# geneInfo

ensembl_gene_id: azo3483
symbol: azo3483
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to rsc2374 of R. solanacearum of 39% (trembl|Q8XWU6). no domains predicted. signal peptide. TMH in signal peptide; Conserved hypothetical protein.


ensembl_gene_id: azo3484
symbol: torD
gene_biotype: protein_coding
description:
  Putative Chaperone protein TorD. Homology to torD of E. coli of 23% (sprot|TORD_ECOLI). This family consists of several bacterial TorD proteins. Many prokaryotic molybdoenzymes, for example the TMAO reductase (TorA) of Escherichia coli, require the insertion of a bis(molybdopterin guanine dinucleotide) molybdenum (bis(MGD)Mo) cofactor in its catalytic site to be active and translocated to the periplasm. The TorD chaperone increases apoTorA activation up to four-fold, allowing maturation of most of the apoprotein. Therefore TorD is involved in the first step of TorA maturation to make i [...]


ensembl_gene_id: azo3485
symbol: azo3485
gene_biotype: protein_coding
description:
  Conserved hypothetical iron-sulfur binding protein. Homology to pb1470 of B. pertussis of 48% (trembl|Q7VY84). Transfer of electrons in a wide variety of metabolic reactions. InterPro: 4Fe-4S ferredoxin iron-sulfur binding domain (IPR001450). Pfam: 4Fe-4S binding domain. no signal peptide. no TMHs; Family membership.


ensembl_gene_id: azo3486
symbol: azo3486
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to RS01168 of R.solanacearum of 40% (trembl:Q8XWU3). No domains predicted. No signal peptide or TMH reported present.


ensembl_gene_id: azo3487
symbol: azo3487
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to BPP1929 of B.parapertussis of 34% (trembl:34%). No signal peptide or TMH reported present. No domains predicted.


ensembl_gene_id: azo3488
symbol: fdhD
gene_biotype: protein_coding
description:
  Putative formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: azo3489
symbol: mobA
gene_biotype: protein_coding
description:
  Probable molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: azo3490
symbol: azo3490
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to ebA2947 of Azoarcus sp. EbN1 of 58% (gnl|keqq|eba:ebA2947(KEGG)). No domains predicted. No signal peptide. No TMHs.


ensembl_gene_id: azo3491
symbol: mobB2
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein B. MAY BIND THE GUANINE NUCLEOTIDE REQUIRED FOR THE SYNTHESIS OF MOLYBDOPTERIN GUANINE DINUCLEOTIDE. InterPro: ATP/GTP-binding site motif A (P-loop) TIGRFAM: mobB: molybdopterin-guanine dinucleotide; High confidence in function and specificity.


ensembl_gene_id: azo3492
symbol: azo3492
gene_biotype: protein_coding
description:
  Putative sensor histidine kinase, His_kinA_N. IPR009082; His_kin_homodim. IPR003660; HAMP. IPR003594; ATPbind_ATPase. Pfam: PF02518; HATPase_c. PF00512; HisKA. PF00672; HAMP. SMART: SM00387; HATPase_c. SM00388; HisKA. SM00304; HAMP. TMHMM reporting 2 transmembrane helices; Specificity unclear.


ensembl_gene_id: azo3493
symbol: sasR
gene_biotype: protein_coding
description:
  Probable sigma-54 dependent response regulator,AAA_ATPase. IPR008931; FIS-like. IPR002197; HTH_Fis. IPR010114; NtrC. IPR001789; Response_reg. IPR008298; Res_reg_NtrC. IPR002078; Sig54_interact. Pfam: PF02954; HTH_8. PF00072; Response_reg. PF00158; Sigma54_activat. SMART: SM00382; AAA. SM00448; REC. HTH reporting reporting nucleic acid binding motif; Family membership.


ensembl_gene_id: azo3494
symbol: azo3494
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to CV0155 of Chromobacterium violaceum of 69% (trembl|Q7P1Q8). Has PF03653, Uncharacterised protein family (UPF0093);IPR005265, Cons_hypoth701:It appears the conserved hypothetical integral membrane proteins of this family are found only in gram negative bacteria and their function is unknown. No signal peptide. 4 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3496
symbol: ascD
gene_biotype: protein_coding
description:
  Probable CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase. Homology to ascD of Y. pestis of 41% (sprot|ASCD_YERPE). PARTICIPATES IN THE CONVERSION OF CDP-6-DEOXY-D-GLYCERO- L-THREO-4-HEXULOSE TO 36-DIDEOXY-D-GLYCERO-D-GLYCERO-4-HEXULOSE TOGETHER WITH CDP-6-DEOXY-D-GLYCERO-L-THREO-4-HEXULOSE-3-DEHYDRASE (E1) IN TWO CONSECUTIVE STEPS. THE DETAILED MECHANISM OF E3 IS NOT YET RESOLVED. InterPro: Oxidoreductase FAD and NAD(P)-binding domain (IPR001433); NadH:cytochrome b5 reductase (CBR) (IPR000134); 2Fe-2S Ferredoxin (IPR006057); Phenol hydroylase reductase family (IPR001221) [...]


ensembl_gene_id: azo3498
symbol: azo3498
gene_biotype: protein_coding
description:
  Putative sensor protein, no significant homology. Best Hit SWISSPROT: sprot|ZRAS_SALTY (10% Salmonella typhimurium, ZraS) InterPro: IPR003594; ATPbind_ATPase. IPR004358; Bact_sens_pr_C. IPR005467; His_kinase. Pfam: PF02518; HATPase_c. PF00512; HisKA. SMART: SM00387; HATPase_c. SM00388; HisKA. Signal P reporting signal peptide. Sensor protein zraS (EC 2.7.3.-). Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium (By similarity).


ensembl_gene_id: azo3499
symbol: azo3499
gene_biotype: protein_coding
description:
  Conserved hypothetical signaling protein. Homology to Daro03001340 of Dechloromonas aromatica of 45% (gi|53730727|ref|ZP_00348932.1|(NBCI ENTREZ)). InterPro: IPR000160 GGDEF. IPR000014 PAS. IPR000700 PAS-assoc_C. IPR001789 Response_reg. IPR001633 EAL. Pfam: PF00990 GGDEF domain. PF00989 PAS domain. PF00563 EAL domain. PF00072 Response_reg. TIGRFAM: TIGR00229 PAS domain S-box. TIGR00254 putative diguanylate cyclase (GGDEF) domain; Conserved hypothetical protein.


ensembl_gene_id: azo3500
symbol: cyt2
gene_biotype: protein_coding
description:
  Probable cytochrome c-552 precursor. Homology to cyt of N. europaea of 52% (AAB46987). ELECTRON DONOR FOR CYTOCHROME CD1 IN NITRITE AND NITRATE RESPIRATION. InterPro: Cytochrome c class I (IPR003088); cytochrome c,class ID (IPR002324) Pfam: cytochrome c signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3501
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: azo3502
symbol: ureF
gene_biotype: protein_coding
description:
  Probable urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: azo3503
symbol: ureE
gene_biotype: protein_coding
description:
  Probable urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: azo3504
symbol: ureC
gene_biotype: protein_coding
description:
  Urease alpha subunit. Homology to ureC of S. meliloti of 75% (sprot|URE1_RHIME). Urease (urea amidohydrolase, EC: 3.5.1.5) catalyses the hydrolysis of urea to form ammonia and carbamate. The enzyme consists of three structural domains: an alpha subunit (with the C-terminal two-thirds representing the catalytic domain), a beta subunit and a gamma subunit. Pfam: Urease alpha-subunit, catalytic domain; Urease alpha-subunit N-terminal domain no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3505
symbol: ureB
gene_biotype: protein_coding
description:
  Probable urease beta subunit; Region start changed from 3848352 to 3848310 (-42 bases); Belongs to the urease beta subunit family.


ensembl_gene_id: azo3506
symbol: azo3506
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to Daro03003730 of Dechloromonas aromatica of 40% (gi|46140350|ref|ZP_00203571.1|(NBCI ENTREZ)). no domains predicted. no signal peptide. no TMHs; Family membership.


ensembl_gene_id: azo3507
symbol: ureA
gene_biotype: protein_coding
description:
  Urease gamma subunit. Homology to ureA of S. meliloti of 71% (sprot|URE3_RHIME) Urease (urea amidohydrolase, EC: 3.5.1.5) catalyses the hydrolysis of urea to form ammonia and carbamate. The enzyme consists of three structural domains: an alpha subunit (with the C-terminal two-thirds representing the catalytic domain), a beta subunit and a gamma subunit. InterPro: Urease gamma subunit (IPR002026) Pfam: urease, gamma subunit Tigrfam: urease_gam: urease gamma subunit no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3508
symbol: ureD
gene_biotype: protein_coding
description:
  Putative urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: azo3509
symbol: gch
gene_biotype: protein_coding
description:
  Probable GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: azo3511
symbol: azo3511
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to PA0234 of P.aeruginosa of 43% (trembl:Q9I6Q4). No domains predicted. Signal peptide present. No TMH present; Conserved hypothetical protein.


ensembl_gene_id: azo3512
symbol: ssuA
gene_biotype: protein_coding
description:
  Putative periplasmic-binding protein; Part of the ABC transporter complex ssuABC involved in aliphatic sulfonates import.Similar to the putative periplasmic-binding protein ssuA precursor in E.coli. SSUA_BACSU:P40400. InterPro:IPR000437; Prok_lipoprot_S. IPR001638; SBP_bac_3. SMART: SM00062; PBPb; 1. TMhelix:1. Signal peptide: present; Specificity unclear.


ensembl_gene_id: azo3513
symbol: azo3513
gene_biotype: protein_coding
description:
  Putative aliphatic sulfonates transport system,ATP-binding protein; Region start changed from 3855391 to 3855571 (-180 bases).


ensembl_gene_id: azo3514
symbol: ssuC
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex ssuABC involved in aliphatic sulfonates import. Probably responsible for the translocation of the substrate across the membrane.26% Similar to the aliphatic sulfonates permease protein, ssuC in E.coli. SWISSPROT:SSUC_ECOLI: P75851 InterPro:IPR000515; BPD_transp. Pfam:PF00528; BPD_transp; 1. InterPro:PF00528: Binding-protein-dependent transport systems inner membrane component. TMhelix:6; Specificity unclear.


ensembl_gene_id: azo3516
symbol: wrbA3
gene_biotype: protein_coding
description:
  Probable tryptophan repressor binding protein (flavodoxin); Flavoprotein wrbA3. TREMBL:Q8PGA8: 53% identity,66% similarity. wrbA3 is 26% identical to wrbA1 and 23% identical to wrbA2 InterPro: IPR008254; Flav_nitox_synth. IPR001226; Flavodoxin. Pfam:PF00258: flavodoxin; TIGR00301: NADP oxidoreductase coenzyme Number of transmembrane helices:0; High confidence in function and specificity.


ensembl_gene_id: azo3517
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: azo3518
symbol: cobD2
gene_biotype: protein_coding
description:
  Putative cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: azo3519
symbol: cobC
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein, CobC. CobC is probable involved in the conversion of cobyric acid to cobinamide.Similar to pir|B83486 (48%) and to sprot|COBC_PSEDE (42%). InterPro (PF00155): Aminotransferases class-I and II; Specificity unclear.


ensembl_gene_id: azo3520
symbol: btuF
gene_biotype: protein_coding
description:
  Vitamin B12 transport protein btuF precursor. 34% Similar to BtuF from E.coli. Part of the binding-protein-dependent transport system for vitamin B12. Acts with btuCD to transport vitamin B12 across the inner membrane. SWISSPROT:BTUF_ECOLI:P37028 InterPro:IPR002491; Peripla_BP. Pfam: PF01497; Peripla_BP_2; 1. Signal peptide: present. Contains 1 iron siderophore/cobalamin periplasmic-binding domain; High confidence in function and specificity.


ensembl_gene_id: azo3521
symbol: azo3521
gene_biotype: protein_coding
description:
  Conserved hypothetical peptidase. Homology to ebA3686 of Azoarcus sp. EbN1 of 45% (gnl|keqq|eba:ebA3686(KEGG)). Pfam: Peptidase family M48. signal peptide. 1 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3522
symbol: rhlE3
gene_biotype: protein_coding
description:
  Putative ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: azo3523
symbol: leuA2
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: azo3524
symbol: azo3524
gene_biotype: protein_coding
description:
  Conserved hypothetical nitroreductase. Homology to cv1555 of C. violaceum of 72% (trembl|Q7NXS1). Involved in the reduction of nitrogen containing compounds. InterPro: Nitroreductase family (IPR000415). Pfam: Nitroreductase family. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3526
symbol: azo3526
gene_biotype: protein_coding
description:
  Conserved hypothetical flavoprotein. Homology to tde2498 of T. denticola of 46% (tremblnew|AAS13015). InterPro: Metallo-beta-lactamase superfamily (IPR001279). Pfam: Metallo-beta-lactamase superfamily. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3528
symbol: azo3528
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to blr3274 of B. japonicum of 33% (gnl|keqq|bja:blr3274(KEGG)). Pfam: weak hit to CbiM, an integral membrane protein involved in cobalamin synthesis. TMHMM reporting 5 transmembrane helices. No signal peptide; Conserved hypothetical protein.


ensembl_gene_id: azo3529
symbol: azo3529
gene_biotype: protein_coding
description:
  Probable Precorrin-4 C11-methyltransferase,47% Identity to TrEMBL;Q8GDX1, O26702. SwissProt;O87696. Has PF00590, Tetrapyrrole (Corrin/Porphyrin) Methylases;IPR000878 Cor/por_Metransf; This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function, including P45528. This family includes the methylase Dipthine synthase. Uroporphyrin-III C-methyltransferase (EC: 2.1.1.107) (SUMT)catalyzes the transfer of two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yiel [...]


ensembl_gene_id: azo3530
symbol: cbiX
gene_biotype: protein_coding
description:
  CbiX conserved hypothetical protein. Function unknown. Cobalamin biosynthesis pathway; Function unclear.


ensembl_gene_id: azo3531
symbol: cbiC
gene_biotype: protein_coding
description:
  Precorrin-8X methylmutase. CATALYZES THE CONVERSION OF PRECORRIN-8X TO HYDROGENOBYRINIC ACID; A Cobalamin biosynthesis precorrin isomerase. METHYL MIGRATION REACTION DURING THE TRANSFORMATION OF PRECORRIN-3 TO FORM COBYRINIC ACID (BY SIMILARITY). InterPro: Precorrin-8X methylmutase CbiC/CobH TIGRFAM: redox_disulf_1: redox-active disulfide; High confidence in function and specificity.


ensembl_gene_id: azo3533
symbol: cbiE
gene_biotype: protein_coding
description:
  Precorrin-6Y C(5,15)-methyltransferase (decarboxylating); Precorrin-6 methyltransferase (Precorrin-6Y methylase). CATALYZES THE METHYLATION OF BOTH C-5 AND C-15 IN PRECORRIN-6Y TO FORM PRECORRIN-8X. InterPro: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; High confidence in function and specificity.


ensembl_gene_id: azo3534
symbol: cbiL
gene_biotype: protein_coding
description:
  Precorrin-2 C20-methyltransferase (EC 2.1.1.130) (S-adenosyl-L- methionine:precorrin-2 methyltransferase) (SP2MT). METHYLATES PRECORRIN-2 AT THE C-20 POSITION TO PRODUCE PRECORRIN-3A; High confidence in function and specificity.


ensembl_gene_id: azo3535
symbol: cbiGa
gene_biotype: protein_coding
description:
  Putative Cobalamin (vitamin B12) biosynthesis CbiG protein, truncated. Homology to the N-terminus of cbiG of b. magaterium of 39% (gi|3724046|emb|CAA04315.1|(nr)). Pfam: CibG, CbiG proteins are required for cobalamin (vitamin B 12) biosynthesis. IPR012407: Cobalamin (vitamin B12) biosynthesis CbiG. CbiG is one of the enzymes specific to the anaerobic route of cobalamin biosynthesis e.g., in Salmonella typhimurium. While its specific role in this pathway is not known yet, it has been speculated that CbiG may participate in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6. Th [...]


ensembl_gene_id: azo3536
symbol: cbiGb
gene_biotype: protein_coding
description:
  Putative Cobalamin (vitamin B12) biosynthesis CbiG protein, truncated; C-terminal part of CbiG protein. Cobalamin biosynthesis pathway.Precorrin methylase; High confidence in function and specificity.


ensembl_gene_id: azo3537
symbol: cbiH
gene_biotype: protein_coding
description:
  Precorrin-3B C17- methyltransferase. METHYLTRANSFERASE THAT CATALYZES THE METHYLATION OF C-17 IN PRECORRIN-3B TO FORM PRECORRIN-4 (BY SIMILARITY). InterPro: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; High confidence in function and specificity.


ensembl_gene_id: azo3538
symbol: azo3538
gene_biotype: protein_coding
description:
  Conserved hypothetical ferredoxin. Homology to rsp0627 of R. solanacearum of 46% (trembl|Q8XS54). Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3540
symbol: azo3540
gene_biotype: protein_coding
description:
  Conserved hypothetical transcriptional regulatory protein. Homology to rsc0599 of R. solanacearum of 63% (trembl|Q8Y1U0). InterPro: Bacterial regulatory proteins GntR family (IPR000524). Pfam: Bacterial regulatory protein, gntR family; Aminotransferase classI and II. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3541
symbol: azo3541
gene_biotype: protein_coding
description:
  Hypothetical methyltransferase. no Homology of the entire protein with the data bank. Pfam: Putative methyltransferase This is a family of hypothetical proteins which are putative methyltransferases. The aligned region contains the GXGXG S-AdoMet binding site suggesting a putative methyltransferase activity. Interpro: SAM (and some other nucleotide) binding motif(IPR000051) no signal peptide no TMHs.


ensembl_gene_id: azo3542
symbol: azo3542
gene_biotype: protein_coding
description:
  Conserved hypothetical glutathione transferase. Homology to psto0703 of P. syringae of 74% (trembl|Q889P6). Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism Pfam. Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal. no signal peptide. no TMHs; Family membership.


ensembl_gene_id: azo3543
symbol: azo3543
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. No homology of the entire protein to the data bank. Pfam: DUF1555 (domain of unknown function). signal peptide. no TMHs.


ensembl_gene_id: azo3544
symbol: azo3544
gene_biotype: protein_coding
description:
  Probable 4-hydroxybutyrate coenzyme A transferase. Homology to cat2 of C. kluyveri of 43% (sprot|CAT2_CLOKL) InterPro: Acetyl-CoA hydrolase/transferase (IPR003702) Pfam: Acetyl-CoA hydrolase/transferase no signal peptide no TMHS; Family membership.


ensembl_gene_id: azo3545
symbol: yeaS
gene_biotype: protein_coding
description:
  Conserved hypothetical transport membrane protein. Homology to rsc1520 of R. solanacearum of 59% (trembl|Q8XZ84). Pfam: LysE type translocator. Tigrfam: 2A76: Homoserine/Threonine efflux protein. no signal peptide. probable 6 TMHs; Family membership.


ensembl_gene_id: azo3546
symbol: ctaQ
gene_biotype: protein_coding
description:
  Probable carboxypeptidase TAQ; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: azo3548
symbol: azo3548
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to cv0063 of C. violaceum of 41% (trembl|Q7P1Z9(SRS)). no domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3549
symbol: psD
gene_biotype: protein_coding
description:
  Probable phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: azo3550
symbol: cobB
gene_biotype: protein_coding
description:
  Cobyrinic acid AC-diamide synthase. Responsible for the amidation of carboxylic groups at position A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP is hydrogenolyzed for each amidation (By similarity). cbiA: cobyrinic acid ac-diamide synthase; High confidence in function and specificity.


ensembl_gene_id: azo3551
symbol: cobA2
gene_biotype: protein_coding
description:
  Uroporphyrin-III C-methyltransferase (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM). TIGRFAM: dph5: diphthine synthase; High confidence in function and specificity; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: azo3552
symbol: cobO
gene_biotype: protein_coding
description:
  Cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: azo3553
symbol: azo3553
gene_biotype: protein_coding
description:
  Putative ABC-type transporter, ATPase component; 37% Similar to the iron(III)-hydroxamate transport membrane protein, fhuC in E.coli.Part of the ABC transporter complex fhuACDB involved in iron(III)-hydroxamate import. Probably responsible for energy coupling to the transport system. SWISSPROT:FHUC_ECOLI:P07821 InterPro:IPR003593; AAA_ATPase.IPR003439; ABC_transporter. Pfam:PF00005; ABC_tran; 1; High confidence in function and specificity.


ensembl_gene_id: azo3554
symbol: azo3554
gene_biotype: protein_coding
description:
  Putative ABC transporter system, permease protein; Region start changed from 3899167 to 3899122 (-45 bases); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: azo3556
symbol: azo3556
gene_biotype: protein_coding
description:
  Putative outer membrane TonB-dependent receptor,probably involved in iron metabolism. 20% Similar to the IrgA enterobactine outer membrane receptor in V. cholerae. INVOLVED IN THE INITIAL STEP OF IRON UPTAKE BY BINDING FERRIC VIBRIOBACTIN AN IRON CHELATIN SIDEROPHORE THAT ALLOWS V.CHOLERAE TO EXTRACT IRON FROM THE ENVIRONMENT. SWISSPROT:IRGA_VIBCH:P27772. 21% TonB_boxC. Pfam:PF00593; TonB_dep_Rec; 1; Specificity unclear.


ensembl_gene_id: azo3557
symbol: cobU
gene_biotype: protein_coding
description:
  Cobinamide kinase/cobinamide phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: azo3558
symbol: azo3558
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to gsu0462 of G. sulfurreducens of 41% (AAR33794). probable 2 TMHs. no signal peptide. No domains predicted; Conserved hypothetical protein.


ensembl_gene_id: azo3559
symbol: azo3559
gene_biotype: protein_coding
description:
  Hypothetical membrane protein. No homology of the whole protein to the data bank. Has PF05987, Bacterial protein of unknown function (DUF898);IPR010295; This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative membrane proteins. No signal peptide 6 TMHs.


ensembl_gene_id: azo3560
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: azo3561
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin (5'-phosphate) synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: azo3562
symbol: azo3562
gene_biotype: protein_coding
description:
  Alpha-ribazole-5-phosphate phosphatase. Converts N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole into N1-alpha-D-ribosyl-5,6-dimethylbenzimidazole; involved in the assembly of the nucleotide loop of cobalamin. 27% PG/BPGM_mutase. Pfam:PF00300; PGAM; 1; High confidence in function and specificity.


ensembl_gene_id: azo3564
symbol: rfaD
gene_biotype: protein_coding
description:
  Putative ADP-L-glycero-D-mannoheptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: azo3566
symbol: waaC2
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase-1 (EC 2.-.-.-). HEPTOSE TRANSFER TO THE LIPOPOLYSACCHARIDE CORE. IT TRANSFERS THE INNNERMOST HEPTOSE TO [4-P](3-DEOXY-D-MANNO-OCTULOSONIC ACID)2-IVA. S18: ribosomal protein S18; High confidence in function and specificity.


ensembl_gene_id: azo3568
symbol: waaP1
gene_biotype: protein_coding
description:
  Lipopolysaccharide core biosynthesis protein; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.


ensembl_gene_id: azo3569
symbol: waaP2
gene_biotype: protein_coding
description:
  Lipopolysaccharide core biosynthesis protein rfaP. INVOLVED IN ATTACHMENT OF PHOSPHATE-CONTAINING SUBSTITUENTS TO THE INNER CORE. Specific function unclear.


ensembl_gene_id: azo3570
symbol: waaP3
gene_biotype: protein_coding
description:
  Lipopolysaccharide core biosynthesis protein. INVOLVED IN ATTACHMENT OF PHOSPHATE-CONTAINING SUBSTITUENTS TO THE INNER CORE. Specific function unclear.


ensembl_gene_id: azo3571
symbol: azo3571
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro: Eukaryotic protein kinase. Might be related to lipopolysaccharide biosynthesis, due to the presence of the gene in a lipopolysaccharide gene cluster.


ensembl_gene_id: azo3573
symbol: azo3573
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, 43% identity(65% similarity) to TrEMBL|Q9HUG7,Hypothetical protein PA4998 [PA4998] [Pseudomonas aeruginosa]. Has PF06293:IPR010440:Lipopolysaccharide kinase (Kdo/WaaP) family;These lipopolysaccharide kinases are related to protein kinases Pkinase. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it  [...]


ensembl_gene_id: azo3574
symbol: azo3574
gene_biotype: protein_coding
description:
  Hypothetical membrane protein. Homology to pspto4986 of P. syringae of 28% (trembl|Q87VF1(SRS)) No domains predicted signal peptide 9 TMHs.


ensembl_gene_id: azo3577
symbol: azo3577
gene_biotype: protein_coding
description:
  Hypothetical protein predicted by Glimmer/Critica; Possibly related to cell surface polysaccharide biosynthesis, due to the presence of the gene in a polysaccharide synthesis gene cluster.


ensembl_gene_id: azo3579
symbol: nolU
gene_biotype: protein_coding
description:
  Putative carbamoyltransferase. Homology to nolU of Rhizobium sp. NGR234 of 33% InterPro: Carbamoyltransferase Pfam: Carbamoyltransferase no signal peptide no TMHs; Family membership.


ensembl_gene_id: azo3580
symbol: azo3580
gene_biotype: protein_coding
description:
  Putative acyltransferase family protein; Catalysis of the reactions of the type: acyl-carrier + reactant = acyl-reactant + carrier. Entry name : Q888M0 InterPro : IPR002656; Acyl_transf_3. Identity: 227/677 (33%) Pfam PF01757; Acyl_transf_3; 1. Prediction: Non-secretory protein Signal peptide probability: 0.005(almost Yes) Number of predicted TMHs: 10; Family membership.


ensembl_gene_id: azo3581
symbol: capD
gene_biotype: protein_coding
description:
  Putative capsular polysaccharide biosynthesis protein; 48% Polysac_CapD. Pfam:PF02719; Polysacc_synt_2; 1; High confidence in function and specificity.


ensembl_gene_id: azo3582
symbol: azo3582
gene_biotype: protein_coding
description:
  Membrane protein involved in cell envelope biogenesis; Similar to proteins annotated as phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP- MurNAc-pentapeptide phosphotransferase). First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (By similarity); Function unclear.


ensembl_gene_id: azo3585
symbol: azo3585
gene_biotype: protein_coding
description:
  Glycosyltransferase; Putative glycosyl transferase MJ1057 (EC 2.-.-.-). InterPro: Glycosyl transferase family 2; Family membership.


ensembl_gene_id: azo3586
symbol: fcl1
gene_biotype: protein_coding
description:
  Putative GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: azo3587
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: azo3588
symbol: azo3588
gene_biotype: protein_coding
description:
  Hypothetical membrane protein. No homology to the data bank. No domains predicted. no signal peptide. 9 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3589
symbol: azo3589
gene_biotype: protein_coding
description:
  Glycosyltransferase; InterPro: Glycosyl transferase family 2. Slight similarity to dolicholphosphate mannosyltransferases,might therefore transfer a sugar moiety directly to a lipid carrier; Specificity unclear.


ensembl_gene_id: azo3590
symbol: emrE
gene_biotype: protein_coding
description:
  Hypothetical multidrug efflux transporter protein; Low similarity with the EmrE protein (Methyl viologen resistance protein C)(Ethidium resistance protein)in E.coli. Multidrug transporter. Confers resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. Probably prevents the incorporation of methyl viologen into cells. Involved in ethidium bromide efflux. EMRE_ECOLI:P23895. InterPro:IPR000390; Smr. Pfam: PF00893; Multi_Drug_Res; 1. Signal peptide present. TMHelix: 4; High confidence in function and specificity.


ensembl_gene_id: azo3592
symbol: azo3592
gene_biotype: protein_coding
description:
  Hypothetical protein predicted by Glimmer/Critica; Gene located in a gene cluster related to an unidentified cell surface polysaccharide.


ensembl_gene_id: azo3593
symbol: azo3593
gene_biotype: protein_coding
description:
  Hypothetical membrane protein. No good homology of the entire protein with the data bank. No domains predicted. No signal peptide. 1 TMH.


ensembl_gene_id: azo3596
symbol: wzt
gene_biotype: protein_coding
description:
  Putative polysaccharide export transport system ATP-binding protein; 44% AAA_ATPase.IPR003439; ABC_transporter. Pfam:PF00005; ABC_tran; 1. ProDom:PD000006; ABC_transporter; 1. SMART:SM00382; AAA; 1.


ensembl_gene_id: azo3597
symbol: wzm
gene_biotype: protein_coding
description:
  Putative permease component of an ABC polysaccharide exporter; 51% ABC_transpt2. Pfam:PF01061; ABC2_membrane; 1. TMhelix:6. Non-secretory protein; Specificity unclear.


ensembl_gene_id: azo3598
symbol: azo3598
gene_biotype: protein_coding
description:
  Hypothetical protein predicted by Glimmer/Critica; Possibly related to cell surface biosynthesis, ue to the location of he gene in a polysaccharide synthesis gene cluster.


ensembl_gene_id: azo3600
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: azo3601
symbol: azo3601
gene_biotype: protein_coding
description:
  Hypothetical protein PA4923. TREMBL:Q82UL5: 68% identity, 82% similarity InterPro:IPR005269; Cons_hypoth730. Pfam:PF03641; Lysine_decarbox; 1. TIGRFAMs:TIGR00730; Cons_hypoth730 bcl-2: Apoptosis regulator Non-secretory protein with signal peptide probability 0(Signal P predicted9 Absence of transmembrane helices (TMHHH predicted); Function unclear; Belongs to the LOG family.


ensembl_gene_id: azo3602
symbol: azo3602
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to CV0777 of C.violaceum of 42% (trembl|Q7NZZ2(SRS)). No domains predicted. Signal peptide present. No TMH reported; Conserved hypothetical protein.


