# pathwayInfo

id: MAP-9636383
description: Prevention of phagosomal-lysosomal fusion
memo: https://reactome.org/content/detail/MAP-9636383
name:
  Reactome Pathways.STRING_v12.0_553467_STRINGid_MAP-9636383_Prevention_of_phagosomal-lysosomal_fusion


id: MAP-983169
description: Class I MHC mediated antigen processing & presentation
memo: https://reactome.org/content/detail/MAP-983169
name:
  Reactome Pathways.STRING_v12.0_553467_STRINGid_MAP-983169_Class_I_MHC_mediated_antigen_processing_&_presentation


id: PF00004
description: ATPase family associated with various cellular activities (AAA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00004
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00004_ATPase_family_associated_with_various_cellular_activities_(AAA)


id: PF00006
description: ATP synthase alpha/beta family, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00006
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00006_ATP_synthase_alpha/beta_family,_nucleotide-binding_domain


id: PF00056
description: Lactate/malate dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00056
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00056_Lactate/malate_dehydrogenase,_NAD_binding_domain


id: PF00070
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00070
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00070_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF00081
description: Iron/manganese superoxide dismutases, alpha-hairpin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00081
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00081_Iron/manganese_superoxide_dismutases,_alpha-hairpin_domain


id: PF00109
description: Beta-ketoacyl synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00109
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00109_Beta-ketoacyl_synthase,_N-terminal_domain


id: PF00111
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00111
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00111_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF00115
description: Cytochrome C and Quinol oxidase polypeptide I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00115
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00115_Cytochrome_C_and_Quinol_oxidase_polypeptide_I


id: PF00116
description: Cytochrome C oxidase subunit II, periplasmic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00116
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00116_Cytochrome_C_oxidase_subunit_II,_periplasmic_domain


id: PF00126
description: Bacterial regulatory helix-turn-helix protein, lysR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00126
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00126_Bacterial_regulatory_helix-turn-helix_protein,_lysR_family


id: PF00127
description: Copper binding proteins, plastocyanin/azurin family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00127
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00127_Copper_binding_proteins,_plastocyanin/azurin_family


id: PF00132
description: Bacterial transferase hexapeptide (six repeats)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00132
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00132_Bacterial_transferase_hexapeptide_(six_repeats)


id: PF00133
description: tRNA synthetases class I (I, L, M and V)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00133
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00133_tRNA_synthetases_class_I_(I,_L,_M_and_V)


id: PF00160
description: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00160
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00160_Cyclophilin_type_peptidyl-prolyl_cis-trans_isomerase/CLD


id: PF00174
description: Oxidoreductase molybdopterin binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00174
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00174_Oxidoreductase_molybdopterin_binding_domain


id: PF00185
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00185
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00185_Aspartate/ornithine_carbamoyltransferase,_Asp/Orn_binding_domain


id: PF00198
description: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00198
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00198_2-oxoacid_dehydrogenases_acyltransferase_(catalytic_domain)


id: PF00205
description: Thiamine pyrophosphate enzyme, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00205
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00205_Thiamine_pyrophosphate_enzyme,_central_domain


id: PF00209
description: Sodium:neurotransmitter symporter family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00209
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00209_Sodium:neurotransmitter_symporter_family


id: PF00254
description: FKBP-type peptidyl-prolyl cis-trans isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00254
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00254_FKBP-type_peptidyl-prolyl_cis-trans_isomerase


id: PF00275
description: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00275
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00275_EPSP_synthase_(3-phosphoshikimate_1-carboxyvinyltransferase)


id: PF00282
description: Pyridoxal-dependent decarboxylase conserved domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00282
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00282_Pyridoxal-dependent_decarboxylase_conserved_domain


id: PF00300
description: Histidine phosphatase superfamily (branch 1)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00300
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00300_Histidine_phosphatase_superfamily_(branch_1)


id: PF00316
description: Fructose-1-6-bisphosphatase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00316
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00316_Fructose-1-6-bisphosphatase,_N-terminal_domain


id: PF00317
description: Ribonucleotide reductase, all-alpha domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00317
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00317_Ribonucleotide_reductase,_all-alpha_domain


id: PF00329
description: Respiratory-chain NADH dehydrogenase, 30 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00329
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00329_Respiratory-chain_NADH_dehydrogenase,_30_Kd_subunit


id: PF00346
description: Respiratory-chain NADH dehydrogenase, 49 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00346
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00346_Respiratory-chain_NADH_dehydrogenase,_49_Kd_subunit


id: PF00352
description: Transcription factor TFIID (or TATA-binding protein, TBP)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00352
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00352_Transcription_factor_TFIID_(or_TATA-binding_protein,_TBP)


id: PF00359
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00359
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00359_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system,_EIIA_2


id: PF00368
description: Hydroxymethylglutaryl-coenzyme A reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00368
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00368_Hydroxymethylglutaryl-coenzyme_A_reductase


id: PF00370
description: FGGY family of carbohydrate kinases, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00370
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00370_FGGY_family_of_carbohydrate_kinases,_N-terminal_domain


id: PF00392
description: Bacterial regulatory proteins, gntR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00392
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00392_Bacterial_regulatory_proteins,_gntR_family


id: PF00408
description: Phosphoglucomutase/phosphomannomutase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00408
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00408_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain


id: PF00420
description: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00420
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00420_NADH-ubiquinone/plastoquinone_oxidoreductase_chain_4L


id: PF00440
description: Bacterial regulatory proteins, tetR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00440
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00440_Bacterial_regulatory_proteins,_tetR_family


id: PF00456
description: Transketolase, thiamine diphosphate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00456
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00456_Transketolase,_thiamine_diphosphate_binding_domain


