# pathwayInfo

id: PF02836
description: Glycosyl hydrolases family 2, TIM barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02836
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02836_Glycosyl_hydrolases_family_2,_TIM_barrel_domain


id: PF02837
description: Glycosyl hydrolases family 2, sugar binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02837
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02837_Glycosyl_hydrolases_family_2,_sugar_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02885
description: Glycosyl transferase family, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02885
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02885_Glycosyl_transferase_family,_helical_bundle_domain


id: PF02894
description: Oxidoreductase family, C-terminal alpha/beta domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02894
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02894_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: PF02896
description: PEP-utilising enzyme, PEP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02896
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02896_PEP-utilising_enzyme,_PEP-binding_domain


id: PF02912
description: Aminoacyl tRNA synthetase class II, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02912
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02912_Aminoacyl_tRNA_synthetase_class_II,_N-terminal_domain


id: PF02922
description: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02922
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02922_Carbohydrate-binding_module_48_(Isoamylase_N-terminal_domain)


id: PF02931
description: Neurotransmitter-gated ion-channel ligand binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02931
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02931_Neurotransmitter-gated_ion-channel_ligand_binding_domain


id: PF02932
description: Neurotransmitter-gated ion-channel transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02932
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02932_Neurotransmitter-gated_ion-channel_transmembrane_region


id: PF02954
description: Bacterial regulatory protein, Fis family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02954
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02954_Bacterial_regulatory_protein,_Fis_family


id: PF02965
description: Vitamin B12 dependent methionine synthase, activation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02965
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF02965_Vitamin_B12_dependent_methionine_synthase,_activation_domain


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03099
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03099
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03099_Biotin/lipoate_A/B_protein_ligase_family


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03264
description: NapC/NirT cytochrome c family, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03264
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03264_NapC/NirT_cytochrome_c_family,_N-terminal_region


id: PF03279
description: Bacterial lipid A biosynthesis acyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03279
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03279_Bacterial_lipid_A_biosynthesis_acyltransferase


id: PF03331
description: UDP-3-O-acyl N-acetylglycosamine deacetylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03331
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03331_UDP-3-O-acyl_N-acetylglycosamine_deacetylase


id: PF03349
description: Outer membrane protein transport protein (OMPP1/FadL/TodX)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03349
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03349_Outer_membrane_protein_transport_protein_(OMPP1/FadL/TodX)


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03435
description: Saccharopine dehydrogenase NADP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03435
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03435_Saccharopine_dehydrogenase_NADP_binding_domain


id: PF03444
description: Winged helix-turn-helix transcription repressor, HrcA DNA-binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03444
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03444_Winged_helix-turn-helix_transcription_repressor,_HrcA_DNA-binding


id: PF03446
description: NAD binding domain of 6-phosphogluconate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03446
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03446_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: PF03447
description: Homoserine dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03447
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03447_Homoserine_dehydrogenase,_NAD_binding_domain


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03453
description: MoeA N-terminal region (domain I and II)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03453
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03453_MoeA_N-terminal_region_(domain_I_and_II)


id: PF03460
description: Nitrite/Sulfite reductase ferredoxin-like half domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03460
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03460_Nitrite/Sulfite_reductase_ferredoxin-like_half_domain


id: PF03480
description: Bacterial extracellular solute-binding protein, family 7
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03480
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03480_Bacterial_extracellular_solute-binding_protein,_family_7


id: PF03534
description: Salmonella virulence plasmid 65kDa B protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03534
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03534_Salmonella_virulence_plasmid_65kDa_B_protein


id: PF03544
description: Gram-negative bacterial TonB protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03544
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03544_Gram-negative_bacterial_TonB_protein_C-terminal


id: PF03629
description: Carbohydrate esterase, sialic acid-specific acetylesterase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03629
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03629_Carbohydrate_esterase,_sialic_acid-specific_acetylesterase


id: PF03690
description: Uncharacterised protein family (UPF0160)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03690
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03690_Uncharacterised_protein_family_(UPF0160)


id: PF03706
description: Lysylphosphatidylglycerol synthase TM region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03706
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03706_Lysylphosphatidylglycerol_synthase_TM_region