ensembl_gene_id: azo3604
symbol: thrB
gene_biotype: protein_coding
description:
  Probable homoserine kinase. Homology to thrB of M. flagellum of 51% (sprot|KHSE_METFL). CATALYTIC ACTIVITY: ATP + L-homoserine = ADP + O-phospho-L-homoserine. Pfam: Aminoglycoside phosphotransferase no signal peptide no TMHs; High confidence in function and specificity; Belongs to the pseudomonas-type ThrB family.


ensembl_gene_id: azo3605
symbol: azo3605
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to cv0192 of C. violaceum of 32% (trembl|Q7P1M1(SRS)). No domains predicted. No signal peptide. 6 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3606
symbol: azo3606
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to ne1472 of N. europaea of 33% (trembl|Q82UL2(SRS)). No domains predicted. No signal peptide. 6 TMHs.


ensembl_gene_id: azo3607
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: azo3608
symbol: rsfS
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: azo3609
symbol: rlmH
gene_biotype: protein_coding
description:
  Putative secreted protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: azo3611
symbol: azo3611
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: azo3612
symbol: cafA
gene_biotype: protein_coding
description:
  Ribonuclease G (EC 3.1.4.-) (RNase G) (Cytoplasmic axial filament protein). INVOLVED IN PROCESSING OF THE 5END OF 16S RRNA. COULD BE INVOLVED IN CHROMOSOME SEGREGATION AND CELL DIVISION. IT MAY BE ONE OF THE COMPONENTS OF THE CYTOPLASMIC AXIAL FILAMENTS BUNDLES OR MERELY REGULATE THE FORMATION OF THIS STRUCTURE; Family membership.


ensembl_gene_id: azo3613
symbol: menA
gene_biotype: protein_coding
description:
  Probable 14-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.-) (DHNA-octaprenyltransferase). CONVERSION OF 1,4-DIHYDROXY-2-NAPHTHOATE (DHNA) TO DIMETHYLMENAQUINONE (DMK). ATTACHES OCTAPRENYLPYROPHOSPHATE A MEMBRANE-BOUND 40-CARBON SIDE CHAIN TO DHNA. THE CONVERSION OF DHNA TO DMK PROCEEDS IN THREE STAGES: THE REMOVAL OF THE CARBOXYL GROUP OF DHNA AS CO2 THE ATTACHMENT OF THE ISOPRENOID SIDE CHAIN AND A QUINOL-TO-QUINONE OXIDATION WHICH IS THOUGHT TO BE SPONTANEOUS (BY SIMILARITY). TIGRFAM: menA: 14-dihydroxy-2-naphthoate octaprenyltransferase; Specificity unclear.


ensembl_gene_id: azo3614
symbol: azo3614
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to PA0359 of Pseudomonas aeruginosa of 35% (trembl|Q9I6D5(SRS)). No domains predicted. signal peptide. 1 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3615
symbol: ompR3
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Transcriptional regulatory protein, Trans_reg_C. IPR001789 Response_reg. Pfam: PF00486; trans_reg_C. PF00072 response_reg. SMART: SM00448 REC; Specificity unclear.


ensembl_gene_id: azo3616
symbol: envZ3
gene_biotype: protein_coding
description:
  Putative sensor histidine kinase, ATPbind_ATPase. IPR004358; Bact_sens_pr_C. IPR005467; His_kinase. IPR003661; His_kinA_N. IPR009082; His_kin_homodim. IPR003660; HAMP. Pfam: PF02518; HATPase_c. PF00512; HisKA. PF00672; HAMP. SMART: SM00387; HATPase_c. SM00388; HisKA. SM00304; HAMP. TMHMM reporting 2 transmembrane helices; Specificity unclear.


ensembl_gene_id: azo3617
symbol: azo3617
gene_biotype: protein_coding
description:
  Putative calcium binding protein,40% similarity to TrEMBL;O22845. Has 3 EFh|EF-hand, calcium binding motif;(SMART|SM00054):Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both side by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X [...]


ensembl_gene_id: azo3618
symbol: gcvA
gene_biotype: protein_coding
description:
  Glycine cleavage system transcriptional activator (Gcv operon activator). Regulatory protein for the glycine cleavage system operon (gcv). Mediates activation og gcv by glycine and repression by purines. GcvA is negatively autoregulated. Bind to three sites upstream of the gcv promoter. Similar to SWISSPROT: sprot|GCVA_ECOLI (39% Escherichia coli, glycine cleavage system transcriptional activator (gcv operon activator)) InterPro: IPR000847 HTH_LysR. IPR009058 Winged helix DNA-binding. Pfam: PF00126 Bacterial regulatory helix-turn-helix protein,lysR family. HTH reporting nucleic acid bi [...]


ensembl_gene_id: azo3621
symbol: tag
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I constitutive) (TAG I). HYDROLYSIS OF THE DEOXYRIBOSE N-GLYCOSIDIC BOND TO EXCISE 3-METHYLADENINE FROM THE DAMAGED DNA POLYMER FORMED BY ALKYLATION LESIONS. InterPro: DNA-3-methyladenine glycosylase I; High confidence in function and specificity.


ensembl_gene_id: azo3623
symbol: adhC
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase class III (Formaldehyde dehydrogenase (glutathione)). Homology to fdh of E. coli of 72% (trembl|Q59399) CLASS-III ADH IS REMARKABLY INEFFECTIVE IN OXIDIZING ETHANOL BUT IT READILY CATALYZES THE OXIDATION OF LONG-CHAIN PRIMARY ALOCHOLS AND THE OXIDATION OF S-(HYDROXYMETHYL) GLUTATHIONE (BY SIMILARITY). InterPro: Zinc-containing alcohol dehydrogenase superfamily (IPR002085) Zinc-containing alcohol dehydrogenase (IPR002328) Pfam: zinc-binding dehydrogenase Tigrfam: tdh: L-threonine 3-dehydrogenase. no signal peptide. 2 TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3625
symbol: azo3625
gene_biotype: protein_coding
description:
  Hypothetical membrane protein. no homology to the data bank no doamains predicted no signal peptide 1 TMH.


ensembl_gene_id: azo3626
symbol: azo3626
gene_biotype: protein_coding
description:
  Conserved hypothetical chaperon protein: Homology to cv2395 of C. violaceum of 62% (trembl|Q7NVE8). InterPro: Heat shock protein hsp70 (IPR001023). Pfam: Hsp70 protein. no signal peptide. no TMHs; Family membership.


ensembl_gene_id: azo3627
symbol: azo3627
gene_biotype: protein_coding
description:
  Conserved hypothetical SLT domain protein. Homology to NE2226 of N.europaea of 42% (trembl|Q82SS9(SRS). Pfam: Transglycosylase SLT domain. Bacterial lytic transglycosylases degrade murein via cleavage of the beta-1,4- glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine, with the concomitant formation of a 1,6-anhydrobond in the muramic acid residue. Escherichia coli has at least three different lytic transglycosylases: two soluble isozymes of 65 Kd and 35 Kd and a membrane-bound enzyme of 38 Kd. The sequence of the 65 Kd enzyme (gene slt) has been determined. A domain  [...]


ensembl_gene_id: azo3630
symbol: ydeA
gene_biotype: protein_coding
description:
  Sugar efflux transporter protein, involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites. Transports L-arabinose and to a lesser extent IPTG. Seems to contribute to the control of the arabinose regulon. 26% MFS.IPR005828; Sub_transporter. Belongs to major facilitator superfamily. SotB (TC 2.A.1.2) family. Signal peptide:present. TMHelix:12; Specificity unclear.


ensembl_gene_id: azo3631
symbol: yafB
gene_biotype: protein_coding
description:
  25-diketo-D-gluconic acid reductase B (EC 1.1.1.274) (25-DKG reductase B) (25-DKGR B) (25DKGR-B) (AKR5D). TREMBL:Q8Y090: 67% identity, 78% similarity. Catalyzes the reduction of 25-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG) (By similarity). subunit:monomer (by similarity). subcellular location:cytoplasmic (by similarity). 2-keto-l-gulonic acid is a key intermediate in the production of l-ascorbic acid (vitamin c). belongs to the aldo/keto reductase family InterPro:IPR001395; Aldo/ket_red. Pfam:PF00248; aldo_ket_red; 1. PRINTS PR00069; ALDKETRDTAS ribH: riboflavin sy [...]


ensembl_gene_id: azo3632
symbol: azo3632
gene_biotype: protein_coding
description:
  ATP-binding cassette (ABC) transporters form a large family of proteins responsible for translocation of a variety of compounds across biological membranes. They are composed of two transmembrane domains responsible for binding and transport and two nucleotide-binding domains responsible for coupling the energy of ATP hydrolysis to conformational changes in the TMDs. Similar to TREMBL:Q89UA9 (44% identity); TREMBL:Q92M72 (44% identity); SWISSPROT:Q9JI39 (32% identity). InterPro (IPR003439): ABC transporter. InterPro (IPR003593): AAA ATPase. InterPro (IPR001687): ATP/GTP-binding site mo [...]


ensembl_gene_id: azo3633
symbol: azo3633
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. No significant homology over the entier protein. signal peptide no TMHs.


ensembl_gene_id: azo3634
symbol: azo3634
gene_biotype: protein_coding
description:
  Probable D-(-)-3-hydroxybutyrate oligomer hydrolase; Participates in the degradation of poly-3-hydroxybutyrate (PHB). It works downstream of poly(3-hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB- oligomers) into 3HB-monomers; Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family.


ensembl_gene_id: azo3635
symbol: azo3635
gene_biotype: protein_coding
description:
  Conserved hypothetical acetyltransferase. Homology to cv2337 of C. violaceum of 43% (AAQ60009). InterPro: GCN5-related N-acetyltransferase (IPR000182). Pfam: Acetyltransferase (GNAT) family. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3636
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: azo3637
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase / diamine N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexap [...]


ensembl_gene_id: azo3638
symbol: pta
gene_biotype: protein_coding
description:
  Conserved hypothetical phosphate acetyltransferase. Homology to pta of R. palustris of 63% (tremblnew|CAE30007). InterPro: Phosphate acetyl/butaryl transferase (IPR002505); MaoC-like dehydrogenase domain (IPR002539). Pfam: MaoC like domain; Phosphate acetyl/butaryl transferase. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3639
symbol: ackA
gene_biotype: protein_coding
description:
  Probable acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: azo3640
symbol: azo3640
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. TREMBL:Q9A2S0: 40% identity InterPro:IPR002781; DUF81. Pfam:PF01925; DUF81. Non secretory protein (signal peptide probablity:0.035) and presence of 7 transmembrane helices (TMHMM predicted); Conserved hypothetical protein.


ensembl_gene_id: azo3641
symbol: gltD
gene_biotype: protein_coding
description:
  Glutamate synthase (small chain) oxidoreductase; Glutamate synthase [NADPH] precursor (EC 1.4.1.13) (NADPH-GOGAT)small chain. TREMBL:Q8XV67-77% identity, 87% similarity InterPro:IPR006005- One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (EC: 1.4.1.13) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+ gid: gid protein Pfam:FAD binding domain,Thi family, 4Fe-4S binding domain,KTN-NAD binding domain, DUF127; High confidence  [...]


ensembl_gene_id: azo3643
symbol: azo3643
gene_biotype: protein_coding
description:
  Probable dNTP triphosphohydrolase. Homology to an orf of Thermus thermophilus of 46% (gi|37572416|dbj|BAC98488.1|(NCBI ENTREZ)). Pfam: HDc. The HD domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity. These enzymes appear to be involved in the nucleic acid metabolism, signal transduction and possibly other functions in bacteria, archaea and eukaryotes. The fact that all the highly conserved redisues in the HD superfamily are histidines or aspartates suggests that coordination of divalent cations is essential for the activity of these proteins. [...]


ensembl_gene_id: azo3644
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.


ensembl_gene_id: azo3645
symbol: aroK
gene_biotype: protein_coding
description:
  Probable shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: azo3646
symbol: pilQ
gene_biotype: protein_coding
description:
  Type 4 fimbrial biogenesis protein PilQ, similarity to sprot|PILQ_PSEAE (41%) and trembl|Q8XV60 (45%). PilQ is essential for the biogenesis of type IV pili. Its precise function is unknown, but it has been suggested that it may act as a pilus channel in the final stages of pilus assembly. InterPro (PF00263): General (type II) secretion pathway (GSP) D protein SignalP reporting signal peptide; Specificity unclear.


ensembl_gene_id: azo3647
symbol: pilP
gene_biotype: protein_coding
description:
  Type 4 fimbrial biogenesis protein, PilP. PilP is essential for the biogenesis of type IV pili. Similar to trembl|Q7NZU1(37%). SignalP reporting Signal Peptide; Family membership.


ensembl_gene_id: azo3648
symbol: pilO
gene_biotype: protein_coding
description:
  Type 4 fimbrial biogenesis protein PilO, similarity to pir|S77728 (40%). PilO proteins are involved in the assembly of pilin. TMHMM reporting one TMH; Specificity unclear.


ensembl_gene_id: azo3649
symbol: pilN
gene_biotype: protein_coding
description:
  Type 4 fimbrial biogenesis protein PilN, similarity to trembl|Q82SK2(51%)and to pir|S77727(42%). In P. aeruginosa PilN was found to be required for fimbrial biogenesis by complementation studies using twitching motility and sensitivity to fimbrial-specific phage as indicators of the presence of functional fimbriae. SignalP reporting signal peptide; Specificity unclear.


ensembl_gene_id: azo3650
symbol: pilM
gene_biotype: protein_coding
description:
  Type 4 fimbrial biogenesis protein PilM, similarity to trembl|Q82SK1 (56%)and to pir|S77726 (47%). Four genes,pilM-P, encode the necessary proteins and pilM is required for the assembly of the type IV fimbriae in Pseudomonas aeruginosa; Specificity unclear.


ensembl_gene_id: azo3651
symbol: mrcA
gene_biotype: protein_coding
description:
  Probable penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin- insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]. Homology to mrcA of N. meningitides of 47% (sprot|PBPA_NEIMA(SRS)) Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (By sim [...]


ensembl_gene_id: azo3652
symbol: cyaY
gene_biotype: protein_coding
description:
  Putative CyaY protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: azo3653
symbol: azo3653
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to ypo3846 of Y. pestis of 42% (trembl|Q8ZAF7). no domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3654
symbol: lysA2
gene_biotype: protein_coding
description:
  LysA2 protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: azo3655
symbol: azo3655
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to ebA2272 of Azoarcus sp. EbN1 of 62% (gnl|keqq|eba:ebA2272(KEGG)). No domains predicted. No TMHs. No signal peptide.


ensembl_gene_id: azo3656
symbol: dacB
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Penicillin-binding protein 4 precursor (PBP-4) [Includes: D-alanyl-D- alanine carboxypeptidase (EC 3.4.16.4) (DD-peptidase) (DD- carboxypeptidase); D-alanyl-D-alanine-endopeptidase (DD-endopeptidase)]. Not involved in transpeptidation but exclusively catalyzes a DD-carboxypeptidase and DD-endopeptidase reaction. PBP4: D-alanyl-D-alanine carboxypeptid; High confidence in function and specificity.


ensembl_gene_id: azo3657
symbol: azo3657
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to bb4211 of B. bronchiseptica of 37% (trembl|Q7WFQ9(SRS)). No domains predicted. No signal peptide. 3 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3658
symbol: yigC
gene_biotype: protein_coding
description:
  3-polyprenyl-4-hydroxybenzoate decarboxylase and related dec; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: azo3659
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase (Orotidylic decarboxylase) (OMP decarboxylase) (OMPdcase) (Uridine 5'-monophosphate synthase) (UMP synthase); High confidence in function and specificity; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: azo3660
symbol: npd2
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase 2 (EC 3.5.1.-) (Regulatory protein SIR2 homolog 2). Modulates the activities of several enzymes which are inactive in their acetylated form. Similar to SWISSPROT: sprot|NPD2_PSEAE (50% Pseudomonas aeruginosa, Npd2) / sprot|NPD1_ARCFU (33% Archaeoglobus fulgidus, NpdA) InterPro: IPR003000 SIR2. Pfam: PF02146 Sir2 family; High confidence in function and specificity.


ensembl_gene_id: azo3661
symbol: azo3661
gene_biotype: protein_coding
description:
  Conserved hypothetical molybdopterin oxidoreductase. Homology to rsc2859 of R. solanacearum of 60% (trembl|Q8XVH2). Tigrfam: bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxidoreductases. Pfam: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain. Helixturnhelix motif. no signal sequenz. no TMHs; Conserved hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: azo3662
symbol: azo3662
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted proteinn. Homology to ebA3326 Azoarcus sp. EbN1 of 47% (gnl|keqq|eba:ebA3326(KEGG)). no domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3663
symbol: pyrE
gene_biotype: protein_coding
description:
  Official Name Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: azo3664
symbol: xthA2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease (EC 3.1.11.2). InterPro: AP endonucleases family 1; High confidence in function and specificity.


ensembl_gene_id: azo3665
symbol: azo3665
gene_biotype: protein_coding
description:
  Conserved hypothetical signaling protein. Homology to IL2267 of Idiomarina loihiensis of 35% (gnl|keqq|ilo:IL2267(KEGG)). InterPro: IPR001633 EAL. IPR000160 GGDEF. Pfam: PF00563 EAL. PF00990 GGDEF. SMART: SM00267 DUF1. SM00052 DUF2. TIGRFAM:TIGR00254 GGDEF. Signaling protein ykoW. Probable signaling protein whose physiological role is not yet known. no signal peptide. No TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3666
symbol: azo3666
gene_biotype: protein_coding
description:
  Putative sensor histidine kinase, low similarity to SWISSPROT: sprot|KINB_PSEAE (13% Pseudomonas aeruginosa,alginate biosynthesis sensor protein KinB) / TREMBL: trembl|Q50853 (13% Myxococcus xanthus, AsgA) InterPro: IPR004358 Bact_sens_pr_C. IPR003661 His_kinA_N. IPR005467 His_kinase. Pfam: PF02518 HATPase_c. PF00512 HisKA. SMART: SM00387 HATPase_c. SM00388 HisKA. TMHMM reporting 1 transmembrane helices; Family membership.


ensembl_gene_id: azo3667
symbol: azo3667
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to RS05100 of Ralstonia solanacearum of 50% (trembl|Q8Y1D7(SRS)). Has PF05957, Bacterial protein of unknown function (DUF883);IPR010279; This family consists of several hypothetical bacterial proteins of unknown function. no signal peptide. 1 TMH; Conserved hypothetical protein.


ensembl_gene_id: azo3668
symbol: azo3668
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to rs05101 R. solanacearum of 36% (trembl|Q8Y1D8(SRS)). No domains predicted. No signal peptide. 2 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3669
symbol: azo3669
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to ebD74 of Azoarcus sp. EbN1 of 36% (gnl|keqq|eba:ebD74(KEGG)). No domains predicted. No signal peptide. No TMHs.


ensembl_gene_id: azo3670
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase (Hypoxanthine-guanine phosphoribosyltransferase. (HGPRTase) (IMP pyrophosphorylase) (IMP diphosphorylase) (Transphosphoribosidase) (Guanine phosphoribosyltransferase); Function unclear.


ensembl_gene_id: azo3671
symbol: azo3671
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to BPP4351 of B.parapertussis of 38% (trembl:Q7W2Q3). No domains predicted. No TMHs. No signal peptide.


ensembl_gene_id: azo3674
symbol: mucD4
gene_biotype: protein_coding
description:
  Probable serine protease MucD. Homology to mucD of P. aeruginosa of 51% (trembl|Q57155) Pfam: Trypsin; PDZ domain (Aslo konwn as DHR or GLGF) no TMH signal peptide; High confidence in function and specificity; Belongs to the peptidase S1C family.


ensembl_gene_id: azo3675
symbol: azo3675
gene_biotype: protein_coding
description:
  Hypothetical protein predicted by Glimmer/Critica. Homology to bpp3105 of B. parapertussis of 20% (trembl|Q7W622). no domains predicted. no signal peptide. no TMHs.


ensembl_gene_id: azo3676
symbol: nagL2
gene_biotype: protein_coding
description:
  Probable maleylpyruvate isomerase. Homology to nagL of Ralstonia spU of 50% (trembl|O86043) NagL is a reduced glutathione-dependent maleylpyruvate isomerase catalyzing the isomerization of maleypyruvate to fumarylpyruvate. InterPro: Glutathione S-transferase N terminus (IPR004045), Glutathione S-transferase C terminus (IPR004046) Pfam: Glutathione S-transferase, N-terminal domaine no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3677
symbol: dctP6
gene_biotype: protein_coding
description:
  Putative c4-dicarboxylate-binding periplasmic protein; TRAP-dicarboxylate transporter. Binds c4-dicarboxylates; part of the binding-protein-dependent transport system for uptake of C4-dicarboxylates. 23% TRAP_transptDctP. Pfam:PF03480; SBP_bac_7; 1. TIGRFAMs:TIGR00787; dctP; 1. Signal peptide: present; Specificity unclear.


ensembl_gene_id: azo3678
symbol: azo3678
gene_biotype: protein_coding
description:
  This family consists of fumarylacetoacetate (FAA) hydrolase, or fumarylacetoacetate hydrolase (FAH) and it also includes HHDD isomerase/OPET decarboxylase from E. coli strain W. Similar to TREMBL:Q9KSB3 (67% identity); TREMBL:Q92LT4 (67% identity); TREMBL:Q8EGD4 (61% identity). Pfam (PF01557): Fumarylacetoacetate (FAA) hydrolase family; Family membership.


ensembl_gene_id: azo3679
symbol: azo3679
gene_biotype: protein_coding
description:
  Glyoxalase-family protein; Glyoxalase I (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. Similar to trembl|Q89SS0 (63%). Pfam (PF00903): Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.


ensembl_gene_id: azo3680
symbol: azo3680
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to RS01748 of R.solanacearum of 59% (trembl:Q8XRY0). No domains predicted. No TMHs. No signal peptide.


ensembl_gene_id: azo3681
symbol: mhpA
gene_biotype: protein_coding
description:
  Putative oxygenase. 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-), InterPro: Aromatic-ring hydroxylase (flavoprotein monooxygenase); Specificity unclear.


ensembl_gene_id: azo3682
symbol: azo3682
gene_biotype: protein_coding
description:
  Putative cyclase; Beta-lactamase II precursor (EC 3.5.2.6) (Penicillinase) (Cephalosporinase). Can hydrolyze carbapenem compounds. InterPro:IPR001279-Metallo-beta-lactamase superfamily TREMBL:Q8XRX8-72% identity TREMBL:Q7VUG6- 62% Pfam:PF00753-LactamaseB, Ribosomal proteinS6e,ThiC family TIGRFAM:TIGR00010- TatD/hisF family TMHMM predicted transmembrane helix. mobB: molybdopterin-guanine dinucleotide; High confidence in function and specificity.


ensembl_gene_id: azo3684
symbol: azo3684
gene_biotype: protein_coding
description:
  Putative periplasmic binding protein-related protein.This family includes several of which are involved in iron transport. 24%; Function unclear.


ensembl_gene_id: azo3685
symbol: azo3685
gene_biotype: protein_coding
description:
  Putative hybrid sensor and regulator protein, MmoS) InterPro: IPR003594; ATPbind_ATPase. IPR005467; His_kinase. IPR003661; His_kinA_N. IPR008207; Hpt. IPR001610; PAC. IPR000700; PAS-assoc_C. IPR000014; PAS_domain. IPR001789; Response_reg. Pfam: PF02518; HATPase_c. PF00512; HisKA. PF00785; PAC. PF00989; PAS. PF00072; Response_reg. SMART: SM00387; HATPase_c. SM00388; HisKA. SM00073; HPT. SM00086; PAC. SM00091; PAS. SM00448; REC. TIGRFAM: TIGR00229; sensory_box. TMHMM reporting 2 transmembrane helices; Family membership.


ensembl_gene_id: azo3686
symbol: rpfG
gene_biotype: protein_coding
description:
  Probable response regulator, HD. IPR003607; Met_phsphohydro. IPR001789; Response_reg. IPR008328; Res_reg_HDGYP. Pfam: PF01966; HD. PF00072; Response_reg. SMART: SM00471; HDc. SM00448; REC; Specificity unclear.


ensembl_gene_id: azo3687
symbol: cc43
gene_biotype: protein_coding
description:
  Putative cytochrome c4. Homology to cc4 of A. vinelandii of 29% (sprot|CYC4_AZOVI). Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems. Pfam: cytochrome C signal peptide no TMHs.


ensembl_gene_id: azo3688
symbol: azo3688
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to pspto0091 of P. syringae of 35% (trembl|Q88BC6). Pfam: DUF861. This family consists of several proteins which seem to be specific to plants and bacteria. The function of this family is unknown. no signal peptide. no TMHs.


ensembl_gene_id: azo3690
symbol: azo3690
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to atu1643 of A. tymefaciens of 39% (trembl|Q8UEW1(SRS)). Pfam: Bacterial transmembrane pair family. This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins. signal peptide. 3 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3691
symbol: azo3691
gene_biotype: protein_coding
description:
  Putative methyl-accepting chemotaxis protein,Chmtaxis_transd. IPR003660; HAMP. Pfam: PF00672; HAMP. PF00015; MCPsignal. SMART: SM00304; HAMP. SM00283; MA. Signal P reporting signal peptide. TMHMM reporting 2 transmembrane helices; Family membership.


ensembl_gene_id: azo3692
symbol: azo3692
gene_biotype: protein_coding
description:
  Putative N-acetyltransferase,51% Identity to TrEMBl;Q7WQB1,54% Identity to TrEMBL;Q63LT2,Q7WCA7. Has PF00583, Acetyltransferase (GNAT) family;IPR000182,GCN5acetyl_trans; This family contains proteins with N-acetyltransferase functions. Histone acetylation is carried out by a class of enzymes known as histone acetyltransferases (HATs), which catalyze the transfer of an acetyl group from acetyl-CoA to the lysine E -amino groups on the N-terminal tails of histones. Early indication that HATs were involved in transcription came from the observation that in actively transcribed regions of c [...]


ensembl_gene_id: azo3693
symbol: azo3693
gene_biotype: protein_coding
description:
  Similar to hypothetical integral membrane transport protein yidY (MFS family). Signal peptide containing non secretory protein. With 12 putative transmembrane helices. General transport of carbohydrates, amino acids, and other small molecules; Conserved hypothetical protein.


ensembl_gene_id: azo3695
symbol: trpS
gene_biotype: protein_coding
description:
  TrpS protein; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: azo3696
symbol: azo3696
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to bb3068 of B. bronchiseptica of 31% (trembl|Q7WHY8(SRS)). no domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3697
symbol: azo3697
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. No homology to the data bank. No domains predicted. No TMHs. Has signal peptide.


ensembl_gene_id: azo3698
symbol: azo3698
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to Daro03001371 of Dechloromonas aromatica of 43% (gi|53730748|ref|ZP_00348943.1|(NBCI ENTREZ)). No doamins predicted. No signal peptide. No TMHs.


ensembl_gene_id: azo3699
symbol: azo3699
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, 38% identity(51% similarity) to TrEMBL;Q8KAU5. TrEMBL; Q6MRD6(59% identity). Has PF07075, Protein of unknown function (DUF1343);IPR008302, UCP016719; This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function; Function unclear.


ensembl_gene_id: azo3700
symbol: trxC2
gene_biotype: protein_coding
description:
  Probable thioredoxin-disulfide reductase. Homology to trxC3 (THI3_CORNE) of C. nephridii of 43%. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. Pfam: Thioredoxin no signal peptide no TMHs; Family membership.


ensembl_gene_id: azo3701
symbol: azo3701
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to bll7423 of B. japonicum of 53% (trembl|Q89DL6). Pfam: Antibiotic biosynthesis monooxygenase. no TMHs. No signal peptide.


ensembl_gene_id: azo3702
symbol: azo3702
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to Avin02001428 of Azotobacter vinelandii of 54% (gi|53612536|ref|ZP_00091632.2|(NBCI ENTREZ)). no domains predicted. no signal peptide. no TMHs.


ensembl_gene_id: azo3703
symbol: azo3703
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to PM2013 of P. multocida of 44% (tremble:Q9CJJ4). probable signal peptide. probable 2 TMHS; Conserved hypothetical protein.


ensembl_gene_id: azo3704
symbol: azo3704
gene_biotype: protein_coding
description:
  Hypothetical membrane protein. No homology of the entire protein to the data bank. Has PF05875;Alkaline phytoceramidase (aPHC):This family consists of several eukaryotic Alkaline phytoceramidase (aPHC) sequences. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates. Alkaline phytoceramidase (aPHC) is responsible for the hydrolysis of phytoceramide. No signal peptide. 6 TMHs.


ensembl_gene_id: azo3706
symbol: azo3706
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to TREMBL:Q89RW7 (50% identity,64% similarity); TREMBL:Q88IS2 (49% identity). InterPro (IPR000051); SAM (and some other nucleotide) binding motif.


ensembl_gene_id: azo3707
symbol: azo3707
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to sty1393 of S. typhi of 34% (trembl|Q8Z792). Pfam: Antibiotic biosynthesis monooxygenase. no signal peptide. no TMHs.


ensembl_gene_id: azo3708
symbol: azo3708
gene_biotype: protein_coding
description:
  Dioxygenase-family protein; Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates. Cleavage of aromatic rings is one of the most important function of dioxygenases. Similar to trembl|Q7WJ14 (50%). Pfam (PF00903): Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.


