# pathwayInfo

id: MAP-166058
description: MyD88:MAL(TIRAP) cascade initiated on plasma membrane
memo: https://reactome.org/content/detail/MAP-166058
name:
  Reactome Pathways.STRING_v12.0_575614_STRINGid_MAP-166058_MyD88:MAL(TIRAP)_cascade_initiated_on_plasma_membrane


id: MAP-5602358
description: Diseases associated with the TLR signaling cascade
memo: https://reactome.org/content/detail/MAP-5602358
name:
  Reactome Pathways.STRING_v12.0_575614_STRINGid_MAP-5602358_Diseases_associated_with_the_TLR_signaling_cascade


id: MAP-8876384
description: Listeria monocytogenes entry into host cells
memo: https://reactome.org/content/detail/MAP-8876384
name:
  Reactome Pathways.STRING_v12.0_575614_STRINGid_MAP-8876384_Listeria_monocytogenes_entry_into_host_cells


id: MAP-9635486
description: Infection with Mycobacterium tuberculosis
memo: https://reactome.org/content/detail/MAP-9635486
name:
  Reactome Pathways.STRING_v12.0_575614_STRINGid_MAP-9635486_Infection_with_Mycobacterium_tuberculosis


id: MAP-9636383
description: Prevention of phagosomal-lysosomal fusion
memo: https://reactome.org/content/detail/MAP-9636383
name:
  Reactome Pathways.STRING_v12.0_575614_STRINGid_MAP-9636383_Prevention_of_phagosomal-lysosomal_fusion


id: MAP-983169
description: Class I MHC mediated antigen processing & presentation
memo: https://reactome.org/content/detail/MAP-983169
name:
  Reactome Pathways.STRING_v12.0_575614_STRINGid_MAP-983169_Class_I_MHC_mediated_antigen_processing_&_presentation


id: PF00056
description: Lactate/malate dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00056
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00056_Lactate/malate_dehydrogenase,_NAD_binding_domain


id: PF00115
description: Cytochrome C and Quinol oxidase polypeptide I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00115
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00115_Cytochrome_C_and_Quinol_oxidase_polypeptide_I


id: PF00133
description: tRNA synthetases class I (I, L, M and V)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00133
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00133_tRNA_synthetases_class_I_(I,_L,_M_and_V)


id: PF00185
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00185
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00185_Aspartate/ornithine_carbamoyltransferase,_Asp/Orn_binding_domain


id: PF00254
description: FKBP-type peptidyl-prolyl cis-trans isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00254
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00254_FKBP-type_peptidyl-prolyl_cis-trans_isomerase


id: PF00329
description: Respiratory-chain NADH dehydrogenase, 30 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00329
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00329_Respiratory-chain_NADH_dehydrogenase,_30_Kd_subunit


id: PF00346
description: Respiratory-chain NADH dehydrogenase, 49 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00346
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00346_Respiratory-chain_NADH_dehydrogenase,_49_Kd_subunit


id: PF00420
description: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00420
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00420_NADH-ubiquinone/plastoquinone_oxidoreductase_chain_4L


id: PF00499
description: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00499
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00499_NADH-ubiquinone/plastoquinone_oxidoreductase_chain_6


id: PF00507
description: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00507
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00507_NADH-ubiquinone/plastoquinone_oxidoreductase,_chain_3


id: PF00542
description: Ribosomal protein L7/L12 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00542
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00542_Ribosomal_protein_L7/L12_C-terminal_domain


id: PF00584
description: SecE/Sec61-gamma subunits of protein translocation complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00584
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00584_SecE/Sec61-gamma_subunits_of_protein_translocation_complex


id: PF00586
description: AIR synthase related protein, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00586
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00586_AIR_synthase_related_protein,_N-terminal_domain


id: PF00587
description: tRNA synthetase class II core domain (G, H, P, S and T)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00587
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00587_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T)


id: PF00662
description: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00662
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00662_NADH-Ubiquinone_oxidoreductase_(complex_I),_chain_5_N-terminus


id: PF00707
description: Translation initiation factor IF-3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00707
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00707_Translation_initiation_factor_IF-3,_C-terminal_domain


id: PF00728
description: Glycosyl hydrolase family 20, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00728
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00728_Glycosyl_hydrolase_family_20,_catalytic_domain