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03721
description: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03721
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03721_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03740
description: Pyridoxal phosphate biosynthesis protein PdxJ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03740
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03740_Pyridoxal_phosphate_biosynthesis_protein_PdxJ


id: PF03780
description: Asp23 family, cell envelope-related function
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03780
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03780_Asp23_family,_cell_envelope-related_function


id: PF03807
description: NADP oxidoreductase coenzyme F420-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03807
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03807_NADP_oxidoreductase_coenzyme_F420-dependent


id: PF03819
description: MazG nucleotide pyrophosphohydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03819
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03819_MazG_nucleotide_pyrophosphohydrolase_domain


id: PF03865
description: Haemolysin secretion/activation protein ShlB/FhaC/HecB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03865
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03865_Haemolysin_secretion/activation_protein_ShlB/FhaC/HecB


id: PF03886
description: ABC-type transport auxiliary lipoprotein component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03886
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03886_ABC-type_transport_auxiliary_lipoprotein_component


id: PF03892
description: Nitrate reductase cytochrome c-type subunit (NapB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03892
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03892_Nitrate_reductase_cytochrome_c-type_subunit_(NapB)


id: PF03900
description: Porphobilinogen deaminase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03900
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03900_Porphobilinogen_deaminase,_C-terminal_domain


id: PF03934
description: Type II secretion system (T2SS), protein K
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03934
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03934_Type_II_secretion_system_(T2SS),_protein_K


id: PF03950
description: tRNA synthetases class I (E and Q), anti-codon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03950
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03950_tRNA_synthetases_class_I_(E_and_Q),_anti-codon_binding_domain


id: PF03958
description: Bacterial type II/III secretion system short domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03958
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03958_Bacterial_type_II/III_secretion_system_short_domain


id: PF03977
description: Na+-transporting oxaloacetate decarboxylase beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03977
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03977_Na+-transporting_oxaloacetate_decarboxylase_beta_subunit


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04020
description: Mycobacterial 4 TMS phage holin, superfamily IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04020
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04020_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: PF04039
description: Domain related to MnhB subunit of Na+/H+ antiporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04039
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04039_Domain_related_to_MnhB_subunit_of_Na+/H+_antiporter


id: PF04066
description: Multiple resistance and pH regulation protein F (MrpF / PhaF)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04066
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04066_Multiple_resistance_and_pH_regulation_protein_F_(MrpF_/_PhaF)


id: PF04079
description: Segregation and condensation complex subunit ScpB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04079
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04079_Segregation_and_condensation_complex_subunit_ScpB


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04151
description: Bacterial pre-peptidase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04151
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04151_Bacterial_pre-peptidase_C-terminal_domain


id: PF04166
description: Pyridoxal phosphate biosynthetic protein PdxA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04166
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04166_Pyridoxal_phosphate_biosynthetic_protein_PdxA


id: PF04168
description: A predicted alpha-helical domain with a conserved ER motif.
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04168
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04168_A_predicted_alpha-helical_domain_with_a_conserved_ER_motif.


id: PF04244
description: Deoxyribodipyrimidine photo-lyase-related protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04244
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04244_Deoxyribodipyrimidine_photo-lyase-related_protein


id: PF04277
description: Oxaloacetate decarboxylase, gamma chain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04277
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04277_Oxaloacetate_decarboxylase,_gamma_chain_


id: PF04290
description: Tripartite ATP-independent periplasmic transporters, DctQ component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04290
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04290_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component


id: PF04295
description: D-galactarate dehydratase / Altronate hydrolase, C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04295
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04295_D-galactarate_dehydratase_/_Altronate_hydrolase,_C_terminus


id: PF04307
description: LexA-binding, inner membrane-associated putative hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04307
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04307_LexA-binding,_inner_membrane-associated_putative_hydrolase


id: PF04313
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04313
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04313_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF04357
description: TamB, inner membrane protein subunit of TAM complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04357
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04357_TamB,_inner_membrane_protein_subunit_of_TAM_complex


id: PF04365
description: Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04365
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04365_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system