ensembl_gene_id: azo3710
symbol: azo3710
gene_biotype: protein_coding
description:
  Conserved hypothetical transferase. Homology to the IAA acetyltransferase of A. brasilense of 37% (sprot|IAAT_AZOBR). The IAA acetyltransferase participates in the tryptophan-dependent indole-3-acetic acid production, which is a phytohormone released by A.brasilense. Interpro: GCN5-related N-acetyltransferase (IPR000182). Pfam: Acetyltransferase (GNAT) family. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3711
symbol: azo3711
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to SWISSPROT:P39367 (68% identity),TREMBL:Q8Z1C8 (66% identity).


ensembl_gene_id: azo3712
symbol: azo3712
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to Raeut03002407 of Ralstonia eutropha of 48% (gi|46132577|ref|ZP_00171131.2|(NBCI ENTREZ)). Pfam: NUDIX domain. No signal peptide. No TMHs.


ensembl_gene_id: azo3713
symbol: bleO
gene_biotype: protein_coding
description:
  Putative bleomycin resistance protein; Bleomycin (Blm) is a glycopeptide antibiotic produced naturally by actinomycetes. It is a strong DNA-cutting agent and thus finds use as a potent anti-cancer drug. Actinomycetes have developed a defence mechanism against this lethal compound, producing a protein that confers resistance to Blm through drug sequestering.Putative Bleomycin resistance protein,; Family membership.


ensembl_gene_id: azo3714
symbol: azo3714
gene_biotype: protein_coding
description:
  Probable Acetyltransferase protein. Has weak homology with hits in the database, TrEMBL;Q7N1H0(56% Identity). Has PF00583, Acetyltransferase (GNAT) family; IPR000182, GCN5acetyl_trans; This family contains proteins with N-acetyltransferase functions;Histone acetylation is carried out by a class of enzymes known as histone acetyltransferases (HATs), which catalyze the transfer of an acetyl group from acetyl-CoA to the lysine E -amino groups on the N-terminal tails of histones. Early indication that HATs were involved in transcription came from the observation that in actively transcribe [...]


ensembl_gene_id: azo3715
symbol: azo3715
gene_biotype: protein_coding
description:
  Hypothetical membrane protein. Homology to an orf of E. coli of 29% (trembl|Q8VNQ4). no domains predricted. no signal peptide. 3 TMHs.


ensembl_gene_id: azo3717
symbol: azo3717
gene_biotype: protein_coding
description:
  Hypothetical protein; Region start changed from 4071796 to 4071769 (-27 bases), Changed start from att to next atg.


ensembl_gene_id: azo3720
symbol: azo3720
gene_biotype: protein_coding
description:
  Putative truncated transposase for insertion sequence element IS1328. Required for the transposition of the insertion element (Potential). Homology only to the N-terminus; Family membership.


ensembl_gene_id: azo3721
symbol: azo3721
gene_biotype: protein_coding
description:
  Putative truncated transposase for insertion sequence element IS1328. Required for the transposition of the insertion element (Potential). InterPro: Transposase IS116/IS110/IS902 family. Homoloy only to the C-terminus; Specificity unclear.


ensembl_gene_id: azo3722
symbol: azo3722
gene_biotype: protein_coding
description:
  Hypothetical protein, Has very weak or no homologs in the Database. Has No domains, repeats, motifs or features predicted above threshold score.


ensembl_gene_id: azo3724
symbol: azo3724
gene_biotype: protein_coding
description:
  Truncated integrase/recombinase, probably Integrase/recombinase protein. 58% Identity to SProt;P62591,P62592. Has PF00589, Phage integrase family; IPR002104, Phage_integrase; Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase (P06956) are Arg-173, His-289, Arg-292 and Tyr-324. Homology only to the N-terminus.


ensembl_gene_id: azo3725
symbol: azo3725
gene_biotype: protein_coding
description:
  Putative truncated integrase/recombinase (E2 protein). PUTATIVE INTEGRASE BELIEVED TO BE INVOLVED IN INSERTIONS OF ANTIBIOTIC RESISTANCE GENES INTO PLASMIDS AND TRANSPOSONS. Homology only to the C-terminus; Family membership.


ensembl_gene_id: azo3726
symbol: metH
gene_biotype: protein_coding
description:
  Probable methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: azo3727
symbol: azo3727
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to ebA3180 of Azoarcus sp. EbN1 of 57% (gi|56477224|ref|YP_158813.1|(NBCI ENTREZ)). No domains predicted Signal Peptide present. No TMH reported present; Conserved hypothetical protein.


ensembl_gene_id: azo3728
symbol: azo3728
gene_biotype: protein_coding
description:
  Probable lipoprotein, 58% similarity to TrEMBL:Q8XWT8 PROBABLE LIPOPROTEIN [RS01163] [Ralstonia solanacearum (Pseudomonas solanacearum)]. Has PF04355:IPR007450:SmpA / OmlA family;Lipoprotein Bacterial outer membrane lipoprotein, possibly involved in in maintaining the structural integrity of the cell envelope [1]. Lipid attachment site is a conserved N terminal cysteine residue. Sometimes found adjacent to the OmpA domain (OmpA). Signal peptide present. NO TMH reported present; Family membership.


ensembl_gene_id: azo3729
symbol: livK3
gene_biotype: protein_coding
description:
  Probable leucine-specific binding protein; In enteric bacteria such as E. coli and Salmonella typhimurium, periplasmic binding proteins are found to participate in the transport of amino acids, sugars and ions. Leucine-specific binding protein are coded by livK and livJ. Similar to sprot|LIVK_ECOLI (31%) and to trembl|Q7NV64 (54%). Pfam (PF01094): Receptor family ligand binding region Pfam (PF00861): Ribosomal L18p/L5e family SignalP reporting Signal peptide; Specificity unclear.


ensembl_gene_id: azo3730
symbol: livK4
gene_biotype: protein_coding
description:
  Probable leucine-specific binding protein; In enteric bacteria such as E. coli and Salmonella typhimurium, periplasmic binding proteins are found to participate in the transport of amino acids, sugars and ions. Leucine-specific binding protein are coded by livK and livJ. Similar to trembl|Q7NV64 (58%) and to sprot|LIVK_ECOLI (33%). Pfam (PF01094): Receptor family ligand binding region SignalP reporting Signal peptide; Specificity unclear.


ensembl_gene_id: azo3731
symbol: livH
gene_biotype: protein_coding
description:
  ABC transporter permease protein; Branched-chain amino acid transport system typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system.The integral inner-membrane proteins translocate the substrate across the membrane. Similar trembl|Q7NXX3 (60%), to sprot|BRAD_PSEAE (47%) and to sprot|LIVH_ECOLI (44%). Pfam (PF02653): Branched-chain amino acid transport system / permease component TMHMM reporting seven Tmheli [...]


ensembl_gene_id: azo3732
symbol: livM5
gene_biotype: protein_coding
description:
  Putative branched-chain amino acid transport permease. Homology to livM of S. typhimurium of 44%. Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane. no signal peptide probable 8 TMHs; Specificity unclear.


ensembl_gene_id: azo3733
symbol: livG2
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Probable high-affinity branched-chain amino acid transport ATP-binding protein BraF. ATP-binding cassette (ABC) transporters are multidomain membrane proteins,responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains. BraF is a COMPONENT OF THE HIGH AFFINITY LEUCINE ISOLEUCINE VALINE TRANSPORT SYSTEM (LIV-I) WHICH IS OPERATIVE WITHOUT NA(+) AND IS SPECIFIC FOR ALANINE AND THREONINE IN AD [...]


ensembl_gene_id: azo3734
symbol: azo3734
gene_biotype: protein_coding
description:
  ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains. Similar to trembl|Q7NXX0 (58%) and to trembl|Q7VVD3 (59%). Smart: AAA ATPases; Specificity unclear.


ensembl_gene_id: azo3735
symbol: bcr2
gene_biotype: protein_coding
description:
  Bicyclomycin resistance protein homolog. Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase (By similarity). InterPro: General carbohydrate, amino acid, and divalent cation transport. Occurence of signal peptide and 12 transmembrane helices. Presence of DUF domains and Cation transport ATPase C-terminus domains. 35% identity and 47% similarity to bcr from X.axonopodis. Probably it is a copy of bcr1 in Azoarcus BH72 genome; Conserved hypothetical protein.


ensembl_gene_id: azo3736
symbol: azo3736
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to rsc0338 of R. solanacearum of 64% (trembl|Q8Y2J7). Probable Mg(2+) chelatase family protein. InterPro: Mg chelatase-related protein (IPR004482); MCM family (IPR001208); AAA ATPase superfamily (IPR003593); Magnesium chalatase, chlI subunit (IPR000523); TypeI antifreeze protein (IPR000104). no signal peptide. no TMHs. TIGR00368: Mg chelatase-related protein; Family membership.


ensembl_gene_id: azo3737
symbol: azo3737
gene_biotype: protein_coding
description:
  Putative secreted protein; Conserved hypothetical protein. Homology to NE0192 of N.europaea of 52% (trembl:Q82XR2). Has PF04380, Protein of unknown function (DUF526);IPR007475; This is a family of uncharacterised proteins. No signal peptide. No TMHs.


ensembl_gene_id: azo3738
symbol: azo3738
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to rsc0341 of R. solanacearum of 40% (trembl|Q8Y2J4(SRS)). no domains predicted. signal peptide. no TMHs.


ensembl_gene_id: azo3739
symbol: glnK
gene_biotype: protein_coding
description:
  PII-like signal transmitter proteins are involved in the regulation of ammonium assimilation and nitrogen fixation. The PII-like proteins differed from each other in details of N-sensing. They were covalently modified by uridylylation upon nitrogen limitation. Similar to trembl|Q9EZQ3 (100%) and to trembl|Q7NQY3 (87%). Pfam: Nitrogen regulatory protein P-II; High confidence in function and specificity.


ensembl_gene_id: azo3740
symbol: amtB
gene_biotype: protein_coding
description:
  Ammonium transporter 1 member 1 (AtAMT1;1). Involved in high affinity ammonium uptake. TREMBL:Q8RP89: 100% identity (published) InterPro:IPR001905; Ammonium_transpt. IPR002229; RhesusRHD. IPR010256; RH_like_transpt. Pfam: PF00909; Ammonium_transp PRINTS PR00342; RHESUSRHD. TIGRFAMs TIGR00836; amt; PROSITE: PS01219; AMMONIUM_TRANSP SignalP predicted signal peptide present (0.997 probability). TMHMM predicted 12 transmembrane helices; High confidence in function and specificity.


ensembl_gene_id: azo3741
symbol: ompW
gene_biotype: protein_coding
description:
  Outer membrane protein W precursor. Acts as a receptor for colicin S4; High confidence in function and specificity.


ensembl_gene_id: azo3742
symbol: purU
gene_biotype: protein_coding
description:
  Official Name Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: azo3743
symbol: thrH
gene_biotype: protein_coding
description:
  Probable homoserine kinase; ThrH encodes a protein with an in vivo homoserine-kinase-like activity in P. aeruginosa. Homoserine kinase,the product of the thrB gene, catalyzes an obligatory step of threonine biosynthesis. Similar trembl|Q9I2Y2 (62%). Pfam (PF00702): haloacid dehalogenase-like hydrolase; Function unclear.


ensembl_gene_id: azo3745
symbol: yheS
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein yheS. Nonsecretory protein with Signal peptide. Presence of oxidoreductase Molybdopterin binding domain, M-protein repeats, RecF protein domains, Cu amine oxidase N3 domain,K+ channels and iron-sulphur binding potentials.57% identity and 68% similarity to Dechloromonas ATPase component of ABC transporter ureG: urease accessory protein UreG; Family membership.


ensembl_gene_id: azo3746
symbol: azo3746
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. No homology to the data bank. No domains predicted. signal peptide no TMHs.


ensembl_gene_id: azo3747
symbol: azo3747
gene_biotype: protein_coding
description:
  2-hydroxychromene-2-carboxylate isomerase family protein; Catalyzes the isomerization of 2-hydroxychromene-2-carboxylate (hcca) to trans-o-hydroxybenzylidenepyruvate (thbpa). Upper napthalene catabolic pathway which involves conversion of napthalene to salicylate. Similar to TREMBL:Q7WEK4 (57% identity); TREMBL:Q9I714 (35% identity); SWISSPROT:Q51948 (29% identity). InterPro: 2-hydroxychromene-2-carboxylate isomerase Pfam (HCCA_isomerase): 2-hydroxychromene-2-carboxylate isomerase; Specificity unclear.


ensembl_gene_id: azo3749
symbol: ampR
gene_biotype: protein_coding
description:
  Probable transcriptional regulator, LysR family; Probable HTH-type transcriptional activator ampR. Regulates the expression of the beta-lactamase gene. Represses cephalosporinase (ampC) in the presence of beta-lactams and induces it in the absence of them. Similar to SWISSPROT: sprot|AMPR_PSEAE (34% Pseudomonas aeruginosa,HTH-type transcriptional activator AmpR) Pfam: PF00126 Bacterial regulatory helix-turn-helix protein, lysR family. HTH reporting nucleic acid binding motif; High confidence in function and specificity.


ensembl_gene_id: azo3750
symbol: azo3750
gene_biotype: protein_coding
description:
  This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoatesynthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate. Similar to TREMBL:Q7NWS7 (61% identity); TREMBL:Q8UIM8 (57% identity); TREMBL:Q89UX3 (33% identity). InterPro (IPR000868): Isochorismatase hydrolase. Pfam (PF00857): Isochorismatase family; Family membership.


ensembl_gene_id: azo3752
symbol: azo3752
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to RSC0519 of R. solanacearum of 51%. InterPro: Integral membrane protein DUF6. Tigrfam: 2A78: Carboxylate/Amino Acid/Amine Transporter. Pfam: Integral membrane protein DUF6. probable signal peptide. probable 9 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3753
symbol: putA
gene_biotype: protein_coding
description:
  Probable bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: azo3754
symbol: azo3754
gene_biotype: protein_coding
description:
  Putative thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: azo3755
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthetase (GSH synthetase) (GSH-S) (GSHase). InterPro: Prokaryotic glutathione synthetase ATP-binding domain; High confidence in function and specificity; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: azo3756
symbol: gshA
gene_biotype: protein_coding
description:
  GshA protein; Glutamate--cysteine ligase. Glutathione metabolism; High confidence in function and specificity.


ensembl_gene_id: azo3757
symbol: azo3757
gene_biotype: protein_coding
description:
  Modification methylase TaqI (EC 2.1.1.72) (Adenine-specific methyltransferase TaqI) (M.TaqI). THIS METHYLASE RECOGNIZES THE DOUBLE-STRANDED SEQUENCE TCGA CAUSES SPECIFIC METHYLATION ON A-4 ON BOTH STRANDS AND PROTECTS THE DNA FROM CLEAVAGE BY THE TAQI ENDONUCLEASE. InterPro: N6 adenine-specific DNA methyltransferase N12 class; Family membership.


ensembl_gene_id: azo3758
symbol: dcrH3
gene_biotype: protein_coding
description:
  Putative hemerythrin-like protein; DcrH:hemerythrin protein, is transmembrane methyl-accepting protein probably involved in bacterial chemotaxis. 32% Hemerythrin. Pfam:PF01814; Hemerythrin; 1; High confidence in function and specificity.


ensembl_gene_id: azo3759
symbol: azo3759
gene_biotype: protein_coding
description:
  Hemerythrin family protein, 38% Identity to TrEMBl:Q74G47,35% to TrEMBL; Q73NY7. Has PF01814,Hemerythrin HHE cation binding domain; IPR002063 Hemerythrin; Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor P80255 binds Cadmium so as to protect the organism from toxicity ([3]). However Hemerythrin is classically described as Oxyge [...]


ensembl_gene_id: azo3760
symbol: azo3760
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. No good homology of the entire protein to the data bank. Has PF06097,Bacterial protein of unknown function (DUF945);IPR010352; This family consists of several hypothetical bacterial proteins of unknown function. No TMHs Siganl peptide present.


ensembl_gene_id: azo3761
symbol: azo3761
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to ebD78 of Azoarcus sp. EbN1 of 40% (gnl|keqq|eba:ebD78(KEGG)). no domains predicted. no signal peptide. no TMHs.


ensembl_gene_id: azo3762
symbol: azo3762
gene_biotype: protein_coding
description:
  Hypothetical patatin-like protein. Homology to all2302 of Anabaena sp. of 20% (trembl|Q8YUN7). Pfam: Patatin. PATATIN MAY HAVE A DUAL ROLE AS A SOMATIC STORAGE PROTEIN AND AS AN ENZYME INVOLVED IN HOST RESISTANCE. THIS TUBER PROTEIN REPRESENTS APPROXIMATELY 40% OF THE TOTAL PROTEIN IN MATURE TUBERS. InterPro: Patatin (IPR002641). no signal peptide. no TMHs.


ensembl_gene_id: azo3763
symbol: azo3763
gene_biotype: protein_coding
description:
  Hypothetical protein predicted by Glimmer/Critica; Hypothetical protein. no homology to the data bank no domains no signal peptide no TMHs.


ensembl_gene_id: azo3764
symbol: azo3764
gene_biotype: protein_coding
description:
  Hypothetical 21.1 kDa protein in fasciation locus (ORF6). TREMBL:Q8FV26: 50% identity, 65% similarity InterPro:IPR005269; Cons_hypoth730. Pfam:PF03641; Lysine_decarbox L18_bact: ribosomal protein L18 Absence of signal peptide (Signal P predicted) Absence of transmembrane helices (TMHMM predicted); Specificity unclear; Belongs to the LOG family.


ensembl_gene_id: azo3765
symbol: ribA
gene_biotype: protein_coding
description:
  RibA protein; Probable GTP cyclohydrolase II. TIGRFAM: ribA: GTP cyclohydrolase II; Function unclear.


ensembl_gene_id: azo3766
symbol: azo3766
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to blr7238 of B.japonicum of 48% (trembl:Q89E49). No domains predicted. No TMHs. Signal peptide with a probability of 0.570.


ensembl_gene_id: azo3767
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: azo3770
symbol: azo3770
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, 43% identity (60% similarity) to TrEMBL; Q8ZML9. TrEMBL;Q8X937(44% identity to Escherichia coli) Has PF04972, Putative phospholipid-binding domain;IPR007055, TAD; This domain is found in a family of osmotic shock protection proteins (e.g. P27291). It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. Has SMART;SM00257,LysM, Lysin motif:IPR002482; This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation. This domain [...]


ensembl_gene_id: azo3771
symbol: fcbC2
gene_biotype: protein_coding
description:
  Probable Hypothetical protein AQ_1494. TREMBL:Q7NVG8: 46% identity, 64% similarity. InterPro:IPR006684; 4HBcoA_thiostrse. IPR006683; Thioestr_supf. Pfam PF03061; 4HBT TIGRFAMs; TIGR00051; 4HBcoA_thiostrse TIGR00051: conserved hypothetical protein No signal peptide. No transmembrane helices; Function unclear.


ensembl_gene_id: azo3772
symbol: azo3772
gene_biotype: protein_coding
description:
  Hypothetical protein yhiN. TREMBL:Q7NU52: 55% identity, 66% similarity InterPro; IPR001327; FAD_pyr_redox. InterPro; IPR004792; HI0933_like. InterPro; IPR000719; Prot_kinase. InterPro; IPR001100; Pyr_redox InterPro: HI0933-like protein TIGR00275: conserved hypothetical pro Pfam PF03486; HI0933_like Non-secretory protein with no signal peptide (SignalP predicted) No transmembrane helices (TMHMM predicted); Function unclear.


ensembl_gene_id: azo3773
symbol: azo3773
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to Daro03002424 of Dechloromonas aromatica of 32% (gi|41723837|ref|ZP_00150727.1|(NBCI ENTREZ)). Pfam: OmpA family. singal peptide. no TMHs.


ensembl_gene_id: azo3774
symbol: azo3774
gene_biotype: protein_coding
description:
  Putative serine/threonine-protein kinase (EC 2.7.11.1). Pfam: Protein kinase domain; Family membership.


ensembl_gene_id: azo3775
symbol: azo3775
gene_biotype: protein_coding
description:
  Hypothetical protein; Collagenase and related proteases. Homology to ne1979 of N. europaea of 63% (trembl|Q82TC1). InterPro: Peptidase family U32 (IPR001539). Pfam: Peptidase family U32 no signal peptide no TMHs; Family membership; ORF9.


ensembl_gene_id: azo3776
symbol: azo3776
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to ebA2790 of Azoarcus sp. EbN1 of 31% (gnl|keqq|eba:ebA2790(KEGG)). No domains predicted. no signal peptide. 2 TMHS; Conserved hypothetical protein.


ensembl_gene_id: azo3778
symbol: staT
gene_biotype: protein_coding
description:
  Putative streptothricin acetyltransferase. Homology to staT of S. lavenduale (sprot|STA_STRLA). Pfam: Acetyltransferase (GNAT) family. no signal peptide no TMHs; Family membership.


ensembl_gene_id: azo3779
symbol: ybiT
gene_biotype: protein_coding
description:
  Hypothetical ABC transporter ATP-binding protein ybiT. Probably involved in the transport of Cobalt,branched chain amino acids, or multi drug resistance. Occurence of tub domains, uridine kinase domain, DUF and RecF protein like domains. Signal P present. Central region; Family membership.


ensembl_gene_id: azo3780
symbol: ptsL
gene_biotype: protein_coding
description:
  This is a component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system. The IICD domains contain the sugar binding site and the transmembrane channel; the IIA domain contains the primary phosphorylation site (the donor is phospho-HPr); IIA transfers its phosphoryl group to the IIB domain which finally transfers it to the sugar. 32% EIIA-man.IPR004720; PTSIIB_sorb. Pfam:PF03610; EIIA-man; 1.PF03830; PTSIIB_sorb; 1; Specificity unclear.


ensembl_gene_id: azo3781
symbol: ptsH
gene_biotype: protein_coding
description:
  Phosphocarrier protein HPr (Histidine-containing protein) (Protein H). This is a component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the permease (enzymes II/III). HPr is common to all PTS (By similarity). 64% HPr_HisP_S.IPR000032; HPr_protein.IPR002114; HPr_SerP_S. IPR005698; PTS_HPr. Pfam:PF00381; PTS-HPr; 1; High confidence in function and specificity.


ensembl_gene_id: azo3782
symbol: ptsI
gene_biotype: protein_coding
description:
  Putative Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: azo3783
symbol: azo3783
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to Daro03001609 of Dechloromonas aromatica of 35% (gi|53730883|ref|ZP_00151781.2|(NBCI ENTREZ)). No domains predicted. Signal peptide present. No TMH reported Present; Conserved hypothetical protein.


ensembl_gene_id: azo3784
symbol: azo3784
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. no homology of the entire protein to the data bank. no domains predicted. signal peptide. TMH in signal peptide.


ensembl_gene_id: azo3786
symbol: hupS
gene_biotype: protein_coding
description:
  Ferredoxin hydrogenase, small subunit. Homology to hoxK of A. eutrophus of 83% (sprot:MBHS_ALCEU). This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. Tigrfam: hydA: hydrogenase (NiFe) small subunit Pfam: NADH ubiquinone oxidoreductase 20kD signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3787
symbol: hupL
gene_biotype: protein_coding
description:
  Probable ferredoxin hydrogenase, large subunit. Homology to hoxG of A. eutrophus of 68% (>sprot|MBHL_ALCEU). This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. Pfam: Nickel dpendent hydrogenase no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3788
symbol: hupC
gene_biotype: protein_coding
description:
  Probable Ni/Fe-hydrogenase, B-type cytochrome subunit. Homology to hupZ of A. chroococcum of 65% (sprot|CYBH_AZOCH) Probable b-type cytochrome. InterPro: Nickel-dependent hydrogenase b-type cytochrome subunit (IPR000516) Pfam: Nickel-dependent hydrogenase b-type cytrochrome subunit no signal peptide 4 TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3789
symbol: azo3789
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to ne1110 of N. europaea of 35% (trembl|Q82VH8). InterPro: Helix-turn-helix motif (IPR0001387). Pfam: Helix-turn-helix. no signal peptide. no TMHs.


ensembl_gene_id: azo3790
symbol: azo3790
gene_biotype: protein_coding
description:
  Conserved hypothetical glutathione peroxidase. Homology to gpwA of P. wisconsinensis of 52% (SWISSPROT:GPWA_PSEWI). Glutathione peroxidase (GSHPx), an enzyme whose principal function is to protect against damage from endogenously-formed hydroxyperoxides,catalyses the reduction of hydroxyperoxides by glutathione. InterPro: Glutathione peroxidase (IPR000889),Type I antifreeze protein (IPR000104). Pfam: Glutathione peroxidase. signal peptide. no TMHs; Family membership.


ensembl_gene_id: azo3791
symbol: azo3791
gene_biotype: protein_coding
description:
  Conserved hypothetical ATPase. Homology to MCA0262 of Methylococcus capsulatus of 68% (gi|53756248|gb|AAU90539.1|(NBCI ENTREZ)). InterPro: AAA-protein (ATPases associated with various cellular activities) (IPR003959);AAA ATPase superfamily (IPR003593) Pfam: ATPase family associated with various cellular activities (domaine from 365 aa to 540 aa) no signal peptide. no TMHs; Function unclear.


ensembl_gene_id: azo3792
symbol: hupD
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein hupD, 54% identity,(63% simialrity) to SwissProt:Q03004. Aliases: hoxM(SwissProt:P40591), hyaD(E.coli). Has PF01750:Hydrogenase maturation protease;The family consists of hydrogenase maturation proteases. In E. coli HypI the hydrogenase maturation protease is involved in processing of HypE the large subunit of hydrogenases 3, by cleavage of its C-terminal. IPR000671:Peptidase_M52; TIGR00072; hydrog_prot; Signal P reporting SIgnal peptide Present. No TMH present; High confidence in function and specificity.


ensembl_gene_id: azo3793
symbol: hupF
gene_biotype: protein_coding
description:
  Putative Hydrogenase expression/formation protein hupF,43% similarity to TrEMBL; Q6PTB2. No Signal Peptide or TMH reported present. Has PF01455:HupF/HypC family(IPR001109);The large subunit of [NiFe]-hydrogenase,as well as other nickel metalloenzymes, is synthesized as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HUPF/HYPC) form a family of small proteins that are hydrogenase precursor-specific chaperones requ [...]


ensembl_gene_id: azo3794
symbol: hupG
gene_biotype: protein_coding
description:
  Hydrogenase-1 operon protein HyaE, 50% similarity to TrEMBL;Q8XGC7, 46% similarity to SwissProt;P19931. Alias: hupG Has PF07449:Hydrogenase-1 expression protein HyaE(IPR010893);This family contains bacterial hydrogenase-1 expression proteins approximately 120 residues long. This includes the E. coli protein HyaE, and the homologous proteins HoxO of R. eutropha and HupG of R. leguminosarum. Deletion of the hoxO gene in R. eutropha led to complete loss of the uptake [NiFe] hydrogenase activity, suggesting that it has a critical role in hydrogenase assembly. No signal peptide or TMH repor [...]


ensembl_gene_id: azo3795
symbol: hupH
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein hupH, 58% similarity to SwissProt:Q03007. TrEMBL;Q6PTB0,TrEMBL;P95499, SwissProt;P19932. Has PF04809(IPR006894):HupH hydrogenase expression protein, C-terminal conserved region;This family represents a C-terminal conserved region found in these bacterial proteins necessary for hydrogenase synthesis. Their precise function is unknown. No Signal peptide or TMH reported Present; High confidence in function and specificity.


ensembl_gene_id: azo3796
symbol: hupI
gene_biotype: protein_coding
description:
  Probable rubredoxin protein, 61% Identity to SProt;P30778, P31912. Has PF00301, Rubredoxin;Rubredoxin is a low molecular weight iron-containing bacterial protein involved in electron transfer,sometimes replacing ferredoxin as an electron carrier. No signal peptide. No TMHs; High confidence in function and specificity; Belongs to the rubredoxin family.


ensembl_gene_id: azo3797
symbol: hupJ
gene_biotype: protein_coding
description:
  Probable Hydrogenase expression/formation protein hupJ, 52% similarity to SwissProtP28152. Alias:hybE No Signal Peptide or TMH reported present. thiM: hydroxyethylthiazole kinase.


ensembl_gene_id: azo3798
symbol: hupK
gene_biotype: protein_coding
description:
  Putative hydrogenase expression/formation protein HupK. Homology to hupK of R. leguminosarum of 33% (gi|48731|emb|CAA37158.1|(NCBI ENTREZ). No domains predicted. No signal peptide or TMH present., ; Family membership.


ensembl_gene_id: azo3799
symbol: hypA
gene_biotype: protein_coding
description:
  Probable hydrogenase nickel inorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: azo3800
symbol: hypB
gene_biotype: protein_coding
description:
  Probable hydrogenase accessory protein HypB. Homology to hypB of E. coli of 56% (sprot|HYPB_ECOLI). IS REQUIRED FOR THE FORMATION OF HYDROGENASE ISOENZYMES. AFFECTS SOME ASPECT OF THE PROCESSING OF HYDROGENASES and NICKEL INCORPORATION scince HYPB GENE LESIONS CAN BE COMPLEMENTED BY HIGH NICKEL ION CONCENTRATION IN THE MEDIUM. Pfam: HypB/UreG nucleotide-binding domain Tigrfam: hypB: hydrogenase accessory protein Hyp no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3801
symbol: hypF
gene_biotype: protein_coding
description:
  Probable hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: azo3802
symbol: hypC
gene_biotype: protein_coding
description:
  Probable hydrogenase assembly chaperon HypC. Homology to hypC of R. leguminosarum of 61% (sprot|HYPC_RHILV). Forms a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation. Pfam: HypF/HypC family Tigrfam: hypC_hupF: hydrogenase assembly chaperone no signal peptide no TMHs; Function unclear.