id: PF00482
description: Type II secretion system (T2SS), protein F
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00482
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00482_Type_II_secretion_system_(T2SS),_protein_F


id: PF00485
description: Phosphoribulokinase / Uridine kinase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00485
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00485_Phosphoribulokinase_/_Uridine_kinase_family


id: PF00496
description: Bacterial extracellular solute-binding proteins, family 5 Middle
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00496
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00496_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: PF00499
description: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00499
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00499_NADH-ubiquinone/plastoquinone_oxidoreductase_chain_6


id: PF00507
description: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00507
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00507_NADH-ubiquinone/plastoquinone_oxidoreductase,_chain_3


id: PF00528
description: Binding-protein-dependent transport system inner membrane component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00528
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00528_Binding-protein-dependent_transport_system_inner_membrane_component


id: PF00532
description: Periplasmic binding proteins and sugar binding domain of LacI family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00532
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00532_Periplasmic_binding_proteins_and_sugar_binding_domain_of_LacI_family


id: PF00586
description: AIR synthase related protein, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00586
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00586_AIR_synthase_related_protein,_N-terminal_domain


id: PF00587
description: tRNA synthetase class II core domain (G, H, P, S and T)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00587
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00587_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T)


id: PF00590
description: Tetrapyrrole (Corrin/Porphyrin) Methylases
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00590
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00590_Tetrapyrrole_(Corrin/Porphyrin)_Methylases


id: PF00662
description: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00662
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00662_NADH-Ubiquinone_oxidoreductase_(complex_I),_chain_5_N-terminus


id: PF00697
description: N-(5phosphoribosyl)anthranilate (PRA) isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00697
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00697_N-(5phosphoribosyl)anthranilate_(PRA)_isomerase


id: PF00705
description: Proliferating cell nuclear antigen, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00705
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00705_Proliferating_cell_nuclear_antigen,_N-terminal_domain


id: PF00724
description: NADH:flavin oxidoreductase / NADH oxidase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00724
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00724_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: PF00725
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00725
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00725_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal_domain


id: PF00745
description: Glutamyl-tRNAGlu reductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00745
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00745_Glutamyl-tRNAGlu_reductase,_dimerisation_domain


id: PF00749
description: tRNA synthetases class I (E and Q), catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00749
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00749_tRNA_synthetases_class_I_(E_and_Q),_catalytic_domain


id: PF00763
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00763
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00763_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_catalytic_domain


id: PF00766
description: Electron transfer flavoprotein FAD-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00766
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00766_Electron_transfer_flavoprotein_FAD-binding_domain


id: PF00808
description: Histone-like transcription factor (CBF/NF-Y) and archaeal histone
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00808
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00808_Histone-like_transcription_factor_(CBF/NF-Y)_and_archaeal_histone


id: PF00828
description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00828
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00828_Ribosomal_proteins_50S-L15,_50S-L18e,_60S-L27A


id: PF00902
description: Sec-independent protein translocase protein (TatC)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00902
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00902_Sec-independent_protein_translocase_protein_(TatC)


id: PF00903
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00903
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00903_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF00926
description: 3,4-dihydroxy-2-butanone 4-phosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00926
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00926_3,4-dihydroxy-2-butanone_4-phosphate_synthase


id: PF00933
description: Glycosyl hydrolase family 3 N terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00933
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00933_Glycosyl_hydrolase_family_3_N_terminal_domain


id: PF00939
description: Sodium:sulfate symporter transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00939
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00939_Sodium:sulfate_symporter_transmembrane_region


id: PF00984
description: UDP-glucose/GDP-mannose dehydrogenase family, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00984
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF00984_UDP-glucose/GDP-mannose_dehydrogenase_family,_central_domain


id: PF01022
description: Bacterial regulatory protein, arsR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01022
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01022_Bacterial_regulatory_protein,_arsR_family


id: PF01035
description: 6-O-methylguanine DNA methyltransferase, DNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01035
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01035_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: PF01058
description: NADH ubiquinone oxidoreductase, 20 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01058
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01058_NADH_ubiquinone_oxidoreductase,_20_Kd_subunit


id: PF01071
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01071
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01071_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: PF01077
description: Nitrite and sulphite reductase 4Fe-4S domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01077
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01077_Nitrite_and_sulphite_reductase_4Fe-4S_domain


id: PF01127
description: Succinate dehydrogenase/Fumarate reductase transmembrane subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01127
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01127_Succinate_dehydrogenase/Fumarate_reductase_transmembrane_subunit


id: PF01128
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01128
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01128_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase


id: PF01135
description: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01135
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01135_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)


id: PF01154
description: Hydroxymethylglutaryl-coenzyme A synthase N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01154
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01154_Hydroxymethylglutaryl-coenzyme_A_synthase_N_terminal


id: PF01156
description: Inosine-uridine preferring nucleoside hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01156
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01156_Inosine-uridine_preferring_nucleoside_hydrolase


id: PF01161
description: Phosphatidylethanolamine-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01161
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01161_Phosphatidylethanolamine-binding_protein


id: PF01172
description: Shwachman-Bodian-Diamond syndrome (SBDS) protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01172
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01172_Shwachman-Bodian-Diamond_syndrome_(SBDS)_protein_


id: PF01193
description: RNA polymerase Rpb3/Rpb11 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01193
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01193_RNA_polymerase_Rpb3/Rpb11_dimerisation_domain


id: PF01248
description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01248
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01248_Ribosomal_protein_L7Ae/L30e/S12e/Gadd45_family


id: PF01255
description: Putative undecaprenyl diphosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01255
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01255_Putative_undecaprenyl_diphosphate_synthase


id: PF01297
description: Zinc-uptake complex component A periplasmic
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01297
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01297_Zinc-uptake_complex_component_A_periplasmic