id: PF04371
description: Porphyromonas-type peptidyl-arginine deiminase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04371
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04371_Porphyromonas-type_peptidyl-arginine_deiminase


id: PF04413
description: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04413
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04413_3-Deoxy-D-manno-octulosonic-acid_transferase_(kdotransferase)


id: PF04445
description: Putative SAM-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04445
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04445_Putative_SAM-dependent_methyltransferase


id: PF04613
description: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04613
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04613_UDP-3-O-[3-hydroxymyristoyl]_glucosamine_N-acyltransferase,_LpxD__


id: PF04715
description: Anthranilate synthase component I, N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04715
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04715_Anthranilate_synthase_component_I,_N_terminal_region


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF04952
description: Succinylglutamate desuccinylase / Aspartoacylase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04952
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04952_Succinylglutamate_desuccinylase_/_Aspartoacylase_family


id: PF04966
description: Carbohydrate-selective porin, OprB family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04966
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF04966_Carbohydrate-selective_porin,_OprB_family


id: PF05015
description: RelE-like toxin of type II toxin-antitoxin system HigB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05015
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05015_RelE-like_toxin_of_type_II_toxin-antitoxin_system_HigB


id: PF05157
description: Type II secretion system (T2SS), protein E, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05157
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05157_Type_II_secretion_system_(T2SS),_protein_E,_N-terminal_domain


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05194
description: UreE urease accessory protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05194
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05194_UreE_urease_accessory_protein,_C-terminal_domain


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05201
description: Glutamyl-tRNAGlu reductase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05201
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05201_Glutamyl-tRNAGlu_reductase,_N-terminal_domain


id: PF05405
description: Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05405
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05405_Mitochondrial_ATP_synthase_B_chain_precursor_(ATP-synt_B)


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF05982
description: Na+-dependent bicarbonate transporter superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05982
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05982_Na+-dependent_bicarbonate_transporter_superfamily


id: PF05990
description: Alpha/beta hydrolase of unknown function (DUF900)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05990
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF05990_Alpha/beta_hydrolase_of_unknown_function_(DUF900)


id: PF06094
description: Gamma-glutamyl cyclotransferase, AIG2-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06094
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF06094_Gamma-glutamyl_cyclotransferase,_AIG2-like


id: PF06325
description: Ribosomal protein L11 methyltransferase (PrmA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06325
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF06325_Ribosomal_protein_L11_methyltransferase_(PrmA)


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06750
description: Bacterial Peptidase A24 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06750
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF06750_Bacterial_Peptidase_A24_N-terminal_domain


id: PF06808
description: Tripartite ATP-independent periplasmic transporter, DctM component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06808
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF06808_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component


id: PF06833
description: Malonate decarboxylase gamma subunit (MdcE)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06833
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF06833_Malonate_decarboxylase_gamma_subunit_(MdcE)


id: PF06835
description: Lipopolysaccharide-assembly, LptC-related
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06835
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF06835_Lipopolysaccharide-assembly,_LptC-related


id: PF07357
description: Dinitrogenase reductase ADP-ribosyltransferase (DRAT)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07357
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07357_Dinitrogenase_reductase_ADP-ribosyltransferase_(DRAT)


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07497
description: Rho termination factor, RNA-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07497
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07497_Rho_termination_factor,_RNA-binding_domain


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07662
description: Na+ dependent nucleoside transporter C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07662
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07662_Na+_dependent_nucleoside_transporter_C-terminus


id: PF07664
description: Ferrous iron transport protein B C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07664
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07664_Ferrous_iron_transport_protein_B_C_terminus


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07698
description: 7TM receptor with intracellular HD hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07698
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07698_7TM_receptor_with_intracellular_HD_hydrolase


id: PF07717
description: Oligonucleotide/oligosaccharide-binding (OB)-fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07717
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07717_Oligonucleotide/oligosaccharide-binding_(OB)-fold


id: PF07726
description: ATPase family associated with various cellular activities (AAA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07726
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07726_ATPase_family_associated_with_various_cellular_activities_(AAA)