ensembl_gene_id: azo3803
symbol: hypD
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein hypD. Homology to hypD of A. eutrophus of 71% (sprot|HYPD_ALCEU). HypD is involved in hydrogenase formation. InterPro: Hydrogenase formation hypA (IPR002780) Pfam: Hydrogenase formation hypA family Tigrfam: hypD: hydrogenase expression/formation no signal peptide no TMHs; High confidence in function and specificity; Belongs to the HypD family.


ensembl_gene_id: azo3804
symbol: hypE
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein hypE, 64% Identity to SProt;P31905,TrEMBL;Q6NB52(60% Identity),Q83WU6. Has PF00586, AIR synthase related protein, N-terminal domain;IPR000728 AIR_synth; This family includes Hydrogen expression/formation protein, HypE, which may be involved inthe maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP. PF02769, AIR synthase related protein, C-terminal domain;IPR010918 AIR_synth_C; This entry i [...]


ensembl_gene_id: azo3806
symbol: azo3806
gene_biotype: protein_coding
description:
  Hypothetical protein, 33% Identity to TrEMBL;Q8XRA3 Has No domains, repeats, motifs or features could be predicted above threshold.


ensembl_gene_id: azo3807
symbol: hoxB
gene_biotype: protein_coding
description:
  Ferredoxin hydrogenase, small subunit. Homology to hoxB of A. hydrogenophilus of 75% (TREMBL:P94154). Hydrogenases catalyse the reversible oxidation of molecular hydrogen and play a vital role in anaerobic metabolism. InterPro: Hydrogenase (NiFe) small subunit HydA (IPR001821); Respiroatory-chain NADH dehydrogenase 20 kD subunit (IPR006137) Tigrfam: hydA: hydrogenase (NiFe) small subunit (hydA) Pfam: NADH ubiquinone oxidoreductase no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3808
symbol: hoxC
gene_biotype: protein_coding
description:
  Probable ferredoxin hydrogenase, large subunit. Homology to hoxC of A. hydrogenophilus of 59% (trembl|P94155). InterPro: Nickel-dependent hydrogenases large subunit.


ensembl_gene_id: azo3810
symbol: hoxJ
gene_biotype: protein_coding
description:
  Putative hydrogen uptake histidine-kinase,ATPbind_ATPase. IPR004358; Bact_sens_pr_C. IPR005467; His_kinase. IPR003661; His_kinA_N. IPR009082; His_kin_homodim. IPR001610; PAC. IPR000700; PAS-assoc_C. IPR000014; PAS_domain. Pfam: PF02518; HATPase_c. PF00512; HisKA. SMART: SM00387; HATPase_c. SM00388; HisKA. SM00086; PAC. SM00091; PAS; High confidence in function and specificity.


ensembl_gene_id: azo3811
symbol: ntaB
gene_biotype: protein_coding
description:
  Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) (NTA monooxygenase component B) (NTA-MO B). HYDROXYLATION OF NITRILOTRIACETATE. TREMBL:Q7W4Q0: 46% identity, 65% similarity InterPro: Flavin reductase-like domain Interpro:IPR002563 Pfam:PF01613 No signal peptide No transmembrane helices monomer_idh: isocitrate dehydrogenase NA; High confidence in function and specificity.


ensembl_gene_id: azo3813
symbol: azo3813
gene_biotype: protein_coding
description:
  Conserved hypothetical ATP-dependent protease La. Homology to rsc0402 of R. solanacearum of 44% (trembl|Q8Y2D4). N-terminal domain of the ATP-dependent protease La (LON), present also in other bacterial ORFs. InterPro: ATP-dependent protease La (LON) domain (IPR003111). Pfam: ATP-dependent protease La (LON) domain. no signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3814
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: azo3815
symbol: azo3815
gene_biotype: protein_coding
description:
  Probable phasin. Homology to p8 of Sphingomonas sp. A1 of 49% (gi|51773776|dbj|BAD38885.1|(NBCI ENTREZ)). No domains predicted. No TMHs. No signal peptide.,; Function unclear.


ensembl_gene_id: azo3817
symbol: azo3817
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to slr1189 of Synechocystis of 43% (trembl|P74718). Pfam: Homocystein S-transferase. no signal peptide. no TMHs.


ensembl_gene_id: azo3818
symbol: livK5
gene_biotype: protein_coding
description:
  Putative leucine-specific binding protein; In enteric bacteria such as E. coli and Salmonella typhimurium, periplasmic binding proteins are found to participate in the transport of amino acids, sugars and ions. Leucine-specific binding protein are coded by livK and livJ. Similar to sprot|LIVK_SALTY (20%) and to tremblnew|CAE26678 (39%). Pfam (PF01094): Receptor family ligand binding region SignalP reporting Signal peptide; Specificity unclear.


ensembl_gene_id: azo3819
symbol: livM6
gene_biotype: protein_coding
description:
  Putative branched-chain amino acid transporter permease. Homology to livM of E. coli of 32%. Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane. InterPro: Binding-system dependent bacterial transporters (araH livH/limM families) Pfam: Branched-chain amino acid transport system. signal peptide probable 10 TMHs; Specificity unclear.


ensembl_gene_id: azo3820
symbol: azo3820
gene_biotype: protein_coding
description:
  ABC transporter permease protein; Branched-chain amino acid transport system typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system.The integral inner-membrane proteins translocate the substrate across the membrane. Similar to trembl|Q89C65 (46%), to sprot|LIVH_ECOLI (33%) and to sprot|BRAD_PSEAE (30%). Pfam (PF02653): Binding-system dependent bacterial transporters (araH, livH/limM families) TMHMM reportin [...]


ensembl_gene_id: azo3821
symbol: ncd2-2
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase precursor (EC 1.13.11.32) (Nitroalkane oxidase) (2-NPD). SPROT:Q01284: 28% identity, 44% similarity CATALYZES THE OXIDATION OF NITROALKANES TO PRODUCE THE CORRESPONDING CARBONYL COMPOUNDS. IT ACTS ON 2-NITROPROPANE BETTER THAN ON NITROETHANE AND 1-NITROPROPANE AND ANIONIC FORMS OF NITROALKANES ARE MUCH BETTER SUBSTRATES THAN ARE NEUTRAL FORMS. InterPro: 2-nitropropane dioxygenase InterPro; IPR004136; 2nprop_dioxygen. InterPro; IPR003009; FMN_enzyme. Pfam; PF03060; NPD thiE: thiamine-phosphate pyrophosphoryl Non-secretory protein with signal peptide probabilit [...]


ensembl_gene_id: azo3822
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: azo3823
symbol: ycbL
gene_biotype: protein_coding
description:
  Hypothetical protein ycbL. TREMBL:Q7P1X5-63% identity. Interpro:IPR001279-Blactamase like Pfam-GlyoxylaseII family relationship. Phosphoribosylglycinamide synthetase,Respiratory chain NADH dehydrogenase; KH domain and RTX toxin acyltransferase family relationship. ispD: 4-diphosphocytidyl-2C-methyl-D-ery; High confidence in function and specificity.


ensembl_gene_id: azo3824
symbol: imp
gene_biotype: protein_coding
description:
  Inositol-1(or4)-monophosphatase 3IMPase3)(IMP3)(Inositol monophosphatase 3).Responsible for the provision of inositol required for synthesis of phosphatidylinositol and polyphosphoinositides. 26% Inositol_P. Pfam:PF00459; Inositol_P; 1; High confidence in function and specificity.


ensembl_gene_id: azo3825
symbol: fbpA2
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex FbpABC involved in ferric import. Similar to the putative periplasmic-binding protein FbpA precursor in A. pleuropneumoniae. 39% SBP_bac_1. Pfam:PF01547; SBP_bac_1; 1. Signal peptide:1 TMHelix:1; Specificity unclear.


ensembl_gene_id: azo3826
symbol: fbpC2
gene_biotype: protein_coding
description:
  Fe3+-transporting ATPase; Ferric cations import ATP-binding protein fbpC (EC 3.6.3.30).Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in ferric cations import. Responsible for energy coupling to the transport system. 41% AAA_ATPase. IPR003439; ABC_transporter. Pfam: PF00005;ABC_tran; 1; Specificity unclear.


ensembl_gene_id: azo3827
symbol: azo3827
gene_biotype: protein_coding
description:
  Putative ferrric transport system, permease protein; Region start changed from 4186498 to 4186630 (-132 bases).


ensembl_gene_id: azo3828
symbol: glpR
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate regulon repressor. 26% HTH_DeoR. Pfam:PF00455; DeoR; 1. Nucleic acid binding motif, present; High confidence in function and specificity.


ensembl_gene_id: azo3829
symbol: eutB
gene_biotype: protein_coding
description:
  Probable ethanolamine ammonia-lyase (EC 4.3.1.7) large subunit. Homology to eutB of S. typhimurium of 50% (trembl|Q8XUQ9) Catalyzes the deamination of various vicinal amino- alcohols to oxo compounds. no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3830
symbol: eutC
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase (EC 4.3.1.7) small subunit. Homology to eutC of S. typhimurium of 35% (sprot|EUTC_SALTY) catalyzes the deamination of various vicinal amino- alcohols to oxo compounds. no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3831
symbol: azo3831
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to rpa0361 of R. palustris off 67% (tremblnew|CAE25805). no domains predicted .signal peptide. TMH in signal peptide; Conserved hypothetical protein.


ensembl_gene_id: azo3833
symbol: azo3833
gene_biotype: protein_coding
description:
  31% HTH_9; 1. InterPro: IPR003725; ModE:Molybdenum-binding protein N-terminal. ModE are involved in molybdenum transport.These proteins acts both as a repressor and activator of the mod and moa operons,respectively, depending on the properties of the binding site; High confidence in function and specificity.


ensembl_gene_id: azo3834
symbol: azo3834
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to vv12967 of V. vulnificus of 47% (trembl|Q8D8K5). Pfam: DUF1111. no signal peptide. no TMHs.


ensembl_gene_id: azo3835
symbol: pgtC
gene_biotype: protein_coding
description:
  Putative regulatory lipoprotein; Phosphoglycerate transport regulatory protein pgtC precursor.Required for pgtP expression it may act jointly with the pgtA/pgtB signaling proteins.29% SBP_bac_1: Bacterial extracellular solute-binding protein family 1. Pfam:PF01547; SBP_bac_1; 1. Signal peptide:present; High confidence in function and specificity.


ensembl_gene_id: azo3836
symbol: azo3836
gene_biotype: protein_coding
description:
  Probable Iron-regulated outer membrane TonB-dependent receptor. 35% TonB_receptor.IPR010917; TonB_recept_C.IPR010105; TonB_siderophor. Pfam:PF00593; TonB_dep_Rec; 1. TIGRFAMs:TIGR01783; TonB-siderophor; 1. Signal peptide:present; Function unclear.


ensembl_gene_id: azo3837
symbol: modC1
gene_biotype: protein_coding
description:
  Putative molybdenum transport system, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: azo3838
symbol: modB1
gene_biotype: protein_coding
description:
  Putative molybdenum transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: azo3839
symbol: modA1
gene_biotype: protein_coding
description:
  Putative molybdate transport system, periplasmic-binding protein; 73% MolP_ABC_transpt.IPR000437; prok_lipoprot_S. IPR006059; SBP_bac_1. Pfam:PF01547; SBP_bac_1; 1. TIGRFAMs:TIGR01256; modA; 1. Signal peptide: present; High confidence in function and specificity.


ensembl_gene_id: azo3840
symbol: modE
gene_biotype: protein_coding
description:
  Putative molybdenum transport protein; 80% ModE.IPR004606; Mop.IPR008995; MOP_like.IPR005116; TOBE.Molybdenum-binding protein N-terminal. Pfam:PF02573; HTH_9; 1.PF03459; TOBE; 2. TIGRFAMs:TIGR00637; ModE_repress; 1:ModE molybdate transport.TIGR00638; Mop; 2; High confidence in function and specificity.


ensembl_gene_id: azo3841
symbol: modG
gene_biotype: protein_coding
description:
  Putative molybdenum-pterin-binding-protein; 80% Mop.IPR008995;MOP_like.IPR005116;TOBE.InterPro: Molybdenum-pterin binding domain. Mop: molybdenum-pterin binding domain Pfam: PF03459; TOBE; 2. TIGRFAMs:TIGR00638; Mop; 2; High confidence in function and specificity.


ensembl_gene_id: azo3842
symbol: modC2
gene_biotype: protein_coding
description:
  Putative molybdate transport system ATP-binding protein; 39% AAA_ATPase superfamily. IPR003439; ABC_transporter. IPR008995; MOP_like:molybdenum-pterin binding domain.IPR005116; TOBE. Pfam:PF00005; ABC_tran; 1.PF03459; TOBE; 1; High confidence in function and specificity.


ensembl_gene_id: azo3843
symbol: azo3843
gene_biotype: protein_coding
description:
  Putative exported protein.SignalP reporting signal peptice. Most likely cleavage site between pos. 27 and 28: AHA-AP; Function unclear.


ensembl_gene_id: azo3845
symbol: modB2
gene_biotype: protein_coding
description:
  Putative molybdenum ABC transporter permease protein; 36% BPD_transp.Binding-protein-dependent transport systems inner membrane component. Pfam:PF00528; BPD_transp; 1. TMHelix:5 Signal peptide:present; High confidence in function and specificity.


ensembl_gene_id: azo3846
symbol: modA2
gene_biotype: protein_coding
description:
  Putative molybdate transport system substrate-binding protein; 23% MolP_ABC_transpt.IPR000437; prok_lipoprot_S. IPR006059; SBP_bac_1. Pfam:PF01547; SBP_bac_1; 1. TIGRFAMs:TIGR01256; modA; 1. Signal peptide: present; High confidence in function and specificity.


ensembl_gene_id: azo3847
symbol: azo3847
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to Daro03003735 of Dechloromonas aromatica of 35% (gi|41722661|ref|ZP_00149650.1|(NBCI ENTREZ)). no domains predicted. no signal peptide. no TMHs.


ensembl_gene_id: azo3850
symbol: recD
gene_biotype: protein_coding
description:
  DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the  [...]


ensembl_gene_id: azo3851
symbol: recB
gene_biotype: protein_coding
description:
  ATP-dependent exoDNAse beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...]


ensembl_gene_id: azo3852
symbol: irgA2
gene_biotype: protein_coding
description:
  Putative TonB-dependent receptor; 24% TonB_boxC. Pfam:PF00593; TonB_dep_Rec; 1. Signal peptide present; High confidence in function and specificity.


ensembl_gene_id: azo3854
symbol: ligT
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: azo3855
symbol: azo3855
gene_biotype: protein_coding
description:
  Alkaline phosphatase (EC 3.1.3.1) (ALP)is a zinc and magnesium-containing metalloenzyme which hydrolyzes phosphate esters, optimally at high pH.It is found in nearly all living organisms,with the exception of some plants. 30% Alk_phosphtse.Alkaline phosphatase family Pfam:PF00245; alk_phosphatase; 1. Signal peptide present; High confidence in function and specificity.


ensembl_gene_id: azo3856
symbol: azo3856
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to Avin02002740 of Azotobacter vinelandii of 66% (gi|23103854|ref|ZP_00090328.1|(NBCI ENTREZ)). no domains predicted. signal peptide. no TMHS; Conserved hypothetical protein.


ensembl_gene_id: azo3857
symbol: paaG6
gene_biotype: protein_coding
description:
  Putative enoyl-CoA hydratase paaG; Function:- Could possibly oxidizes fatty acids using specific components (By similarity). Activity:-(3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O. Entry name:- SWISSPROT:PAAG_ECOLI InterPro:- IPR001753; EnCoA_hydrtse. Pfam:- PF00378; ECH; 1. Identities = 65/222 (29%) Prediction: Non-secretory protein Signal peptide probability: 0.000 Number of predicted TMHs: 0; Family membership.


ensembl_gene_id: azo3860
symbol: yeaU
gene_biotype: protein_coding
description:
  Tartrate dehydrogenase catalyzes the reduction of tartrate to oxaloglycolate. Similar to sprot|TTUC_ECOLI (75%) and to sprot|TTUC_PSEPU (76%). Pfam (PF00180): Isocitrate and isopropylmalate dehydrogenases; High confidence in function and specificity.


ensembl_gene_id: azo3861
symbol: azo3861
gene_biotype: protein_coding
description:
  Hypothetical protein, 73% identity(87% similarity) to TrEMBL;Q8XU60. No domains, repeats, motifs or features not present; Function unclear.


ensembl_gene_id: azo3862
symbol: azo3862
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. Homology to rsc2949 of R. solanacearum of 54% (trembl|Q8XV82(SRS)). Tigrfam: TIGR00427: conserved hypothetical protein. Pfam: Uncharacterised protein family. signal peptide. 5 TMHs.


ensembl_gene_id: azo3863
symbol: azo3863
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to ebA2737 of Azoarcus sp. EbN1 of 63% (gnl|keqq|eba:ebA2737(KEGG)). no domains predicted. no signal peptide. no TMHs.


ensembl_gene_id: azo3864
symbol: azo3864
gene_biotype: protein_coding
description:
  Conserved hypothetical cytochrome c family protein. Homology to gsu2513 of G. sulfurreducens of 36% (tremblnew|AAR35886). Pfam: Cytochrome c. singal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3865
symbol: exaA5
gene_biotype: protein_coding
description:
  Quinoprotein ethanol dehydrogenase precursor (QEDH). Oxidizes primary alcohols and also acts on secondary alcohol, but not highly active on methanol. 32% Bac_PQQ.IPR002372; Bac_PQQ_repeat. Pfam:PF01011; PQQ; 2. Signal peptide:present. SWISSPROT:DHET_GLUOX:O05542.30%; High confidence in function and specificity.


ensembl_gene_id: azo3866
symbol: azo3866
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to GOX0515 of Gluconobacter oxydans of 36% (gnl|keqq|gox:GOX0515(KEGG)). no domains predicted. signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3867
symbol: acoA2
gene_biotype: protein_coding
description:
  Probable acetoin dehydrogenase, alpha subunit. Homology to acoA of C. magnum of 42% (trembl|Q46142) CATALYZES THE 26-DICHLOROPHENOLINDOPHENOL-DEPENDENT CLEAVAGE OF ACETOIN INTO ACETATE AND ACETALDEHYDE IN VITRO. THE ALPHA SUBUNIT IS PROBABLY THE CATALYTIC SUBUNIT OF THE ENZYME. Pfam: Dehydrogenase E1 component no signal peptide no TMHs; Family membership.


ensembl_gene_id: azo3868
symbol: acoB2
gene_biotype: protein_coding
description:
  Probable acetoin dehydrogenase, beta subunit. Homology to acoB of. A. eutrophus of 48% (sprot|ACOB_ALCEU) Probable TPP-dependent acetoin dehydrogenase, beta subunit. Homology to acoB of A. eutrophus of 41% (sprot|ACOB_ALCEU) Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde, in vitro. The beta subunit is probably not the catalytic subunit of the enzyme. InterPro: Transketolase (IPR005474) Pfam: Transketoase,pyridine binding domain; Transketolase, C-terminal domain no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3869
symbol: azo3869
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to oadh21d of H. volcanii of 33% (trembl|Q8U4T3). Pfam: Biotin-requiring enzyme. Interpro: Biotin/Lipoyl attachment (IPR000089). no signal peptide. no TMHs.


ensembl_gene_id: azo3870
symbol: azo3870
gene_biotype: protein_coding
description:
  Hypothetical protein. Homology of the entire orf to the C-terminus of dihydrolipoamide acetyltransferase. Pfam: 2-0xo acid dehydrogenase acyltransferase no TMHs no signal peptide.


ensembl_gene_id: azo3871
symbol: azo3871
gene_biotype: protein_coding
description:
  Putative lipoate protein ligase, has weak homology with hits. 35% identity with TrEMBL;Q81M24,Q818P0. Has Signal peptide. Has PF03099, Biotin/lipoate A/B protein ligase family;IPR004143 BPL_LipA_LipB; This family includes biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organism probab [...]


ensembl_gene_id: azo3872
symbol: azo3872
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology blr7490 of B.japonicum of 47% (trembl|Q89DE9(SRS)). No domains predicted .No TMHs. Signal peptide: present; Conserved hypothetical protein.


ensembl_gene_id: azo3873
symbol: azo3873
gene_biotype: protein_coding
description:
  Putative glucase dehydrogenase alpha subunit. Homology to gdhalspha of B. cepacia of 31% (trembl|Q8GQE7). Pfam: GMC oxidoreductase no signal peptide no TMHs; Function unclear.


ensembl_gene_id: azo3875
symbol: azo3875
gene_biotype: protein_coding
description:
  Sigma-54-dependent transcriptional regulator; Similar to SWISSPROT:P28614 (44% identity); TREMBL:Q9HWN4 (40% identity); TREMBL:Q92X60 (38% identity). Pfam (PF02954): Bacterial regulatory protein,Fis family. Pfam (PF00158): Sigma-54 interaction domain. HTH reporting nucleic acid binding motif; Family membership.


ensembl_gene_id: azo3876
symbol: azo3876
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Rhs family protein,vgrG 38% identity(54% similarity) to TrEMBL;Q747T8. TrEMBL;O52672. Signal Peptide Present. Has PF04524, Protein of unknown function,DUF586;IPR006533, Rhs_Vgr:This family contains a conserved region in several bacterial proteins of unknown function. These sequences represent the Vgr family of proteins,associated with some classes of Rhs elements. This model does not include a large octapeptide repeat region,VGXXXXXX, found in the Vgr of Rhs classes G and E. Has PF06715, Gp5 C-terminal repeat (2 copies);IPR010609,Gp5_C:This repeat compos [...]


ensembl_gene_id: azo3877
symbol: azo3877
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to GSU3186 of G.sulfurreducens of 36% (tremblnew|AAR36577(SRS)). No domains predicted. No TMHs. No signal peptide.


ensembl_gene_id: azo3879
symbol: azo3879
gene_biotype: protein_coding
description:
  Hypothetical protein predicted by Glimmer/Critica. no homology of the entier protein to the data bank. no domains predicted. no signal peptide. no TMHs.


ensembl_gene_id: azo3880
symbol: azo3880
gene_biotype: protein_coding
description:
  Hypothetical protein. Homology to LA1152 of L.interrogans of 28% (trembl:Q8F6Z6). No domains predicted. No signal peptide. No TMHs.


ensembl_gene_id: azo3881
symbol: azo3881
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to GSU3182 of G.sulfurreducens of 42% (tremblnew|AAR36573(SRS)). No domains predicted. No TMHs. No signal peptide.


ensembl_gene_id: azo3882
symbol: azo3882
gene_biotype: protein_coding
description:
  Hypothetical protein, 40% similarity to TrEMBL: O86588. No domains, repeats, motifs or features predicted present; Function unclear.


ensembl_gene_id: azo3883
symbol: azo3883
gene_biotype: protein_coding
description:
  Hypothetical protein,35% identity(53% similarity) to TrEMBL;Q9I731. Very Poor homology with hits in the database over the entire length of protein! No Signal peptide or TMH reported Present; Family membership.


ensembl_gene_id: azo3886
symbol: azo3886
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. Homology to cv1891 of C. violaceum of 27% (TrEMBL:Q7NWT8). no domains predicted. signal peptide. no TMHs.


ensembl_gene_id: azo3887
symbol: azo3887
gene_biotype: protein_coding
description:
  Hypothetical secreted protein. no Homology of the entiere protein to the data bank. no domains predicted. singal peptide. no TMHs.


ensembl_gene_id: azo3888
symbol: azo3888
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase pknA (EC 2.7.11.1). Probably required for both normal cellular growth and differentiation. Inactivation of pknA leads to colonies that appear light green and rough in the absence of combined nitrogen. Pfam: Protein kinase domain; Family membership.


ensembl_gene_id: azo3889
symbol: azo3889
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to PA0076 of P.aeruginosa of 38% (trembl:Q9I756). No domains predicted. No TMHs. No signal peptide.


ensembl_gene_id: azo3890
symbol: imcF
gene_biotype: protein_coding
description:
  Conserved hypothetical ImcF-related protein. Homology to BPP0730 of Bordetella parapertussis of 45% (gnl|keqq|bpa:BPP0730(KEGG)). Has Signal Peptide. TMHMM2 reporting 2 TMH's present. Coils2 Program reporting presence of Coiled-Coil. Has PF06761, ImcF-related;IPR009612; This family represents a conserved region within several bacterial proteins that resemble ImcF, which has been proposed to be involved in Vibrio cholerae cell surface reorganisation, resulting in increased adherence to epithelial cells and increased conjugation frequency. Note that many family members are hypothetical p [...]


ensembl_gene_id: azo3891
symbol: ompA2
gene_biotype: protein_coding
description:
  Putative outer membrane protein, OmpA family,36% identity(51%similarity) to TrEMBL;Q93IS0.TrEMBL;Q7AXY6(36% identity) TMHMM2 reporting presence of 1 TMH's. Has PF00691, OmpA family;IPR006665, OmpA/MotB:Most of the bacterial outer membrane proteins in this group are porin-like integral membrane proteins (such as ompA) MEDLINE:,but some are small lipid-anchored proteins.It is also found in MotB and related proteins. They are present in the outer membrane of many Gram-negative organisms; Conserved hypothetical protein.


ensembl_gene_id: azo3892
symbol: impJ
gene_biotype: protein_coding
description:
  Conserved hypothetical protein,40% Identity (57% similarity)to TrEMBL;Q93EC4 Has PF05936, Bacterial protein of unknown function (DUF876);IPR010263;This family consists of a series of hypothetical bacterial sequences of unknown function.


ensembl_gene_id: azo3893
symbol: azo3893
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to PA1666 of P.aeruginosa of 37% (trembl|Q9I359(SRS)). Signal peptide present. No TMH or any other domains/features reported present; Conserved hypothetical protein.


ensembl_gene_id: azo3894
symbol: sciA
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein,sciA. TrEMBL;Q83SK5, Q7AXZ5 Has PF06812, ImpA-related N-terminal;IPR010657,ImpA_N;This family represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans. Note that many family members are hypothetical proteins; Conserved hypothetical protein.


ensembl_gene_id: azo3895
symbol: sciH
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein,sciH, 71% identity(87% similarity) to TrEMBL;Q7AXZ1. Has PF05591, Protein of unknown function (DUF770);IPR008312,UCP028301;This family consists of several proteins of unknown function from various bacterial species. These proteins are encoded in pathogenic and symbiotic bacteria as part of an operon (part of the SCI genomic island in Salmonella enterica and the imp locus in Rhizobium leguminosarum) implicated in pathogenicity and protein secretion.These proteins are SciH/ImpB; High confidence in function and specificity.


ensembl_gene_id: azo3896
symbol: sciI
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein, sciI, 68% identity(80% similarity) to TrEMBL;Q93IS7. Has PF05943,Protein of unknown function (DUF877);IPR010269;This family consists of a number of uncharacterised bacterial proteins. The function of this family is unknown; High confidence in function and specificity.


ensembl_gene_id: azo3897
symbol: sciM
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein,sciM, 33% identity(50% similarity) to TrEMBL;Q7AXY8. Has PF05638,Protein of unknown function (DUF796);IPR008514;This family consists of several bacterial proteins of unknown function; High confidence in function and specificity.


ensembl_gene_id: azo3898
symbol: sciK
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein,sciK, 33% identity to TrEMBL;Q7AXZ0. Has PF05638, Protein of unknown function (DUF796);This family consists of several bacterial proteins of unknown function. Signal Peptide or TMH absent; Conserved hypothetical protein.


ensembl_gene_id: azo3899
symbol: sciE
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein,sciE, 37% identity(52% similarity) to TrEMBL;Q93IT1. Has PF07024, ImpE protein;This family consists of several bacterial proteins including ImpE (Q93EC9) from Rhizobium leguminosarum. It has been suggested that the imp locus is involved in the secretion to the environment of proteins, including periplasmic RbsB protein, that cause blocking of infection specifically in pea plants.The exact function of this family is unknown; High confidence in function and specificity.


ensembl_gene_id: azo3900
symbol: sciD
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein, sciD,34% identity (50% similarity) to TrEMBL; Q7AXZ4. Has PF07025, Protein of unknown function (DUF1316);IPR010745;This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown; Conserved hypothetical protein.


ensembl_gene_id: azo3901
symbol: sciC
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein, sciC, 42% identity (57% similarity) to TrEMBL; Q93IT3. Has PF05947, Bacterial protein of unknown function (DUF879);IPR010272; This family consists of several hypothetical bacterial proteins of unknown function; Function unclear.


ensembl_gene_id: azo3902
symbol: sciB
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein, sciB. TrEMBl;Q93IT4(36% identity) Has PF06996;Protein of unknown function (DUF1305);IPR010732; This family consists of several hypothetical bacterial proteins of around 300 residues in length. The function of this family is unknown although one member (Q93IT4) from Salmonella enterica is thought to be involved in virulence; Conserved hypothetical protein.


ensembl_gene_id: azo3903
symbol: clpB2
gene_biotype: protein_coding
description:
  Putative ATP-dependent Clp protease, ATP-binding subunit ClpB. Homology to clpB of E. coli of 38% (sprot|CLPB_ECOLI). The protein is thought to be subunits of ATP-dependent proteases which act as chaperones to target the proteases to substrates. Pfam: ATPsae family associated with various cellular activites no signal peptide no TMHs; High confidence in function and specificity; Belongs to the ClpA/ClpB family.


ensembl_gene_id: azo3905
symbol: azo3905
gene_biotype: protein_coding
description:
  Putative lipase family protein; Entry name:- TREMBL:Q7MFV5 Identities = 112/345 (32%), InterPro:- IPR002921; Lipase_3. Pfam:- PF01764; Lipase_3; 1. Prediction: Non-secretory protein Signal peptide probability: 0.074 Number of predicted TMHs: 0; Family membership.