id: PF00749
description: tRNA synthetases class I (E and Q), catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00749
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00749_tRNA_synthetases_class_I_(E_and_Q),_catalytic_domain


id: PF00828
description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00828
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00828_Ribosomal_proteins_50S-L15,_50S-L18e,_60S-L27A


id: PF00861
description: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00861
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00861_Ribosomal_L18_of_archaea,_bacteria,_mitoch._and_chloroplast


id: PF00905
description: Penicillin binding protein transpeptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00905
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00905_Penicillin_binding_protein_transpeptidase_domain


id: PF00930
description: Dipeptidyl peptidase IV (DPP IV) N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00930
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF00930_Dipeptidyl_peptidase_IV_(DPP_IV)_N-terminal_region


id: PF01058
description: NADH ubiquinone oxidoreductase, 20 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01058
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01058_NADH_ubiquinone_oxidoreductase,_20_Kd_subunit


id: PF01272
description: Transcription elongation factor, GreA/GreB, C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01272
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01272_Transcription_elongation_factor,_GreA/GreB,_C-term


id: PF01297
description: Zinc-uptake complex component A periplasmic
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01297
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01297_Zinc-uptake_complex_component_A_periplasmic


id: PF01370
description: NAD dependent epimerase/dehydratase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01370
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01370_NAD_dependent_epimerase/dehydratase_family


id: PF01409
description: tRNA synthetases class II core domain (F)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01409
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01409_tRNA_synthetases_class_II_core_domain_(F)


id: PF01557
description: Fumarylacetoacetate (FAA) hydrolase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01557
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01557_Fumarylacetoacetate_(FAA)_hydrolase_family


id: PF01656
description: CobQ/CobB/MinD/ParA nucleotide binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01656
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01656_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: PF01663
description: Type I phosphodiesterase / nucleotide pyrophosphatase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01663
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01663_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: PF01948
description: Aspartate carbamoyltransferase regulatory chain, allosteric domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01948
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF01948_Aspartate_carbamoyltransferase_regulatory_chain,_allosteric_domain


id: PF02113
description: D-Ala-D-Ala carboxypeptidase 3 (S13) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02113
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02113_D-Ala-D-Ala_carboxypeptidase_3_(S13)_family


id: PF02563
description: Polysaccharide biosynthesis/export protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02563
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02563_Polysaccharide_biosynthesis/export_protein


id: PF02588
description: Uncharacterised 5xTM membrane BCR, YitT family COG1284
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02588
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02588_Uncharacterised_5xTM_membrane_BCR,_YitT_family_COG1284


id: PF02617
description: ATP-dependent Clp protease adaptor protein ClpS
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02617
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02617_ATP-dependent_Clp_protease_adaptor_protein_ClpS


id: PF02683
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02683
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02683_Cytochrome_C_biogenesis_protein_transmembrane_region


id: PF02729
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02729
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02729_Aspartate/ornithine_carbamoyltransferase,_carbamoyl-P_binding_domain


id: PF02748
description: Aspartate carbamoyltransferase regulatory chain, metal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02748
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02748_Aspartate_carbamoyltransferase_regulatory_chain,_metal_binding_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02784
description: Pyridoxal-dependent decarboxylase, pyridoxal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02784
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02784_Pyridoxal-dependent_decarboxylase,_pyridoxal_binding_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02812
description: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02812
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02812_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: PF02836
description: Glycosyl hydrolases family 2, TIM barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02836
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02836_Glycosyl_hydrolases_family_2,_TIM_barrel_domain


id: PF02837
description: Glycosyl hydrolases family 2, sugar binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02837
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02837_Glycosyl_hydrolases_family_2,_sugar_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02912
description: Aminoacyl tRNA synthetase class II, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02912
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF02912_Aminoacyl_tRNA_synthetase_class_II,_N-terminal_domain


id: PF03062
description: MBOAT, membrane-bound O-acyltransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03062
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03062_MBOAT,_membrane-bound_O-acyltransferase_family


id: PF03083
description: Sugar efflux transporter for intercellular exchange
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03083
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03083_Sugar_efflux_transporter_for_intercellular_exchange


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03544
description: Gram-negative bacterial TonB protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03544
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03544_Gram-negative_bacterial_TonB_protein_C-terminal


id: PF03588
description: Leucyl/phenylalanyl-tRNA protein transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03588
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03588_Leucyl/phenylalanyl-tRNA_protein_transferase