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07963
description: Prokaryotic N-terminal methylation motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07963
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07963_Prokaryotic_N-terminal_methylation_motif


id: PF07991
description: Acetohydroxy acid isomeroreductase, NADPH-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07991
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07991_Acetohydroxy_acid_isomeroreductase,_NADPH-binding_domain


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08125
description: Mannitol dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08125
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08125_Mannitol_dehydrogenase_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08211
description: Cytidine and deoxycytidylate deaminase zinc-binding region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08211
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08211_Cytidine_and_deoxycytidylate_deaminase_zinc-binding_region_


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08334
description: Type II secretion system (T2SS), protein G
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08334
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08334_Type_II_secretion_system_(T2SS),_protein_G


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08379
description: Bacterial transglutaminase-like N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08379
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08379_Bacterial_transglutaminase-like_N-terminal_region


id: PF08392
description: FAE1/Type III polyketide synthase-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08392
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08392_FAE1/Type_III_polyketide_synthase-like_protein


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08471
description: Class II vitamin B12-dependent ribonucleotide reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08471
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08471_Class_II_vitamin_B12-dependent_ribonucleotide_reductase


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08546
description: Ketopantoate reductase PanE/ApbA C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08546
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08546_Ketopantoate_reductase_PanE/ApbA_C_terminal


id: PF08547
description: Complex I intermediate-associated protein 30 (CIA30)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08547
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08547_Complex_I_intermediate-associated_protein_30_(CIA30)


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF09619
description: Type III secretion system lipoprotein chaperone (YscW)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09619
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09619_Type_III_secretion_system_lipoprotein_chaperone_(YscW)


id: PF09678
description: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09678
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09678_Cytochrome_c_oxidase_caa3_assembly_factor_(Caa3_CtaG)


id: PF09721
description: Transmembrane exosortase (Exosortase_EpsH)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09721
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09721_Transmembrane_exosortase_(Exosortase_EpsH)


id: PF09822
description: ABC-type uncharacterized transport system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09822
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09822_ABC-type_uncharacterized_transport_system


id: PF09832
description: Uncharacterized protein conserved in bacteria (DUF2059)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09832
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09832_Uncharacterized_protein_conserved_in_bacteria_(DUF2059)


id: PF09835
description: Uncharacterized protein conserved in bacteria (DUF2062)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09835
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09835_Uncharacterized_protein_conserved_in_bacteria_(DUF2062)


id: PF09844
description: Uncharacterized conserved protein (COG2071)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09844
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09844_Uncharacterized_conserved_protein_(COG2071)


id: PF09966
description: Uncharacterized protein conserved in bacteria (DUF2200)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09966
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09966_Uncharacterized_protein_conserved_in_bacteria_(DUF2200)


id: PF09982
description: Uncharacterized protein conserved in bacteria (DUF2219)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09982
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF09982_Uncharacterized_protein_conserved_in_bacteria_(DUF2219)


id: PF10056
description: Uncharacterized conserved protein (DUF2293)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10056
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10056_Uncharacterized_conserved_protein_(DUF2293)


id: PF10077
description: Uncharacterized protein conserved in bacteria (DUF2314)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10077
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10077_Uncharacterized_protein_conserved_in_bacteria_(DUF2314)


id: PF10128
description: Glucose-6-phosphate dehydrogenase subunit N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10128
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10128_Glucose-6-phosphate_dehydrogenase_subunit_N-terminal_domain


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10417
description: C-terminal domain of 1-Cys peroxiredoxin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10417
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10417_C-terminal_domain_of_1-Cys_peroxiredoxin


id: PF10509
description: Galactokinase galactose-binding signature
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10509
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10509_Galactokinase_galactose-binding_signature


id: PF10518
description: TAT (twin-arginine translocation) pathway signal sequence
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10518
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10518_TAT_(twin-arginine_translocation)_pathway_signal_sequence