id: PF01314
description: Aldehyde ferredoxin oxidoreductase, domains 2 & 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01314
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01314_Aldehyde_ferredoxin_oxidoreductase,_domains_2_&_3


id: PF01326
description: Pyruvate phosphate dikinase, AMP/ATP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01326
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01326_Pyruvate_phosphate_dikinase,_AMP/ATP-binding_domain


id: PF01329
description: Pterin 4 alpha carbinolamine dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01329
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01329_Pterin_4_alpha_carbinolamine_dehydratase


id: PF01370
description: NAD dependent epimerase/dehydratase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01370
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01370_NAD_dependent_epimerase/dehydratase_family


id: PF01379
description: Porphobilinogen deaminase, dipyromethane cofactor binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01379
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01379_Porphobilinogen_deaminase,_dipyromethane_cofactor_binding_domain


id: PF01396
description: Topoisomerase DNA binding C4 zinc finger
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01396
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01396_Topoisomerase_DNA_binding_C4_zinc_finger


id: PF01406
description: tRNA synthetases class I (C) catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01406
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01406_tRNA_synthetases_class_I_(C)_catalytic_domain


id: PF01408
description: Oxidoreductase family, NAD-binding Rossmann fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01408
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01408_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: PF01409
description: tRNA synthetases class II core domain (F)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01409
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01409_tRNA_synthetases_class_II_core_domain_(F)


id: PF01450
description: Acetohydroxy acid isomeroreductase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01450
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01450_Acetohydroxy_acid_isomeroreductase,_catalytic_domain


id: PF01507
description: Phosphoadenosine phosphosulfate reductase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01507
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01507_Phosphoadenosine_phosphosulfate_reductase_family


id: PF01509
description: TruB family pseudouridylate synthase (N terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01509
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01509_TruB_family_pseudouridylate_synthase_(N_terminal_domain)


id: PF01512
description: Respiratory-chain NADH dehydrogenase 51 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01512
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01512_Respiratory-chain_NADH_dehydrogenase_51_Kd_subunit


id: PF01547
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01547
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01547_Bacterial_extracellular_solute-binding_protein


id: PF01557
description: Fumarylacetoacetate (FAA) hydrolase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01557
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01557_Fumarylacetoacetate_(FAA)_hydrolase_family


id: PF01558
description: Pyruvate ferredoxin/flavodoxin oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01558
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01558_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: PF01566
description: Natural resistance-associated macrophage protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01566
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01566_Natural_resistance-associated_macrophage_protein


id: PF01568
description: Molydopterin dinucleotide binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01568
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01568_Molydopterin_dinucleotide_binding_domain


id: PF01571
description: Aminomethyltransferase folate-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01571
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01571_Aminomethyltransferase_folate-binding_domain


id: PF01654
description: Cytochrome bd terminal oxidase subunit I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01654
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01654_Cytochrome_bd_terminal_oxidase_subunit_I


id: PF01656
description: CobQ/CobB/MinD/ParA nucleotide binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01656
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01656_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: PF01663
description: Type I phosphodiesterase / nucleotide pyrophosphatase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01663
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01663_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: PF01729
description: Quinolinate phosphoribosyl transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01729
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01729_Quinolinate_phosphoribosyl_transferase,_C-terminal_domain


id: PF01775
description: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01775
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01775_Ribosomal_proteins_50S-L18Ae/60S-L20/60S-L18A


id: PF01796
description: DUF35 OB-fold domain, acyl-CoA-associated
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01796
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01796_DUF35_OB-fold_domain,_acyl-CoA-associated


id: PF01812
description: 5-formyltetrahydrofolate cyclo-ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01812
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01812_5-formyltetrahydrofolate_cyclo-ligase_family


id: PF01855
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01855
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01855_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_thiamine_diP-bdg


id: PF01862
description: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01862
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01862_Pyruvoyl-dependent_arginine_decarboxylase_(PvlArgDC)


id: PF01870
description: Archaeal holliday junction resolvase (hjc)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01870
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01870_Archaeal_holliday_junction_resolvase_(hjc)


id: PF01874
description: ATP:dephospho-CoA triphosphoribosyl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01874
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01874_ATP:dephospho-CoA_triphosphoribosyl_transferase_


id: PF01889
description: Membrane protein of unknown function DUF63
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01889
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01889_Membrane_protein_of_unknown_function_DUF63


id: PF01915
description: Glycosyl hydrolase family 3 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01915
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01915_Glycosyl_hydrolase_family_3_C-terminal_domain


id: PF01941
description: S-adenosylmethionine synthetase (AdoMet synthetase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01941
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01941_S-adenosylmethionine_synthetase_(AdoMet_synthetase)


id: PF01948
description: Aspartate carbamoyltransferase regulatory chain, allosteric domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01948
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01948_Aspartate_carbamoyltransferase_regulatory_chain,_allosteric_domain


id: PF01951
description: Archease protein family (MTH1598/TM1083)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01951
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01951_Archease_protein_family_(MTH1598/TM1083)


id: PF01970
description: Tripartite tricarboxylate transporter TctA family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01970
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01970_Tripartite_tricarboxylate_transporter_TctA_family


id: PF01974
description: tRNA intron endonuclease, catalytic C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01974
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01974_tRNA_intron_endonuclease,_catalytic_C-terminal_domain


id: PF01978
description: Sugar-specific transcriptional regulator TrmB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01978
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01978_Sugar-specific_transcriptional_regulator_TrmB


id: PF01994
description: tRNA ribose 2-O-methyltransferase, aTrm56
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01994
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF01994_tRNA_ribose_2-O-methyltransferase,_aTrm56


