CoA mutase, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3455_Methylmalonyl-CoA_mutase,_and_CobW/HypB/UreG,_nucleotide-binding_domain


id: CL:3470
description: Alcohol dehydrogenase-like, C-terminal, and beta-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3470_Alcohol_dehydrogenase-like,_C-terminal,_and_beta-Alanine_metabolism


id: CL:3497
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3497_Nucleobase-containing_small_molecule_metabolic_process,_and_Pteridine-containing_compound_metabolic_process

description:
  Nucleobase-containing small molecule metabolic process, and Pteridine-containing compound metabolic process


id: CL:3498
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3498_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:3499
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3499_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:3501
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3501_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:3502
description: Ribonucleoside monophosphate metabolic process, and Pyrimidine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3502_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_nucleotide_metabolic_process


id: CL:3503
description: Ribonucleoside monophosphate metabolic process, and Nucleoside-triphosphate diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3503_Ribonucleoside_monophosphate_metabolic_process,_and_Nucleoside-triphosphate_diphosphatase_activity


id: CL:3504
description: De novo IMP biosynthetic process, and Pyrimidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3504_De_novo_IMP_biosynthetic_process,_and_Pyrimidine_biosynthesis


id: CL:3507
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3507_De_novo_IMP_biosynthetic_process


id: CL:352
description: Mixed, incl. RNA methyltransferase TrmH family, and DinB-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:352_Mixed,_incl._RNA_methyltransferase_TrmH_family,_and_DinB-like_domain


id: CL:3536
description: Purine nucleoside monophosphate metabolic process, and Ribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3536_Purine_nucleoside_monophosphate_metabolic_process,_and_Ribonucleotide_catabolic_process


id: CL:3538
description: GMP biosynthesis, and Ribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3538_GMP_biosynthesis,_and_Ribonucleotide_catabolic_process


id: CL:3558
description: Mixed, incl. Ribonucleoside-diphosphate reductase complex, and CTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3558_Mixed,_incl._Ribonucleoside-diphosphate_reductase_complex,_and_CTP_metabolic_process


id: CL:3572
description: Phosphorylase superfamily, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3572_Phosphorylase_superfamily,_and_UMP_salvage


id: CL:3585
description: 5-Nucleotidase/apyrase, and Deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3585_5-Nucleotidase/apyrase,_and_Deaminase_activity


id: CL:3604
description: Mixed, incl. One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3604_Mixed,_incl._One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:3605
description: One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3605_One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:3607
description: One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3607_One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:3609
description: Glycine catabolic process, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3609_Glycine_catabolic_process,_and_Methionine_synthase_activity


id: CL:362
description: Mixed, incl. Peptidase M23, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:362_Mixed,_incl._Peptidase_M23,_and_Glycosyl_transferase,_family_9


id: CL:3640
description: Mixed, incl. One-carbon metabolism, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3640_Mixed,_incl._One-carbon_metabolism,_and_Methyltransferase_domain


id: CL:3651
description: Riboflavin metabolic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3651_Riboflavin_metabolic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:3652
description: Riboflavin metabolic process, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3652_Riboflavin_metabolic_process,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:3666
description: Pteridine-containing compound biosynthetic process, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3666_Pteridine-containing_compound_biosynthetic_process,_and_Queuosine_biosynthesis


id: CL:3677
description: Pantothenate biosynthesis, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3677_Pantothenate_biosynthesis,_and_Coenzyme_A_biosynthesis


id: CL:3686
description: Mixed, incl. Pentose phosphate pathway, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3686_Mixed,_incl._Pentose_phosphate_pathway,_and_Pentose_and_glucuronate_interconversions


id: CL:3687
description: Pentose phosphate pathway, and Monosaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3687_Pentose_phosphate_pathway,_and_Monosaccharide_metabolic_process


id: CL:3688
description: Pentose phosphate pathway, and Hexose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3688_Pentose_phosphate_pathway,_and_Hexose_metabolic_process


id: CL:3689
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3689_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:3690
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3690_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:3691
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3691_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:3752
description: Mixed, incl. Galactose metabolic process, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3752_Mixed,_incl._Galactose_metabolic_process,_and_Inositol_phosphate_metabolism


id: CL:3754
description: Inositol phosphate metabolism, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3754_Inositol_phosphate_metabolism,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:3766
description: Galactose metabolic process, and Aldose 1-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3766_Galactose_metabolic_process,_and_Aldose_1-epimerase


id: CL:3777
description: Mixed, incl. Arabinose catabolism, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3777_Mixed,_incl._Arabinose_catabolism,_and_Sodium/solute_symporter


id: CL:3778
description: Arabinose catabolism, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3778_Arabinose_catabolism,_and_Sodium/solute_symporter


id: CL:3787
description: Mixed, incl. Class II aldolase/adducin N-terminal, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3787_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_Transcription_regulator_HTH,_GntR


id: CL:3796
description: Mixed, incl. Pentose and glucuronate interconversions, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3796_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_KDPG/KHG_aldolase


id: CL:3797
description: Mixed, incl. Uronic acid metabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3797_Mixed,_incl._Uronic_acid_metabolic_process,_and_KDPG/KHG_aldolase


id: CL:3798
description: Mixed, incl. Uronic acid metabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3798_Mixed,_incl._Uronic_acid_metabolic_process,_and_KDPG/KHG_aldolase


id: CL:3811
description: Mixed, incl. Carbohydrate kinase, FGGY, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3811_Mixed,_incl._Carbohydrate_kinase,_FGGY,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:382
description: Mixed, incl. Urocanate hydratase activity, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:382_Mixed,_incl._Urocanate_hydratase_activity,_and_Lipopolysaccharide_transport


id: CL:3820
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3820_Mixed,_incl._Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses,_and_KDPG/KHG_aldolase

description:
  Mixed, incl. Intramolecular oxidoreductase activity, interconverting aldoses and ketoses, and KDPG/KHG aldolase


id: CL:3822
description: Mixed, incl. Uronate isomerase, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3822_Mixed,_incl._Uronate_isomerase,_and_KDPG/KHG_aldolase


id: CL:3840
description: Pyridine nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3840_Pyridine_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:3843
description: Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3843_Pyridine_nucleotide_metabolic_process


id: CL:3845
description: CinA, C-terminal, and Pyridine nucleotide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3845_CinA,_C-terminal,_and_Pyridine_nucleotide_biosynthesis


id: CL:3883
description: Mixed, incl. LSM domain superfamily, and RmlD substrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3883_Mixed,_incl._LSM_domain_superfamily,_and_RmlD_substrate_binding_domain


id: CL:3899
description: Mixed, incl. Fatty acid biosynthesis, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3899_Mixed,_incl._Fatty_acid_biosynthesis,_and_KR_domain


id: CL:3900
description: Mixed, incl. Fatty acid biosynthesis, and Phenylalanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3900_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phenylalanine_metabolism


id: CL:3901
description: Mixed, incl. Fatty acid biosynthesis, and 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3901_Mixed,_incl._Fatty_acid_biosynthesis,_and_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity


id: CL:3902
description: Mixed, incl. Fatty acid biosynthesis, and 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3902_Mixed,_incl._Fatty_acid_biosynthesis,_and_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity


id: CL:3904
description: Mixed, incl. Fatty acid biosynthetic process, and Biotin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3904_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Biotin_metabolism


id: CL:3907
description: Mixed, incl. Fatty acid biosynthetic process, and HotDog domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3907_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_HotDog_domain_superfamily


id: CL:3910
description: Mixed, incl. Fatty acid synthase activity, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3910_Mixed,_incl._Fatty_acid_synthase_activity,_and_Phosphopantetheine


id: CL:3911
description: Fatty acid synthase activity, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3911_Fatty_acid_synthase_activity,_and_Phosphopantetheine


id: CL:3913
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity, and Beta-ketoacyl synthase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3913_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity,_and_Beta-ketoacyl_synthase,_C-terminal


id: CL:3933
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3933_Mixed,_incl._ABC-2_family_transporter_protein,_and_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity

description:
  Mixed, incl. ABC-2 family transporter protein, and Beta-ketoacyl-acyl-carrier-protein synthase III activity


id: CL:3947
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3947_Mixed,_incl._NAD(P)-binding_Rossmann-like_domain,_and_Bacterial_lipid_A_biosynthesis_acyltransferase

description:
  Mixed, incl. NAD(P)-binding Rossmann-like domain, and Bacterial lipid A biosynthesis acyltransferase


id: CL:3961
description: Fatty acid biosynthetic process, and Biotin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3961_Fatty_acid_biosynthetic_process,_and_Biotin_metabolism


id: CL:3963
description: Beta-ketoacyl synthase, active site, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3963_Beta-ketoacyl_synthase,_active_site,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: CL:3965
description: Beta-ketoacyl synthase, active site, and S-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:3965_Beta-ketoacyl_synthase,_active_site,_and_S-acyltransferase_activity


id: CL:398
description: Mixed, incl. Protein of unknown function DUF1573, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:398_Mixed,_incl._Protein_of_unknown_function_DUF1573,_and_Transcription_antitermination


id: CL:4005
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4005_Mixed,_incl._2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity,_and_Phospholipase/Carboxylesterase

description:
  Mixed, incl. 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity, and Phospholipase/Carboxylesterase


id: CL:4007
description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4007_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity,_and_KR_domain


id: CL:4021
description: Mixed, incl. Phospholipase/Carboxylesterase, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4021_Mixed,_incl._Phospholipase/Carboxylesterase,_and_HxlR-like_helix-turn-helix


id: CL:4035
description: Mixed, incl. Antibiotic metabolic process, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4035_Mixed,_incl._Antibiotic_metabolic_process,_and_Dimeric_alpha-beta_barrel


id: CL:4038
description: Mixed, incl. Amine catabolic process, and Fumarylacetoacetase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4038_Mixed,_incl._Amine_catabolic_process,_and_Fumarylacetoacetase-like,_C-terminal


id: CL:4055
description: Phenylalanine metabolism, and Alpha-galactosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4055_Phenylalanine_metabolism,_and_Alpha-galactosidase_activity


id: CL:4056
description: Mixed, incl. Xenobiotic catabolic process, and 2Fe-2S
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4056_Mixed,_incl._Xenobiotic_catabolic_process,_and_2Fe-2S


id: CL:4060
description: Xenobiotic catabolic process, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4060_Xenobiotic_catabolic_process,_and_MIP18_family-like


id: CL:4075
description: Mixed, incl. Alpha-galactosidase activity, and MazG nucleotide pyrophosphohydrolase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4075_Mixed,_incl._Alpha-galactosidase_activity,_and_MazG_nucleotide_pyrophosphohydrolase_domain