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10590
description: Pyridoxine 5-phosphate oxidase C-terminal dimerisation region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10590
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10590_Pyridoxine_5-phosphate_oxidase_C-terminal_dimerisation_region


id: PF10662
description: Ethanolamine utilisation - propanediol utilisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10662
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF10662_Ethanolamine_utilisation_-_propanediol_utilisation


id: PF11614
description: IG-like fold at C-terminal of FixG, putative oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11614
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF11614_IG-like_fold_at_C-terminal_of_FixG,_putative_oxidoreductase


id: PF11751
description: Type IX secretion system membrane protein PorP/SprF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11751
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF11751_Type_IX_secretion_system_membrane_protein_PorP/SprF


id: PF11818
description: C-terminal domain of tail specific protease (DUF3340)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11818
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF11818_C-terminal_domain_of_tail_specific_protease_(DUF3340)


id: PF12137
description: RNA polymerase recycling family C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12137
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12137_RNA_polymerase_recycling_family_C-terminal


id: PF12156
description: Putative metal-binding domain of cation transport ATPase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12156
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12156_Putative_metal-binding_domain_of_cation_transport_ATPase


id: PF12241
description: Trans-2-enoyl-CoA reductase catalytic region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12241
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12241_Trans-2-enoyl-CoA_reductase_catalytic_region


id: PF12242
description: NAD(P)H binding domain of trans-2-enoyl-CoA reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12242
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12242_NAD(P)H_binding_domain_of_trans-2-enoyl-CoA_reductase


id: PF12256
description: Insecticide toxin TcdB middle/N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12256
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12256_Insecticide_toxin_TcdB_middle/N-terminal_region


id: PF12399
description: Branched-chain amino acid ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12399
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12399_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: PF12441
description: CopG antitoxin of type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12441
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12441_CopG_antitoxin_of_type_II_toxin-antitoxin_system_


id: PF12625
description: Arabinose-binding domain of AraC transcription regulator, N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12625
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12625_Arabinose-binding_domain_of_AraC_transcription_regulator,_N-term


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12904
description: Putative collagen-binding domain of a collagenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12904
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12904_Putative_collagen-binding_domain_of_a_collagenase_


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF12974
description: ABC transporter, phosphonate, periplasmic substrate-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12974
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF12974_ABC_transporter,_phosphonate,_periplasmic_substrate-binding_protein_


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13090
description: Polyphosphate kinase C-terminal domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13090
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13090_Polyphosphate_kinase_C-terminal_domain_2


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13290
description: Chitobiase/beta-hexosaminidase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13290
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13290_Chitobiase/beta-hexosaminidase_C-terminal_domain


id: PF13306
description: BspA type Leucine rich repeat region (6 copies)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13306
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13306_BspA_type_Leucine_rich_repeat_region_(6_copies)


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13370
description: 4Fe-4S single cluster domain of Ferredoxin I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13370
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13370_4Fe-4S_single_cluster_domain_of_Ferredoxin_I


id: PF13385
description: Concanavalin A-like lectin/glucanases superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13385
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13385_Concanavalin_A-like_lectin/glucanases_superfamily


id: PF13386
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13386
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13386_Cytochrome_C_biogenesis_protein_transmembrane_region_


id: PF13416
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13416
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13416_Bacterial_extracellular_solute-binding_protein


id: PF13417
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13417
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13417_Glutathione_S-transferase,_N-terminal_domain


id: PF13442
description: Cytochrome C oxidase, cbb3-type, subunit III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13442
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13442_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_


id: PF13491
description: 4TM region of DNA translocase FtsK/SpoIIIE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13491
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13491_4TM_region_of_DNA_translocase_FtsK/SpoIIIE


id: PF13505
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13505
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13505_Outer_membrane_protein_beta-barrel_domain


id: PF13507
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13507
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13507_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13593
description: SBF-like CPA transporter family (DUF4137)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13593
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13593_SBF-like_CPA_transporter_family_(DUF4137)


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13720
description: Udp N-acetylglucosamine O-acyltransferase; Domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13720
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13720_Udp_N-acetylglucosamine_O-acyltransferase;_Domain_2


id: PF13722
description: 5TM C-terminal transporter carbon starvation CstA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13722
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13722_5TM_C-terminal_transporter_carbon_starvation_CstA