id: PF02005
description: N2,N2-dimethylguanosine tRNA methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02005
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02005_N2,N2-dimethylguanosine_tRNA_methyltransferase


id: PF02006
description: Phosphopantothenate/pantothenate synthetase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02006
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02006_Phosphopantothenate/pantothenate_synthetase


id: PF02028
description: BCCT, betaine/carnitine/choline family transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02028
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02028_BCCT,_betaine/carnitine/choline_family_transporter


id: PF02074
description: Carboxypeptidase Taq (M32) metallopeptidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02074
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02074_Carboxypeptidase_Taq_(M32)_metallopeptidase


id: PF02302
description: PTS system, Lactose/Cellobiose specific IIB subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02302
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02302_PTS_system,_Lactose/Cellobiose_specific_IIB_subunit


id: PF02322
description: Cytochrome bd terminal oxidase subunit II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02322
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02322_Cytochrome_bd_terminal_oxidase_subunit_II


id: PF02423
description: Ornithine cyclodeaminase/mu-crystallin family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02423
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02423_Ornithine_cyclodeaminase/mu-crystallin_family


id: PF02452
description: PemK-like, MazF-like toxin of type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02452
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02452_PemK-like,_MazF-like_toxin_of_type_II_toxin-antitoxin_system


id: PF02492
description: CobW/HypB/UreG, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02492
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02492_CobW/HypB/UreG,_nucleotide-binding_domain


id: PF02537
description: CrcB-like protein, Camphor Resistance (CrcB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02537
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02537_CrcB-like_protein,_Camphor_Resistance_(CrcB)


id: PF02550
description: Acetyl-CoA hydrolase/transferase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02550
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02550_Acetyl-CoA_hydrolase/transferase_N-terminal_domain


id: PF02572
description: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02572
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02572_ATP:corrinoid_adenosyltransferase_BtuR/CobO/CobP


id: PF02586
description: SOS response associated peptidase (SRAP)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02586
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02586_SOS_response_associated_peptidase_(SRAP)


id: PF02608
description: ABC transporter substrate-binding protein PnrA-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02608
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02608_ABC_transporter_substrate-binding_protein_PnrA-like


id: PF02616
description: Segregation and condensation protein ScpA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02616
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02616_Segregation_and_condensation_protein_ScpA


id: PF02624
description: YcaO cyclodehydratase, ATP-ad Mg2+-binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02624
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02624_YcaO_cyclodehydratase,_ATP-ad_Mg2+-binding


id: PF02627
description: Carboxymuconolactone decarboxylase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02627
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02627_Carboxymuconolactone_decarboxylase_family


id: PF02653
description: Branched-chain amino acid transport system / permease component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02653
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02653_Branched-chain_amino_acid_transport_system_/_permease_component


id: PF02700
description: Phosphoribosylformylglycinamidine (FGAM) synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02700
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02700_Phosphoribosylformylglycinamidine_(FGAM)_synthase


id: PF02709
description: N-terminal domain of galactosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02709
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02709_N-terminal_domain_of_galactosyltransferase


id: PF02729
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02729
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02729_Aspartate/ornithine_carbamoyltransferase,_carbamoyl-P_binding_domain


id: PF02737
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02737
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02737_3-hydroxyacyl-CoA_dehydrogenase,_NAD_binding_domain


id: PF02746
description: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02746
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02746_Mandelate_racemase_/_muconate_lactonizing_enzyme,_N-terminal_domain


id: PF02747
description: Proliferating cell nuclear antigen, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02747
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02747_Proliferating_cell_nuclear_antigen,_C-terminal_domain


id: PF02748
description: Aspartate carbamoyltransferase regulatory chain, metal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02748
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02748_Aspartate_carbamoyltransferase_regulatory_chain,_metal_binding_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02771
description: Acyl-CoA dehydrogenase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02771
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02771_Acyl-CoA_dehydrogenase,_N-terminal_domain


id: PF02774
description: Semialdehyde dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02774
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02774_Semialdehyde_dehydrogenase,_dimerisation_domain


id: PF02775
description: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02775
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02775_Thiamine_pyrophosphate_enzyme,_C-terminal_TPP_binding_domain


id: PF02776
description: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02776
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02776_Thiamine_pyrophosphate_enzyme,_N-terminal_TPP_binding_domain


id: PF02777
description: Iron/manganese superoxide dismutases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02777
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02777_Iron/manganese_superoxide_dismutases,_C-terminal_domain


id: PF02778
description: tRNA intron endonuclease, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02778
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02778_tRNA_intron_endonuclease,_N-terminal_domain


id: PF02782
description: FGGY family of carbohydrate kinases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02782
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02782_FGGY_family_of_carbohydrate_kinases,_C-terminal_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02790
description: Cytochrome C oxidase subunit II, transmembrane domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02790
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02790_Cytochrome_C_oxidase_subunit_II,_transmembrane_domain


id: PF02800
description: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02800
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02800_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain


id: PF02812
description: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02812
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02812_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: PF02826
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02826
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02826_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02885
description: Glycosyl transferase family, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02885
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02885_Glycosyl_transferase_family,_helical_bundle_domain


id: PF02894
description: Oxidoreductase family, C-terminal alpha/beta domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02894
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02894_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: PF02896
description: PEP-utilising enzyme, PEP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02896
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02896_PEP-utilising_enzyme,_PEP-binding_domain


id: PF02899
description: Phage integrase, N-terminal SAM-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02899
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02899_Phage_integrase,_N-terminal_SAM-like_domain


id: PF02955
description: Prokaryotic glutathione synthetase, ATP-grasp domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02955
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF02955_Prokaryotic_glutathione_synthetase,_ATP-grasp_domain


id: PF03009
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03009
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03009_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF03099
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03099
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03099_Biotin/lipoate_A/B_protein_ligase_family


id: PF03364
description: Polyketide cyclase / dehydrase and lipid transport
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03364
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03364_Polyketide_cyclase_/_dehydrase_and_lipid_transport