id: CL:4091
description: Mixed, incl. Ferritin-like, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4091_Mixed,_incl._Ferritin-like,_and_Nucleus


id: CL:4094
description: Mixed, incl. mRNA processing, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4094_Mixed,_incl._mRNA_processing,_and_Coenzyme_F420_binding


id: CL:4114
description: Mixed, incl. Alternative NADH dehydrogenase, and Domain of unknown function DUF2383
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4114_Mixed,_incl._Alternative_NADH_dehydrogenase,_and_Domain_of_unknown_function_DUF2383


id: CL:4128
description: Mixed, incl. Thiamine metabolic process, and Cis-trans isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4128_Mixed,_incl._Thiamine_metabolic_process,_and_Cis-trans_isomerase_activity


id: CL:4130
description: Thiamine metabolic process, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4130_Thiamine_metabolic_process,_and_ABC_transporter


id: CL:415
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:415_Mixed,_incl._Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity,_and_Phosphoribosyl-ATP_pyrophosphohydrolase

description:
  Mixed, incl. Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, and Phosphoribosyl-ATP pyrophosphohydrolase


id: CL:4154
description: Mixed, incl. Thioesterase-like superfamily, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4154_Mixed,_incl._Thioesterase-like_superfamily,_and_Metalloprotease


id: CL:4163
description: Mixed, incl. Porphyrin-containing compound biosynthetic process, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4163_Mixed,_incl._Porphyrin-containing_compound_biosynthetic_process,_and_Iron-sulfur_cluster_assembly


id: CL:4164
description: Mixed, incl. Porphyrin-containing compound biosynthetic process, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4164_Mixed,_incl._Porphyrin-containing_compound_biosynthetic_process,_and_Heme_binding


id: CL:4165
description: Mixed, incl. Heme binding, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4165_Mixed,_incl._Heme_binding,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:4166
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4166_Mixed,_incl._Cytochrome_c-like_domain_superfamily,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain

description:
  Mixed, incl. Cytochrome c-like domain superfamily, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain


id: CL:4167
description: Mixed, incl. Cytochrome c-like domain, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4167_Mixed,_incl._Cytochrome_c-like_domain,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:4168
description: Mixed, incl. Cytochrome c-like domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4168_Mixed,_incl._Cytochrome_c-like_domain,_and_4Fe-4S_binding_domain


id: CL:4169
description: Mixed, incl. Cytochrome c-like domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4169_Mixed,_incl._Cytochrome_c-like_domain,_and_4Fe-4S_binding_domain


id: CL:4171
description: Cytochrome c-like domain, and Oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4171_Cytochrome_c-like_domain,_and_Oxidoreductase_activity


id: CL:4194
description: Mixed, incl. Anaerobic respiration, and Twin-arginine translocation pathway, signal sequence
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4194_Mixed,_incl._Anaerobic_respiration,_and_Twin-arginine_translocation_pathway,_signal_sequence


id: CL:4207
description: Crp-type HTH domain, and RNA pseudouridylate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4207_Crp-type_HTH_domain,_and_RNA_pseudouridylate_synthase


id: CL:4216
description: Mixed, incl. Ribosomal protein S13-like, H2TH, and dGTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4216_Mixed,_incl._Ribosomal_protein_S13-like,_H2TH,_and_dGTP_metabolic_process


id: CL:4225
description: Mostly uncharacterized, incl. Methyltransferase domain, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4225_Mostly_uncharacterized,_incl._Methyltransferase_domain,_and_Glycosyl_transferase_4-like


id: CL:4226
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4226_Mostly_uncharacterized,_incl._Glycosyl_transferase_4-like,_and_Peptidase_M1,_alanine_aminopeptidase/leukotriene_A4_hydrolase

description:
  Mostly uncharacterized, incl. Glycosyl transferase 4-like, and Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase


id: CL:4228
description: Mixed, incl. Glycosyl transferase 4-like, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4228_Mixed,_incl._Glycosyl_transferase_4-like,_and_Enzyme_binding


id: CL:4249
description: Mixed, incl. Methyltransferase domain, and DNA methylase, N-6 adenine-specific, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4249_Mixed,_incl._Methyltransferase_domain,_and_DNA_methylase,_N-6_adenine-specific,_conserved_site


id: CL:4260
description: Porphyrin-containing compound biosynthetic process, and Glucose transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4260_Porphyrin-containing_compound_biosynthetic_process,_and_Glucose_transmembrane_transporter_activity


id: CL:4261
description: Heme biosynthetic process, and Uroporphyrinogen-III synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4261_Heme_biosynthetic_process,_and_Uroporphyrinogen-III_synthase


id: CL:4263
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4263_Protoporphyrinogen_IX_metabolic_process


id: CL:4282
description: Mixed, incl. HemN C-terminal domain, and Glucose transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4282_Mixed,_incl._HemN_C-terminal_domain,_and_Glucose_transmembrane_transporter_activity


id: CL:4295
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4295_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Transferase_activity,_transferring_sulphur-containing_groups

description:
  Mixed, incl. Iron-sulfur cluster assembly, and Transferase activity, transferring sulphur-containing groups


id: CL:4296
description: Iron-sulfur cluster assembly, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4296_Iron-sulfur_cluster_assembly,_and_Sulfurtransferase_activity


id: CL:4299
description: Iron-sulfur cluster assembly, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4299_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase


id: CL:4321
description: Mixed, incl. Iron-sulfur cluster assembly, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4321_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Methylthiotransferase


id: CL:433
description: Mixed, incl. Sulfate transport, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:433_Mixed,_incl._Sulfate_transport,_and_Redoxin


id: CL:4334
description: Mixed, incl. ncRNA processing, and Helix_turn_helix ASNC type
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4334_Mixed,_incl._ncRNA_processing,_and_Helix_turn_helix_ASNC_type


id: CL:4335
description: Mixed, incl. tRNA wobble base modification, and rRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4335_Mixed,_incl._tRNA_wobble_base_modification,_and_rRNA_processing


id: CL:4336
description: Mixed, incl. tRNA wobble base modification, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4336_Mixed,_incl._tRNA_wobble_base_modification,_and_rRNA_methyltransferase_activity


id: CL:4338
description: Mixed, incl. Tetrapyrrole methylase superfamily, and Prolipoprotein diacylglyceryl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4338_Mixed,_incl._Tetrapyrrole_methylase_superfamily,_and_Prolipoprotein_diacylglyceryl_transferase


id: CL:4355
description: tRNA wobble base modification, and tRNA methyl transferase HUP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4355_tRNA_wobble_base_modification,_and_tRNA_methyl_transferase_HUP_domain


id: CL:4369
description: Mixed, incl. Helix_turn_helix ASNC type, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4369_Mixed,_incl._Helix_turn_helix_ASNC_type,_and_PUA-like_superfamily


id: CL:4383
description: Mixed, incl. Nucleoside recognition, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4383_Mixed,_incl._Nucleoside_recognition,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:4398
description: Mixed, incl. HIT-like superfamily, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4398_Mixed,_incl._HIT-like_superfamily,_and_D-amino_acid_metabolic_process


id: CL:4414
description: Mostly uncharacterized, incl. Sulfate assimilation, and Phosphoprotein phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4414_Mostly_uncharacterized,_incl._Sulfate_assimilation,_and_Phosphoprotein_phosphatase_activity


id: CL:4415
description: Mixed, incl. Sulfate assimilation, and Phosphoprotein phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4415_Mixed,_incl._Sulfate_assimilation,_and_Phosphoprotein_phosphatase_activity


id: CL:4416
description: Mixed, incl. Sulfate assimilation, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4416_Mixed,_incl._Sulfate_assimilation,_and_Amino_acid_transport


id: CL:4419
description: Sulfate assimilation, and Ferrochelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4419_Sulfate_assimilation,_and_Ferrochelatase_activity


id: CL:4439
description: Mixed, incl. Phosphoprotein phosphatase activity, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4439_Mixed,_incl._Phosphoprotein_phosphatase_activity,_and_AI-2E_family_transporter


id: CL:444
description: Mostly uncharacterized, incl. NUDIX hydrolase, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:444_Mostly_uncharacterized,_incl._NUDIX_hydrolase,_and_Amidase_activity


id: CL:4442
description: Mixed, incl. Sodium Bile acid symporter family, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4442_Mixed,_incl._Sodium_Bile_acid_symporter_family,_and_Blockage_of_phagosome_acidification


id: CL:446
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:446_Mixed,_incl._Extrinsic_component_of_plasma_membrane,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. Extrinsic component of plasma membrane, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:4461
description: Mixed, incl. HDIG domain, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4461_Mixed,_incl._HDIG_domain,_and_Methyltransferase_domain


id: CL:4477
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4477_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Positive_regulation_of_cellular_process

description:
  Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Positive regulation of cellular process


id: CL:4479
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4479_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Glycosyl_transferase_family_2


id: CL:4480
description: Mixed, incl. Menaquinone biosynthesis, and Enolase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4480_Mixed,_incl._Menaquinone_biosynthesis,_and_Enolase-like,_N-terminal


id: CL:4481
description: Mixed, incl. Menaquinone biosynthesis, and Enolase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4481_Mixed,_incl._Menaquinone_biosynthesis,_and_Enolase-like,_N-terminal


id: CL:4495
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4495_Mixed,_incl._Positive_regulation_of_RNA_metabolic_process,_and_Phospholipid/glycerol_acyltransferase

description:
  Mixed, incl. Positive regulation of RNA metabolic process, and Phospholipid/glycerol acyltransferase


id: CL:4506
description: Mixed, incl. Lactone catabolic process, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4506_Mixed,_incl._Lactone_catabolic_process,_and_Glycosylation


id: CL:4532
description: Mixed, incl. TPM domain, and MamQ/LemA
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4532_Mixed,_incl._TPM_domain,_and_MamQ/LemA


id: CL:4533
description: Mixed, incl. TatD related DNase, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4533_Mixed,_incl._TatD_related_DNase,_and_RNA_5-end_processing


id: CL:4535
description: Mixed, incl. TatD related DNase, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4535_Mixed,_incl._TatD_related_DNase,_and_RNA_5-end_processing


id: CL:4561
description: Mixed, incl. Polyamine metabolic process, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4561_Mixed,_incl._Polyamine_metabolic_process,_and_ACT_domain


id: CL:4563
description: Polyamine metabolic process, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4563_Polyamine_metabolic_process,_and_Sugar_(and_other)_transporter


id: CL:4579
description: Mixed, incl. Peptidase S46, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4579_Mixed,_incl._Peptidase_S46,_and_NodB_homology_domain