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03819
description: MazG nucleotide pyrophosphohydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03819
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03819_MazG_nucleotide_pyrophosphohydrolase_domain


id: PF03950
description: tRNA synthetases class I (E and Q), anti-codon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03950
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF03950_tRNA_synthetases_class_I_(E_and_Q),_anti-codon_binding_domain


id: PF04263
description: Thiamin pyrophosphokinase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04263
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF04263_Thiamin_pyrophosphokinase,_catalytic_domain


id: PF04413
description: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04413
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF04413_3-Deoxy-D-manno-octulosonic-acid_transferase_(kdotransferase)


id: PF04851
description: Type III restriction enzyme, res subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04851
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF04851_Type_III_restriction_enzyme,_res_subunit


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05708
description: Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05708
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF05708_Permuted_papain-like_amidase_enzyme,_YaeF/YiiX,_C92_family


id: PF07332
description: Putative Actinobacterial Holin-X, holin superfamily III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07332
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF07332_Putative_Actinobacterial_Holin-X,_holin_superfamily_III


id: PF07669
description: Eco57I restriction-modification methylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07669
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF07669_Eco57I_restriction-modification_methylase


id: PF07698
description: 7TM receptor with intracellular HD hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07698
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF07698_7TM_receptor_with_intracellular_HD_hydrolase


id: PF07863
description: Homologues of TraJ from Bacteroides conjugative transposon
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07863
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF07863_Homologues_of_TraJ_from_Bacteroides_conjugative_transposon


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF09919
description: Uncharacterized conserved protein (DUF2149)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09919
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF09919_Uncharacterized_conserved_protein_(DUF2149)


id: PF10035
description: Uncharacterized protein conserved in bacteria (DUF2179)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10035
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF10035_Uncharacterized_protein_conserved_in_bacteria_(DUF2179)


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10412
description: Type IV secretion-system coupling protein DNA-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10412
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF10412_Type_IV_secretion-system_coupling_protein_DNA-binding_domain


id: PF11751
description: Type IX secretion system membrane protein PorP/SprF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11751
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF11751_Type_IX_secretion_system_membrane_protein_PorP/SprF


id: PF12437
description: Glutamine synthetase type III N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12437
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF12437_Glutamine_synthetase_type_III_N_terminal_


id: PF12991
description: Domain of unknown function, B. Theta Gene description (DUF3875)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12991
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF12991_Domain_of_unknown_function,_B._Theta_Gene_description_(DUF3875)


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13505
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13505
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF13505_Outer_membrane_protein_beta-barrel_domain


id: PF13568
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13568
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF13568_Outer_membrane_protein_beta-barrel_domain


id: PF13588
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13588
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF13588_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF13589
description: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13589
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF13589_Histidine_kinase-,_DNA_gyrase_B-,_and_HSP90-like_ATPase


id: PF13813
description: Membrane bound O-acyl transferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13813
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF13813_Membrane_bound_O-acyl_transferase_family


id: PF14322
description: Starch-binding associating with outer membrane
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14322
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF14322_Starch-binding_associating_with_outer_membrane


id: PF14498
description: Glycosyl hydrolase family 65, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14498
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF14498_Glycosyl_hydrolase_family_65,_N-terminal_domain


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14905
description: Outer membrane protein beta-barrel family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14905
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF14905_Outer_membrane_protein_beta-barrel_family


id: PF15283
description: Domain of unknown function (DUF4595) with porin-like fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15283
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF15283_Domain_of_unknown_function_(DUF4595)_with_porin-like_fold


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_575614_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00981
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01118
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01118
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01118_These_sequences_are_functionally_identified_as_members_of_the_adenylate_cyclase_family,_which_catalyses_the_conversion_of_ATP_to_3,5-cyclic_AMP_and_pyrophosphate._Six_distinct_non-homologous_classes_of_AC_have_been_identified._The_structure_of_...

description:
  These sequences are functionally identified as members of the adenylate cyclase family, which catalyses the conversion of ATP to 3,5-cyclic AMP and pyrophosphate. Six distinct non-homologous classes of AC have been identified. The structure of ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01473
description: HUH conjugative element mobility domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01473
name:
  Protein Domains (SMART).STRING_v12.0_575614_STRINGid_SM01473_HUH_conjugative_element_mobility_domain