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13807
description: G-rich domain on putative tyrosine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13807
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF13807_G-rich_domain_on_putative_tyrosine_kinase


id: PF14390
description: Putative PD-(D/E)XK family member, (DUF4420)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14390
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14390_Putative__PD-(D/E)XK_family_member,_(DUF4420)


id: PF14400
description: Inactive transglutaminase fused to 7 transmembrane helices
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14400
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14400_Inactive_transglutaminase_fused_to_7_transmembrane_helices


id: PF14402
description: 7 transmembrane helices usually fused to an inactive transglutaminase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14402
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14402_7_transmembrane_helices_usually_fused_to_an_inactive_transglutaminase


id: PF14498
description: Glycosyl hydrolase family 65, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14498
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14498_Glycosyl_hydrolase_family_65,_N-terminal_domain


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14715
description: N-terminal domain of cytochrome oxidase-cbb3, FixP
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14715
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14715_N-terminal_domain_of_cytochrome_oxidase-cbb3,_FixP_


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14785
description: Maltose transport system permease protein MalF P2 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14785
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14785_Maltose_transport_system_permease_protein_MalF_P2_domain


id: PF14833
description: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14833
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14833_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase


id: PF14905
description: Outer membrane protein beta-barrel family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14905
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF14905_Outer_membrane_protein_beta-barrel_family


id: PF15780
description: Abnormal spindle-like microcephaly-assocd, ASPM-SPD-2-Hydin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15780
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF15780_Abnormal_spindle-like_microcephaly-assocd,_ASPM-SPD-2-Hydin


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16491
description: CAAX prenyl protease N-terminal, five membrane helices
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16491
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16491_CAAX_prenyl_protease_N-terminal,_five_membrane_helices


id: PF16576
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16576
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16576_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16841
description: Ca-dependent carbohydrate-binding module xylan-binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16841
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16841_Ca-dependent_carbohydrate-binding_module_xylan-binding


id: PF16917
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16917
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16917_Biotin/lipoate_A/B_protein_ligase_family


id: PF16927
description: N-terminal 7TM region of histidine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16927
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF16927_N-terminal_7TM_region_of_histidine_kinase


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17147
description: Pyruvate:ferredoxin oxidoreductase core domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17147
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF17147_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: PF17297
description: Phosphoenolpyruvate carboxykinase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17297
name:
  Protein Domains (Pfam).STRING_v12.0_583355_STRINGid_PF17297_Phosphoenolpyruvate_carboxykinase_N-terminal_domain


id: SM00044
description: Adenylyl- / guanylyl cyclase, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00044
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00044_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00226
description: Low molecular weight phosphatase family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00260
description: Two component signalling adaptor domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00260
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00260_Two_component_signalling_adaptor_domain


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00317
description: SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00317
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00317_SET_(Su(var)3-9,_Enhancer-of-zeste,_Trithorax)_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00332
description: Serine/threonine phosphatases, family 2C, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00332
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00332_Serine/threonine_phosphatases,_family_2C,_catalytic_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00346
description: Helix_turn_helix isocitrate lyase regulation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00346
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00346_Helix_turn_helix_isocitrate_lyase_regulation


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00354
description: Helix_turn _helix lactose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00354
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00354_Helix_turn__helix_lactose_operon_repressor


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00460
description: Transglutaminase/protease-like homologues
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00460
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00460_Transglutaminase/protease-like_homologues


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00508
description: Cysteine-rich motif following a subset of SET domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00508
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00508_Cysteine-rich_motif_following_a_subset_of_SET_domains


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00554
description: Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00554
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00554_Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.


id: SM00562
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00758
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00758
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00758_Domain_in_bacterial_beta-glucosidases_other_glycosidases,_glycosyltransferases,_proteases,_amidases,_yeast_adhesins,_and_bacterial_toxins.

description:
  Domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00833
description: Cobalamin synthesis protein cobW C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00833
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00833_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00847
description: Helicase associated domain (HA2) Add an annotation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00847
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00847_Helicase_associated_domain_(HA2)__Add_an_annotation


id: SM00854
description: Bacterial capsule synthesis protein PGA_cap
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00854
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00854_Bacterial_capsule_synthesis_protein_PGA_cap


id: SM00858
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00880
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00880
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00880_The_CHAD_domain_is_an_alpha-helical_domain_functionally_associated_with_some_members_of_the_adenylate_cyclase_family_._It_has_conserved_histidines_that_may_chelate_metals.

description:
  The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family . It has conserved histidines that may chelate metals.