id: CL:4589
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4589_Mostly_uncharacterized,_incl._Periplasmic_binding_protein,_and_23S_rRNA-intervening_sequence_protein

description:
  Mostly uncharacterized, incl. Periplasmic binding protein, and 23S rRNA-intervening sequence protein


id: CL:4590
description: Mixed, incl. Periplasmic binding protein, and 23S rRNA-intervening sequence protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4590_Mixed,_incl._Periplasmic_binding_protein,_and_23S_rRNA-intervening_sequence_protein


id: CL:4591
description: Mixed, incl. Periplasmic binding protein, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4591_Mixed,_incl._Periplasmic_binding_protein,_and_FecCD_transport_family


id: CL:4594
description: Mixed, incl. FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4594_Mixed,_incl._FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:4622
description: 23S rRNA-intervening sequence protein, and Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4622_23S_rRNA-intervening_sequence_protein,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:4634
description: Mixed, incl. GxxExxY protein, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4634_Mixed,_incl._GxxExxY_protein,_and_Cytochrome_complex_assembly


id: CL:464
description: Mixed, incl. NUDIX hydrolase, and Acid-thiol ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:464_Mixed,_incl._NUDIX_hydrolase,_and_Acid-thiol_ligase_activity


id: CL:4651
description: Mostly uncharacterized, incl. Sulphur transport, and Ferritin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4651_Mostly_uncharacterized,_incl._Sulphur_transport,_and_Ferritin


id: CL:4652
description: Mostly uncharacterized, incl. Ferritin, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4652_Mostly_uncharacterized,_incl._Ferritin,_and_Methyltransferase_domain


id: CL:4653
description: Mostly uncharacterized, incl. Ferritin, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4653_Mostly_uncharacterized,_incl._Ferritin,_and_Methyltransferase_domain


id: CL:4655
description: Mixed, incl. Ferritin, and Cellular response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4655_Mixed,_incl._Ferritin,_and_Cellular_response_to_heat


id: CL:4676
description: Mixed, incl. Lactone catabolic process, and Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4676_Mixed,_incl._Lactone_catabolic_process,_and_Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:4689
description: Sulphur transport, and Helix_turn_helix, cAMP Regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4689_Sulphur_transport,_and_Helix_turn_helix,_cAMP_Regulatory_protein


id: CL:4705
description: Mixed, incl. RNA methyltransferase TrmH family, and Protein of unknown function DUF3667
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4705_Mixed,_incl._RNA_methyltransferase_TrmH_family,_and_Protein_of_unknown_function_DUF3667


id: CL:4717
description: Mixed, incl. beta-Lactam resistance, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4717_Mixed,_incl._beta-Lactam_resistance,_and_ABC_transporters


id: CL:4718
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4718_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:4719
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4719_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:4720
description: Mixed, incl. beta-Lactam resistance, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4720_Mixed,_incl._beta-Lactam_resistance,_and_MacB-like_periplasmic_core_domain


id: CL:4721
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4721_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4723
description: Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4723_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4724
description: Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4724_Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4725
description: Outer membrane efflux protein, and Hydrophobe/amphiphile efflux-1 HAE1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4725_Outer_membrane_efflux_protein,_and_Hydrophobe/amphiphile_efflux-1_HAE1


id: CL:4727
description: Palmitate, and Hydrophobe/amphiphile efflux-1 HAE1
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4727_Palmitate,_and_Hydrophobe/amphiphile_efflux-1_HAE1


id: CL:473
description: Mixed, incl. Aminoglycan biosynthetic process, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:473_Mixed,_incl._Aminoglycan_biosynthetic_process,_and_Regulation_of_cell_shape


id: CL:474
description: Mixed, incl. Regulation of cell shape, and Peptidoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:474_Mixed,_incl._Regulation_of_cell_shape,_and_Peptidoglycan_metabolic_process


id: CL:4743
description: Outer membrane efflux protein, and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4743_Outer_membrane_efflux_protein,_and_Sterol-sensing_domain


id: CL:475
description: Mixed, incl. Regulation of cell shape, and Peptidoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:475_Mixed,_incl._Regulation_of_cell_shape,_and_Peptidoglycan_metabolic_process


id: CL:4754
description: Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4754_Cation_efflux_system_CzcA/CusA/SilA/NccA/HelA/CnrA,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4765
description: MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4765_MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:4767
description: MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4767_MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:4768
description: MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4768_MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:477
description: Regulation of cell shape, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:477_Regulation_of_cell_shape,_and_Carboxypeptidase


id: CL:4777
description: MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4777_MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:479
description: Regulation of cell shape, and Penicillin-binding protein, dimerisation domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:479_Regulation_of_cell_shape,_and_Penicillin-binding_protein,_dimerisation_domain_superfamily


id: CL:4801
description: Mixed, incl. Cation efflux system protein CusB, domain 1, and Flavodoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4801_Mixed,_incl._Cation_efflux_system_protein_CusB,_domain_1,_and_Flavodoxin-like_fold


id: CL:4816
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4816_Mostly_uncharacterized,_incl._Adenylate_cyclase_activity,_and_Beta-ketoacyl-[acyl-carrier-protein]_synthase_III

description:
  Mostly uncharacterized, incl. Adenylate cyclase activity, and Beta-ketoacyl-[acyl-carrier-protein] synthase III


id: CL:4818
description: Mixed, incl. Beta-ketoacyl-[acyl-carrier-protein] synthase III, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4818_Mixed,_incl._Beta-ketoacyl-[acyl-carrier-protein]_synthase_III,_and_Lipid_degradation


id: CL:4837
description: Mixed, incl. Vicinal oxygen chelate (VOC) domain, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4837_Mixed,_incl._Vicinal_oxygen_chelate_(VOC)_domain,_and_Methyltransferase_domain_25


id: CL:4838
description: Mixed, incl. Domain of unknown function DUF6268, and Domain of unknown function DUF2147
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4838_Mixed,_incl._Domain_of_unknown_function_DUF6268,_and_Domain_of_unknown_function_DUF2147


id: CL:4841
description: Mixed, incl. Lipoprotein transport, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4841_Mixed,_incl._Lipoprotein_transport,_and_FtsX-like_permease_family


id: CL:4857
description: Mixed, incl. Glyoxalase-like domain, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4857_Mixed,_incl._Glyoxalase-like_domain,_and_Methyltransferase_domain_25


id: CL:4869
description: Mixed, incl. Redoxin, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4869_Mixed,_incl._Redoxin,_and_Type_1_protein_exporter


id: CL:487
description: Mur ligase, C-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:487_Mur_ligase,_C-terminal,_and_Glycosyl_transferase_family_4


id: CL:4883
description: Mostly uncharacterized, incl. Protein of unknown function DUF4932, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4883_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF4932,_and_Nitrogen_metabolism


id: CL:4884
description: Mixed, incl. Protein of unknown function DUF4932, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4884_Mixed,_incl._Protein_of_unknown_function_DUF4932,_and_Nitrogen_metabolism


id: CL:4885
description: Mostly uncharacterized, incl. Ami_2, and Armadillo-like helical
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4885_Mostly_uncharacterized,_incl._Ami_2,_and_Armadillo-like_helical


id: CL:4887
description: Mixed, incl. Armadillo-like helical, and Barstar-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4887_Mixed,_incl._Armadillo-like_helical,_and_Barstar-like_superfamily


id: CL:4907
description: Mixed, incl. Protein of unknown function DUF4870, and Kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4907_Mixed,_incl._Protein_of_unknown_function_DUF4870,_and_Kinase_activity


id: CL:4923
description: Mixed, incl. Bestrophin-like, and Glycosyl hydrolase, five-bladed beta-propellor domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4923_Mixed,_incl._Bestrophin-like,_and_Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily


id: CL:4936
description: Mixed, incl. Glutathione metabolism, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4936_Mixed,_incl._Glutathione_metabolism,_and_Esterase-like


id: CL:4937
description: Mixed, incl. Glutamate-cysteine ligase activity, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4937_Mixed,_incl._Glutamate-cysteine_ligase_activity,_and_Esterase-like


id: CL:4939
description: Mixed, incl. Glutamate-cysteine ligase activity, and Putative esterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4939_Mixed,_incl._Glutamate-cysteine_ligase_activity,_and_Putative_esterase


id: CL:4942
description: Glutamate-cysteine ligase activity, and Glutamine amidotransferase class-I
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4942_Glutamate-cysteine_ligase_activity,_and_Glutamine_amidotransferase_class-I


id: CL:4967
description: Mixed, incl. Phospholipase/Carboxylesterase, and Bacterial exopeptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4967_Mixed,_incl._Phospholipase/Carboxylesterase,_and_Bacterial_exopeptidase_dimerisation_domain


id: CL:4994
description: Mixed, incl. DNA binding HTH domain, AraC-type, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4994_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_NAD(P)-binding_domain_superfamily


id: CL:4995
description: Mixed, incl. DNA binding HTH domain, AraC-type, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4995_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_NAD(P)-binding_domain_superfamily


id: CL:4996
description: Mixed, incl. DNA binding HTH domain, AraC-type, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4996_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_NAD(P)-binding_domain_superfamily


id: CL:4997
description: Mixed, incl. DNA binding HTH domain, AraC-type, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4997_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_KR_domain


id: CL:4998
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4998_Mixed,_incl._Short-chain_dehydrogenase/reductase,_conserved_site,_and_Homeobox-like_domain_superfamily

description:
  Mixed, incl. Short-chain dehydrogenase/reductase, conserved site, and Homeobox-like domain superfamily


id: CL:4999
description: Mixed, incl. Homeobox-like domain superfamily, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:4999_Mixed,_incl._Homeobox-like_domain_superfamily,_and_Aldo/keto_reductase_family


id: CL:5000
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5000_Mixed,_incl._Short-chain_dehydrogenase/reductase,_conserved_site,_and_Homeobox-like_domain_superfamily

description:
  Mixed, incl. Short-chain dehydrogenase/reductase, conserved site, and Homeobox-like domain superfamily


id: CL:5001
description: Mostly uncharacterized, incl. Antibiotic biosynthesis monooxygenase, and Import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5001_Mostly_uncharacterized,_incl._Antibiotic_biosynthesis_monooxygenase,_and_Import_into_cell


id: CL:5003
description: Mixed, incl. Import into cell, and RibD C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5003_Mixed,_incl._Import_into_cell,_and_RibD_C-terminal_domain


id: CL:5024
description: Mixed, incl. Ferrous iron transporter, core domain, and DoxX-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5024_Mixed,_incl._Ferrous_iron_transporter,_core_domain,_and_DoxX-like_family