ensembl_gene_id: azo3906
symbol: azo3906
gene_biotype: protein_coding
description:
  Hypothetical protein. No homology over the entire length with the data base. Pfam: Phosphatidylinositol-specific phospholipase C, X domain. Interpro: Phosphatidylinositol-specific phospholipase C, X region (IPR000909). No TMHs. No signal peptide.


ensembl_gene_id: azo3907
symbol: azo3907
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to xac4125 of X. axonopodis of 42% (trembl|Q8PF60). Domain structure: 5 x TRP, 50 aa - 83 aa; 84 aa - 117 aa; 118 aa - 151 aa; 152 aa - 182 aa; 186 aa - 219 aa. InterPro: TPR repeat (IPR001440); SAM (and some other nucleotide) binding motif (IPR000051). Pfam: TPR daomian. no signal peptide. no TMHs.


ensembl_gene_id: azo3908
symbol: azo3908
gene_biotype: protein_coding
description:
  PutativeSerine/threonine-protein kinase (EC 2.7.11.1) (NimA-related protein kinase 4) (Serine/threonine protein kinase 2). Seems to act exclusively upon threonine residues. Pfam: Protein kinase domain; Family membership.


ensembl_gene_id: azo3911
symbol: fabF2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase; CATALYZES THE CONDENSATION REACTION OF FATTY ACID SYNTHESIS BY THE ADDITION TO AN ACYL ACCEPTOR OF TWO CARBONS FROM MALONYL-ACP. HAS A PREFERENCE FOR SHORT CHAIN ACID SUBSTRATES AND MAY FUNCTION TO SUPPLY THE OCTANOIC SUBSTRATES FOR LIPOIC ACID BIOSYNTHESIS (BY SIMILARITY),TREMBL:Q8P3S1 (45% identity); TREMBL:Q87CD9 (41% identity). InterPro (IPR000794): Beta-ketoacyl synthase. Pfam (PF02801): Beta-ketoacyl synthase, C-terminal domain. Pfam (PF00109): Beta-ketoacyl synthase, N-terminal domain. Signal P reporting signal peptide; High confidence  [...]


ensembl_gene_id: azo3912
symbol: azo3912
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to RSc0426 of R.solanacearum of 51% (trembl:Q8Y2B0). No domains predicted. No signal peptide. No TMHs.


ensembl_gene_id: azo3913
symbol: azo3913
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Entry name:- TREMBL:Q8Y2B1 Prim. accession # Q8Y2B1 Identities = 64/116 (55%) Prediction: Non-secretory protein Signal peptide probability: 0.000 Number of predicted TMHs: 0.


ensembl_gene_id: azo3914
symbol: fabG2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; The short-chain dehydrogenases/reductases family (SDR) is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases,TREMBL:Q8PF93 (52% identity); TREMBL:Q8Y2A1 (53% identity). Pfam (PF00106): Short chain dehydrogenase; High confidence in function and specificity.


ensembl_gene_id: azo3915
symbol: azo3915
gene_biotype: protein_coding
description:
  Putative Na/H(+) antiporter; 23% K_eff.IPR006153; Na_H_porter. Pfam:PF00999; Na_H_Exchanger; 1. TIGRFAMs:TIGR00932; 2a37; 1. TMHelix: 11; High confidence in function and specificity.


ensembl_gene_id: azo3916
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: azo3918
symbol: azo3918
gene_biotype: protein_coding
description:
  Putative phospholipid biosynthesis acyltransferase,30% Identity to TrEMBL;Q8FJ00.Q8X6N6 Has Signal Peptide. Has SMART;SM00563, PlsC, Phosphate acyltransferases;Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.


ensembl_gene_id: azo3919
symbol: mipA
gene_biotype: protein_coding
description:
  MltA-interacting protein precursor. MAY SERVE AS A SCAFFOLD PROTEIN REQUIRED FOR THE FORMATION OF A COMPLEX WITH MRCB/PONB AND MLTA THIS COMPLEX COULD PLAY A ROLE IN ENLARGEMENT AND SEPTATION OF THE MUREIN SACCULUS; High confidence in function and specificity.


ensembl_gene_id: azo3920
symbol: azo3920
gene_biotype: protein_coding
description:
  Conserved Hypothetical protein, Most Hits in the data base suggest to Pteridine-dependent deoxygenase like protein,TrEMBL;Q8P3Q5. Has PF01042 Endoribonuclease L-PSP,(IPR006175:Endoribon_LPSP);This domain is found in endoribonuclease, that is active on single-stranded mRNA and inhibits protein synthesis by cleavage of mRNA. Previously it was thought to inhibit protein synthesis initiation.This endoribonuclease may also be involved in the regulation of purine biosynthesis. No Signal peptide or TMH present!; Family membership.


ensembl_gene_id: azo3921
symbol: azo3921
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to xcc4013 of X. campestris of 46% (trembl|Q8P3Q6). InterPro: Monooxygenases FAD binding domain (IPR002938); NAD binding site (IPR000205) Pfam: FAD binding domain; Monooxygenase FAD binding domain. no signal peptide. no TMHs.


ensembl_gene_id: azo3922
symbol: azo3922
gene_biotype: protein_coding
description:
  Conserved hypothetical secred protein. Homology to xac4267 of X. axonopodis of 41% (trembl|Q8PES3). no domains predicted .signal peptide. no TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3923
symbol: lrp2
gene_biotype: protein_coding
description:
  Probable leucine-responsive regulatory protein. Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different opreons; Lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes. Similar to SWISSPROT: sprot|LRP_ECOLI (49% Escherichia coli, leucine-responsive regulatory protein Lrp) InterPro: IPR000485 HTH_AsnC_lrp. Pfam: PF01037 AsnC family. HTH reporting nucleic acid binding motif; High confidence in function and specificity.


ensembl_gene_id: azo3925
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: azo3926
symbol: azo3926
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to Daro03003529 of Dechloromonas aromatica of 39% (gi|41722979|ref|ZP_00149945.1|(NBCI ENTREZ)). no domains predicted. no signal peptide. no TMH.


ensembl_gene_id: azo3927
symbol: cycH
gene_biotype: protein_coding
description:
  Conserved hyppthetical cytochrome c-type biogenesis protein CycH. Homology to cycH of Azoarcus sp. EbN1 of 50% (gnl|keqq|eba:ebA3526(KEGG)). REQUIRED FOR THE BIOGENESIS OF C-TYPE CYTOCHROMES. POSSIBLE SUBUNIT OF A HEME LYASE (BY SIMILARITY). signal peptide. 1 TMHs; Conserved hypothetical protein.


ensembl_gene_id: azo3929
symbol: ccmG
gene_biotype: protein_coding
description:
  Probable thiol disulfide interchange protein. Involved in disulfide bond formation. Catalyzes a late reductive step in the assembly of periplasmic c-type cytochromes probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme lyase (By similarity). InterPro: Periplasmic protein thiol:disulfide oxidoreductase DsbE (IPR004799) Interpro: Thioredoxin (IPR006662) Tigrfam: dsbE: periplasmic protein thiol:disulfide axidoreductase, DsbE superfamily signal peptide Probable 1 TMH; Family membership.


ensembl_gene_id: azo3930
symbol: ccmF
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein ccmF. Homology to ccmF of E. coli of 63% (sprot|CCMF_ECOLI). REQUIRED FOR THE BIOGENESIS OF C-TYPE CYTOCHROMES. POSSIBLE SUBUNIT OF A HEME LYASE. Tigrfam: nerF: cytochrome c-type biogenesis protein ccmF Pfam: Cytochrome C assembly protein probably signal peptide probably 15 THMs; High confidence in function and specificity.


ensembl_gene_id: azo3931
symbol: ccmE
gene_biotype: protein_coding
description:
  Probable cytochrome C-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: azo3932
symbol: ccmD
gene_biotype: protein_coding
description:
  Conserved hypothetical heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: azo3933
symbol: ccmC
gene_biotype: protein_coding
description:
  Probable heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: azo3935
symbol: ccmB
gene_biotype: protein_coding
description:
  Probable heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: azo3936
symbol: ccmA
gene_biotype: protein_coding
description:
  Probable heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: azo3937
symbol: azo3937
gene_biotype: protein_coding
description:
  Putative aerotaxis receptor, sensory_box TMHMM reporting 2 transmembrane helices. HTH reporting nucleic acid binding motif. Aerotaxis receptor. SIGNAL TRANSDUCER FOR AEROTAXIS. THE AEROTACTIC RESPONSES IS THE ACCUMULATION OF CELLS AROUND AIR BUBBLES. THE NATURE OF THE SENSORY STIMULUS DETECTED BY THIS PROTEIN IS THE PROTON MOTIVE FORCE OR CELLULAR REDOX STATE. IT USES A FAD PROSTHETIC GROUP AS A REDOX SENSOR TO MONITOR OXYGEN LEVELS; Specificity unclear.


ensembl_gene_id: azo3938
symbol: napC2
gene_biotype: protein_coding
description:
  Probable cytochrome c-type protein NapC. Homology to napC of R. sphaeroides of 57% (sprot|NAPC_RHOSH). MEDIATES ELECTRON FLOW FROM QUINONES TO THE NAPAB COMPLEX. no signal peptide probable 1 TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3939
symbol: napB2
gene_biotype: protein_coding
description:
  Probable diheme cytochrome c; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: azo3940
symbol: napH
gene_biotype: protein_coding
description:
  Probabe iron-sulfur 4Fe-4s ferredoxin transmembrane protein. Homology to napH of E. coli of 43% (sprot|NAPH_ECOLI) Involved in a membrane generated redox potential. InterPro: 4Fe-4S ferredoxin iron-sulfur binding domain (IPR001450) Pfam: 4Fe-4S binding domain no signal peptide 4 TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3941
symbol: napG
gene_biotype: protein_coding
description:
  Probable ferredoxin-type protein napG. Homology to napG of E. coli of 57% (sprot|NAPG_ECOLI). Involved in electron transfer in a wide variety of metabolic reactions. InterPro: MauM/NapG family ferredoxin-type protein (IPR004494); 7 Fe ferredoxin (IPR000813); 4Fe-4S ferredoxin; iron-sulfur binding domain (IPR001450) Pfam: 4Fe-4S binding domain Tigrfam: mauM_napG: MauM/NapG family ferredoxin-type protein no signal peptide no TMHs; High confidence in function and specificity.


ensembl_gene_id: azo3942
symbol: napA2
gene_biotype: protein_coding
description:
  Probable nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: azo3943
symbol: napD2
gene_biotype: protein_coding
description:
  Probable NapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: azo3944
symbol: napF
gene_biotype: protein_coding
description:
  Probable ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.


ensembl_gene_id: azo3948
symbol: azo3948
gene_biotype: protein_coding
description:
  Putative DNA-directed polymerase III; Excinuclease cho (EC 3.1.25.-) (Endonuclease cho) (UvrC homolog protein). Incises the DNA at the 3 side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than uvrC. Not able to incise the 5 site of a lesion. When a lesion remains because uvrC is not able to induce the 3 incision cho incises the DNA. Then uvrC makes the 5 incision. The combined action of cho and uvrC broadens the substrate range of nucleotide excision repair (By similarity); Specificity unclear.


ensembl_gene_id: azo3950
symbol: azo3950
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to RS02765 of R.solanacearum of 43% (trembl:Q8XWT5). No domains predicted. No TMHs. No signal peptide.


ensembl_gene_id: azo3951
symbol: spoT
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: azo3952
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: azo3954
symbol: azo3954
gene_biotype: protein_coding
description:
  Isochorismatase family protein; Similar to TREMBL:Q9HXG0 (60% identity); TREMBL:Q7NRZ4 (45% identity); TREMBL:Q88GB8 (43% identity). InterPro (IPR000868): Isochorismatase hydrolase. Pfam (PF00857): Isochorismatase family; Specificity unclear.


ensembl_gene_id: azo3955
symbol: azo3955
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to Daro03000439 of Dechloromonas aromatica of 48% (gi|41725494|ref|ZP_00152252.1|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs.


ensembl_gene_id: azo3956
symbol: azo3956
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, has weak homlogs in the Database. TrEMBL;Q88I83(25% Identity). gi|46140644|ref|ZP_00152253.2|, 30% Identity to Dechloromonas aromatica RCB,Nucleotidyltransferase/DNA polymerase involved in DNA repair Has PF00817,impB/mucB/samB family; IPR001126, UMUC_like; These proteins are involved in UV protection.In Escherichia coli, UV and many chemicals appear to cause mutagenesis by a process of translesion synthesis that requires DNA polymerase III and the SOS-regulated proteins UmuD, UmuC and RecA. This machinery allows the replication to continue through DNA le [...]


ensembl_gene_id: azo3957
symbol: dnaE2
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit, putative; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: azo3958
symbol: pcaC
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family protein,65% Identity (78% similarity) to TrEMBL;Q8EKK9. Has PF02627, Carboxymuconolactone decarboxylase family; IPR003779, CMD: Carboxymuconolactone decarboxylase (CMD)is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway. In these bifunctional proteins (e.g. O67982) CMD represents the C-terminal domain, Abhydrolase_1 represents the N-terminal domain; High confidence in function and specificity.


ensembl_gene_id: azo3960
symbol: yicC
gene_biotype: protein_coding
description:
  Putative alpha helix protein,yicC.42% identity(57% Similarity) to SwissProt;P23839, TrEMBL;Q8XD97(42%). TrEMBL; Q8XXF8(45% identity). Coils2 program reports the presence of Coiled-Coil. Has PF03755, YicC-like family, N-terminal region; IPR005229, Cons_hypoth255: Family of bacterial proteins. Although poorly characterised, the members of this protein family have been demonstrated to play a role in stationary phase survival. These proteins are not essential during stationary phase; Conserved hypothetical protein.


ensembl_gene_id: azo3963
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: azo3964
symbol: azo3964
gene_biotype: protein_coding
description:
  Conserved Hypothetical protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: azo3965
symbol: azo3965
gene_biotype: protein_coding
description:
  Coproporphyrinogen oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: azo3966
symbol: azo3966
gene_biotype: protein_coding
description:
  Hypothetical protein predicted by Glimmer/Critica. No homology of the entire protein with the data bank. No domains predicted. No signal peptide. No TMHs.


ensembl_gene_id: azo3967
symbol: azo3967
gene_biotype: protein_coding
description:
  Putative protease IV. homology to sspA of E. coli of 38% (sprot|SPPA_ECOLI). Digestion of the cleaved signal peptides. This activity is necessary to maintain proper secretion of mature proteins across the membrane. InterPro: Signal peptide peptidase SppA 67K type (IPR004634); Signal peptide peptidase SppA 36K type (IPR004635); Pepditase family U7 (IPR002142) Pfam: Peptidase family U7 Tigrfam: SppA_67K: signal peptide peptidase SppA; sppA_dom: signal peptide peptidase SppA no signal peptide probable 1 TMH; High confidence in function and specificity.


ensembl_gene_id: azo3968
symbol: trmB
gene_biotype: protein_coding
description:
  Conserved hypothetical tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: azo3969
symbol: thiG
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: azo3970
symbol: thiS
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Putative sulfur transfer protein involved in thimanin biosynsthesis; High confidence in function and specificity.


ensembl_gene_id: azo3971
symbol: metX
gene_biotype: protein_coding
description:
  Probable homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.


ensembl_gene_id: azo3972
symbol: metW
gene_biotype: protein_coding
description:
  Putative methionine biosynthesis protein; Q8YDE4:20% identity, 37% similarity. Ubiquinone/menaquinone biosynthesis methyltransferase ubiE. Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-14-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-14-benzoquinol (DMQH2) (By similarity). METHIONINE BIOSYNTHESIS PROTEIN Pfam:PPTA(protein prenyl transferase alpha subunit), FERM domain TIGRFAM:rmJ: ribosomal RNA large subunit methylation InterPro IPR000051; SAM_bind. IPR004034; Ubi/men_Metransf. I [...]


ensembl_gene_id: azo3973
symbol: azo3973
gene_biotype: protein_coding
description:
  Hypothetical protein. no homology of the entire protein to the data bank. Pfam: putative peptidoglycan binding domain. This domain, peptidoglycan binding domain 1, may have a general peptidoglycan binding function. It is composed of three alpha helices and is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. no signal peptide. no TMHs.


ensembl_gene_id: azo3974
symbol: azo3974
gene_biotype: protein_coding
description:
  Conserved hypothetical protein. Homology to bb4936 of B. bronchiseptica of 36% (trembl|Q7WDQ2). no domains predicted. no signal peptide. no TMHs.


ensembl_gene_id: azo3975
symbol: ampG
gene_biotype: protein_coding
description:
  AmpG protein. Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling.Belong to the BT1 family of proteins. Presence of DUF domains and signail peptide. 11 tranmembrane helices.36% identity and 50% similarity to E.coli AmpG protein.(JW0423) 2A0125: AmpG-related permease; Family membership.


ensembl_gene_id: azo3976
symbol: azo3976
gene_biotype: protein_coding
description:
  Probable uracil-DNA glycosylase. Has PF03167,Uracil DNA glycosylase superfamily;IPR005122 UDNA_glycsylseSF; Uracil-DNA glycosylase is a DNA repair enzyme that excises uracil residues from DNA by cleaving the N-glycosylic bond. Uracil in DNA can arise as a result of misincorportation of dUMP residues by DNA polymerase or deamination of cytosine. The sequence of uracil-DNA glycosylase is extremely well conserved.


ensembl_gene_id: azo3977
symbol: azo3977
gene_biotype: protein_coding
description:
  Putative carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: azo3978
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N' (Replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: azo3979
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: azo3980
symbol: trkH2
gene_biotype: protein_coding
description:
  Putative potassium system uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: azo3981
symbol: trkA2
gene_biotype: protein_coding
description:
  Potassium uptake protein TrkA. Part of the constitutive potassium transport systems trkG and trkH. May regulate the transport activity of trkG and trkH systems. Binds to NAD+ and NADH.Peripherally bound to the inner side of the inner membrane via the trkG and trkH proteins. 51% NAD_BS.IPR006036; TrkA_Kuptake.IPR003148; TrkA_N. IPR006037; TrkAC. Pfam:PF02080; TrkA-C; 2.PF02254; TrkA-N; 2; High confidence in function and specificity.


ensembl_gene_id: azo3984
symbol: azo3984
gene_biotype: protein_coding
description:
  Conserved hypothetical secreted protein. Homology to RS02253 of R.solanacearum of 32% (trembl|Q8Y3A4(SRS)). No domains predicted. No TMHs. Signal peptide present; Conserved hypothetical protein.


ensembl_gene_id: azo3986
symbol: speE2
gene_biotype: protein_coding
description:
  Probable spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: azo3987
symbol: azo3987
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein. TREMBL:Q88FZ3: 44% identity, 60% similarity InterPro:IPR002781; DUF81.This domain is found in integral membrane proteins of prokaryotes which are uncharacterized Pfam:PF01925; DUF81 Signal peptide present and presence of 6 transmembrane helices; Conserved hypothetical protein.


ensembl_gene_id: azo3988
symbol: thdF
gene_biotype: protein_coding
description:
  Probable tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: azo3989
symbol: yidC
gene_biotype: protein_coding
description:
  Propable 60 Kd inner-membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: azo3990
symbol: azo3990
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: azo3991
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: azo3992
symbol: rpmH
gene_biotype: protein_coding
description:
  Putative Ribosomal protein L34. Has PF00468,Ribosomal protein L34;IPR000271, Ribosomal_L34;Ribosomes are the particles that catalyze mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRN [...]


# pathwayInfo

id: CL:100
description: Ribosomal protein, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:100_Ribosomal_protein,_and_Translational_elongation


id: CL:1005
description: Mixed, incl. Copper ion transport, and Cytidylyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1005_Mixed,_incl._Copper_ion_transport,_and_Cytidylyltransferase_family


id: CL:1018
description: Gram-negative-bacterium-type cell outer membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1018_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: CL:1029
description: Mixed, incl. Cobalt ion binding, and Protein stabilization
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1029_Mixed,_incl._Cobalt_ion_binding,_and_Protein_stabilization


id: CL:1043
description: Isoprene biosynthesis, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1043_Isoprene_biosynthesis,_and_Polyprenyl_synthetase


id: CL:1057
description: Polyprenyl synthetase, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1057_Polyprenyl_synthetase,_and_DNA_catabolic_process


id: CL:1072
description: Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1072_Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:1073
description: Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1073_Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:1074
description: Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1074_Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:1075
description: Amino-acid biosynthesis, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1075_Amino-acid_biosynthesis,_and_Glutamate_metabolic_process


id: CL:1076
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1076_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:1077
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1077_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:1078
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1078_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:1079
description: Arginine metabolic process, and Proline metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1079_Arginine_metabolic_process,_and_Proline_metabolic_process


id: CL:1127
description: Glutamate biosynthetic process, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1127_Glutamate_biosynthetic_process,_and_HI0933-like_protein


id: CL:1143
description: Diaminopimelate biosynthesis, and Methyltransferase HemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1143_Diaminopimelate_biosynthesis,_and_Methyltransferase_HemK-like


id: CL:1153
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1153_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1155
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1155_Aromatic_amino_acid_family_biosynthetic_process


id: CL:121
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:121_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1214
description: Ribonucleoside monophosphate metabolic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1214_Ribonucleoside_monophosphate_metabolic_process,_and_Glycine_metabolic_process


id: CL:1215
description: Mixed, incl. Pyrimidine ribonucleotide metabolic process, and GMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1215_Mixed,_incl._Pyrimidine_ribonucleotide_metabolic_process,_and_GMP_biosynthetic_process


id: CL:1217
description: Mixed, incl. GMP biosynthetic process, and AMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1217_Mixed,_incl._GMP_biosynthetic_process,_and_AMP_metabolic_process


id: CL:1220
description: GMP biosynthesis, and AMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1220_GMP_biosynthesis,_and_AMP_metabolic_process


id: CL:1246
description: UMP biosynthetic process, and Dihydroorotase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1246_UMP_biosynthetic_process,_and_Dihydroorotase_activity


id: CL:1266
description: De novo IMP biosynthetic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1266_De_novo_IMP_biosynthetic_process,_and_Glycine_metabolic_process


id: CL:1289
description: Glycine catabolic process, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1289_Glycine_catabolic_process,_and_Formyl_transferase


id: CL:1308
description: Sulfur amino acid metabolic process, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1308_Sulfur_amino_acid_metabolic_process,_and_L-serine_biosynthetic_process


id: CL:1309
description: Sulfur amino acid metabolic process, and Methionine biosynthesis protein MetW
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1309_Sulfur_amino_acid_metabolic_process,_and_Methionine_biosynthesis_protein_MetW


id: CL:1312
description: Mixed, incl. Cys/Met metabolism, pyridoxal phosphate-dependent enzyme, and Pterin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1312_Mixed,_incl._Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme,_and_Pterin-binding_domain


id: CL:1331
description: Cysteine biosynthetic process from serine
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1331_Cysteine_biosynthetic_process_from_serine


id: CL:1342
description: L-serine biosynthetic process, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1342_L-serine_biosynthetic_process,_and_Threonine_biosynthesis


id: CL:1362
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1362_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Riboflavin_metabolic_process


id: CL:1363
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1363_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Riboflavin_metabolic_process


id: CL:1364
description: Mixed, incl. Riboflavin metabolic process, and Pantothenate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1364_Mixed,_incl._Riboflavin_metabolic_process,_and_Pantothenate_biosynthetic_process


id: CL:1366
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1366_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1388
description: Pantothenate biosynthetic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1388_Pantothenate_biosynthetic_process,_and_Coenzyme_A_biosynthesis


id: CL:1403
description: Pyridine nucleotide biosynthetic process, and NAD(P)+ transhydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1403_Pyridine_nucleotide_biosynthetic_process,_and_NAD(P)+_transhydrogenase_activity


id: CL:1404
description: NAD(P)+ transhydrogenase activity, and Nicotinamide nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1404_NAD(P)+_transhydrogenase_activity,_and_Nicotinamide_nucleotide_biosynthetic_process


id: CL:1426
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1426_Mixed,_incl._Nucleoside-triphosphate_diphosphatase_activity,_and_Hydrolase_activity,_hydrolyzing_N-glycosyl_compounds

description:
  Mixed, incl. Nucleoside-triphosphate diphosphatase activity, and Hydrolase activity, hydrolyzing N-glycosyl compounds


id: CL:1429
description: Mixed, incl. Peptide deformylase, and Negative regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1429_Mixed,_incl._Peptide_deformylase,_and_Negative_regulation_of_translation


id: CL:1442
description: Nucleoside-triphosphate diphosphatase activity, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1442_Nucleoside-triphosphate_diphosphatase_activity,_and_MPN_domain


id: CL:1451
description: Mixed, incl. Cellular metabolic compound salvage, and Polyamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1451_Mixed,_incl._Cellular_metabolic_compound_salvage,_and_Polyamine_biosynthesis


id: CL:1452
description: Mostly uncharacterized, incl. Ami_2, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1452_Mostly_uncharacterized,_incl._Ami_2,_and_Amino_acid_salvage


id: CL:1453
description: Mixed, incl. Amino acid salvage, and Cys/Met metabolism PLP-dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1453_Mixed,_incl._Amino_acid_salvage,_and_Cys/Met_metabolism_PLP-dependent_enzyme


id: CL:1464
description: Mixed, incl. Ami_2, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1464_Mixed,_incl._Ami_2,_and_ABC-type_transporter_activity


id: CL:1474
description: Polyamine biosynthesis, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1474_Polyamine_biosynthesis,_and_Phosphorylase_superfamily


id: CL:1487
description: Mixed, incl. TatD related DNase, and Endomembrane system
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1487_Mixed,_incl._TatD_related_DNase,_and_Endomembrane_system


id: CL:1507
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1507_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_tRNA_threonylcarbamoyladenosine_modification

description:
  Mixed, incl. Thiamine diphosphate metabolic process, and tRNA threonylcarbamoyladenosine modification


id: CL:1508
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1508_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_Ubiquitin-like_modifier_activating_enzyme_activity

description:
  Mixed, incl. Thiamine diphosphate metabolic process, and Ubiquitin-like modifier activating enzyme activity


id: CL:1511
description: Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1511_Thiamine_diphosphate_metabolic_process


id: CL:1530
description: Mixed, incl. Tail specific protease, and Glutathione disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1530_Mixed,_incl._Tail_specific_protease,_and_Glutathione_disulfide_oxidoreductase_activity


id: CL:1542
description: tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1542_tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:1558
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1558_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Cytochrome_complex_assembly

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Cytochrome complex assembly


id: CL:1559
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1559_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Cellular_oxidant_detoxification

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Cellular oxidant detoxification


id: CL:156
description: K Homology domain, type 2, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:156_K_Homology_domain,_type_2,_and_Small_ribosomal_subunit


id: CL:1561
description: Oxidoreductase activity, acting on a sulfur group of donors, and Cellular oxidant detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1561_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Cellular_oxidant_detoxification


id: CL:1562
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1562_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Reactive_oxygen_species_metabolic_process

description:
  Oxidoreductase activity, acting on a sulfur group of donors, and Reactive oxygen species metabolic process


id: CL:1563
description: Reactive oxygen species metabolic process, and Disulfide bond
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1563_Reactive_oxygen_species_metabolic_process,_and_Disulfide_bond


id: CL:1566
description: Response to reactive oxygen species, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1566_Response_to_reactive_oxygen_species,_and_Thioredoxin


id: CL:1584
description: Reactive oxygen species metabolic process, and Thioredoxin peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1584_Reactive_oxygen_species_metabolic_process,_and_Thioredoxin_peroxidase_activity


id: CL:1596
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1596_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin-like_fold