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00898
description: Formamidopyrimidine-DNA glycosylase N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00898
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00898_Formamidopyrimidine-DNA_glycosylase_N-terminal_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00900
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00900
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00900_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00941
description: Pyrimidine nucleoside phosphorylase C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00941
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00941_Pyrimidine_nucleoside_phosphorylase_C-terminal_domain


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00956
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00965
description: Secretin and TonB N terminus short domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00965
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00965_Secretin_and_TonB_N_terminus_short_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00982
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00992
description: Hemimethylated DNA-binding protein YccV like
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00992
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00992_Hemimethylated_DNA-binding_protein_YccV_like


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01080
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01080
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01080_CHASE2_is_an_extracellular_sensory_domain,_which_is_present_in_various_classes_of_transmembrane_receptors_that_are_parts_of_signal_transduction_pathways_in_bacteria._Specifically,_CHASE2_domains_are_found_in_histidine_kinases,_adenylate_cyclases,_...

description:
  CHASE2 is an extracellular sensory domain, which is present in various classes of transmembrane receptors that are parts of signal transduction pathways in bacteria. Specifically, CHASE2 domains are found in histidine kinases, adenylate cyclases, ...


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01103
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01103
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01103_Escherichia_coli_YhbY_is_associated_with_pre-50S_ribosomal_subunits,_which_implies_a_function_in_ribosome_assembly._GFP_fused_to_a_single-domain_CRM_protein_from_maize_localises_to_the_nucleolus,_suggesting_that_an_analogous_activity_may_have_been_...

description:
  Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been ...


id: SM01118
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01118
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01118_These_sequences_are_functionally_identified_as_members_of_the_adenylate_cyclase_family,_which_catalyses_the_conversion_of_ATP_to_3,5-cyclic_AMP_and_pyrophosphate._Six_distinct_non-homologous_classes_of_AC_have_been_identified._The_structure_of_...

description:
  These sequences are functionally identified as members of the adenylate cyclase family, which catalyses the conversion of ATP to 3,5-cyclic AMP and pyrophosphate. Six distinct non-homologous classes of AC have been identified. The structure of ...


id: SM01131
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01131
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01131_This_domain_is_often_found_adjacent_to_the_DHH_domain_PF01368_and_is_called_DHHA2_for_DHH_associated_domain._This_domain_is_diagnostic_of_DHH_subfamily_2_members_(PUBMED:9478130)._The_domain_is_about_120_residues_long_and_contains_a_conserved_DXK_...

description:
  This domain is often found adjacent to the DHH domain PF01368 and is called DHHA2 for DHH associated domain. This domain is diagnostic of DHH subfamily 2 members (PUBMED:9478130). The domain is about 120 residues long and contains a conserved DXK ...


id: SM01204
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01204
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01204_The_FIST_C_domain_is_a_novel_sensory_domain,_which_is_present_in_signal_transduction_proteins_from_Bacteria,_Archaea_and_Eukarya._Chromosomal_proximity_of_FIST-encoding_genes_to_those_coding_for_proteins_involved_in_amino_acid_metabolism_and_...

description:
  The FIST C domain is a novel sensory domain, which is present in signal transduction proteins from Bacteria, Archaea and Eukarya. Chromosomal proximity of FIST-encoding genes to those coding for proteins involved in amino acid metabolism and ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01231
description: Signal transducing histidine kinase, homodimeric domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01231
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01231_Signal_transducing_histidine_kinase,_homodimeric_domain


id: SM01232
description: Formamidopyrimidine-DNA glycosylase H2TH domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01232
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01232_Formamidopyrimidine-DNA_glycosylase_H2TH_domain


id: SM01234
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01350
description: 6-phosphogluconate dehydrogenase, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01350
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01350_6-phosphogluconate_dehydrogenase,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_583355_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