id: CL:5039
description: Mostly uncharacterized, incl. CocE/Serine esterase, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5039_Mostly_uncharacterized,_incl._CocE/Serine_esterase,_and_Epoxide_hydrolase-like


id: CL:5041
description: Mixed, incl. Domain of unknown function DUF2147, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5041_Mixed,_incl._Domain_of_unknown_function_DUF2147,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:5053
description: Mixed, incl. CocE/Serine esterase, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5053_Mixed,_incl._CocE/Serine_esterase,_and_Epoxide_hydrolase-like


id: CL:5072
description: Aldo/keto reductase family, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5072_Aldo/keto_reductase_family,_and_Epoxide_hydrolase-like


id: CL:5089
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5089_Mostly_uncharacterized,_incl._Sugar_(and_other)_transporter,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Mostly uncharacterized, incl. Sugar (and other) transporter, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:5090
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5090_Mixed,_incl._NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Phenylacetic_acid_degradation-related_domain

description:
  Mixed, incl. NADH:flavin oxidoreductase / NADH oxidase family, and Phenylacetic acid degradation-related domain


id: CL:5102
description: Mixed, incl. Sugar (and other) transporter, and Naphthalene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5102_Mixed,_incl._Sugar_(and_other)_transporter,_and_Naphthalene_degradation


id: CL:5115
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5115_Mixed,_incl._Helix_turn_helix,_arabinose_operon_control_protein,_and_O-Antigen_nucleotide_sugar_biosynthesis

description:
  Mixed, incl. Helix_turn_helix, arabinose operon control protein, and O-Antigen nucleotide sugar biosynthesis


id: CL:5116
description: Helix_turn_helix, arabinose operon control protein, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5116_Helix_turn_helix,_arabinose_operon_control_protein,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:5118
description: Helix_turn_helix, arabinose operon control protein, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5118_Helix_turn_helix,_arabinose_operon_control_protein,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:5119
description: Helix_turn_helix, arabinose operon control protein, and Import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5119_Helix_turn_helix,_arabinose_operon_control_protein,_and_Import_into_cell


id: CL:5122
description: Transcription regulator HTH, AraC- type, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5122_Transcription_regulator_HTH,_AraC-_type,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:5123
description: Transcription regulator HTH, AraC- type, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5123_Transcription_regulator_HTH,_AraC-_type,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:5139
description: Cupin domain, and RmlC-like cupin domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5139_Cupin_domain,_and_RmlC-like_cupin_domain_superfamily


id: CL:5157
description: SnoaL-like domain, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5157_SnoaL-like_domain,_and_KR_domain


id: CL:5166
description: Mixed, incl. Galactose metabolism, and Lectin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5166_Mixed,_incl._Galactose_metabolism,_and_Lectin


id: CL:5167
description: Mixed, incl. Lectin, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5167_Mixed,_incl._Lectin,_and_Glyoxalase-like_domain


id: CL:5178
description: Mixed, incl. NAD-dependent epimerase/dehydratase, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5178_Mixed,_incl._NAD-dependent_epimerase/dehydratase,_and_Aldo/keto_reductase_family


id: CL:519
description: Mixed, incl. Cell morphogenesis, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:519_Mixed,_incl._Cell_morphogenesis,_and_Cell_cycle_protein


id: CL:5199
description: Mixed, incl. Amine oxidase, and AAA ATPase, AAA+ lid domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5199_Mixed,_incl._Amine_oxidase,_and_AAA_ATPase,_AAA+_lid_domain


id: CL:5210
description: Mixed, incl. Potassium ion transport, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5210_Mixed,_incl._Potassium_ion_transport,_and_Peptidase_M3A/M3B


id: CL:5212
description: Mixed, incl. Potassium ion transport, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5212_Mixed,_incl._Potassium_ion_transport,_and_Peptidase_M3A/M3B


id: CL:5214
description: Mixed, incl. Peptidase M3A/M3B, and Linoleic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5214_Mixed,_incl._Peptidase_M3A/M3B,_and_Linoleic_acid_metabolism


id: CL:5239
description: Mostly uncharacterized, incl. SnoaL-like domain, and RmlC-like cupin domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5239_Mostly_uncharacterized,_incl._SnoaL-like_domain,_and_RmlC-like_cupin_domain_superfamily


id: CL:5240
description: Mixed, incl. SnoaL-like domain, and ICL/PEPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5240_Mixed,_incl._SnoaL-like_domain,_and_ICL/PEPM_domain


id: CL:5242
description: Mixed, incl. ICL/PEPM domain, and 6-O-methylguanine DNA methyltransferase, DNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5242_Mixed,_incl._ICL/PEPM_domain,_and_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: CL:5263
description: Mixed, incl. Sodium ion transport, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5263_Mixed,_incl._Sodium_ion_transport,_and_DSBA-like_thioredoxin_domain


id: CL:5280
description: Mixed, incl. Response to toxic substance, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5280_Mixed,_incl._Response_to_toxic_substance,_and_Acetyltransferase_(GNAT)_family


id: CL:5281
description: Mostly uncharacterized, incl. YCII-related, and Endomembrane system
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5281_Mostly_uncharacterized,_incl._YCII-related,_and_Endomembrane_system


id: CL:5283
description: Mixed, incl. YCII-related, and Bleomycin resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5283_Mixed,_incl._YCII-related,_and_Bleomycin_resistance_protein


id: CL:5295
description: Mixed, incl. DNA-binding HTH domain, TetR-type, conserved site, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5295_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_conserved_site,_and_EamA_domain


id: CL:5306
description: Mixed, incl. AhpD-like, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5306_Mixed,_incl._AhpD-like,_and_Acetyltransferase_(GNAT)_family


id: CL:5308
description: Mixed, incl. Regulatory factor, effector binding domain superfamily, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5308_Mixed,_incl._Regulatory_factor,_effector_binding_domain_superfamily,_and_AhpD-like


id: CL:532
description: Mixed, incl. D-Ala-D-Ala carboxypeptidase 3 (S13) family, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:532_Mixed,_incl._D-Ala-D-Ala_carboxypeptidase_3_(S13)_family,_and_Aquaporin-like


id: CL:5320
description: Mixed, incl. NADH:quinone oxidoreductase, FMN-dependent, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5320_Mixed,_incl._NADH:quinone_oxidoreductase,_FMN-dependent,_and_AhpD-like


id: CL:5329
description: Mostly uncharacterized, incl. START-like domain superfamily, and Nuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5329_Mostly_uncharacterized,_incl._START-like_domain_superfamily,_and_Nuclease_activity


id: CL:5330
description: Mostly uncharacterized, incl. START-like domain superfamily, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5330_Mostly_uncharacterized,_incl._START-like_domain_superfamily,_and_PhnB-like


id: CL:5331
description: Mixed, incl. START-like domain superfamily, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5331_Mixed,_incl._START-like_domain_superfamily,_and_PhnB-like


id: CL:5333
description: Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5333_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_PhnB-like


id: CL:5337
description: Activator of Hsp90 ATPase homolog 1-like protein, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5337_Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_PhnB-like


id: CL:5354
description: Mixed, incl. DinB family, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5354_Mixed,_incl._DinB_family,_and_WYL_domain


id: CL:5379
description: Mixed, incl. Peptidase M3A/M3B, and Calcineurin-like phosphoesterase domain, lpxH-type
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5379_Mixed,_incl._Peptidase_M3A/M3B,_and_Calcineurin-like_phosphoesterase_domain,_lpxH-type


id: CL:5390
description: Mostly uncharacterized, incl. Ion channel, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5390_Mostly_uncharacterized,_incl._Ion_channel,_and_Transposase_activity


id: CL:5391
description: Mixed, incl. Transposase activity, and CocE/Serine esterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5391_Mixed,_incl._Transposase_activity,_and_CocE/Serine_esterase


id: CL:5393
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5393_Mixed,_incl._Voltage-gated_channel_activity,_and_Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal

description:
  Mixed, incl. Voltage-gated channel activity, and Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal


id: CL:5409
description: Transposase activity, and CocE/Serine esterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5409_Transposase_activity,_and_CocE/Serine_esterase


id: CL:5418
description: Mostly uncharacterized, incl. Potassium channel domain, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5418_Mostly_uncharacterized,_incl._Potassium_channel_domain,_and_Exoribonuclease_activity


id: CL:5421
description: Mixed, incl. Potassium channel domain, and Bestrophin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5421_Mixed,_incl._Potassium_channel_domain,_and_Bestrophin-like


id: CL:5441
description: Mostly uncharacterized, incl. TerD domain, and Protein of unknown function DUF4870
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5441_Mostly_uncharacterized,_incl._TerD_domain,_and_Protein_of_unknown_function_DUF4870


id: CL:5442
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5442_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF4870,_and_Ubiquitin-protein_transferase_activity

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF4870, and Ubiquitin-protein transferase activity


id: CL:5443
description: Mixed, incl. Protein of unknown function DUF4870, and Protein of unknown function DUF2490
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5443_Mixed,_incl._Protein_of_unknown_function_DUF4870,_and_Protein_of_unknown_function_DUF2490


id: CL:5444
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5444_Mixed,_incl._Protein_of_unknown_function_DUF2490,_and_Transcription_regulator_Rrf2-type,_conserved_site

description:
  Mixed, incl. Protein of unknown function DUF2490, and Transcription regulator Rrf2-type, conserved site


id: CL:5456
description: Mixed, incl. Protein of unknown function DUF4870, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5456_Mixed,_incl._Protein_of_unknown_function_DUF4870,_and_EamA_domain


id: CL:5469
description: Ubiquitin-protein transferase activity, and Surface antigen D15-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5469_Ubiquitin-protein_transferase_activity,_and_Surface_antigen_D15-like


id: CL:5483
description: Mixed, incl. TerD domain, and Domain of unknown function DUF6268
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5483_Mixed,_incl._TerD_domain,_and_Domain_of_unknown_function_DUF6268


id: CL:5485
description: TerD domain, and Cellular response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5485_TerD_domain,_and_Cellular_response_to_abiotic_stimulus


id: CL:5495
description: Mixed, incl. Domain of unknown function DUF6268, and HAD hydrolase, subfamily IA
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5495_Mixed,_incl._Domain_of_unknown_function_DUF6268,_and_HAD_hydrolase,_subfamily_IA


id: CL:5504
description: Mixed, incl. Formate metabolic process, and Acetylxylan esterase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5504_Mixed,_incl._Formate_metabolic_process,_and_Acetylxylan_esterase_activity


id: CL:5507
description: Formate metabolic process, and Amidohydrolase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5507_Formate_metabolic_process,_and_Amidohydrolase-related