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03401
description: Tripartite tricarboxylate transporter family receptor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03401
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03401_Tripartite_tricarboxylate_transporter_family_receptor


id: PF03435
description: Saccharopine dehydrogenase NADP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03435
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03435_Saccharopine_dehydrogenase_NADP_binding_domain


id: PF03444
description: Winged helix-turn-helix transcription repressor, HrcA DNA-binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03444
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03444_Winged_helix-turn-helix_transcription_repressor,_HrcA_DNA-binding


id: PF03447
description: Homoserine dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03447
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03447_Homoserine_dehydrogenase,_NAD_binding_domain


id: PF03453
description: MoeA N-terminal region (domain I and II)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03453
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03453_MoeA_N-terminal_region_(domain_I_and_II)


id: PF03460
description: Nitrite/Sulfite reductase ferredoxin-like half domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03460
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03460_Nitrite/Sulfite_reductase_ferredoxin-like_half_domain


id: PF03551
description: Transcriptional regulator PadR-like family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03551
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03551_Transcriptional_regulator_PadR-like_family


id: PF03683
description: Uncharacterised protein family (UPF0175)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03683
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03683_Uncharacterised_protein_family_(UPF0175)


id: PF03684
description: Uncharacterised protein family (UPF0179)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03684
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03684_Uncharacterised_protein_family_(UPF0179)


id: PF03686
description: Uncharacterised protein family (UPF0146)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03686
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03686_Uncharacterised_protein_family_(UPF0146)


id: PF03706
description: Lysylphosphatidylglycerol synthase TM region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03706
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03706_Lysylphosphatidylglycerol_synthase_TM_region


id: PF03721
description: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03721
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03721_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain


id: PF03807
description: NADP oxidoreductase coenzyme F420-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03807
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03807_NADP_oxidoreductase_coenzyme_F420-dependent


id: PF03876
description: SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03876
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03876_SHS2_domain_found_in_N_terminus_of_Rpb7p/Rpc25p/MJ0397


id: PF03900
description: Porphobilinogen deaminase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03900
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03900_Porphobilinogen_deaminase,_C-terminal_domain


id: PF03950
description: tRNA synthetases class I (E and Q), anti-codon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03950
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03950_tRNA_synthetases_class_I_(E_and_Q),_anti-codon_binding_domain


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04013
description: Putative SAM-dependent RNA methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04013
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04013_Putative_SAM-dependent_RNA_methyltransferase


id: PF04039
description: Domain related to MnhB subunit of Na+/H+ antiporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04039
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04039_Domain_related_to_MnhB_subunit_of_Na+/H+_antiporter


id: PF04066
description: Multiple resistance and pH regulation protein F (MrpF / PhaF)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04066
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04066_Multiple_resistance_and_pH_regulation_protein_F_(MrpF_/_PhaF)


id: PF04068
description: Possible Fer4-like domain in RNase L inhibitor, RLI
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04068
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04068_Possible_Fer4-like_domain_in_RNase_L_inhibitor,_RLI


id: PF04104
description: Eukaryotic and archaeal DNA primase, large subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04104
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04104_Eukaryotic_and_archaeal_DNA_primase,_large_subunit


id: PF04107
description: Glutamate-cysteine ligase family 2(GCS2)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04107
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04107_Glutamate-cysteine_ligase_family_2(GCS2)


id: PF04127
description: DNA / pantothenate metabolism flavoprotein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04127
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04127_DNA_/_pantothenate_metabolism_flavoprotein


id: PF04135
description: Nucleolar RNA-binding protein, Nop10p family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04135
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04135_Nucleolar_RNA-binding_protein,_Nop10p_family


id: PF04140
description: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04140
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04140_Isoprenylcysteine_carboxyl_methyltransferase_(ICMT)_family_


id: PF04166
description: Pyridoxal phosphate biosynthetic protein PdxA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04166
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04166_Pyridoxal_phosphate_biosynthetic_protein_PdxA


id: PF04283
description: Chemotaxis signal transduction system protein F from archaea
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04283
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04283_Chemotaxis_signal_transduction_system_protein_F_from_archaea


id: PF04295
description: D-galactarate dehydratase / Altronate hydrolase, C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04295
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04295_D-galactarate_dehydratase_/_Altronate_hydrolase,_C_terminus


id: PF04307
description: LexA-binding, inner membrane-associated putative hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04307
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04307_LexA-binding,_inner_membrane-associated_putative_hydrolase


id: PF04422
description: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04422
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04422_Coenzyme_F420_hydrogenase/dehydrogenase,_beta_subunit_N-term


id: PF04432
description: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04432
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04432_Coenzyme_F420_hydrogenase/dehydrogenase,_beta_subunit_C_terminus


id: PF04455
description: LOR/SDH bifunctional enzyme conserved region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04455
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04455_LOR/SDH_bifunctional_enzyme_conserved_region_


id: PF04464
description: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04464
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04464_CDP-Glycerol:Poly(glycerophosphate)_glycerophosphotransferase_


id: PF04679
description: ATP dependent DNA ligase C terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04679
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04679_ATP_dependent_DNA_ligase_C_terminal_region________


id: PF04715
description: Anthranilate synthase component I, N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04715
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04715_Anthranilate_synthase_component_I,_N_terminal_region


id: PF04952
description: Succinylglutamate desuccinylase / Aspartoacylase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04952
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF04952_Succinylglutamate_desuccinylase_/_Aspartoacylase_family