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin-like fold


id: CL:1611
description: Glutathione peroxidase, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1611_Glutathione_peroxidase,_and_Glutathione_metabolic_process


id: CL:1623
description: Aminopeptidase, and RimK-like ATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1623_Aminopeptidase,_and_RimK-like_ATP-grasp_domain


id: CL:1637
description: Mixed, incl. Predicted integral membrane protein DUF2189, and Glutaredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1637_Mixed,_incl._Predicted_integral_membrane_protein_DUF2189,_and_Glutaredoxin


id: CL:1669
description: Mixed, incl. Ubiquinone biosynthesis, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1669_Mixed,_incl._Ubiquinone_biosynthesis,_and_Biotin_metabolic_process


id: CL:1670
description: Mixed, incl. Ubiquinone biosynthesis, and Ubiquinone biosynthesis hydroxylase UbiH/COQ6
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1670_Mixed,_incl._Ubiquinone_biosynthesis,_and_Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6


id: CL:1671
description: Mixed, incl. Ubiquinone biosynthesis, and Ubiquinone biosynthesis hydroxylase UbiH/COQ6
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1671_Mixed,_incl._Ubiquinone_biosynthesis,_and_Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6


id: CL:1689
description: Mixed, incl. Peptidase M24, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1689_Mixed,_incl._Peptidase_M24,_and_Nucleotidyl_transferase


id: CL:1698
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1698_Mixed,_incl._Ubiquinone_biosynthesis,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor

description:
  Mixed, incl. Ubiquinone biosynthesis, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor


id: CL:1712
description: Biotin metabolic process, and Peptidase M14, carboxypeptidase A
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1712_Biotin_metabolic_process,_and_Peptidase_M14,_carboxypeptidase_A


id: CL:1736
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1736_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_segregation


id: CL:1737
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1737_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_partition


id: CL:1740
description: Mixed, incl. PHP domain, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1740_Mixed,_incl._PHP_domain,_and_Telomere_recombination


id: CL:1761
description: Mixed, incl. (Uracil-5)-methyltransferase family, and 2-oxoglutarate-dependent dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1761_Mixed,_incl._(Uracil-5)-methyltransferase_family,_and_2-oxoglutarate-dependent_dioxygenase_activity


id: CL:1776
description: Mixed, incl. Phosphoglycolate phosphatase-like, domain 2, and Macro domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1776_Mixed,_incl._Phosphoglycolate_phosphatase-like,_domain_2,_and_Macro_domain


id: CL:1777
description: Mixed, incl. Phosphoglycolate phosphatase-like, domain 2, and Peptidase S49
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1777_Mixed,_incl._Phosphoglycolate_phosphatase-like,_domain_2,_and_Peptidase_S49


id: CL:1790
description: Mixed, incl. Macro domain, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1790_Mixed,_incl._Macro_domain,_and_WYL_domain


id: CL:1808
description: Mixed, incl. Potassium ion transport, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1808_Mixed,_incl._Potassium_ion_transport,_and_Regulation_of_cell_cycle


id: CL:1810
description: Mixed, incl. Antiport, and Regulation of metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1810_Mixed,_incl._Antiport,_and_Regulation_of_metal_ion_transport


id: CL:1812
description: Potassium ion transport, and Endoribonuclease L-PSP
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1812_Potassium_ion_transport,_and_Endoribonuclease_L-PSP


id: CL:1842
description: Mixed, incl. Regulation of cell cycle, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1842_Mixed,_incl._Regulation_of_cell_cycle,_and_ArsC_family


id: CL:1845
description: Mixed, incl. Regulation of cell cycle, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1845_Mixed,_incl._Regulation_of_cell_cycle,_and_ArsC_family


id: CL:1865
description: Mixed, incl. Queuosine metabolic process, and Carbonate dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1865_Mixed,_incl._Queuosine_metabolic_process,_and_Carbonate_dehydratase_activity


id: CL:1866
description: Queuosine metabolic process, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1866_Queuosine_metabolic_process,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:1885
description: Putative zinc- or iron-chelating domain, and SEC-C motif
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1885_Putative_zinc-_or_iron-chelating_domain,_and_SEC-C_motif


id: CL:1898
description: Mixed, incl. NlpC/P60 family, and Phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1898_Mixed,_incl._NlpC/P60_family,_and_Phosphate_transporter


id: CL:1917
description: Inositol monophosphatase, conserved site, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1917_Inositol_monophosphatase,_conserved_site,_and_SpoU_rRNA_Methylase_family


id: CL:1941
description: Carbon metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1941_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1942
description: Carbon metabolism, and Aldehyde dehydrogenase, glutamic acid active site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1942_Carbon_metabolism,_and_Aldehyde_dehydrogenase,_glutamic_acid_active_site


id: CL:1943
description: Carbon metabolism, and Aldehyde dehydrogenase, glutamic acid active site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1943_Carbon_metabolism,_and_Aldehyde_dehydrogenase,_glutamic_acid_active_site


id: CL:1944
description: Citrate cycle (TCA cycle), and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1944_Citrate_cycle_(TCA_cycle),_and_Glycolytic_process


id: CL:1950
description: Succinate dehydrogenase activity, and CoA-ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1950_Succinate_dehydrogenase_activity,_and_CoA-ligase


id: CL:1961
description: Tricarboxylic acid cycle, and Malic enzyme, NAD-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1961_Tricarboxylic_acid_cycle,_and_Malic_enzyme,_NAD-binding


id: CL:1980
description: Dehydrogenase, E1 component, and e3 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1980_Dehydrogenase,_E1_component,_and_e3_binding_domain


id: CL:1994
description: Acetoin metabolic process, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:1994_Acetoin_metabolic_process,_and_Protein_lipoylation


id: CL:2008
description: Glycolytic process, and Pentose-phosphate shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2008_Glycolytic_process,_and_Pentose-phosphate_shunt


id: CL:2010
description: Glycolysis, and Transketolase binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2010_Glycolysis,_and_Transketolase_binding_site


id: CL:202
description: Mixed, incl. Ribosomal large subunit assembly, and Translation protein SH3-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:202_Mixed,_incl._Ribosomal_large_subunit_assembly,_and_Translation_protein_SH3-like_domain_superfamily


id: CL:2042
description: Aldehyde dehydrogenase, glutamic acid active site, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2042_Aldehyde_dehydrogenase,_glutamic_acid_active_site,_and_Propanoate_metabolism


id: CL:2044
description: Mixed, incl. acetyl-CoA biosynthetic process, and Aldehyde dehydrogenase, glutamic acid active site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2044_Mixed,_incl._acetyl-CoA_biosynthetic_process,_and_Aldehyde_dehydrogenase,_glutamic_acid_active_site


id: CL:2047
description: acetyl-CoA biosynthetic process, and CoA-transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2047_acetyl-CoA_biosynthetic_process,_and_CoA-transferase_activity


id: CL:2061
description: Acrylyl-CoA reductase AcuI, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2061_Acrylyl-CoA_reductase_AcuI,_and_Biotin-binding_site


id: CL:2079
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2079_Methylmalonyl-CoA_mutase,_and_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_pyrimidine_binding_domain

description:
  Methylmalonyl-CoA mutase, and Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain


id: CL:2094
description: Lactate metabolic process, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2094_Lactate_metabolic_process,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:2096
description: Mixed, incl. FAD-linked oxidase, C-terminal, and LUD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2096_Mixed,_incl._FAD-linked_oxidase,_C-terminal,_and_LUD_domain


id: CL:2097
description: Mixed, incl. FAD-linked oxidase, C-terminal, and Pyruvate kinase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2097_Mixed,_incl._FAD-linked_oxidase,_C-terminal,_and_Pyruvate_kinase-like_domain_superfamily


id: CL:2099
description: FAD-linked oxidase, C-terminal, and ICL/PEPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2099_FAD-linked_oxidase,_C-terminal,_and_ICL/PEPM_domain


id: CL:2119
description: LUD domain, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2119_LUD_domain,_and_Cysteine-rich_domain


id: CL:213
description: Zinc-binding ribosomal protein, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:213_Zinc-binding_ribosomal_protein,_and_L28p-like


id: CL:2132
description: 3-hydroxyisobutyrate dehydrogenase-related, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2132_3-hydroxyisobutyrate_dehydrogenase-related,_and_Xylose_isomerase-like_TIM_barrel


id: CL:2141
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2141_Valine,_leucine_and_isoleucine_biosynthesis,_and_Biosynthesis_of_various_secondary_metabolites_-_part_2

description:
  Valine, leucine and isoleucine biosynthesis, and Biosynthesis of various secondary metabolites - part 2


id: CL:2143
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2143_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:2144
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2144_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:2146
description: Acetolactate synthase activity, and Isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2146_Acetolactate_synthase_activity,_and_Isoleucine_biosynthesis


id: CL:2167
description: L-valine transaminase activity, and 2-isopropylmalate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2167_L-valine_transaminase_activity,_and_2-isopropylmalate_synthase_activity


id: CL:2179
description: Biosynthesis of various secondary metabolites - part 2, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2179_Biosynthesis_of_various_secondary_metabolites_-_part_2,_and_Glycosyl_transferase_family_2


id: CL:2188
description: Mixed, incl. Fatty acid metabolic process, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2188_Mixed,_incl._Fatty_acid_metabolic_process,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:2190
description: Mixed, incl. Fatty acid metabolic process, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2190_Mixed,_incl._Fatty_acid_metabolic_process,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:2192
description: Valine, leucine and isoleucine degradation, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2192_Valine,_leucine_and_isoleucine_degradation,_and_Fatty_acid_metabolic_process


id: CL:2193
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2193_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Electron_transfer_flavoprotein_domain


id: CL:2194
description: Valine, leucine and isoleucine degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2194_Valine,_leucine_and_isoleucine_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:2196
description: Valine, leucine and isoleucine degradation, and 3-hydroxyacyl-CoA dehydrogenase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2196_Valine,_leucine_and_isoleucine_degradation,_and_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal


id: CL:2198
description: Fatty acid degradation, and enoyl-CoA hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2198_Fatty_acid_degradation,_and_enoyl-CoA_hydratase_activity


id: CL:2200
description: Thiolase, C-terminal, and 3-hydroxyacyl-CoA dehydrogenase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2200_Thiolase,_C-terminal,_and_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal


id: CL:2204
description: 3-hydroxyacyl-CoA dehydrogenase activity, and Thiolase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2204_3-hydroxyacyl-CoA_dehydrogenase_activity,_and_Thiolase,_active_site


id: CL:2238
description: CoA carboxylase activity, and Synthesis and degradation of ketone bodies
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2238_CoA_carboxylase_activity,_and_Synthesis_and_degradation_of_ketone_bodies


id: CL:2255
description: Electron transfer flavoprotein domain, and Organelle inner membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2255_Electron_transfer_flavoprotein_domain,_and_Organelle_inner_membrane


id: CL:2257
description: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal, and Organelle inner membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2257_Electron_transfer_flavoprotein,_alpha/beta-subunit,_N-terminal,_and_Organelle_inner_membrane


id: CL:2278
description: Mixed, incl. Acyl-CoA dehydrogenase, conserved site, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2278_Mixed,_incl._Acyl-CoA_dehydrogenase,_conserved_site,_and_Thioesterase_domain


id: CL:2279
description: Mixed, incl. Acyl-CoA dehydrogenase, conserved site, and Endoribonuclease L-PSP
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2279_Mixed,_incl._Acyl-CoA_dehydrogenase,_conserved_site,_and_Endoribonuclease_L-PSP


id: CL:2290
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2290_Mixed,_incl._Transcription_regulators_MarR/SlyA-like,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Mixed, incl. Transcription regulators MarR/SlyA-like, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:2307
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, and Shikimate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2307_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_and_Shikimate_kinase


id: CL:2311
description: Mixed, incl. Shikimate kinase, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2311_Mixed,_incl._Shikimate_kinase,_and_4Fe-4S_dicluster_domain


id: CL:2323
description: Mixed, incl. Thiolase, N-terminal domain, and Enoyl-CoA hydratase/isomerase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2323_Mixed,_incl._Thiolase,_N-terminal_domain,_and_Enoyl-CoA_hydratase/isomerase,_conserved_site


id: CL:2341
description: AMP-binding, conserved site, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2341_AMP-binding,_conserved_site,_and_Nucleotide_excision_repair


id: CL:2343
description: AMP-binding, conserved site, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2343_AMP-binding,_conserved_site,_and_Phosphopantetheine


id: CL:2368
description: Mixed, incl. Fatty acid biosynthesis, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2368_Mixed,_incl._Fatty_acid_biosynthesis,_and_Nitronate_monooxygenase


id: CL:2369
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2369_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:2370
description: Mixed, incl. Fatty acid biosynthesis, and Molecular adaptor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2370_Mixed,_incl._Fatty_acid_biosynthesis,_and_Molecular_adaptor_activity


id: CL:2371
description: Mixed, incl. Fatty acid biosynthesis, and Outer membrane lipoprotein carrier protein LolA
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2371_Mixed,_incl._Fatty_acid_biosynthesis,_and_Outer_membrane_lipoprotein_carrier_protein_LolA


id: CL:2372
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2372_Mixed,_incl._3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity,_and_Outer_membrane_lipoprotein_carrier_protein_LolA

description:
  Mixed, incl. 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity, and Outer membrane lipoprotein carrier protein LolA


id: CL:2376
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2376_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity,_and_Outer_membrane_lipoprotein_carrier_protein_LolA

description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity, and Outer membrane lipoprotein carrier protein LolA


id: CL:2393
description: Beta-ketoacyl synthase, N-terminal, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2393_Beta-ketoacyl_synthase,_N-terminal,_and_Cation/H+_exchanger


id: CL:2402
description: Molecular adaptor activity, and Tryptophan halogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2402_Molecular_adaptor_activity,_and_Tryptophan_halogenase


id: CL:241
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:241_RNA_polymerase,_and_Transcription_termination


id: CL:2411
description: Mixed, incl. 3-oxoacyl-[acyl-carrier-protein] synthase activity, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2411_Mixed,_incl._3-oxoacyl-[acyl-carrier-protein]_synthase_activity,_and_Regulation_of_growth


id: CL:2415
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2415_Mixed,_incl._ABC-2_family_transporter_protein,_and_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity

description:
  Mixed, incl. ABC-2 family transporter protein, and Beta-ketoacyl-acyl-carrier-protein synthase III activity


id: CL:2434
description: Fatty acid biosynthesis, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2434_Fatty_acid_biosynthesis,_and_Nitronate_monooxygenase


id: CL:2461
description: Mixed, incl. Degradation of aromatic compounds, and Aromatic compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2461_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Aromatic_compound_catabolic_process


id: CL:2462
description: Mixed, incl. Degradation of aromatic compounds, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2462_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Monooxygenase


id: CL:2463
description: Degradation of aromatic compounds, and 2Fe-2S ferredoxin, iron-sulphur binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2463_Degradation_of_aromatic_compounds,_and_2Fe-2S_ferredoxin,_iron-sulphur_binding_site


id: CL:2465
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2465_Mixed,_incl._Chlorocyclohexane_and_chlorobenzene_degradation,_and_2Fe-2S_ferredoxin,_iron-sulphur_binding_site

description:
  Mixed, incl. Chlorocyclohexane and chlorobenzene degradation, and 2Fe-2S ferredoxin, iron-sulphur binding site


id: CL:2466
description: Chlorocyclohexane and chlorobenzene degradation, and 2Fe-2S ferredoxin, iron-sulphur binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2466_Chlorocyclohexane_and_chlorobenzene_degradation,_and_2Fe-2S_ferredoxin,_iron-sulphur_binding_site


id: CL:2468
description: Toluene degradation, and Catechol 2,3 dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2468_Toluene_degradation,_and_Catechol_2,3_dioxygenase


id: CL:2504
description: Oxidoreductase FAD/NAD(P)-binding, and Methane/Phenol/Toluene Hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2504_Oxidoreductase_FAD/NAD(P)-binding,_and_Methane/Phenol/Toluene_Hydroxylase


id: CL:2507
description: Oxidoreductase FAD/NAD(P)-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2507_Oxidoreductase_FAD/NAD(P)-binding


id: CL:2527
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2527_Rieske-like_[2Fe-2S]_domain,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor

description:
  Rieske-like [2Fe-2S] domain, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor


id: CL:2541
description: Dioxin degradation, and 3-phenylpropionate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2541_Dioxin_degradation,_and_3-phenylpropionate_metabolic_process


id: CL:2542
description: Dioxin degradation, and Memo-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2542_Dioxin_degradation,_and_Memo-like_protein


id: CL:2543
description: Aromatic hydrocarbons catabolism, and 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2543_Aromatic_hydrocarbons_catabolism,_and_2-hydroxy-6-oxonona-2,4-dienedioate_hydrolase_activity


id: CL:2552
description: 2-oxopent-4-enoate hydratase activity, and Acetaldehyde dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2552_2-oxopent-4-enoate_hydratase_activity,_and_Acetaldehyde_dehydrogenase


id: CL:2572
description: Mixed, incl. AraC-binding-like domain, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2572_Mixed,_incl._AraC-binding-like_domain,_and_Flavin_reductase_like_domain


id: CL:2574
description: Mixed, incl. AraC-binding-like domain, and Pyrimidine nucleobase catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2574_Mixed,_incl._AraC-binding-like_domain,_and_Pyrimidine_nucleobase_catabolic_process


id: CL:2575
description: Mixed, incl. AraC-binding-like domain, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2575_Mixed,_incl._AraC-binding-like_domain,_and_Putative_cyclase


id: CL:2576
description: Mixed, incl. Putative cyclase, and Ring hydroxylating beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2576_Mixed,_incl._Putative_cyclase,_and_Ring_hydroxylating_beta_subunit


id: CL:2578
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2578_Mixed,_incl._Putative_cyclase,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Mixed, incl. Putative cyclase, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: CL:2581
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2581_Mixed,_incl._Ring_hydroxylating_beta_subunit,_and_Aromatic-ring-hydroxylating_dioxygenase,_alpha_subunit

description:
  Mixed, incl. Ring hydroxylating beta subunit, and Aromatic-ring-hydroxylating dioxygenase, alpha subunit


id: CL:2598
description: Mixed, incl. Ring hydroxylating beta subunit, and Isochorismatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2598_Mixed,_incl._Ring_hydroxylating_beta_subunit,_and_Isochorismatase-like


id: CL:2607
description: AraC-binding-like domain, and Transcription regulators MarR/SlyA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2607_AraC-binding-like_domain,_and_Transcription_regulators_MarR/SlyA-like


id: CL:2616
description: Pyrimidine nucleobase catabolic process, and AraC-binding-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2616_Pyrimidine_nucleobase_catabolic_process,_and_AraC-binding-like_domain


id: CL:2626
description: Mixed, incl. Steroid degradation, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2626_Mixed,_incl._Steroid_degradation,_and_Nitroreductase


id: CL:2627
description: Mixed, incl. Styrene monooxygenase StyA, putative substrate binding domain, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2627_Mixed,_incl._Styrene_monooxygenase_StyA,_putative_substrate_binding_domain,_and_Steroid_degradation


id: CL:2638
description: Nitroreductase, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2638_Nitroreductase,_and_Steroid_degradation


id: CL:2649
description: Mixed, incl. Phenylacetate catabolic process, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2649_Mixed,_incl._Phenylacetate_catabolic_process,_and_Tyrosine_metabolism


id: CL:2650
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2650_Mixed,_incl._Phenylacetate_catabolic_process,_and_HTH-type_transcriptional_repressor_KstR2,_C-terminal

description:
  Mixed, incl. Phenylacetate catabolic process, and HTH-type transcriptional repressor KstR2, C-terminal


id: CL:2655
description: Phenylacetic acid catabolic protein, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2655_Phenylacetic_acid_catabolic_protein,_and_MIP18_family-like


id: CL:2675
description: Tyrosine metabolism, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2675_Tyrosine_metabolism,_and_FAD-binding_domain


id: CL:2677
description: Mixed, incl. Bacterial transcriptional regulator, and L-methylmalonyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2677_Mixed,_incl._Bacterial_transcriptional_regulator,_and_L-methylmalonyl-CoA_metabolic_process


id: CL:2691
description: Mixed, incl. Amino acid salvage, and Glutathione S-transferases, class Zeta
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2691_Mixed,_incl._Amino_acid_salvage,_and_Glutathione_S-transferases,_class_Zeta


id: CL:2700
description: Mixed, incl. Transcription regulator HTH, GntR, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2700_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_Cyclophilin-like_domain_superfamily


id: CL:2702
description: Mixed, incl. Cyclophilin-like domain superfamily, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2702_Mixed,_incl._Cyclophilin-like_domain_superfamily,_and_Bacterial_transcriptional_regulator


id: CL:2727
description: Mixed, incl. Poly-hydroxybutyrate metabolic process, and Acetoacetyl-CoA reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2727_Mixed,_incl._Poly-hydroxybutyrate_metabolic_process,_and_Acetoacetyl-CoA_reductase


id: CL:2729
description: Poly-hydroxybutyrate metabolic process, and Acetoacetyl-CoA reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2729_Poly-hydroxybutyrate_metabolic_process,_and_Acetoacetyl-CoA_reductase


id: CL:2732
description: Poly-beta-hydroxybutyrate polymerase, N-terminal domain, and Acetoacetyl-CoA reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2732_Poly-beta-hydroxybutyrate_polymerase,_N-terminal_domain,_and_Acetoacetyl-CoA_reductase


id: CL:2755
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2755_Mixed,_incl._Transcription_elongation_factor_GreA/GreB,_and_Predicted_integral_membrane_protein_DUF2189

description:
  Mixed, incl. Transcription elongation factor GreA/GreB, and Predicted integral membrane protein DUF2189


id: CL:2771
description: Mixed, incl. Oxidative phosphorylation, and Iron
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2771_Mixed,_incl._Oxidative_phosphorylation,_and_Iron


id: CL:2772
description: Mixed, incl. Oxidative phosphorylation, and Iron
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2772_Mixed,_incl._Oxidative_phosphorylation,_and_Iron


id: CL:2773
description: Mixed, incl. Oxidative phosphorylation, and Iron
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2773_Mixed,_incl._Oxidative_phosphorylation,_and_Iron


id: CL:2774
description: Mixed, incl. Oxidative phosphorylation, and Iron
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2774_Mixed,_incl._Oxidative_phosphorylation,_and_Iron


id: CL:2775
description: Mixed, incl. Oxidative phosphorylation, and Molybdopterin dinucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2775_Mixed,_incl._Oxidative_phosphorylation,_and_Molybdopterin_dinucleotide-binding_domain


id: CL:2776
description: Mixed, incl. Oxidative phosphorylation, and Molybdopterin dinucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2776_Mixed,_incl._Oxidative_phosphorylation,_and_Molybdopterin_dinucleotide-binding_domain


id: CL:2777
description: Oxidative phosphorylation, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2777_Oxidative_phosphorylation,_and_Alpha/beta_hydrolase_fold


id: CL:2780
description: Mixed, incl. Ubiquinone, and Ubiquinol-cytochrome-c reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2780_Mixed,_incl._Ubiquinone,_and_Ubiquinol-cytochrome-c_reductase_activity


id: CL:2783
description: Ubiquinone, and Ubiquinol-cytochrome-c reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2783_Ubiquinone,_and_Ubiquinol-cytochrome-c_reductase_activity


id: CL:2785
description: Quinone, and Plasma membrane respiratory chain complex I
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2785_Quinone,_and_Plasma_membrane_respiratory_chain_complex_I


id: CL:2814
description: Mixed, incl. RmlD substrate binding domain, and NADH-ubiquinone oxidoreductase, 20 Kd subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2814_Mixed,_incl._RmlD_substrate_binding_domain,_and_NADH-ubiquinone_oxidoreductase,_20_Kd_subunit


id: CL:2826
description: Ubiquinol-cytochrome-c reductase activity, and Double Cache domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2826_Ubiquinol-cytochrome-c_reductase_activity,_and_Double_Cache_domain_2


id: CL:2851
description: Mixed, incl. Cytochrome-c oxidase activity, and Cytochrome C oxidase, cbb3-type, subunit III
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2851_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Cytochrome_C_oxidase,_cbb3-type,_subunit_III


id: CL:2853
description: Mixed, incl. Cytochrome-c oxidase activity, and UbiA prenyltransferase conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2853_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_UbiA_prenyltransferase_conserved_site


id: CL:2857
description: Copper, and Cytochrome c oxidase subunit III-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2857_Copper,_and_Cytochrome_c_oxidase_subunit_III-like


id: CL:2882
description: Cytochrome-c oxidase activity, and Copper ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2882_Cytochrome-c_oxidase_activity,_and_Copper_ion_transport


id: CL:2892
description: Mixed, incl. Anaerobic respiration, and NapD protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2892_Mixed,_incl._Anaerobic_respiration,_and_NapD_protein


id: CL:2893
description: Mixed, incl. Multiheme cytochrome superfamily, and NapD protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2893_Mixed,_incl._Multiheme_cytochrome_superfamily,_and_NapD_protein


id: CL:2895
description: Multiheme cytochrome superfamily, and Nitrate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2895_Multiheme_cytochrome_superfamily,_and_Nitrate_reductase_activity


id: CL:2907
description: Multiheme cytochrome superfamily, and NapD protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2907_Multiheme_cytochrome_superfamily,_and_NapD_protein


id: CL:2916
description: Anaerobic respiration, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2916_Anaerobic_respiration,_and_4Fe-4S_dicluster_domain


id: CL:2926
description: Mixed, incl. FixG, C-terminal immunoglobulin-like domain, and Radical SAM, alpha/beta horseshoe
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2926_Mixed,_incl._FixG,_C-terminal_immunoglobulin-like_domain,_and_Radical_SAM,_alpha/beta_horseshoe


id: CL:2928
description: Mixed, incl. FixG, C-terminal immunoglobulin-like domain, and Respiratory chain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2928_Mixed,_incl._FixG,_C-terminal_immunoglobulin-like_domain,_and_Respiratory_chain


id: CL:2931
description: Respiratory chain, and FixG, C-terminal immunoglobulin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2931_Respiratory_chain,_and_FixG,_C-terminal_immunoglobulin-like_domain


id: CL:2954
description: Radical SAM, alpha/beta horseshoe, and 4-vinyl reductase, 4VR
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2954_Radical_SAM,_alpha/beta_horseshoe,_and_4-vinyl_reductase,_4VR


id: CL:2968
description: Mixed, incl. Cytochrome c, and Ig-like SoxY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2968_Mixed,_incl._Cytochrome_c,_and_Ig-like_SoxY_domain


id: CL:2969
description: Mixed, incl. Ig-like SoxY domain, and Phenylacetate-CoA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2969_Mixed,_incl._Ig-like_SoxY_domain,_and_Phenylacetate-CoA_ligase


id: CL:297
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:297_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:2971
description: Mixed, incl. Ig-like SoxY domain, and Sulphur oxidation protein SoxZ
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2971_Mixed,_incl._Ig-like_SoxY_domain,_and_Sulphur_oxidation_protein_SoxZ


id: CL:2988
description: Cyclic-guanylate-specific phosphodiesterase activity, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2988_Cyclic-guanylate-specific_phosphodiesterase_activity,_and_Cytochrome_c


id: CL:2997
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2997_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors,_and_Tricarboxylic_acid_metabolic_process

description:
  Mixed, incl. Oxidoreductase activity, acting on CH-OH group of donors, and Tricarboxylic acid metabolic process


id: CL:2998
description: Mixed, incl. Beta-propeller repeat, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2998_Mixed,_incl._Beta-propeller_repeat,_and_Tricarboxylic_acid_metabolic_process


id: CL:2999
description: Mixed, incl. Beta-propeller repeat, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:2999_Mixed,_incl._Beta-propeller_repeat,_and_Tricarboxylic_acid_metabolic_process


id: CL:3000
description: Mixed, incl. Beta-propeller repeat, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3000_Mixed,_incl._Beta-propeller_repeat,_and_Tricarboxylic_acid_metabolic_process


id: CL:3002
description: Tricarboxylic acid metabolic process, and Beta-propeller repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3002_Tricarboxylic_acid_metabolic_process,_and_Beta-propeller_repeat


id: CL:3003
description: Tricarboxylic acid metabolic process, and Beta-propeller repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3003_Tricarboxylic_acid_metabolic_process,_and_Beta-propeller_repeat


id: CL:3016
description: PQQ-dependent dehydrogenase, methanol/ethanol family, and WD40 repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3016_PQQ-dependent_dehydrogenase,_methanol/ethanol_family,_and_WD40_repeats


id: CL:3034
description: Mixed, incl. Tryptophan halogenase, and 4Fe4S-binding SPASM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3034_Mixed,_incl._Tryptophan_halogenase,_and_4Fe4S-binding_SPASM_domain


id: CL:3055
description: Cellular response to aldehyde, and Alcohol dehydrogenase, zinc-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3055_Cellular_response_to_aldehyde,_and_Alcohol_dehydrogenase,_zinc-type,_conserved_site


id: CL:3070
description: Mixed, incl. GMC oxidoreductase, and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3070_Mixed,_incl._GMC_oxidoreductase,_and_GAF_domain


id: CL:309
description: Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:309_Class_I_and_II_aminoacyl-tRNA_synthetase,_tRNA-binding_arm,_and_tRNA-binding_domain


id: CL:3092
description: Mixed, incl. Peptidase U32, and NosL
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3092_Mixed,_incl._Peptidase_U32,_and_NosL


id: CL:3093
description: Mostly uncharacterized, incl. NosL, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3093_Mostly_uncharacterized,_incl._NosL,_and_4Fe-4S_binding_domain


id: CL:3094
description: Mixed, incl. NosL, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3094_Mixed,_incl._NosL,_and_Cytochrome_c


id: CL:3097
description: Mixed, incl. NosL, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3097_Mixed,_incl._NosL,_and_Pectin_lyase_fold


id: CL:3100
description: Mixed, incl. NosL, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3100_Mixed,_incl._NosL,_and_Pectin_lyase_fold


id: CL:3111
description: Mixed, incl. Denitrification pathway, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3111_Mixed,_incl._Denitrification_pathway,_and_Von_Willebrand_factor,_type_A


id: CL:3128
description: Mixed, incl. TusA-like domain superfamily, and Response to nitrosative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3128_Mixed,_incl._TusA-like_domain_superfamily,_and_Response_to_nitrosative_stress


id: CL:3140
description: Peptidase U32, and SCP2 sterol-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3140_Peptidase_U32,_and_SCP2_sterol-binding_domain


id: CL:3157
description: Crp-type HTH domain, and Protein of unknown function (DUF2892)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3157_Crp-type_HTH_domain,_and_Protein_of_unknown_function_(DUF2892)


id: CL:3167
description: Mixed, incl. Methylamine metabolic process, and Di-haem cytochrome c peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3167_Mixed,_incl._Methylamine_metabolic_process,_and_Di-haem_cytochrome_c_peroxidase


id: CL:3169
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3169_Methylamine_metabolic_process,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_with_a_copper_protein_as_acceptor

description:
  Methylamine metabolic process, and Oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor


id: CL:3192
description: Mixed, incl. MetI-like superfamily, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3192_Mixed,_incl._MetI-like_superfamily,_and_Amide_transport


id: CL:3193
description: Mixed, incl. FAD dependent oxidoreductase, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3193_Mixed,_incl._FAD_dependent_oxidoreductase,_and_Amide_transport


id: CL:3196
description: Mixed, incl. Amide transport, and Polyamine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3196_Mixed,_incl._Amide_transport,_and_Polyamine_catabolic_process


id: CL:3209
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3209_Mixed,_incl._2Fe-2S_iron-sulfur_cluster_binding_domain,_and_Transcription_regulator_HTH,_AsnC-type,_conserved_site

description:
  Mixed, incl. 2Fe-2S iron-sulfur cluster binding domain, and Transcription regulator HTH, AsnC-type, conserved site


id: CL:3219
description: Mixed, incl. Amide transport, and Anion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3219_Mixed,_incl._Amide_transport,_and_Anion_channel_activity


id: CL:322
description: SRP54-type protein, helical bundle domain, and Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:322_SRP54-type_protein,_helical_bundle_domain,_and_Protein-transporting_ATPase_activity


id: CL:3236
description: Mixed, incl. Rhodanese-like domain, and Phosphotyrosine protein phosphatase I
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3236_Mixed,_incl._Rhodanese-like_domain,_and_Phosphotyrosine_protein_phosphatase_I


id: CL:3237
description: Mixed, incl. Rhodanese-like domain, and Phosphotyrosine protein phosphatase I
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3237_Mixed,_incl._Rhodanese-like_domain,_and_Phosphotyrosine_protein_phosphatase_I


id: CL:3238
description: Mixed, incl. Phosphotyrosine protein phosphatase I, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3238_Mixed,_incl._Phosphotyrosine_protein_phosphatase_I,_and_Rhodanese-like_domain


id: CL:3241
description: Mixed, incl. Phosphotyrosine protein phosphatase I, and Sodium Bile acid symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3241_Mixed,_incl._Phosphotyrosine_protein_phosphatase_I,_and_Sodium_Bile_acid_symporter_family


id: CL:3260
description: Mixed, incl. RNA capping, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3260_Mixed,_incl._RNA_capping,_and_Blockage_of_phagosome_acidification


id: CL:3275
description: Mixed, incl. Methylglyoxal metabolic process, and RNase H
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3275_Mixed,_incl._Methylglyoxal_metabolic_process,_and_RNase_H


id: CL:3277
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3277_Hydroxyacylglutathione_hydrolase,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Hydroxyacylglutathione hydrolase, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:3289
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3289_Mixed,_incl._N-formylglutamate_amidohydrolase,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. N-formylglutamate amidohydrolase, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:3300
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3300_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Rhodanese_Homology_Domain


id: CL:3309
description: Mixed, incl. Nitrogen fixation, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3309_Mixed,_incl._Nitrogen_fixation,_and_Iron-sulfur_cluster_assembly


id: CL:3311
description: Mixed, incl. Nitrogen fixation, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3311_Mixed,_incl._Nitrogen_fixation,_and_Iron-sulfur_cluster_assembly


id: CL:3313
description: Mixed, incl. Nitrogen fixation, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3313_Mixed,_incl._Nitrogen_fixation,_and_Flavoprotein-like_superfamily


id: CL:3315
description: Mixed, incl. Nitrogen fixation, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3315_Mixed,_incl._Nitrogen_fixation,_and_Flavodoxin


id: CL:3316
description: Mixed, incl. Nitrogen fixation, and Chlorophyll metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3316_Mixed,_incl._Nitrogen_fixation,_and_Chlorophyll_metabolic_process


id: CL:3317
description: Nitrogen fixation, and Chlorophyll metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3317_Nitrogen_fixation,_and_Chlorophyll_metabolic_process


id: CL:3319
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3319_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Dinitrogenase_iron-molybdenum_cofactor