id: CL:5525
description: Mixed, incl. DinB superfamily, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5525_Mixed,_incl._DinB_superfamily,_and_Acetyltransferase_(GNAT)_domain


id: CL:5537
description: Mostly uncharacterized, incl. Calcium ion transport, and Protein of unknown function (DUF1003)
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5537_Mostly_uncharacterized,_incl._Calcium_ion_transport,_and_Protein_of_unknown_function_(DUF1003)


id: CL:5538
description: Mostly uncharacterized, incl. Calcium ion transport, and Protein of unknown function (DUF1003)
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5538_Mostly_uncharacterized,_incl._Calcium_ion_transport,_and_Protein_of_unknown_function_(DUF1003)


id: CL:5539
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5539_Mixed,_incl._HTH_domain_AraC-type,_conserved_site,_and_Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily

description:
  Mixed, incl. HTH domain AraC-type, conserved site, and Glycosyl hydrolase, five-bladed beta-propellor domain superfamily


id: CL:5551
description: Mixed, incl. Calcium ion transport, and Protein of unknown function (DUF1003)
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5551_Mixed,_incl._Calcium_ion_transport,_and_Protein_of_unknown_function_(DUF1003)


id: CL:5562
description: Mixed, incl. DNA alkylation repair enzyme, and Protein transport by the Sec complex
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5562_Mixed,_incl._DNA_alkylation_repair_enzyme,_and_Protein_transport_by_the_Sec_complex


id: CL:5576
description: Mostly uncharacterized, incl. OsmC/Ohr family, and Negative regulation of biological process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5576_Mostly_uncharacterized,_incl._OsmC/Ohr_family,_and_Negative_regulation_of_biological_process


id: CL:5577
description: Mostly uncharacterized, incl. GIY-YIG endonuclease, and Negative regulation of biological process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5577_Mostly_uncharacterized,_incl._GIY-YIG_endonuclease,_and_Negative_regulation_of_biological_process


id: CL:5579
description: Mostly uncharacterized, incl. ArsC family, and Organic hydroperoxide resistance protein famiy
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5579_Mostly_uncharacterized,_incl._ArsC_family,_and_Organic_hydroperoxide_resistance_protein_famiy


id: CL:558
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:558_Mostly_uncharacterized,_incl._rRNA_(cytosine)_methyltransferase_activity,_and_Oxygen-insensitive_NAD(P)H_nitroreductase_NfsB-like

description:
  Mostly uncharacterized, incl. rRNA (cytosine) methyltransferase activity, and Oxygen-insensitive NAD(P)H nitroreductase NfsB-like


id: CL:5581
description: Mixed, incl. ArsC family, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5581_Mixed,_incl._ArsC_family,_and_Regulation_of_growth


id: CL:560
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:560_Mixed,_incl._Oxygen-insensitive_NAD(P)H_nitroreductase_NfsB-like,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_domain_superfamily

description:
  Mixed, incl. Oxygen-insensitive NAD(P)H nitroreductase NfsB-like, and Toxin-antitoxin system, RelE/ParE toxin domain superfamily


id: CL:5600
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5600_Mixed,_incl._Organic_hydroperoxide_resistance_protein_famiy,_and_Transcription_regulators_MarR/SlyA-like

description:
  Mixed, incl. Organic hydroperoxide resistance protein famiy, and Transcription regulators MarR/SlyA-like


id: CL:5617
description: Mixed, incl. GIY-YIG endonuclease, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5617_Mixed,_incl._GIY-YIG_endonuclease,_and_Methyltransferase_small_domain


id: CL:5619
description: Mixed, incl. GIY-YIG endonuclease, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5619_Mixed,_incl._GIY-YIG_endonuclease,_and_Methyltransferase_small_domain


id: CL:5638
description: Mixed, incl. Polyphosphate kinase activity, and DNA-binding protein Dps
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5638_Mixed,_incl._Polyphosphate_kinase_activity,_and_DNA-binding_protein_Dps


id: CL:5641
description: DNA-binding protein Dps, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5641_DNA-binding_protein_Dps,_and_Chaperone_binding


id: CL:5657
description: Mixed, incl. Polyphosphate kinase activity, and Domain of unknown function (DUF3244)
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5657_Mixed,_incl._Polyphosphate_kinase_activity,_and_Domain_of_unknown_function_(DUF3244)


id: CL:5673
description: Mixed, incl. Aminopeptidase activity, and POT family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5673_Mixed,_incl._Aminopeptidase_activity,_and_POT_family


id: CL:5674
description: Mixed, incl. Aminopeptidase activity, and POT family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5674_Mixed,_incl._Aminopeptidase_activity,_and_POT_family


id: CL:5675
description: Mixed, incl. Aminopeptidase activity, and POT family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5675_Mixed,_incl._Aminopeptidase_activity,_and_POT_family


id: CL:5676
description: Mixed, incl. POT family, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5676_Mixed,_incl._POT_family,_and_Peptidase_M28


id: CL:5677
description: Mixed, incl. POT family, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5677_Mixed,_incl._POT_family,_and_Peptidase_M28


id: CL:5679
description: Mixed, incl. Peptidase M28, and POT family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5679_Mixed,_incl._Peptidase_M28,_and_POT_family


id: CL:5682
description: Peptidase M28, and Dienelactone hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5682_Peptidase_M28,_and_Dienelactone_hydrolase_family


id: CL:5707
description: Mixed, incl. DinB superfamily, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5707_Mixed,_incl._DinB_superfamily,_and_Coiled_coil


id: CL:5717
description: Mixed, incl. Peptidase S51, and Deoxyribose phosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5717_Mixed,_incl._Peptidase_S51,_and_Deoxyribose_phosphate_biosynthetic_process


id: CL:5732
description: Mixed, incl. Peptidase S46, and HslJ-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5732_Mixed,_incl._Peptidase_S46,_and_HslJ-like_superfamily


id: CL:5745
description: Mixed, incl. Methyladenine glycosylase, and Peptidase family M28
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5745_Mixed,_incl._Methyladenine_glycosylase,_and_Peptidase_family_M28


id: CL:5761
description: Mostly uncharacterized, incl. Globin/Protoglobin, and Potassium channel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5761_Mostly_uncharacterized,_incl._Globin/Protoglobin,_and_Potassium_channel_domain


id: CL:5763
description: Mixed, incl. O-methyltransferase activity, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5763_Mixed,_incl._O-methyltransferase_activity,_and_Rhodanese-like_domain


id: CL:5773
description: Mixed, incl. Globin/Protoglobin, and Potassium channel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5773_Mixed,_incl._Globin/Protoglobin,_and_Potassium_channel_domain


id: CL:5783
description: Mixed, incl. Hydrolase activity, acting on glycosyl bonds, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5783_Mixed,_incl._Hydrolase_activity,_acting_on_glycosyl_bonds,_and_Beta-lactamase


id: CL:5784
description: Mixed, incl. Hydrolase activity, acting on glycosyl bonds, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5784_Mixed,_incl._Hydrolase_activity,_acting_on_glycosyl_bonds,_and_Beta-lactamase


id: CL:5785
description: Mixed, incl. Glycosidase, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5785_Mixed,_incl._Glycosidase,_and_Beta-lactamase


id: CL:5786
description: Mixed, incl. Glycosidase, and Polysaccharide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5786_Mixed,_incl._Glycosidase,_and_Polysaccharide_catabolic_process


id: CL:5787
description: Mixed, incl. Glycosidase, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5787_Mixed,_incl._Glycosidase,_and_Six-hairpin_glycosidase_superfamily


id: CL:5788
description: Mixed, incl. Glycosidase, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5788_Mixed,_incl._Glycosidase,_and_Six-hairpin_glycosidase_superfamily


id: CL:5789
description: Mixed, incl. Pectin lyase fold, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5789_Mixed,_incl._Pectin_lyase_fold,_and_Sphingolipid_metabolism


id: CL:5790
description: Pectin lyase fold, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5790_Pectin_lyase_fold,_and_Sphingolipid_metabolism


id: CL:5792
description: Mixed, incl. Pectin lyase fold, and Rhamnogalacturonan acetylesterase RhgT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5792_Mixed,_incl._Pectin_lyase_fold,_and_Rhamnogalacturonan_acetylesterase_RhgT-like


id: CL:5794
description: Glycosyl hydrolases family 2, sugar binding domain, and Glycosyl Hydrolase Family 88
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5794_Glycosyl_hydrolases_family_2,_sugar_binding_domain,_and_Glycosyl_Hydrolase_Family_88


id: CL:580
description: Mixed, incl. Cell gliding, and Glycosyl transferase, family 51
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:580_Mixed,_incl._Cell_gliding,_and_Glycosyl_transferase,_family_51


id: CL:5810
description: Aspartyl esterase, and Rhamnogalacturonan acetylesterase RhgT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5810_Aspartyl_esterase,_and_Rhamnogalacturonan_acetylesterase_RhgT-like


id: CL:5831
description: Six-hairpin glycosidase-like superfamily, and Acetylxylan esterase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5831_Six-hairpin_glycosidase-like_superfamily,_and_Acetylxylan_esterase_activity


id: CL:5842
description: Glycosidase, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5842_Glycosidase,_and_Sialate_O-acetylesterase


id: CL:5843
description: Glycoside hydrolase, family 43, and Glycosyl hydrolase, all-beta
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5843_Glycoside_hydrolase,_family_43,_and_Glycosyl_hydrolase,_all-beta


id: CL:5845
description: Mixed, incl. Xylan metabolic process, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5845_Mixed,_incl._Xylan_metabolic_process,_and_Sialate_O-acetylesterase


id: CL:5861
description: Glycoside hydrolase, family 43, and Glycosyl hydrolase, all-beta
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5861_Glycoside_hydrolase,_family_43,_and_Glycosyl_hydrolase,_all-beta


id: CL:5874
description: Xylanase activity, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5874_Xylanase_activity,_and_Sialate_O-acetylesterase


id: CL:5887
description: Mixed, incl. Ig-like domain CHU_C associated, and Thioredoxin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5887_Mixed,_incl._Ig-like_domain_CHU_C_associated,_and_Thioredoxin-like


id: CL:5896
description: Mixed, incl. Toxin-antitoxin system, RelE/ParE toxin family, and Proteasome
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5896_Mixed,_incl._Toxin-antitoxin_system,_RelE/ParE_toxin_family,_and_Proteasome


id: CL:5899
description: Mixed, incl. Proteasome, and Predicted HD phosphohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5899_Mixed,_incl._Proteasome,_and_Predicted_HD_phosphohydrolase