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05189
description: RNA 3-terminal phosphate cyclase (RTC), insert domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05189
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF05189_RNA_3-terminal_phosphate_cyclase_(RTC),_insert_domain


id: PF05201
description: Glutamyl-tRNAGlu reductase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05201
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF05201_Glutamyl-tRNAGlu_reductase,_N-terminal_domain


id: PF05378
description: Hydantoinase/oxoprolinase N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05378
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF05378_Hydantoinase/oxoprolinase_N-terminal_region


id: PF05437
description: Branched-chain amino acid transport protein (AzlD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05437
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF05437_Branched-chain_amino_acid_transport_protein_(AzlD)


id: PF05787
description: Bacterial protein of unknown function (DUF839)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05787
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF05787_Bacterial_protein_of_unknown_function_(DUF839)


id: PF05985
description: Ethanolamine ammonia-lyase light chain (EutC)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05985
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF05985_Ethanolamine_ammonia-lyase_light_chain_(EutC)


id: PF06026
description: Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06026
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06026_Ribose_5-phosphate_isomerase_A_(phosphoriboisomerase_A)


id: PF06094
description: Gamma-glutamyl cyclotransferase, AIG2-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06094
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06094_Gamma-glutamyl_cyclotransferase,_AIG2-like


id: PF06133
description: Control of competence regulator ComK, YlbF/YmcA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06133
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06133_Control_of_competence_regulator_ComK,_YlbF/YmcA


id: PF06240
description: Carbon monoxide dehydrogenase subunit G (CoxG)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06240
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06240_Carbon_monoxide_dehydrogenase_subunit_G_(CoxG)


id: PF06325
description: Ribosomal protein L11 methyltransferase (PrmA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06325
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06325_Ribosomal_protein_L11_methyltransferase_(PrmA)


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06677
description: Sjogrens syndrome/scleroderma autoantigen 1 (Autoantigen p27)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06677
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06677_Sjogrens_syndrome/scleroderma_autoantigen_1_(Autoantigen_p27)


id: PF06751
description: Ethanolamine ammonia lyase large subunit (EutB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06751
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06751_Ethanolamine_ammonia_lyase_large_subunit_(EutB)


id: PF06779
description: Uncharacterised MFS-type transporter YbfB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06779
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06779_Uncharacterised_MFS-type_transporter_YbfB


id: PF06792
description: Uncharacterised protein family (UPF0261)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06792
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06792_Uncharacterised_protein_family_(UPF0261)


id: PF06798
description: PrkA serine protein kinase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06798
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06798_PrkA_serine_protein_kinase_C-terminal_domain


id: PF06808
description: Tripartite ATP-independent periplasmic transporter, DctM component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06808
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06808_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component


id: PF06847
description: Archaeal Peptidase A24 C-terminus Type II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06847
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF06847_Archaeal_Peptidase_A24_C-terminus_Type_II


id: PF07221
description: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07221
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07221_N-acylglucosamine_2-epimerase_(GlcNAc_2-epimerase)


id: PF07331
description: Tripartite tricarboxylate transporter TctB family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07331
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07331_Tripartite_tricarboxylate_transporter_TctB_family


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07541
description: Eukaryotic translation initiation factor 2 alpha subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07541
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07541_Eukaryotic_translation_initiation_factor_2_alpha_subunit


id: PF07669
description: Eco57I restriction-modification methylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07669
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07669_Eco57I_restriction-modification_methylase


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07755
description: Domain of unknown function (DUF1611_C) P-loop domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07755
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07755_Domain_of_unknown_function_(DUF1611_C)_P-loop_domain


id: PF07934
description: 8-oxoguanine DNA glycosylase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07934
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07934_8-oxoguanine_DNA_glycosylase,_N-terminal_domain


id: PF07991
description: Acetohydroxy acid isomeroreductase, NADPH-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07991
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07991_Acetohydroxy_acid_isomeroreductase,_NADPH-binding_domain


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08211
description: Cytidine and deoxycytidylate deaminase zinc-binding region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08211
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08211_Cytidine_and_deoxycytidylate_deaminase_zinc-binding_region_


id: PF08267
description: Cobalamin-independent synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08267
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08267_Cobalamin-independent_synthase,_N-terminal_domain


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08540
description: Hydroxymethylglutaryl-coenzyme A synthase C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08540
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08540_Hydroxymethylglutaryl-coenzyme_A_synthase_C_terminal


id: PF08546
description: Ketopantoate reductase PanE/ApbA C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08546
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08546_Ketopantoate_reductase_PanE/ApbA_C_terminal


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF09173
description: Initiation factor eIF2 gamma, C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09173
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09173_Initiation_factor_eIF2_gamma,_C_terminal


id: PF09243
description: Mitochondrial small ribosomal subunit Rsm22
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09243
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09243_Mitochondrial_small_ribosomal_subunit_Rsm22


id: PF09249
description: tRNA nucleotidyltransferase, second domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09249
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09249_tRNA_nucleotidyltransferase,_second_domain


id: PF09622
description: Putative integral membrane protein (DUF2391)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09622
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09622_Putative_integral_membrane_protein_(DUF2391)


id: PF09721
description: Transmembrane exosortase (Exosortase_EpsH)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09721
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09721_Transmembrane_exosortase_(Exosortase_EpsH)


id: PF09844
description: Uncharacterized conserved protein (COG2071)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09844
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09844_Uncharacterized_conserved_protein_(COG2071)


id: PF09846
description: Uncharacterized protein conserved in archaea (DUF2073)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09846
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09846_Uncharacterized_protein_conserved_in_archaea_(DUF2073)


id: PF09855
description: Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09855
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09855_Nucleic-acid-binding_protein_containing_Zn-ribbon_domain_(DUF2082)