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Dinitrogenase iron-molybdenum cofactor


id: CL:3321
description: Carbonyl sulfide nitrogenase activity, and Chlorophyll metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3321_Carbonyl_sulfide_nitrogenase_activity,_and_Chlorophyll_metabolic_process


id: CL:3348
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3348_Mixed,_incl._2Fe-2S_ferredoxin,_iron-sulphur_binding_site,_and_Dinitrogenase_iron-molybdenum_cofactor,_N-terminal

description:
  Mixed, incl. 2Fe-2S ferredoxin, iron-sulphur binding site, and Dinitrogenase iron-molybdenum cofactor, N-terminal


id: CL:3350
description: Mixed, incl. Dinitrogenase iron-molybdenum cofactor, N-terminal, and Oxygen carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3350_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor,_N-terminal,_and_Oxygen_carrier_activity


id: CL:3373
description: Mixed, incl. ANK repeat, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3373_Mixed,_incl._ANK_repeat,_and_Nitroreductase


id: CL:3402
description: Mixed, incl. Iron-sulfur cluster assembly, and Adrenodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3402_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Adrenodoxin


id: CL:3405
description: Iron-sulfur cluster assembly, and Adrenodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3405_Iron-sulfur_cluster_assembly,_and_Adrenodoxin


id: CL:3438
description: Mixed, incl. BolA protein, and Truncated hemoglobin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3438_Mixed,_incl._BolA_protein,_and_Truncated_hemoglobin


id: CL:3455
description: Mixed, incl. Regulation of nitrogen utilization, and Ammonium Transporter Family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3455_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Ammonium_Transporter_Family


id: CL:3456
description: Mixed, incl. Regulation of nitrogen utilization, and Ammonium Transporter Family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3456_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Ammonium_Transporter_Family


id: CL:3458
description: Regulation of nitrogen utilization, and Ammonium Transporter Family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3458_Regulation_of_nitrogen_utilization,_and_Ammonium_Transporter_Family


id: CL:3460
description: Regulation of nitrogen utilization, and Ammonium Transporter Family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3460_Regulation_of_nitrogen_utilization,_and_Ammonium_Transporter_Family


id: CL:347
description: RelA/SpoT, and Ribonucleoside-diphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:347_RelA/SpoT,_and_Ribonucleoside-diphosphate_reductase_activity


id: CL:3482
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3482_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Ammonia_ligase_activity


id: CL:3498
description: Mixed, incl. Site of DNA damage, and Tyrosine-specific protein phosphatases domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3498_Mixed,_incl._Site_of_DNA_damage,_and_Tyrosine-specific_protein_phosphatases_domain


id: CL:3510
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3510_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3511
description: Mixed, incl. Carbohydrate metabolic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3511_Mixed,_incl._Carbohydrate_metabolic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:3512
description: Mixed, incl. Polysaccharide metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3512_Mixed,_incl._Polysaccharide_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3513
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3513_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_metabolic_process


id: CL:3514
description: Mixed, incl. Polysaccharide metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3514_Mixed,_incl._Polysaccharide_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3516
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3516_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:3517
description: O-Antigen nucleotide sugar biosynthesis, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3517_O-Antigen_nucleotide_sugar_biosynthesis,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:3519
description: O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3519_O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:3520
description: Polyketide sugar unit biosynthesis, and Nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3520_Polyketide_sugar_unit_biosynthesis,_and_Nucleotidyl_transferase_domain


id: CL:3522
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3522_Polyketide_sugar_unit_biosynthesis


id: CL:3541
description: UDP binding domain, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3541_UDP_binding_domain,_and_CoA-binding_domain


id: CL:3560
description: Mostly uncharacterized, incl. Cellulase activity, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3560_Mostly_uncharacterized,_incl._Cellulase_activity,_and_CoA-binding_domain


id: CL:3561
description: Mixed, incl. CoA-binding domain, and SurA N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3561_Mixed,_incl._CoA-binding_domain,_and_SurA_N-terminal_domain


id: CL:3572
description: Mixed, incl. Cellulase activity, and Acyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3572_Mixed,_incl._Cellulase_activity,_and_Acyltransferase_family


id: CL:3594
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3594_Mixed,_incl._Alanine,_aspartate_and_glutamate_metabolism,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Alanine, aspartate and glutamate metabolism, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:3596
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3596_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Polysaccharide_transport


id: CL:3597
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3597_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Polysaccharide_transport


id: CL:3599
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3599_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_NodB_homology_domain


id: CL:3602
description: Mixed, incl. Polysaccharide export protein, and Tyrosine kinase, G-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3602_Mixed,_incl._Polysaccharide_export_protein,_and_Tyrosine_kinase,_G-rich_domain


id: CL:3630
description: Serine aminopeptidase, S33, and Enterobacterial common antigen metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3630_Serine_aminopeptidase,_S33,_and_Enterobacterial_common_antigen_metabolic_process


id: CL:3640
description: Mixed, incl. Tetratricopeptide repeat, and Prokaryotic transglycosylase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3640_Mixed,_incl._Tetratricopeptide_repeat,_and_Prokaryotic_transglycosylase,_active_site


id: CL:365
description: Mixed, incl. RNA degradation, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:365_Mixed,_incl._RNA_degradation,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:3656
description: Asparaginase activity, and Asparagine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3656_Asparaginase_activity,_and_Asparagine_synthase


id: CL:366
description: RNA catabolic process, and NUDIX hydrolase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:366_RNA_catabolic_process,_and_NUDIX_hydrolase_domain


id: CL:3665
description: Mixed, incl. Dihydrokaempferol 4-reductase activity, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3665_Mixed,_incl._Dihydrokaempferol_4-reductase_activity,_and_Glycosyl_transferase_family_2


id: CL:3666
description: Mixed, incl. NAD dependent epimerase/dehydratase family, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3666_Mixed,_incl._NAD_dependent_epimerase/dehydratase_family,_and_Glycosyl_transferase_family_2


id: CL:3669
description: Mixed, incl. Xylose isomerase-like TIM barrel, and dTDP-4-dehydrorhamnose reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3669_Mixed,_incl._Xylose_isomerase-like_TIM_barrel,_and_dTDP-4-dehydrorhamnose_reductase_activity


id: CL:368
description: RNA helicase activity, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:368_RNA_helicase_activity,_and_NUDIX_domain


id: CL:3681
description: Dihydrokaempferol 4-reductase activity, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3681_Dihydrokaempferol_4-reductase_activity,_and_Glycosyl_transferase_family_4


id: CL:3691
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3691_Mixed,_incl._Methionine_biosynthesis_protein_MetW,_and_GDP-L-fucose_synthase/GDP-L-colitose_synthase

description:
  Mixed, incl. Methionine biosynthesis protein MetW, and GDP-L-fucose synthase/GDP-L-colitose synthase


id: CL:3700
description: Mixed, incl. SGNH domain, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3700_Mixed,_incl._SGNH_domain,_and_Glycosyltransferase_like_family_2


id: CL:3711
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3711_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase,_and_Proton_motive_force-driven_plasma_membrane_ATP_synthesis

description:
  Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase, and Proton motive force-driven plasma membrane ATP synthesis


id: CL:3724
description: Mixed, incl. Lipopolysaccharide biosynthesis, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3724_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_KR_domain


id: CL:3725
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Carbamoyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3725_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Carbamoyltransferase


id: CL:3726
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3726_Mixed,_incl._Lipopolysaccharide_kinase_(Kdo/WaaP)_family,_and_Cellular_polysaccharide_biosynthetic_process

description:
  Mixed, incl. Lipopolysaccharide kinase (Kdo/WaaP) family, and Cellular polysaccharide biosynthetic process


id: CL:3727
description: Mixed, incl. Lipopolysaccharide kinase (Kdo/WaaP) family, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3727_Mixed,_incl._Lipopolysaccharide_kinase_(Kdo/WaaP)_family,_and_Glycosyl_transferase,_family_9


id: CL:3730
description: Mixed, incl. Lipopolysaccharide kinase (Kdo/WaaP) family, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3730_Mixed,_incl._Lipopolysaccharide_kinase_(Kdo/WaaP)_family,_and_Glycosyl_transferase,_family_9


id: CL:3731
description: Lipopolysaccharide kinase (Kdo/WaaP) family, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3731_Lipopolysaccharide_kinase_(Kdo/WaaP)_family,_and_Glycosyl_transferase,_family_9


id: CL:3744
description: Mixed, incl. Putative lipopolysaccharide kinase InaA, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3744_Mixed,_incl._Putative_lipopolysaccharide_kinase_InaA,_and_BamE-like


id: CL:3762
description: Mixed, incl. Carbamoyltransferase, and Polysaccharide pyruvyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3762_Mixed,_incl._Carbamoyltransferase,_and_Polysaccharide_pyruvyl_transferase


id: CL:3774
description: Mixed, incl. Carbohydrate metabolism, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3774_Mixed,_incl._Carbohydrate_metabolism,_and_Glycosyl_transferase,_family_9


id: CL:3775
description: Mixed, incl. Glycosyl transferase, family 9, and Carbamoyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3775_Mixed,_incl._Glycosyl_transferase,_family_9,_and_Carbamoyltransferase


id: CL:3778
description: Mixed, incl. Carbamoyltransferase, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3778_Mixed,_incl._Carbamoyltransferase,_and_Glycosyl_transferases_group_1


id: CL:3795
description: Mixed, incl. Histidinol-phosphate phosphatase, and Carbohydrate kinase PfkB
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3795_Mixed,_incl._Histidinol-phosphate_phosphatase,_and_Carbohydrate_kinase_PfkB


id: CL:380
description: Ribonuclease E/G, and PNPase/RNase PH domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:380_Ribonuclease_E/G,_and_PNPase/RNase_PH_domain_superfamily


id: CL:3808
description: Mostly uncharacterized, incl. STAS domain, and Lipopolysaccharide core region metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3808_Mostly_uncharacterized,_incl._STAS_domain,_and_Lipopolysaccharide_core_region_metabolic_process


id: CL:3809
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3809_Mixed,_incl._Lipopolysaccharide_core_region_metabolic_process,_and_ABC_transporter_type_1,_transmembrane_domain

description:
  Mixed, incl. Lipopolysaccharide core region metabolic process, and ABC transporter type 1, transmembrane domain


id: CL:3812
description: Mixed, incl. O-Antigen ligase, and Polysaccharide pyruvyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3812_Mixed,_incl._O-Antigen_ligase,_and_Polysaccharide_pyruvyl_transferase


id: CL:3825
description: Mixed, incl. Glycosyl transferase 4-like, and START-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3825_Mixed,_incl._Glycosyl_transferase_4-like,_and_START-like_domain_superfamily


id: CL:3836
description: STAS domain, and Protein-tyrosine phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3836_STAS_domain,_and_Protein-tyrosine_phosphatase-like


id: CL:3851
description: Mixed, incl. Starch and sucrose metabolism, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3851_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Response_to_osmotic_stress


id: CL:3853
description: Mixed, incl. Starch and sucrose metabolism, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3853_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Response_to_osmotic_stress


id: CL:3854
description: Mixed, incl. Glycosyl hydrolase, family 13, catalytic domain, and Ferritin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3854_Mixed,_incl._Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Ferritin-like


id: CL:3855
description: Mixed, incl. Glycosyl hydrolase, family 13, catalytic domain, and ATP dependent DNA ligase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3855_Mixed,_incl._Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_ATP_dependent_DNA_ligase_domain


id: CL:3856
description: Mixed, incl. Glycosyl hydrolase, family 13, catalytic domain, and Glycogen biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3856_Mixed,_incl._Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycogen_biosynthesis


id: CL:3858
description: Glycosyl hydrolase, family 13, catalytic domain, and Glycogen biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3858_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycogen_biosynthesis


id: CL:3891
description: Mixed, incl. ATP dependent DNA ligase domain, and Domain of unknown function (DUF4142)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3891_Mixed,_incl._ATP_dependent_DNA_ligase_domain,_and_Domain_of_unknown_function_(DUF4142)


id: CL:3893
description: Non-homologous end-joining, and Domain of unknown function (DUF4142)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3893_Non-homologous_end-joining,_and_Domain_of_unknown_function_(DUF4142)


id: CL:390
description: Pseudouridine synthase, RluA-like, conserved site, and Ribonuclease II/R
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:390_Pseudouridine_synthase,_RluA-like,_conserved_site,_and_Ribonuclease_II/R


id: CL:3910
description: Mixed, incl. Cellular transition metal ion homeostasis, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3910_Mixed,_incl._Cellular_transition_metal_ion_homeostasis,_and_BON_domain


id: CL:3923
description: Mixed, incl. Response to osmotic stress, and Protein of unknown function (DUF1328)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3923_Mixed,_incl._Response_to_osmotic_stress,_and_Protein_of_unknown_function_(DUF1328)


id: CL:3925
description: Mixed, incl. Uncharacterized cysteine-rich protein YhjQ-like, and PRC-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3925_Mixed,_incl._Uncharacterized_cysteine-rich_protein_YhjQ-like,_and_PRC-barrel_domain


id: CL:3944
description: Mixed, incl. Protein of unknown function DUF748, and Protein of unknown function (DUF1328)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3944_Mixed,_incl._Protein_of_unknown_function_DUF748,_and_Protein_of_unknown_function_(DUF1328)


id: CL:3966
description: Mixed, incl. Putative Actinobacterial Holin-X, holin superfamily III, and Virulence factor BrkB
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3966_Mixed,_incl._Putative_Actinobacterial_Holin-X,_holin_superfamily_III,_and_Virulence_factor_BrkB


id: CL:3982
description: Mixed, incl. Glycerophospholipid metabolism, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3982_Mixed,_incl._Glycerophospholipid_metabolism,_and_Glycerolipid_metabolism


id: CL:3983
description: Mixed, incl. Glycerophospholipid metabolism, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3983_Mixed,_incl._Glycerophospholipid_metabolism,_and_Glycerolipid_metabolism


id: CL:3984
description: Mixed, incl. Glycerophospholipid metabolism, and Endonuclease/Exonuclease/phosphatase family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3984_Mixed,_incl._Glycerophospholipid_metabolism,_and_Endonuclease/Exonuclease/phosphatase_family


id: CL:3986
description: Mixed, incl. Phospholipid metabolism, and Phospholipase D. Active site motifs.
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3986_Mixed,_incl._Phospholipid_metabolism,_and_Phospholipase_D._Active_site_motifs.


id: CL:3987
description: Phospholipid metabolism, and CDP-alcohol phosphatidyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:3987_Phospholipid_metabolism,_and_CDP-alcohol_phosphatidyltransferase_activity


id: CL:4001
description: Mixed, incl. Cardiolipin metabolic process, and Ferritin-like diiron domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4001_Mixed,_incl._Cardiolipin_metabolic_process,_and_Ferritin-like_diiron_domain


id: CL:4014
description: Mixed, incl. Phosphate acyltransferases, and Response to nickel cation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4014_Mixed,_incl._Phosphate_acyltransferases,_and_Response_to_nickel_cation


id: CL:4017
description: Mixed, incl. Cytidylyltransferase family, and Tyrosine-specific protein phosphatases domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4017_Mixed,_incl._Cytidylyltransferase_family,_and_Tyrosine-specific_protein_phosphatases_domain


id: CL:4035
description: Mixed, incl. Glycerolipid metabolism, and glycerol-3-phosphate dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4035_Mixed,_incl._Glycerolipid_metabolism,_and_glycerol-3-phosphate_dehydrogenase_complex


id: CL:4036
description: Mixed, incl. Phospholipid metabolism, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4036_Mixed,_incl._Phospholipid_metabolism,_and_Phosphate_acyltransferases


id: CL:4037
description: Phospholipid metabolism, and Phosphatidic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4037_Phospholipid_metabolism,_and_Phosphatidic_acid_metabolic_process


id: CL:4048
description: Mixed, incl. Glycine zipper 2TM domain, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4048_Mixed,_incl._Glycine_zipper_2TM_domain,_and_Acetyltransferase_(GNAT)_domain


id: CL:405
description: Methyltransferase complex, and Chromosome separation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:405_Methyltransferase_complex,_and_Chromosome_separation


id: CL:4059
description: Glycerophosphodiester phosphodiesterase domain, and Alditol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4059_Glycerophosphodiester_phosphodiesterase_domain,_and_Alditol_phosphate_metabolic_process


id: CL:4075
description: Mixed, incl. Domain of unknown function DUF2135, and Peptidase regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4075_Mixed,_incl._Domain_of_unknown_function_DUF2135,_and_Peptidase_regulator_activity


id: CL:4077
description: Domain of unknown function DUF2135, and Peptidase regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4077_Domain_of_unknown_function_DUF2135,_and_Peptidase_regulator_activity


id: CL:4131
description: PAS domain superfamily, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4131_PAS_domain_superfamily,_and_cheY-homologous_receiver_domain


id: CL:4133
description: PAS domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4133_PAS_domain,_and_cheY-homologous_receiver_domain


id: CL:4136
description: PAS domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4136_PAS_domain,_and_cheY-homologous_receiver_domain


id: CL:4139
description: PAS domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4139_PAS_domain,_and_cheY-homologous_receiver_domain


id: CL:415
description: Histone-like DNA-binding protein, and Cold-shock (CSD) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:415_Histone-like_DNA-binding_protein,_and_Cold-shock_(CSD)_domain


id: CL:4153
description: PAS-associated, C-terminal, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4153_PAS-associated,_C-terminal,_and_GGDEF_domain


id: CL:4157
description: PAS-associated, C-terminal, and Histidine Phosphotransfer domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4157_PAS-associated,_C-terminal,_and_Histidine_Phosphotransfer_domain


id: CL:4160
description: PAS-associated, C-terminal, and Chemotaxis response regulator CheV
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4160_PAS-associated,_C-terminal,_and_Chemotaxis_response_regulator_CheV


id: CL:4163
description: PAC motif, and Histidine Phosphotransfer domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4163_PAC_motif,_and_Histidine_Phosphotransfer_domain


id: CL:4166
description: PAC motif, and Histidine Phosphotransfer domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4166_PAC_motif,_and_Histidine_Phosphotransfer_domain


id: CL:4169
description: PAC motif, and Histidine Phosphotransfer domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4169_PAC_motif,_and_Histidine_Phosphotransfer_domain


id: CL:4172
description: Mixed, incl. HPT domain superfamily, and Diguanylate cyclase/phosphodiesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4172_Mixed,_incl._HPT_domain_superfamily,_and_Diguanylate_cyclase/phosphodiesterase


id: CL:4174
description: PAS fold, and Histidine Phosphotransfer domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4174_PAS_fold,_and_Histidine_Phosphotransfer_domain


id: CL:4184
description: HPT domain superfamily, and Diguanylate cyclase/phosphodiesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4184_HPT_domain_superfamily,_and_Diguanylate_cyclase/phosphodiesterase


id: CL:424
description: Mixed, incl. Small GTP-binding protein domain, and mRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:424_Mixed,_incl._Small_GTP-binding_protein_domain,_and_mRNA_processing


id: CL:428
description: Mixed, incl. Small GTP-binding protein domain, and mRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:428_Mixed,_incl._Small_GTP-binding_protein_domain,_and_mRNA_processing


id: CL:4296
description: OmpR/PhoB-type DNA-binding domain, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4296_OmpR/PhoB-type_DNA-binding_domain,_and_Phosphate_ion_transport


id: CL:4344
description: Mixed, incl. Histidine kinase CheA-like, homodimeric domain superfamily, and Protein deamination
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4344_Mixed,_incl._Histidine_kinase_CheA-like,_homodimeric_domain_superfamily,_and_Protein_deamination


id: CL:4364
description: Mixed, incl. Protein deamination, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4364_Mixed,_incl._Protein_deamination,_and_MCP_methyltransferase,_CheR-type


id: CL:4410
description: Diguanylate cyclase activity, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4410_Diguanylate_cyclase_activity,_and_HD-GYP_domain


id: CL:4411
description: Mixed, incl. Diguanylate cyclase activity, and Response to blue light
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4411_Mixed,_incl._Diguanylate_cyclase_activity,_and_Response_to_blue_light


id: CL:4413
description: Mixed, incl. Response to blue light, and Histidine kinase BarA, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4413_Mixed,_incl._Response_to_blue_light,_and_Histidine_kinase_BarA,_N-terminal


id: CL:4434
description: Protein of unknown function DUF3391, and Cell-substrate adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4434_Protein_of_unknown_function_DUF3391,_and_Cell-substrate_adhesion


id: CL:4446
description: Mixed, incl. Rubredoxin, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4446_Mixed,_incl._Rubredoxin,_and_CheW-like_domain


id: CL:445
description: Mixed, incl. Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:445_Mixed,_incl._Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:446
description: Mixed, incl. Protein folding chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:446_Mixed,_incl._Protein_folding_chaperone,_and_ATP-dependent_peptidase_activity


id: CL:4460
description: Sigma-54 interaction domain, conserved site, and Sigma-54, DNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4460_Sigma-54_interaction_domain,_conserved_site,_and_Sigma-54,_DNA_binding_domain


id: CL:4478
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4478_Signal_transduction_histidine_kinase,_subgroup_3,_dimerisation_and_phosphoacceptor_domain,_and_Helix_turn_helix,_Lux_Regulon

description:
  Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain, and Helix_turn_helix, Lux Regulon


id: CL:448
description: Protein folding chaperone, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:448_Protein_folding_chaperone,_and_DnaJ_domain


id: CL:4480
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4480_Signal_transduction_histidine_kinase,_subgroup_3,_dimerisation_and_phosphoacceptor_domain,_and_Helix_turn_helix,_Lux_Regulon

description:
  Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain, and Helix_turn_helix, Lux Regulon


id: CL:450
description: Protein folding chaperone, and ATPase regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:450_Protein_folding_chaperone,_and_ATPase_regulator_activity


id: CL:4503
description: Mixed, incl. NAD+ kinase activity, and Urea ABC transporter, substrate-binding protein UrtA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4503_Mixed,_incl._NAD+_kinase_activity,_and_Urea_ABC_transporter,_substrate-binding_protein_UrtA-like


id: CL:4520
description: Cilium, and cyclic-di-GMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4520_Cilium,_and_cyclic-di-GMP_binding


id: CL:4524
description: Cilium, and Bacterial-type flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4524_Cilium,_and_Bacterial-type_flagellum-dependent_cell_motility


id: CL:4528
description: Bacterial-type flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4528_Bacterial-type_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:4530
description: Bacterial-type flagellum basal body, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4530_Bacterial-type_flagellum_basal_body,_and_Bacterial-type_flagellum_assembly


id: CL:4531
description: Bacterial-type flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4531_Bacterial-type_flagellum-dependent_cell_motility


id: CL:4535
description: Flagellar basal body rod protein, N-terminal, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4535_Flagellar_basal_body_rod_protein,_N-terminal,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:4564
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4564_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:4580
description: Bacterial-type flagellum hook, and Flagellin hook IN motif
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4580_Bacterial-type_flagellum_hook,_and_Flagellin_hook_IN_motif


id: CL:4643
description: Mixed, incl. Protein kinase domain, and Sigma factor PP2C-like phosphatases
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4643_Mixed,_incl._Protein_kinase_domain,_and_Sigma_factor_PP2C-like_phosphatases


id: CL:4645
description: Protein kinase domain, and Forkhead associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4645_Protein_kinase_domain,_and_Forkhead_associated_domain


id: CL:4646
description: Protein kinase domain, and Sigma factor PP2C-like phosphatases
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4646_Protein_kinase_domain,_and_Sigma_factor_PP2C-like_phosphatases


id: CL:4648
description: Forkhead associated domain, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4648_Forkhead_associated_domain,_and_Protein_phosphatase_2C_family


id: CL:4669
description: Cyclase activity, and Serine/threonine-protein kinase Atg1-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4669_Cyclase_activity,_and_Serine/threonine-protein_kinase_Atg1-like


id: CL:4689
description: Mixed, incl. HemN, C-terminal, and rRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4689_Mixed,_incl._HemN,_C-terminal,_and_rRNA_catabolic_process


id: CL:4709
description: Mixed, incl. Bactofilin A/B, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4709_Mixed,_incl._Bactofilin_A/B,_and_Sporulation


id: CL:4720
description: Mixed, incl. Single cache domain 3, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4720_Mixed,_incl._Single_cache_domain_3,_and_Von_Willebrand_factor,_type_A


id: CL:474
description: Clp ATPase, C-terminal, and ATP-dependent Clp protease proteolytic subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:474_Clp_ATPase,_C-terminal,_and_ATP-dependent_Clp_protease_proteolytic_subunit


id: CL:4755
description: Mixed, incl. Histidine metabolism, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4755_Mixed,_incl._Histidine_metabolism,_and_Antibiotic_resistance


id: CL:4757
description: Mostly uncharacterized, incl. Antibiotic resistance, and Magnesium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4757_Mostly_uncharacterized,_incl._Antibiotic_resistance,_and_Magnesium_ion_transport


id: CL:4758
description: Mixed, incl. Antibiotic resistance, and Putative RNA methylase family UPF0020
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4758_Mixed,_incl._Antibiotic_resistance,_and_Putative_RNA_methylase_family_UPF0020


id: CL:4769
description: Mixed, incl. Magnesium ion transport, and Hexosaminidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4769_Mixed,_incl._Magnesium_ion_transport,_and_Hexosaminidase_activity


id: CL:4787
description: Mixed, incl. Nickel cation binding, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4787_Mixed,_incl._Nickel_cation_binding,_and_Protein_maturation


id: CL:4789
description: Mixed, incl. Nickel cation binding, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4789_Mixed,_incl._Nickel_cation_binding,_and_Protein_maturation


id: CL:4790
description: Mixed, incl. Ferredoxin hydrogenase activity, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4790_Mixed,_incl._Ferredoxin_hydrogenase_activity,_and_Protein_maturation


id: CL:4792
description: Mixed, incl. Nitrotoluene degradation, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4792_Mixed,_incl._Nitrotoluene_degradation,_and_Protein_maturation


id: CL:4794
description: Mixed, incl. HupF/HypC family, and Peptidase A31 family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4794_Mixed,_incl._HupF/HypC_family,_and_Peptidase_A31_family


id: CL:4808
description: Ferredoxin hydrogenase activity, and Cytochrome b561, bacterial/Ni-hydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4808_Ferredoxin_hydrogenase_activity,_and_Cytochrome_b561,_bacterial/Ni-hydrogenase


id: CL:4821
description: ATPase complex, and HupF/HypC family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4821_ATPase_complex,_and_HupF/HypC_family


id: CL:4837
description: Urea metabolic process, and Nickel insertion
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4837_Urea_metabolic_process,_and_Nickel_insertion


id: CL:4866
description: Mixed, incl. Signal, and Polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4866_Mixed,_incl._Signal,_and_Polysaccharide_metabolic_process


id: CL:4867
description: Mixed, incl. Signal, and Phasin protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4867_Mixed,_incl._Signal,_and_Phasin_protein