id: CL:5925
description: Mixed, incl. Beta-lactamase, and Glycoside hydrolase, family 3, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5925_Mixed,_incl._Beta-lactamase,_and_Glycoside_hydrolase,_family_3,_N-terminal


id: CL:5926
description: Mixed, incl. Beta-lactamase, and Glycoside hydrolase, family 3, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5926_Mixed,_incl._Beta-lactamase,_and_Glycoside_hydrolase,_family_3,_N-terminal


id: CL:5928
description: Mixed, incl. Beta-lactamase, and Glycoside hydrolase, family 3, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5928_Mixed,_incl._Beta-lactamase,_and_Glycoside_hydrolase,_family_3,_N-terminal


id: CL:5929
description: Beta-lactamase, and Glycoside hydrolase, family 3, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5929_Beta-lactamase,_and_Glycoside_hydrolase,_family_3,_N-terminal


id: CL:5930
description: Beta-lactamase, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5930_Beta-lactamase,_and_NlpC/P60_family


id: CL:5948
description: Beta-lactamase, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5948_Beta-lactamase,_and_Glucose/Sorbosone_dehydrogenase


id: CL:5961
description: Fibronectin type III-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5961_Fibronectin_type_III-like_domain


id: CL:5977
description: Mixed, incl. AAA domain, and Bleomycin resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:5977_Mixed,_incl._AAA_domain,_and_Bleomycin_resistance_protein


id: CL:6002
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6002_Mixed,_incl._AraR-like,_winged_helix_DNA-binding_domain,_and_Glycosyl_hydrolase_family_3_C-terminal_domain

description:
  Mixed, incl. AraR-like, winged helix DNA-binding domain, and Glycosyl hydrolase family 3 C-terminal domain


id: CL:6016
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6016_Mostly_uncharacterized,_incl._Sigma_factor_activity,_and_Tumour_necrosis_factor-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Sigma factor activity, and Tumour necrosis factor-like domain superfamily


id: CL:6018
description: Mostly uncharacterized, incl. Pore complex, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6018_Mostly_uncharacterized,_incl._Pore_complex,_and_Arginine_biosynthesis


id: CL:6020
description: Mixed, incl. Pore complex, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6020_Mixed,_incl._Pore_complex,_and_Arginine_biosynthesis


id: CL:6021
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6021_Mostly_uncharacterized,_incl._MFS/sugar_transport_protein,_and_Cellular_response_to_abiotic_stimulus

description:
  Mostly uncharacterized, incl. MFS/sugar transport protein, and Cellular response to abiotic stimulus


id: CL:6023
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6023_Mixed,_incl._Regulator_of_chromosome_condensation_1/beta-lactamase-inhibitor_protein_II,_and_Peptidase_family_S41

description:
  Mixed, incl. Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II, and Peptidase family S41


id: CL:6033
description: Mixed, incl. MFS/sugar transport protein, and Cellular response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6033_Mixed,_incl._MFS/sugar_transport_protein,_and_Cellular_response_to_abiotic_stimulus


id: CL:6042
description: DNA alkylation repair enzyme, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6042_DNA_alkylation_repair_enzyme,_and_Arginine_biosynthesis


id: CL:605
description: Mostly uncharacterized, incl. AAA domain, group 15, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:605_Mostly_uncharacterized,_incl._AAA_domain,_group_15,_and_Nucleoside_recognition


id: CL:6056
description: Mixed, incl. Trp repressor/replication initiator, and Domain of unknown function DUF11
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6056_Mixed,_incl._Trp_repressor/replication_initiator,_and_Domain_of_unknown_function_DUF11


id: CL:6078
description: Mixed, incl. Sigma factor activity, and Tumour necrosis factor-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6078_Mixed,_incl._Sigma_factor_activity,_and_Tumour_necrosis_factor-like_domain_superfamily


id: CL:6079
description: Mixed, incl. Sigma factor activity, and AF2212/PG0164-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6079_Mixed,_incl._Sigma_factor_activity,_and_AF2212/PG0164-like_superfamily


id: CL:608
description: Mixed, incl. AAA domain, group 15, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:608_Mixed,_incl._AAA_domain,_group_15,_and_Polysaccharide_biosynthesis_protein


id: CL:6104
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6104_Mixed,_incl._Tumour_necrosis_factor-like_domain_superfamily,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mixed, incl. Tumour necrosis factor-like domain superfamily, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:6106
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6106_Tumour_necrosis_factor-like_domain_superfamily,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Tumour necrosis factor-like domain superfamily, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:6123
description: Mixed, incl. DNA-binding domain, and Domain of unknown function DUF11
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6123_Mixed,_incl._DNA-binding_domain,_and_Domain_of_unknown_function_DUF11


id: CL:6132
description: Mostly uncharacterized, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6132_Mostly_uncharacterized,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6133
description: Mostly uncharacterized, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6133_Mostly_uncharacterized,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6134
description: Mostly uncharacterized, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6134_Mostly_uncharacterized,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6135
description: Mixed, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6135_Mixed,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6136
description: Mixed, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6136_Mixed,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6137
description: Mixed, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6137_Mixed,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6140
description: Mixed, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6140_Mixed,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6143
description: Mixed, incl. Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6143_Mixed,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:6145
description: Mixed, incl. Secretion, and PKD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6145_Mixed,_incl._Secretion,_and_PKD_domain


id: CL:6189
description: Mixed, incl. Extracellular space, and Kelch-type beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6189_Mixed,_incl._Extracellular_space,_and_Kelch-type_beta_propeller


id: CL:6202
description: Mixed, incl. Domain of unknown function DUF11
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6202_Mixed,_incl._Domain_of_unknown_function_DUF11


id: CL:6212
description: Mixed, incl. TerB-like, and Protein of unknown function DUF6804
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6212_Mixed,_incl._TerB-like,_and_Protein_of_unknown_function_DUF6804


id: CL:6214
description: Mixed, incl. TerB-like, and Protein of unknown function DUF6804
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6214_Mixed,_incl._TerB-like,_and_Protein_of_unknown_function_DUF6804


id: CL:623
description: Mixed, incl. Nucleoside recognition, and Ferrous iron transporter, core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:623_Mixed,_incl._Nucleoside_recognition,_and_Ferrous_iron_transporter,_core_domain


id: CL:6232
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6232_Mostly_uncharacterized,_incl._Peptidase_S1,_PA_clan,_chymotrypsin-like_fold,_and_Isocitrate_dehydrogenase_NADP-dependent,_monomeric

description:
  Mostly uncharacterized, incl. Peptidase S1, PA clan, chymotrypsin-like fold, and Isocitrate dehydrogenase NADP-dependent, monomeric


id: CL:6233
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6233_Mixed,_incl._Peptidase_S1,_PA_clan,_chymotrypsin-like_fold,_and_Regulator_of_chromosome_condensation_1/beta-lactamase-inhibitor_protein_II

description:
  Mixed, incl. Peptidase S1, PA clan, chymotrypsin-like fold, and Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


id: CL:6244
description: Mixed, incl. Isocitrate dehydrogenase NADP-dependent, monomeric, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6244_Mixed,_incl._Isocitrate_dehydrogenase_NADP-dependent,_monomeric,_and_Electron_transfer_activity


id: CL:6255
description: Mixed, incl. AAA domain, and Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6255_Mixed,_incl._AAA_domain,_and_Beta-lactamase/transpeptidase-like


id: CL:6271
description: Mixed, incl. Lysozyme-like domain superfamily, and Lysozyme activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6271_Mixed,_incl._Lysozyme-like_domain_superfamily,_and_Lysozyme_activity


id: CL:6272
description: Mixed, incl. Lysozyme-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6272_Mixed,_incl._Lysozyme-like_domain_superfamily


id: CL:6283
description: Mixed, incl. Lysozyme activity, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6283_Mixed,_incl._Lysozyme_activity,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:6295
description: Mixed, incl. Endopeptidase activity, and Salmonella virulence plasmid 65kDa B protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6295_Mixed,_incl._Endopeptidase_activity,_and_Salmonella_virulence_plasmid_65kDa_B_protein


id: CL:6297
description: Mixed, incl. Aromatic amino acid beta-eliminating lyase/threonine aldolase, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6297_Mixed,_incl._Aromatic_amino_acid_beta-eliminating_lyase/threonine_aldolase,_and_Rhomboid_family


id: CL:6317
description: Mixed, incl. Salmonella virulence plasmid 65kDa B protein, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6317_Mixed,_incl._Salmonella_virulence_plasmid_65kDa_B_protein,_and_Sugar_(and_other)_transporter


id: CL:6328
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6328_Mostly_uncharacterized,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Mostly uncharacterized, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: CL:6329
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6329_Mostly_uncharacterized,_incl._Yjdj-type_Gcn5-related_N-acetyltransferase,_and_Steroid_hydroxylase_activity

description:
  Mostly uncharacterized, incl. Yjdj-type Gcn5-related N-acetyltransferase, and Steroid hydroxylase activity


id: CL:6330
description: Mixed, incl. Yjdj-type Gcn5-related N-acetyltransferase, and Steroid hydroxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6330_Mixed,_incl._Yjdj-type_Gcn5-related_N-acetyltransferase,_and_Steroid_hydroxylase_activity


id: CL:6332
description: Mixed, incl. Yjdj-type Gcn5-related N-acetyltransferase, and Steroid hydroxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6332_Mixed,_incl._Yjdj-type_Gcn5-related_N-acetyltransferase,_and_Steroid_hydroxylase_activity


id: CL:6334
description: Steroid hydroxylase activity, and Biosynthesis of various secondary metabolites - part 2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6334_Steroid_hydroxylase_activity,_and_Biosynthesis_of_various_secondary_metabolites_-_part_2


id: CL:634
description: Mixed, incl. Enoyl-(Acyl carrier protein) reductase, and JmjC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:634_Mixed,_incl._Enoyl-(Acyl_carrier_protein)_reductase,_and_JmjC_domain


id: CL:6347
description: Gcn5-related N-acetyltransferase, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6347_Gcn5-related_N-acetyltransferase,_and_NADPH-dependent_FMN_reductase-like


id: CL:637
description: Enoyl-(Acyl carrier protein) reductase, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:637_Enoyl-(Acyl_carrier_protein)_reductase,_and_FAD_binding_domain


id: CL:6374
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6374_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Outer_membrane_protein_beta-barrel_domain_3

description:
  Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Outer membrane protein beta-barrel domain 3


id: CL:6388
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6388_Mixed,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Luciferase-like_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Luciferase-like domain


id: CL:6389
description: Mixed, incl. Styrene degradation, and Luciferase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6389_Mixed,_incl._Styrene_degradation,_and_Luciferase-like_domain