id: PF09876
description: Predicted metal-binding protein (DUF2103)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09876
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09876_Predicted_metal-binding_protein_(DUF2103)


id: PF09883
description: Uncharacterized protein conserved in archaea (DUF2110)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09883
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09883_Uncharacterized_protein_conserved_in_archaea_(DUF2110)


id: PF09920
description: Uncharacterized protein conserved in archaea (DUF2150)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09920
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09920_Uncharacterized_protein_conserved_in_archaea_(DUF2150)


id: PF09999
description: Uncharacterized protein conserved in archaea (DUF2240)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09999
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF09999_Uncharacterized_protein_conserved_in_archaea_(DUF2240)


id: PF10006
description: Uncharacterized conserved protein (DUF2249)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10006
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF10006_Uncharacterized_conserved_protein_(DUF2249)


id: PF10028
description: Predicted integral membrane protein (DUF2270)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10028
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF10028_Predicted_integral_membrane_protein_(DUF2270)


id: PF10060
description: Uncharacterized membrane protein (DUF2298)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10060
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF10060_Uncharacterized_membrane_protein_(DUF2298)


id: PF10069
description: Sensory domain in DIguanylate Cyclases and Two-component system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10069
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF10069_Sensory_domain_in_DIguanylate_Cyclases_and_Two-component_system


id: PF10096
description: Uncharacterized protein conserved in bacteria (DUF2334)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10096
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF10096_Uncharacterized_protein_conserved_in_bacteria_(DUF2334)


id: PF10518
description: TAT (twin-arginine translocation) pathway signal sequence
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10518
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF10518_TAT_(twin-arginine_translocation)_pathway_signal_sequence


id: PF10604
description: Polyketide cyclase / dehydrase and lipid transport
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10604
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF10604_Polyketide_cyclase_/_dehydrase_and_lipid_transport


id: PF12367
description: Pyruvate ferredoxin oxidoreductase beta subunit C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12367
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF12367_Pyruvate_ferredoxin_oxidoreductase_beta_subunit_C_terminal


id: PF12535
description: Hydrolase of X-linked nucleoside diphosphate N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12535
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF12535_Hydrolase_of_X-linked_nucleoside_diphosphate_N_terminal_


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13336
description: Acetyl-CoA hydrolase/transferase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13336
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13336_Acetyl-CoA_hydrolase/transferase_C-terminal_domain


id: PF13367
description: PrsW family intramembrane metalloprotease
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13367
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13367_PrsW_family_intramembrane_metalloprotease


id: PF13370
description: 4Fe-4S single cluster domain of Ferredoxin I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13370
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13370_4Fe-4S_single_cluster_domain_of_Ferredoxin_I


id: PF13416
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13416
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13416_Bacterial_extracellular_solute-binding_protein


id: PF13417
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13417
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13417_Glutathione_S-transferase,_N-terminal_domain


id: PF13510
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13510
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13510_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13607
description: Succinyl-CoA ligase like flavodoxin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13607
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13607_Succinyl-CoA_ligase_like_flavodoxin_domain


id: PF13636
description: RNA-binding PUA-like domain of methyltransferase RsmF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13636
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13636_RNA-binding_PUA-like_domain_of_methyltransferase_RsmF


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13722
description: 5TM C-terminal transporter carbon starvation CstA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13722
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13722_5TM_C-terminal_transporter_carbon_starvation_CstA


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13977
description: BetI-type transcriptional repressor, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13977
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF13977_BetI-type_transcriptional_repressor,_C-terminal


id: PF14417
description: MEDS: MEthanogen/methylotroph, DcmR Sensory domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14417
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF14417_MEDS:_MEthanogen/methylotroph,_DcmR_Sensory_domain


id: PF14497
description: Glutathione S-transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14497
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF14497_Glutathione_S-transferase,_C-terminal_domain


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14805
description: Tetrahydrodipicolinate N-succinyltransferase N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14805
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF14805_Tetrahydrodipicolinate_N-succinyltransferase_N-terminal


id: PF14810
description: Patch-forming domain C2 of tRNA-guanine transglycosylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14810
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF14810_Patch-forming_domain_C2_of_tRNA-guanine_transglycosylase


id: PF15780
description: Abnormal spindle-like microcephaly-assocd, ASPM-SPD-2-Hydin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15780
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF15780_Abnormal_spindle-like_microcephaly-assocd,_ASPM-SPD-2-Hydin


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16881
description: N-terminal domain of lipoyl synthase of Radical_SAM family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16881
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF16881_N-terminal_domain_of_lipoyl_synthase_of_Radical_SAM_family


id: PF16886
description: ATPsynthase alpha/beta subunit N-term extension
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16886
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF16886_ATPsynthase_alpha/beta_subunit_N-term_extension


id: PF16896
description: Phosphogluconate dehydrogenase (decarboxylating) C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16896
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF16896_Phosphogluconate_dehydrogenase_(decarboxylating)_C-term


id: PF16927
description: N-terminal 7TM region of histidine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16927
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF16927_N-terminal_7TM_region_of_histidine_kinase


id: PF16983
description: Molybdate transporter of MFS superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16983
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF16983_Molybdate_transporter_of_MFS_superfamily


id: PF17144
description: Ribosomal large subunit proteins 60S L5, and 50S L18
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17144
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF17144_Ribosomal_large_subunit_proteins_60S_L5,_and_50S_L18


id: PF17147
description: Pyruvate:ferredoxin oxidoreductase core domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17147
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF17147_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: PF17396
description: Domain of unknown function (DUF1611_N) Rossmann-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17396
name:
  Protein Domains (Pfam).STRING_v12.0_553467_STRINGid_PF17396_Domain_of_unknown_function_(DUF1611_N)_Rossmann-like_domain