id: CL:6391
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6391_Mixed,_incl._Styrene_degradation,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Mixed, incl. Styrene degradation, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:6404
description: Luciferase-like domain, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6404_Luciferase-like_domain,_and_NADPH-dependent_FMN_reductase-like


id: CL:6416
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6416_Mixed,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Uracil_DNA_N-glycosylase_activity

description:
  Mixed, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Uracil DNA N-glycosylase activity


id: CL:6418
description: Mixed, incl. Uracil DNA N-glycosylase activity, and Protein of unknown function DUF6597
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6418_Mixed,_incl._Uracil_DNA_N-glycosylase_activity,_and_Protein_of_unknown_function_DUF6597


id: CL:6439
description: Mixed, incl. DNA metabolic process, and Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6439_Mixed,_incl._DNA_metabolic_process,_and_Rhs_repeat-associated_core


id: CL:6440
description: Mixed, incl. Rhs repeat-associated core, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6440_Mixed,_incl._Rhs_repeat-associated_core,_and_DNA_metabolic_process


id: CL:6441
description: Mixed, incl. Rhs repeat-associated core, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6441_Mixed,_incl._Rhs_repeat-associated_core,_and_DNA_metabolic_process


id: CL:6442
description: Mixed, incl. DNA modification, and Helix-turn-helix domain, group 17
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6442_Mixed,_incl._DNA_modification,_and_Helix-turn-helix_domain,_group_17


id: CL:6444
description: Mixed, incl. Helix-turn-helix domain, group 17, and Organelle organization
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6444_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_Organelle_organization


id: CL:6446
description: Mixed, incl. Helix-turn-helix domain, group 17, and Organelle organization
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6446_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_Organelle_organization


id: CL:6449
description: Mixed, incl. Helix-turn-helix domain, group 17, and Exodeoxyribonuclease V complex
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6449_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_Exodeoxyribonuclease_V_complex


id: CL:6451
description: Mostly uncharacterized, incl. MobC-like protein, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6451_Mostly_uncharacterized,_incl._MobC-like_protein,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:6453
description: Mostly uncharacterized, incl. Helix-turn-helix domain, group 17, and MobC-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6453_Mostly_uncharacterized,_incl._Helix-turn-helix_domain,_group_17,_and_MobC-like_protein


id: CL:6456
description: Mostly uncharacterized, incl. Cell projection organization, and Protein of unknown function DUF3408
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6456_Mostly_uncharacterized,_incl._Cell_projection_organization,_and_Protein_of_unknown_function_DUF3408


id: CL:6458
description: Mixed, incl. Cell projection organization, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6458_Mixed,_incl._Cell_projection_organization,_and_Quorum_sensing


id: CL:6500
description: Helix-turn-helix domain, and Topoisomerase C-terminal repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6500_Helix-turn-helix_domain,_and_Topoisomerase_C-terminal_repeat


id: CL:6526
description: Mostly uncharacterized, incl. DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6526_Mostly_uncharacterized,_incl._DNA_integration


id: CL:655
description: Mostly uncharacterized, incl. ATPase, AAA-3, and Domain of unknown function DUF58
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:655_Mostly_uncharacterized,_incl._ATPase,_AAA-3,_and_Domain_of_unknown_function_DUF58


id: CL:6555
description: Mixed, incl. Rhs repeat-associated core, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6555_Mixed,_incl._Rhs_repeat-associated_core,_and_Serine-type_endopeptidase_activity


id: CL:6557
description: Mixed, incl. Rhs repeat-associated core, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6557_Mixed,_incl._Rhs_repeat-associated_core,_and_Serine-type_endopeptidase_activity


id: CL:6558
description: Mixed, incl. Rhs repeat-associated core, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6558_Mixed,_incl._Rhs_repeat-associated_core,_and_Regulation_of_translation


id: CL:6559
description: Mixed, incl. Rhs repeat-associated core, and Bacterial DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6559_Mixed,_incl._Rhs_repeat-associated_core,_and_Bacterial_DNA-binding_protein


id: CL:6561
description: Mixed, incl. Rhs repeat-associated core, and Bacterial DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6561_Mixed,_incl._Rhs_repeat-associated_core,_and_Bacterial_DNA-binding_protein


id: CL:6563
description: Mixed, incl. Salmonella virulence plasmid 65kDa B protein, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6563_Mixed,_incl._Salmonella_virulence_plasmid_65kDa_B_protein,_and_Subtilase_family


id: CL:657
description: Mixed, incl. TRAM domain, and Peptidase family S41
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:657_Mixed,_incl._TRAM_domain,_and_Peptidase_family_S41


id: CL:6585
description: Mixed, incl. Rhs repeat-associated core, and Plant-pathogen interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6585_Mixed,_incl._Rhs_repeat-associated_core,_and_Plant-pathogen_interaction


id: CL:6587
description: Mixed, incl. Plant-pathogen interaction, and 23S rRNA-intervening sequence protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6587_Mixed,_incl._Plant-pathogen_interaction,_and_23S_rRNA-intervening_sequence_protein


id: CL:6599
description: Mixed, incl. Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6599_Mixed,_incl._Rhs_repeat-associated_core


id: CL:6609
description: Mixed, incl. Rhs repeat-associated core, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6609_Mixed,_incl._Rhs_repeat-associated_core,_and_Quorum_sensing


id: CL:6626
description: Mixed, incl. Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6626_Mixed,_incl._Rhs_repeat-associated_core


id: CL:6646
description: Mixed, incl. ParB/Sulfiredoxin superfamily, and Iron ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6646_Mixed,_incl._ParB/Sulfiredoxin_superfamily,_and_Iron_ion_binding


id: CL:6658
description: Mostly uncharacterized, incl. Phage integrase SAM-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6658_Mostly_uncharacterized,_incl._Phage_integrase_SAM-like_domain


id: CL:6671
description: Mostly uncharacterized, incl. Mismatch repair, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6671_Mostly_uncharacterized,_incl._Mismatch_repair,_and_Fido_domain


id: CL:6673
description: Mostly uncharacterized, incl. Mismatch repair, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6673_Mostly_uncharacterized,_incl._Mismatch_repair,_and_Fido_domain


id: CL:6674
description: Mixed, incl. Mismatch repair, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6674_Mixed,_incl._Mismatch_repair,_and_Fido_domain


id: CL:6679
description: Mixed, incl. Mismatch repair complex, and C-5 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6679_Mixed,_incl._Mismatch_repair_complex,_and_C-5_methylation_of_cytosine


id: CL:6693
description: Mixed, incl. Integrase activity, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6693_Mixed,_incl._Integrase_activity,_and_Helix-turn-helix_domain


id: CL:6709
description: Mixed, incl. Fido domain, and UPF0759 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6709_Mixed,_incl._Fido_domain,_and_UPF0759_superfamily


id: CL:6722
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6722_Mixed,_incl._Integration_host_factor_(IHF)-like_DNA-binding_domain_superfamily,_and_Domain_of_unknown_function_DUF6705

description:
  Mixed, incl. Integration host factor (IHF)-like DNA-binding domain superfamily, and Domain of unknown function DUF6705


id: CL:6723
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6723_Mixed,_incl._Integration_host_factor_(IHF)-like_DNA-binding_domain_superfamily,_and_Protein_of_unknown_function_DUF6702

description:
  Mixed, incl. Integration host factor (IHF)-like DNA-binding domain superfamily, and Protein of unknown function DUF6702


id: CL:6725
description: Mixed, incl. Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6725_Mixed,_incl._Transmembrane_helix


id: CL:674
description: Mixed, incl. Domain of unknown function DUF58, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:674_Mixed,_incl._Domain_of_unknown_function_DUF58,_and_Sporulation


id: CL:6751
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6751_Mixed,_incl._Integration_host_factor_(IHF)-like_DNA-binding_domain_superfamily,_and_Protein_of_unknown_function_DUF6702

description:
  Mixed, incl. Integration host factor (IHF)-like DNA-binding domain superfamily, and Protein of unknown function DUF6702


id: CL:6752
description: Histone-like DNA-binding protein, and Protein of unknown function DUF6702
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6752_Histone-like_DNA-binding_protein,_and_Protein_of_unknown_function_DUF6702


id: CL:6763
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6763_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_HU_domain_fused_to_wHTH,_Ig,_or_Glycine-rich_motif

description:
  Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and HU domain fused to wHTH, Ig, or Glycine-rich motif


id: CL:6773
description: Domain of unknown function DUF6705, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6773_Domain_of_unknown_function_DUF6705,_and_Response_to_host


id: CL:6783
description: Mixed, incl. Phosphorelay signal transduction system, and Protein of unknown function DUF6759
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6783_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Protein_of_unknown_function_DUF6759


id: CL:6786
description: Phosphorelay signal transduction system, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6786_Phosphorelay_signal_transduction_system,_and_DUF218_domain


id: CL:6787
description: Phosphorelay signal transduction system, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6787_Phosphorelay_signal_transduction_system,_and_LysR,_substrate-binding


id: CL:6788
description: LytTR DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6788_LytTR_DNA-binding_domain,_and_Histidine_kinase


id: CL:6789
description: Histidine kinase, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6789_Histidine_kinase,_and_LytTR_DNA-binding_domain


id: CL:6790
description: Histidine kinase, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6790_Histidine_kinase,_and_LytTR_DNA-binding_domain


id: CL:6791
description: Histidine kinase, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6791_Histidine_kinase,_and_LytTR_DNA-binding_domain


id: CL:6794
description: Histidine kinase, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6794_Histidine_kinase,_and_LytTR_DNA-binding_domain


id: CL:6797
description: Transcriptional regulatory protein LytR-like, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6797_Transcriptional_regulatory_protein_LytR-like,_and_Histidine_kinase


id: CL:6799
description: Histidine kinase, and Signal transduction response regulator, citrate/malate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6799_Histidine_kinase,_and_Signal_transduction_response_regulator,_citrate/malate_metabolism


id: CL:6849
description: Mixed, incl. Phosphotransferase system (PTS), and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6849_Mixed,_incl._Phosphotransferase_system_(PTS),_and_Histidine_kinase


id: CL:6858
description: Mixed, incl. Protein serine/threonine kinase activity, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6858_Mixed,_incl._Protein_serine/threonine_kinase_activity,_and_Bacterial_chemotaxis


id: CL:686
description: Mixed, incl. Isoprenoid metabolic process, and Winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:686_Mixed,_incl._Isoprenoid_metabolic_process,_and_Winged_helix_DNA-binding_domain


id: CL:6867
description: Mixed, incl. LysR, substrate-binding, and Haem-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6867_Mixed,_incl._LysR,_substrate-binding,_and_Haem-binding_domain


id: CL:687
description: Mixed, incl. Isoprenoid metabolic process, and Winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:687_Mixed,_incl._Isoprenoid_metabolic_process,_and_Winged_helix_DNA-binding_domain


id: CL:6876
description: Mixed, incl. DUF218 domain, and tryptophan-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6876_Mixed,_incl._DUF218_domain,_and_tryptophan-tRNA_ligase_activity


id: CL:688
description: Isoprenoid biosynthetic process, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:688_Isoprenoid_biosynthetic_process,_and_Carotenoid_biosynthesis


id: CL:6889
description: Mixed, incl. Protein of unknown function DUF6759, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6889_Mixed,_incl._Protein_of_unknown_function_DUF6759,_and_NIL_domain


id: CL:6891
description: Mixed, incl. ArsC family, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6891_Mixed,_incl._ArsC_family,_and_DSBA-like_thioredoxin_domain


id: CL:6907
description: Protein of unknown function DUF6759, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6907_Protein_of_unknown_function_DUF6759,_and_RNA_(guanine-N7)-methylation


id: CL:6918
description: Mixed, incl. Carbonic anhydrase, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6918_Mixed,_incl._Carbonic_anhydrase,_and_Sulfate_transport


id: CL:6934
description: Mixed, incl. Regulation of molecular function, and Zinc carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6934_Mixed,_incl._Regulation_of_molecular_function,_and_Zinc_carboxypeptidase


id: CL:6937
description: Mixed, incl. Positive regulation of molecular function, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6937_Mixed,_incl._Positive_regulation_of_molecular_function,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:6951
description: Mixed, incl. Zinc carboxypeptidase, and Regulation of hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6951_Mixed,_incl._Zinc_carboxypeptidase,_and_Regulation_of_hydrolase_activity


id: CL:6971
description: Mixed, incl. Protein of unknown function DUF421, and Domain of unknown function DUF4440
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6971_Mixed,_incl._Protein_of_unknown_function_DUF421,_and_Domain_of_unknown_function_DUF4440


id: CL:6986
description: Mixed, incl. Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:6986_Mixed,_incl._Homeobox-like_domain_superfamily


id: CL:7000
description: Mixed, incl. Helix-turn-helix, HxlR type, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:7000_Mixed,_incl._Helix-turn-helix,_HxlR_type,_and_Lipid_catabolic_process


id: CL:7001
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:7001_Mostly_uncharacterized,_incl._Linoleic_acid_metabolism,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. Linoleic acid metabolism, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:7003
description: Mostly uncharacterized, incl. 6-phosphogluconolactonase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:7003_Mostly_uncharacterized,_incl._6-phosphogluconolactonase_activity


id: CL:7084
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:7084_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:7085
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:7085_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Coiled_coil


id: CL:718
description: Mixed, incl. Sigma-70, region 4, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:718_Mixed,_incl._Sigma-70,_region_4,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:734
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:734_Mixed,_incl._C-methyltransferase_activity,_and_DNA_polymerase_III,_clamp_loader_complex,_gamma/delta/delta_subunit,_C-terminal

description:
  Mixed, incl. C-methyltransferase activity, and DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal


id: CL:745
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:745_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Phospholipid_transport


id: CL:746
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:746_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Phospholipid_transport


id: CL:748
description: Mixed, incl. Lipid A biosynthesis, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:748_Mixed,_incl._Lipid_A_biosynthesis,_and_Phospholipid_transport


id: CL:750
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:750_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:76
description: Mixed, incl. Membrane, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:76_Mixed,_incl._Membrane,_and_GLPGLI_family_protein


id: CL:77
description: Mixed, incl. Macromolecule localization, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:77_Mixed,_incl._Macromolecule_localization,_and_Signal


id: CL:778
description: Phospholipid transport, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:778_Phospholipid_transport,_and_Lipid_transport


id: CL:78
description: Mixed, incl. Macromolecule localization, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:78_Mixed,_incl._Macromolecule_localization,_and_Signal


id: CL:799
description: Mixed, incl. UspA, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:799_Mixed,_incl._UspA,_and_BON_domain


id: CL:80
description: Mixed, incl. Macromolecule localization, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:80_Mixed,_incl._Macromolecule_localization,_and_Signal


id: CL:81
description: Mixed, incl. Macromolecule localization, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:81_Mixed,_incl._Macromolecule_localization,_and_Signal


id: CL:810
description: Mixed, incl. Phospholipid metabolic process, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:810_Mixed,_incl._Phospholipid_metabolic_process,_and_Sulfatase


id: CL:811
description: Mixed, incl. Phospholipid metabolic process, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:811_Mixed,_incl._Phospholipid_metabolic_process,_and_Sulfatase


id: CL:813
description: Phospholipid metabolic process, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:813_Phospholipid_metabolic_process,_and_Sulfatase


id: CL:815
description: Mixed, incl. Phospholipid metabolism, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:815_Mixed,_incl._Phospholipid_metabolism,_and_CDP-alcohol_phosphatidyltransferase


id: CL:83
description: Mixed, incl. Macromolecule localization, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:83_Mixed,_incl._Macromolecule_localization,_and_Intrinsic_component_of_membrane


id: CL:84
description: Mostly uncharacterized, incl. Envelope, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:84_Mostly_uncharacterized,_incl._Envelope,_and_GLPGLI_family_protein


id: CL:852
description: Mixed, incl. Outer membrane protein beta-barrel domain, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:852_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_Acid_phosphatase_homologues


id: CL:86
description: Mostly uncharacterized, incl. Envelope, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:86_Mostly_uncharacterized,_incl._Envelope,_and_GLPGLI_family_protein


id: CL:863
description: Mostly uncharacterized, incl. Cytolysis, and Cell gliding
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:863_Mostly_uncharacterized,_incl._Cytolysis,_and_Cell_gliding


id: CL:865
description: Mixed, incl. Cell gliding, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:865_Mixed,_incl._Cell_gliding,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:87
description: Mostly uncharacterized, incl. Envelope, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:87_Mostly_uncharacterized,_incl._Envelope,_and_GLPGLI_family_protein


id: CL:88
description: Mixed, incl. Envelope, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:88_Mixed,_incl._Envelope,_and_GLPGLI_family_protein


id: CL:890
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:890_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. Secretion system C-terminal sorting domain, and Tetratricopeptide-like helical domain superfamily


id: CL:891
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:891_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. Secretion system C-terminal sorting domain, and Tetratricopeptide-like helical domain superfamily


id: CL:893
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:893_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
[cell repeats an earlier one in this file: 110 characters]


id: CL:894
description: Mixed, incl. Secretion system C-terminal sorting domain, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:894_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_ABC-type_transporter_activity


id: CL:895
description: Secretion system C-terminal sorting domain, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:895_Secretion_system_C-terminal_sorting_domain,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:896
description: Secretion system C-terminal sorting domain, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:896_Secretion_system_C-terminal_sorting_domain,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:897
description: Secretion system C-terminal sorting domain, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:897_Secretion_system_C-terminal_sorting_domain,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:899
description: Secretion system C-terminal sorting domain, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:899_Secretion_system_C-terminal_sorting_domain,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:90
description: Mostly uncharacterized, incl. Envelope, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:90_Mostly_uncharacterized,_incl._Envelope,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:901
description: Secretion system C-terminal sorting domain, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:901_Secretion_system_C-terminal_sorting_domain,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:903
description: Secretion system C-terminal sorting domain, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:903_Secretion_system_C-terminal_sorting_domain,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:905
description: Secretion system C-terminal sorting domain, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:905_Secretion_system_C-terminal_sorting_domain,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:907
description: Mixed, incl. Fibronectin type III superfamily, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:907_Mixed,_incl._Fibronectin_type_III_superfamily,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:909
description: Mixed, incl. Evasion of host immune response, and Ig-like domain CHU_C associated
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:909_Mixed,_incl._Evasion_of_host_immune_response,_and_Ig-like_domain_CHU_C_associated


id: CL:91
description: Mixed, incl. Envelope, and Putative auto-transporter adhesin, head GIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:91_Mixed,_incl._Envelope,_and_Putative_auto-transporter_adhesin,_head_GIN_domain


id: CL:928
description: Mixed, incl. Peptidoglycan glycosyltransferase activity, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:928_Mixed,_incl._Peptidoglycan_glycosyltransferase_activity,_and_Gingipain


id: CL:94
description: Mixed, incl. Envelope, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:94_Mixed,_incl._Envelope,_and_Thioredoxin-like_fold


id: CL:949
description: Mixed, incl. Cleaved adhesin, and HYR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:949_Mixed,_incl._Cleaved_adhesin,_and_HYR_domain


id: CL:951
description: Mixed, incl. HYR domain, and Cleaved adhesin
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:951_Mixed,_incl._HYR_domain,_and_Cleaved_adhesin


id: CL:96
description: Mixed, incl. Cell envelope, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:96_Mixed,_incl._Cell_envelope,_and_Integral_component_of_plasma_membrane


id: CL:97
description: Mixed, incl. Cell envelope, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:97_Mixed,_incl._Cell_envelope,_and_LysM_domain


id: CL:987
description: Delta-60 repeat, and ELWxxDGT repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_454006_STRINGid_CL:987_Delta-60_repeat,_and_ELWxxDGT_repeat


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 5
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010142
description: Farnesyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0010142
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0010142_Farnesyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 12
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019379
memo: https://amigo.geneontology.org/amigo/term/GO:0019379
golevel: 5
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0019379_Sulfate_assimilation,_phosphoadenylyl_sulfate_reduction_by_phosphoadenylyl-sulfate_reductase_(thioredoxin)

description:
  Sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_454006_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_454006_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_454006_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_454006_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033512
description: L-lysine catabolic process to acetyl-CoA via saccharopine
memo: https://amigo.geneontology.org/amigo/term/GO:0033512
golevel: 13
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0033512_L-lysine_catabolic_process_to_acetyl-CoA_via_saccharopine


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033764
description: Steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033764
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0033764_Steroid_dehydrogenase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034257
description: Nicotinamide riboside transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034257
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0034257_Nicotinamide_riboside_transmembrane_transporter_activity


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045156
memo: https://amigo.geneontology.org/amigo/term/GO:0045156
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0045156_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_454006_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_454006_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050486
description: Intramolecular transferase activity, transferring hydroxy groups
memo: https://amigo.geneontology.org/amigo/term/GO:0050486
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0050486_Intramolecular_transferase_activity,_transferring_hydroxy_groups


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_454006_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_454006_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