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00226
description: Low molecular weight phosphatase family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00260
description: Two component signalling adaptor domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00260
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00260_Two_component_signalling_adaptor_domain


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00305
description: Hint (Hedgehog/Intein) domain C-terminal region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00305
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00305_Hint_(Hedgehog/Intein)_domain_C-terminal_region


id: SM00306
description: Hint (Hedgehog/Intein) domain N-terminal region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00306
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00306_Hint_(Hedgehog/Intein)_domain_N-terminal_region


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00346
description: Helix_turn_helix isocitrate lyase regulation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00346
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00346_Helix_turn_helix_isocitrate_lyase_regulation


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00385
description: Domain present in cyclins, TFIIB and Retinoblastoma
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00385
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00385_Domain_present_in_cyclins,_TFIIB_and_Retinoblastoma


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00460
description: Transglutaminase/protease-like homologues
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00460
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00460_Transglutaminase/protease-like_homologues


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00562
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00652
description: Eukaryotic translation initiation factor 1A
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00652
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00652_Eukaryotic_translation_initiation_factor_1A


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00730
description: Presenilin, signal peptide peptidase, family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00730
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00730_Presenilin,_signal_peptide_peptidase,_family


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00752
description: Horizontally Transferred TransMembrane Domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00752
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00752_Horizontally_Transferred_TransMembrane_Domain


id: SM00758
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00758
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00758_Domain_in_bacterial_beta-glucosidases_other_glycosidases,_glycosyltransferases,_proteases,_amidases,_yeast_adhesins,_and_bacterial_toxins.

description:
  Domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.


id: SM00769
description: Water Stress and Hypersensitive response
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00769
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00769_Water_Stress_and_Hypersensitive_response


id: SM00790
description: Aldehyde ferredoxin oxidoreductase, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00790
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00790_Aldehyde_ferredoxin_oxidoreductase,_N-terminal_domain


id: SM00833
description: Cobalamin synthesis protein cobW C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00833
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00833_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00858
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00870
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00870
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00870_Asparaginase,_which_is_found_in_various_plant,_animal_and_bacterial_cells,_catalyses_the_deamination_of_asparagine_to_yield_aspartic_acid_and_an_ammonium_ion,_resulting_in_a_depletion_of_free_circulatory_asparagine_in_plasma_PUBMED:3026924._The_...

description:
  Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The ...


id: SM00888
description: EF-1 guanine nucleotide exchange domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00888
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00888_EF-1_guanine_nucleotide_exchange_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00933
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00933
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00933_This_family_includes_NurA_a_nuclease_exhibiting_both_single-stranded_endonuclease_activity_and_5-3_exonuclease_activity_on_single-stranded_and_double-stranded_DNA_from_the_hyperthermophilic_archaeon_Sulfolobus_acidocaldarius_PUBMED:12052775.

description:
  This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5-3 exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius PUBMED:12052775.


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00939
description: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00939
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00939_X-Pro_dipeptidyl-peptidase_C-terminal_non-catalytic_domain


id: SM00943
description: Bifunctional DNA primase/polymerase, N-terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00943
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00943_Bifunctional_DNA_primase/polymerase,_N-terminal


id: SM00948
description: Proteasome subunit A N-terminal signature Add an annotation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00948
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00948_Proteasome_subunit_A_N-terminal_signature__Add_an_annotation


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00981
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01072
description: Cell division protein 48 (CDC48) domain 2
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01072
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01072_Cell_division_protein_48_(CDC48)_domain_2


id: SM01073
description: Cell division protein 48 (CDC48) N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01073
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01073_Cell_division_protein_48_(CDC48)_N-terminal_domain


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01103
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01103
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01103_Escherichia_coli_YhbY_is_associated_with_pre-50S_ribosomal_subunits,_which_implies_a_function_in_ribosome_assembly._GFP_fused_to_a_single-domain_CRM_protein_from_maize_localises_to_the_nucleolus,_suggesting_that_an_analogous_activity_may_have_been_...

description:
  Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been ...


id: SM01118
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01118
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01118_These_sequences_are_functionally_identified_as_members_of_the_adenylate_cyclase_family,_which_catalyses_the_conversion_of_ATP_to_3,5-cyclic_AMP_and_pyrophosphate._Six_distinct_non-homologous_classes_of_AC_have_been_identified._The_structure_of_...

description:
  These sequences are functionally identified as members of the adenylate cyclase family, which catalyses the conversion of ATP to 3,5-cyclic AMP and pyrophosphate. Six distinct non-homologous classes of AC have been identified. The structure of ...


id: SM01120
description: This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01120
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01120_This_domain_is_the_predicted_phosphatase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01194
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01194
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01194_The_release_factor_eRF1_terminates_protein_biosynthesis_by_recognising_stop_codons_at_the_A_site_of_the_ribosome_and_stimulating_peptidyl-tRNA_bond_hydrolysis_at_the_peptidyl_transferase_centre._The_crystal_structure_of_human_eRF1_is_known_...

description:
  The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01231
description: Signal transducing histidine kinase, homodimeric domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01231
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01231_Signal_transducing_histidine_kinase,_homodimeric_domain


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01350
description: 6-phosphogluconate dehydrogenase, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01350
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01350_6-phosphogluconate_dehydrogenase,_C-terminal_domain


id: SM01376
description: Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01376
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01376_Eukaryotic_elongation_factor_5A_hypusine,_DNA-binding_OB_fold


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01393
description: This family includes ribosomal protein L32 from eukaryotes and archaebacteria.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01393
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01393_This_family_includes_ribosomal_protein_L32_from_eukaryotes_and_archaebacteria.


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_553467_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