id: CL:4868
description: Mixed, incl. Signal, and Phasin protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4868_Mixed,_incl._Signal,_and_Phasin_protein


id: CL:4869
description: Mostly uncharacterized, incl. Phasin protein, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4869_Mostly_uncharacterized,_incl._Phasin_protein,_and_Peptidoglycan_binding


id: CL:4870
description: Mostly uncharacterized, incl. Phasin protein, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4870_Mostly_uncharacterized,_incl._Phasin_protein,_and_Identical_protein_binding


id: CL:4871
description: Mostly uncharacterized, incl. Phasin protein, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4871_Mostly_uncharacterized,_incl._Phasin_protein,_and_Identical_protein_binding


id: CL:4873
description: Mostly uncharacterized, incl. Phasin protein, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4873_Mostly_uncharacterized,_incl._Phasin_protein,_and_Identical_protein_binding


id: CL:4875
description: Mostly uncharacterized, incl. Phasin protein, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4875_Mostly_uncharacterized,_incl._Phasin_protein,_and_Identical_protein_binding


id: CL:4876
description: Mostly uncharacterized, incl. Phasin protein, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4876_Mostly_uncharacterized,_incl._Phasin_protein,_and_BamE-like


id: CL:4877
description: Mostly uncharacterized, incl. Phasin protein, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4877_Mostly_uncharacterized,_incl._Phasin_protein,_and_BamE-like


id: CL:4878
description: Mixed, incl. Peptidoglycan binding, and Lipopolysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4878_Mixed,_incl._Peptidoglycan_binding,_and_Lipopolysaccharide_metabolic_process


id: CL:488
description: Mixed, incl. Rotamase, and Helicase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:488_Mixed,_incl._Rotamase,_and_Helicase,_C-terminal


id: CL:4880
description: Mixed, incl. Peptidoglycan binding, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4880_Mixed,_incl._Peptidoglycan_binding,_and_Mannosylation


id: CL:490
description: Mixed, incl. Peptidyl-proline modification, and Maturation of SSU-rRNA
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:490_Mixed,_incl._Peptidyl-proline_modification,_and_Maturation_of_SSU-rRNA


id: CL:4900
description: Mixed, incl. Sister chromatid cohesion, and TerB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4900_Mixed,_incl._Sister_chromatid_cohesion,_and_TerB-like


id: CL:4917
description: Mixed, incl. Phasin protein, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4917_Mixed,_incl._Phasin_protein,_and_BamE-like


id: CL:4919
description: Mixed, incl. DNA methylation on adenine, and Domain of unknown function DUF4124
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4919_Mixed,_incl._DNA_methylation_on_adenine,_and_Domain_of_unknown_function_DUF4124


id: CL:4934
description: Phasin protein, and START-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4934_Phasin_protein,_and_START-like_domain_superfamily


id: CL:4949
description: Mixed, incl. Carnitine metabolic process, and Phasin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4949_Mixed,_incl._Carnitine_metabolic_process,_and_Phasin


id: CL:4953
description: Carnitine metabolic process, and Phasin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4953_Carnitine_metabolic_process,_and_Phasin


id: CL:4974
description: Mixed, incl. Aquaporin-like, and Surface antigen D15-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4974_Mixed,_incl._Aquaporin-like,_and_Surface_antigen_D15-like


id: CL:4992
description: Mixed, incl. NTF2-like domain superfamily, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4992_Mixed,_incl._NTF2-like_domain_superfamily,_and_FMN-binding_split_barrel


id: CL:4995
description: Mixed, incl. Lipid transfer activity, and Lipid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:4995_Mixed,_incl._Lipid_transfer_activity,_and_Lipid_binding


id: CL:5023
description: Mixed, incl. HIT domain, and Aldonic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5023_Mixed,_incl._HIT_domain,_and_Aldonic_acid_metabolic_process


id: CL:5034
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5034_Uncharacterized_protein_conserved_in_bacteria_(DUF2325),_and_Alkaline-phosphatase-like,_core_domain_superfamily

description:
  Uncharacterized protein conserved in bacteria (DUF2325), and Alkaline-phosphatase-like, core domain superfamily


id: CL:5043
description: Mixed, incl. Peptidoglycan binding, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5043_Mixed,_incl._Peptidoglycan_binding,_and_DHHA1_domain


id: CL:5045
description: Mixed, incl. DHHA1 domain, and Phosphoglycerate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5045_Mixed,_incl._DHHA1_domain,_and_Phosphoglycerate_mutase_activity


id: CL:5061
description: Mixed, incl. Peptidoglycan binding, and MFS_1 like family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5061_Mixed,_incl._Peptidoglycan_binding,_and_MFS_1_like_family


id: CL:5073
description: Mixed, incl. Protein self-association, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5073_Mixed,_incl._Protein_self-association,_and_Tetratricopeptide_repeat


id: CL:508
description: Mixed, incl. Vacuole, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:508_Mixed,_incl._Vacuole,_and_DHHA1_domain


id: CL:5091
description: Mixed, incl. Peptidase S1C, Do, and Gram-negative porin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5091_Mixed,_incl._Peptidase_S1C,_Do,_and_Gram-negative_porin


id: CL:5094
description: Gram-negative porin, and Peptidase S1C, Do
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5094_Gram-negative_porin,_and_Peptidase_S1C,_Do


id: CL:5113
description: Mixed, incl. Sigma-70, region 4, and Positive regulator of sigma(E), RseC/MucC
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5113_Mixed,_incl._Sigma-70,_region_4,_and_Positive_regulator_of_sigma(E),_RseC/MucC


id: CL:5124
description: Mostly uncharacterized, incl. Protein glycosylation, and Ubiquitin-protein transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5124_Mostly_uncharacterized,_incl._Protein_glycosylation,_and_Ubiquitin-protein_transferase_activity


id: CL:5125
description: Mostly uncharacterized, incl. Ubiquitin-protein transferase activity, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5125_Mostly_uncharacterized,_incl._Ubiquitin-protein_transferase_activity,_and_Protein_glycosylation


id: CL:5126
description: Mixed, incl. Protein glycosylation, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5126_Mixed,_incl._Protein_glycosylation,_and_Antioxidant_activity


id: CL:5127
description: Mixed, incl. Sialidase superfamily, and Mannosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5127_Mixed,_incl._Sialidase_superfamily,_and_Mannosyltransferase_activity


id: CL:5129
description: Acid phosphatase homologues, and Mannosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5129_Acid_phosphatase_homologues,_and_Mannosyltransferase_activity


id: CL:5144
description: Mixed, incl. Sialidase superfamily, and Outer membrane protein beta-barrel family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5144_Mixed,_incl._Sialidase_superfamily,_and_Outer_membrane_protein_beta-barrel_family


id: CL:5156
description: Mixed, incl. Cytochrome-c peroxidase activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5156_Mixed,_incl._Cytochrome-c_peroxidase_activity,_and_Tetratricopeptide_repeats


id: CL:5159
description: Cytochrome-c peroxidase activity, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5159_Cytochrome-c_peroxidase_activity,_and_Heme_binding


id: CL:5188
description: Mixed, incl. Beta-glucan biosynthetic process, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5188_Mixed,_incl._Beta-glucan_biosynthetic_process,_and_Other_glycan_degradation


id: CL:5190
description: Mixed, incl. Other glycan degradation, and Beta-glucan biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5190_Mixed,_incl._Other_glycan_degradation,_and_Beta-glucan_biosynthetic_process


id: CL:5209
description: Mostly uncharacterized, incl. Class II aldolase/adducin N-terminal, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5209_Mostly_uncharacterized,_incl._Class_II_aldolase/adducin_N-terminal,_and_Endonuclease


id: CL:5210
description: Mixed, incl. Extracellular region, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5210_Mixed,_incl._Extracellular_region,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:5211
description: Mostly uncharacterized, incl. PLD-like domain, and Glutamate--cysteine ligase, GCS2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5211_Mostly_uncharacterized,_incl._PLD-like_domain,_and_Glutamate--cysteine_ligase,_GCS2


id: CL:5213
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5213_Mostly_uncharacterized,_incl._Glutamate--cysteine_ligase,_GCS2,_and_Glutamine_amidotransferase_class-I

description:
  Mostly uncharacterized, incl. Glutamate--cysteine ligase, GCS2, and Glutamine amidotransferase class-I


id: CL:5216
description: Mixed, incl. Chromosome condensation, and Short-chain fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5216_Mixed,_incl._Chromosome_condensation,_and_Short-chain_fatty_acid_metabolic_process


id: CL:522
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:522_Mixed,_incl._Glucosyltransferase_activity,_and_Pseudouridine_synthase,_RsuA/RluB/E/F,_conserved_site

description:
  Mixed, incl. Glucosyltransferase activity, and Pseudouridine synthase, RsuA/RluB/E/F, conserved site


id: CL:5244
description: Mixed, incl. Protein of unknown function DUF3106, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5244_Mixed,_incl._Protein_of_unknown_function_DUF3106,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:5255
description: Mixed, incl. Class II aldolase/adducin N-terminal, and Glycolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5255_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_Glycolate_metabolic_process


id: CL:5257
description: Mixed, incl. Class II aldolase/adducin N-terminal, and TonB-dependent receptor, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5257_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_TonB-dependent_receptor,_conserved_site


id: CL:5269
description: Mixed, incl. Glycolate metabolic process, and Glyoxalase-like domain, group 6
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5269_Mixed,_incl._Glycolate_metabolic_process,_and_Glyoxalase-like_domain,_group_6


id: CL:5281
description: Mostly uncharacterized, incl. psiF repeat, and Potassium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5281_Mostly_uncharacterized,_incl._psiF_repeat,_and_Potassium_ion_binding


id: CL:5283
description: Mixed, incl. Putative Actinobacterial Holin-X, holin superfamily III, and Ribosome binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5283_Mixed,_incl._Putative_Actinobacterial_Holin-X,_holin_superfamily_III,_and_Ribosome_binding


id: CL:5311
description: Mixed, incl. Bacterial secretion system, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5311_Mixed,_incl._Bacterial_secretion_system,_and_Phospholipid_transport


id: CL:5313
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5313_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:5315
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5315_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:5319
description: Mixed, incl. Type II secretion system protein GspE, N-terminal, and Pilus
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5319_Mixed,_incl._Type_II_secretion_system_protein_GspE,_N-terminal,_and_Pilus


id: CL:5333
description: Type II secretion system protein GspE, N-terminal, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5333_Type_II_secretion_system_protein_GspE,_N-terminal,_and_GspF/PilC_family


id: CL:534
description: Mixed, incl. Band 7 domain, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:534_Mixed,_incl._Band_7_domain,_and_GTP_binding_domain


id: CL:5345
description: Pilus assembly, and PilC beta-propeller domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5345_Pilus_assembly,_and_PilC_beta-propeller_domain


id: CL:5347
description: Prokaryotic N-terminal methylation site, and PilC beta-propeller domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5347_Prokaryotic_N-terminal_methylation_site,_and_PilC_beta-propeller_domain


id: CL:5358
description: Type II protein secretion system complex, and PilC beta-propeller domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5358_Type_II_protein_secretion_system_complex,_and_PilC_beta-propeller_domain


id: CL:536
description: Mixed, incl. Methyltransferase (Class A), and histidine-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:536_Mixed,_incl._Methyltransferase_(Class_A),_and_histidine-tRNA_ligase_activity


id: CL:5375
description: Mixed, incl. Protein transport across the cell outer membrane, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5375_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Transglycosylase_SLT_domain


id: CL:5378
description: Mixed, incl. Protein transport across the cell outer membrane, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5378_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_NolW-like


id: CL:5380
description: Protein transport across the cell outer membrane, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5380_Protein_transport_across_the_cell_outer_membrane,_and_NolW-like


id: CL:5409
description: Mixed, incl. Retropepsin-like domain, bacterial, and Purine-nucleoside phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5409_Mixed,_incl._Retropepsin-like_domain,_bacterial,_and_Purine-nucleoside_phosphorylase_activity


id: CL:5423
description: Mixed, incl. Phospholipid transport, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5423_Mixed,_incl._Phospholipid_transport,_and_Pilin-like


id: CL:5424
description: Mixed, incl. Phospholipid transport, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5424_Mixed,_incl._Phospholipid_transport,_and_Pilin-like


id: CL:5440
description: Phospholipid transporter activity, and MlaC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5440_Phospholipid_transporter_activity,_and_MlaC_protein


id: CL:5455
description: Mixed, incl. Pilin-like, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5455_Mixed,_incl._Pilin-like,_and_Antibiotic_biosynthetic_process


id: CL:5458
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5458_Mixed,_incl._Antibiotic_biosynthetic_process,_and_Type_II_secretion_system_protein_GspD,_conserved_site

description:
  Mixed, incl. Antibiotic biosynthetic process, and Type II secretion system protein GspD, conserved site


id: CL:5481
description: Mixed, incl. Heparin binding, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5481_Mixed,_incl._Heparin_binding,_and_Arc-type_ribbon-helix-helix


id: CL:5496
description: Mostly uncharacterized, incl. Phosphotransferase system (PTS), and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5496_Mostly_uncharacterized,_incl._Phosphotransferase_system_(PTS),_and_PLD-like_domain


id: CL:5497
description: Mostly uncharacterized, incl. Heparin binding, and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5497_Mostly_uncharacterized,_incl._Heparin_binding,_and_PLD-like_domain


id: CL:5499
description: Mixed, incl. Heparin binding, and Protein of unknown function (DUF559)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5499_Mixed,_incl._Heparin_binding,_and_Protein_of_unknown_function_(DUF559)


id: CL:5524
description: Mixed, incl. RNA ligase activity, and Glycine zipper 2TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5524_Mixed,_incl._RNA_ligase_activity,_and_Glycine_zipper_2TM_domain


id: CL:5533
description: Mixed, incl. MerR transcriptional regulator, and Ferric reductase like transmembrane component
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5533_Mixed,_incl._MerR_transcriptional_regulator,_and_Ferric_reductase_like_transmembrane_component


id: CL:5534
description: Mixed, incl. Pfam phage integrase family, and MerR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5534_Mixed,_incl._Pfam_phage_integrase_family,_and_MerR_transcriptional_regulator


id: CL:5545
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5545_Mixed,_incl._Ferric_reductase_like_transmembrane_component,_and_Nitrogen_regulatory_PII-like,_alpha/beta

description:
  Mixed, incl. Ferric reductase like transmembrane component, and Nitrogen regulatory PII-like, alpha/beta


id: CL:5554
description: Mixed, incl. Response to biotic stimulus, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5554_Mixed,_incl._Response_to_biotic_stimulus,_and_Methyltransferase_small_domain


id: CL:5556
description: Mixed, incl. DNA methylation on cytosine, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5556_Mixed,_incl._DNA_methylation_on_cytosine,_and_Ami_2


id: CL:5557
description: Mixed, incl. DNA methylation on cytosine, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5557_Mixed,_incl._DNA_methylation_on_cytosine,_and_Quorum_sensing


id: CL:5568
description: Mixed, incl. Ami_2, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5568_Mixed,_incl._Ami_2,_and_PGBD_superfamily


id: CL:5584
description: Mixed, incl. LysE type translocator, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5584_Mixed,_incl._LysE_type_translocator,_and_Methyltransferase_domain


id: CL:5594
description: Mixed, incl. Transporter activity, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5594_Mixed,_incl._Transporter_activity,_and_MacB,_ATP-binding_domain


id: CL:5595
description: Mixed, incl. beta-Lactam resistance, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5595_Mixed,_incl._beta-Lactam_resistance,_and_HlyD_family_secretion_protein


id: CL:5596
description: Mixed, incl. beta-Lactam resistance, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5596_Mixed,_incl._beta-Lactam_resistance,_and_HlyD_family_secretion_protein


id: CL:5597
description: Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5597_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:5598
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5598_Mixed,_incl._HlyD_family_secretion_protein,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. HlyD family secretion protein, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:5599
description: Mixed, incl. Outer membrane efflux protein, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5599_Mixed,_incl._Outer_membrane_efflux_protein,_and_HlyD_family_secretion_protein


id: CL:5600
description: Mixed, incl. Outer membrane efflux protein, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5600_Mixed,_incl._Outer_membrane_efflux_protein,_and_HlyD_family_secretion_protein


id: CL:5601
description: Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5601_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:5602
description: Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5602_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:5603
description: Mixed, incl. RND efflux pump, membrane fusion protein, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5603_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_Outer_membrane_efflux_protein


id: CL:5604
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5604_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_RND_efflux_system,_outer_membrane_lipoprotein,_NodT

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, and RND efflux system, outer membrane lipoprotein, NodT


id: CL:5605
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5605_Mixed,_incl._RND_efflux_system,_outer_membrane_lipoprotein,_NodT,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. RND efflux system, outer membrane lipoprotein, NodT, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:5607
description: Mixed, incl. MMPL family, and Type I secretion outer membrane protein, TolC
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5607_Mixed,_incl._MMPL_family,_and_Type_I_secretion_outer_membrane_protein,_TolC


id: CL:5623
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5623_RND_efflux_system,_outer_membrane_lipoprotein,_NodT,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  RND efflux system, outer membrane lipoprotein, NodT, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:563
description: Sigma-70 factor, region 1.2, and Helix_turn_helix, cAMP Regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:563_Sigma-70_factor,_region_1.2,_and_Helix_turn_helix,_cAMP_Regulatory_protein


id: CL:5636
description: MacB, ATP-binding domain, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5636_MacB,_ATP-binding_domain,_and_MacB-like_periplasmic_core_domain


id: CL:5646
description: HlyD family secretion protein, and Antibiotic metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5646_HlyD_family_secretion_protein,_and_Antibiotic_metabolic_process


id: CL:5656
description: ABC-2 transporter, and RND efflux system, outer membrane lipoprotein, NodT
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5656_ABC-2_transporter,_and_RND_efflux_system,_outer_membrane_lipoprotein,_NodT


id: CL:5665
description: Mixed, incl. Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5665_Mixed,_incl._Cation_efflux_system_CzcA/CusA/SilA/NccA/HelA/CnrA,_and_Prokaryotic_cytochrome_b561


id: CL:5678
description: Mixed, incl. Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5678_Mixed,_incl._Cation_efflux_system_CzcA/CusA/SilA/NccA/HelA/CnrA,_and_Outer_membrane_efflux_protein


id: CL:5692
description: Mixed, incl. CbiX, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5692_Mixed,_incl._CbiX,_and_ThiF_family


id: CL:5703
description: Mixed, incl. Met-10+ like-protein, and Alditol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5703_Mixed,_incl._Met-10+_like-protein,_and_Alditol_metabolic_process


id: CL:5715
description: Mixed, incl. Heavy-metal-associated, conserved site, and Copper binding periplasmic protein CusF
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5715_Mixed,_incl._Heavy-metal-associated,_conserved_site,_and_Copper_binding_periplasmic_protein_CusF


id: CL:5717
description: Mixed, incl. Copper binding periplasmic protein CusF, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5717_Mixed,_incl._Copper_binding_periplasmic_protein_CusF,_and_Cupredoxin


id: CL:5719
description: Cupredoxin, and Copper binding periplasmic protein CusF
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5719_Cupredoxin,_and_Copper_binding_periplasmic_protein_CusF


id: CL:5748
description: Mostly uncharacterized, incl. SGNH hydrolase superfamily, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5748_Mostly_uncharacterized,_incl._SGNH_hydrolase_superfamily,_and_Pectin_lyase_fold


id: CL:5749
description: Mixed, incl. Anion channel activity, and Diguanylate cyclase, GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5749_Mixed,_incl._Anion_channel_activity,_and_Diguanylate_cyclase,_GGDEF_domain


id: CL:5752
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5752_Mixed,_incl._Peptidase_C39,_bacteriocin_processing,_and_Type_I_secretion_outer_membrane_protein,_TolC

description:
  Mixed, incl. Peptidase C39, bacteriocin processing, and Type I secretion outer membrane protein, TolC


id: CL:5769
description: Mixed, incl. SGNH hydrolase superfamily, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5769_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Pectin_lyase_fold


id: CL:5786
description: Mixed, incl. glycyl-tRNA aminoacylation, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5786_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_DNA_integration


id: CL:5788
description: Mixed, incl. AAA domain, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5788_Mixed,_incl._AAA_domain,_and_Methylthiotransferase


id: CL:5814
description: Mixed, incl. Lipoprotein transport, and Protein of unknown function DUF1302
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5814_Mixed,_incl._Lipoprotein_transport,_and_Protein_of_unknown_function_DUF1302


id: CL:5815
description: Mixed, incl. Lipoprotein transport, and Protein of unknown function DUF1302
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5815_Mixed,_incl._Lipoprotein_transport,_and_Protein_of_unknown_function_DUF1302


id: CL:5816
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5816_Mixed,_incl._Protein_of_unknown_function_DUF1329,_and_Photosynthesis_system_II_assembly_factor_YCF48

description:
  Mixed, incl. Protein of unknown function DUF1329, and Photosynthesis system II assembly factor YCF48


id: CL:5817
description: Mixed, incl. Protein of unknown function (DUF1302), and Protein of unknown function DUF1329
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5817_Mixed,_incl._Protein_of_unknown_function_(DUF1302),_and_Protein_of_unknown_function_DUF1329


id: CL:5818
description: Mixed, incl. Protein of unknown function (DUF1302), and Protein of unknown function DUF1329
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5818_Mixed,_incl._Protein_of_unknown_function_(DUF1302),_and_Protein_of_unknown_function_DUF1329


id: CL:5833
description: Mixed, incl. Protein of unknown function (DUF1329), and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5833_Mixed,_incl._Protein_of_unknown_function_(DUF1329),_and_Sterol-sensing_domain


id: CL:584
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:584_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:5843
description: Mixed, incl. Hemicellulose metabolic process, and Protein of unknown function DUF1329
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5843_Mixed,_incl._Hemicellulose_metabolic_process,_and_Protein_of_unknown_function_DUF1329


id: CL:585
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:585_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:5855
description: Lipoprotein transport, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5855_Lipoprotein_transport,_and_Carotenoid_biosynthesis


id: CL:5856
description: Lipoprotein transport, and Uncharacterised conserved protein UCP028205
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5856_Lipoprotein_transport,_and_Uncharacterised_conserved_protein_UCP028205


id: CL:5858
description: MacB-like periplasmic core domain, and Uncharacterised conserved protein UCP028205
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5858_MacB-like_periplasmic_core_domain,_and_Uncharacterised_conserved_protein_UCP028205


id: CL:586
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:586_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:5879
description: Carotenoid biosynthesis, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5879_Carotenoid_biosynthesis,_and_HI0933-like_protein


id: CL:5893
description: Mixed, incl. ferredoxin-NADP+ reductase activity, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5893_Mixed,_incl._ferredoxin-NADP+_reductase_activity,_and_Spermidine_synthase_activity


id: CL:5903
description: Mixed, incl. Iron ion transport, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5903_Mixed,_incl._Iron_ion_transport,_and_Protein_transport


id: CL:5904
description: Mixed, incl. Iron ion transport, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5904_Mixed,_incl._Iron_ion_transport,_and_Protein_transport


id: CL:5905
description: Mixed, incl. Iron ion transport, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5905_Mixed,_incl._Iron_ion_transport,_and_Protein_transport


id: CL:5906
description: Mixed, incl. Iron ion transport, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5906_Mixed,_incl._Iron_ion_transport,_and_Protein_transport


id: CL:5907
description: Mixed, incl. Siderophore transmembrane transporter activity, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5907_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_Protein_transport


id: CL:5908
description: Mixed, incl. Protein transport, and OmpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5908_Mixed,_incl._Protein_transport,_and_OmpA_family


id: CL:5910
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and Energy transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5910_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_Energy_transducer_activity


id: CL:5911
description: Biopolymer transport protein ExbD/TolR, and Energy transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5911_Biopolymer_transport_protein_ExbD/TolR,_and_Energy_transducer_activity


id: CL:5913
description: Biopolymer transport protein ExbD/TolR, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5913_Biopolymer_transport_protein_ExbD/TolR,_and_TonB,_C-terminal


id: CL:592
description: DNA repair complex, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:592_DNA_repair_complex,_and_UvrD-like_helicase_C-terminal_domain


id: CL:5937
description: Mixed, incl. Protein trimerization, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5937_Mixed,_incl._Protein_trimerization,_and_Protein_import


id: CL:594
description: Mixed, incl. DNA damage sensor activity, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:594_Mixed,_incl._DNA_damage_sensor_activity,_and_UvrD-like_helicase_C-terminal_domain


id: CL:5958
description: Mixed, incl. Outer membrane protein, bacterial, and Salmonella infection
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5958_Mixed,_incl._Outer_membrane_protein,_bacterial,_and_Salmonella_infection


id: CL:5977
description: Mixed, incl. TonB-dependent siderophore receptor, and FecR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5977_Mixed,_incl._TonB-dependent_siderophore_receptor,_and_FecR,_N-terminal


id: CL:5979
description: Mixed, incl. FecR, N-terminal, and Secretin/TonB, short N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:5979_Mixed,_incl._FecR,_N-terminal,_and_Secretin/TonB,_short_N-terminal_domain


id: CL:598
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:598_Mixed,_incl._DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity

description:
  Mixed, incl. DNA recombination and repair protein RecA-like, ATP-binding domain, and DNA topoisomerase type I (single strand cut, ATP-independent) activity


id: CL:6004
description: Mixed, incl. Iron storage, and Zinc finger, DksA/TraR C4-type conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6004_Mixed,_incl._Iron_storage,_and_Zinc_finger,_DksA/TraR_C4-type_conserved_site


id: CL:6015
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6015_Mixed,_incl._Transcriptional_repressor,_C-terminal,_and_2-oxoglutarate-dependent_dioxygenase_activity

description:
  Mixed, incl. Transcriptional repressor, C-terminal, and 2-oxoglutarate-dependent dioxygenase activity


id: CL:6025
description: Mixed, incl. Alpha/beta hydrolase family, and Vitamin transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6025_Mixed,_incl._Alpha/beta_hydrolase_family,_and_Vitamin_transmembrane_transport


id: CL:6041
description: Mixed, incl. Cytochrome c/b562, and Six-bladed beta-propeller, TolB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6041_Mixed,_incl._Cytochrome_c/b562,_and_Six-bladed_beta-propeller,_TolB-like


id: CL:6043
description: Mixed, incl. Cytochrome c/b562, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6043_Mixed,_incl._Cytochrome_c/b562,_and_Prokaryotic_cytochrome_b561


id: CL:6045
description: Mixed, incl. Dienelactone hydrolase, and SMP-30/Gluconolactonase/LRE-like region
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6045_Mixed,_incl._Dienelactone_hydrolase,_and_SMP-30/Gluconolactonase/LRE-like_region


id: CL:6071
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6071_Mixed,_incl._tRNA_synthetases_class_I_(W_and_Y),_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mixed, incl. tRNA synthetases class I (W and Y), and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:6080
description: Mostly uncharacterized, incl. Thioredoxin, and Bactofilin A/B
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6080_Mostly_uncharacterized,_incl._Thioredoxin,_and_Bactofilin_A/B


id: CL:6082
description: Mixed, incl. Bactofilin A/B, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6082_Mixed,_incl._Bactofilin_A/B,_and_Peptidase_M23


id: CL:6098
description: Mixed, incl. Thioredoxin, and Protein histidine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6098_Mixed,_incl._Thioredoxin,_and_Protein_histidine_phosphatase_activity


id: CL:6110
description: Mixed, incl. ABC transporters, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6110_Mixed,_incl._ABC_transporters,_and_Prosthetic_group_metabolic_process


id: CL:6111
description: Mixed, incl. ABC transporters, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6111_Mixed,_incl._ABC_transporters,_and_Prosthetic_group_metabolic_process


id: CL:6112
description: Mixed, incl. Inorganic anion transport, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6112_Mixed,_incl._Inorganic_anion_transport,_and_Prosthetic_group_metabolic_process


id: CL:6114
description: Mixed, incl. Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6114_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:6115
description: Mixed, incl. Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6115_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:6116
description: Molybdate ion transport, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6116_Molybdate_ion_transport,_and_Prosthetic_group_metabolic_process


id: CL:6117
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6117_Prosthetic_group_metabolic_process


id: CL:6119
description: Molybdenum cofactor biosynthesis, and ThiS family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6119_Molybdenum_cofactor_biosynthesis,_and_ThiS_family


id: CL:6153
description: Mixed, incl. 4Fe-4S dicluster domain, and Formate dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6153_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Formate_dehydrogenase_(NAD+)_activity


id: CL:6155
description: Mixed, incl. 4Fe-4S dicluster domain, and Formate dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6155_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Formate_dehydrogenase_(NAD+)_activity


id: CL:6157
description: 4Fe-4S dicluster domain, and Formate dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6157_4Fe-4S_dicluster_domain,_and_Formate_dehydrogenase_(NAD+)_activity


id: CL:6180
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6180_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor,_and_ThiS_family

description:
  Mixed, incl. Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor, and ThiS family


id: CL:6190
description: Mixed, incl. Putative RNA methylase family UPF0020, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6190_Mixed,_incl._Putative_RNA_methylase_family_UPF0020,_and_PAS_fold-3


id: CL:6207
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6207_Mixed,_incl._Sulfur_compound_transport,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Mixed, incl. Sulfur compound transport, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:6209
description: Mixed, incl. Sulfur compound transport, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6209_Mixed,_incl._Sulfur_compound_transport,_and_TOBE_domain


id: CL:6210
description: Sulfate transport, and Sulfate reduction
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6210_Sulfate_transport,_and_Sulfate_reduction


id: CL:6214
description: ABC-type sulfate transporter activity, and Sulfate adenylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6214_ABC-type_sulfate_transporter_activity,_and_Sulfate_adenylyltransferase_activity


id: CL:6228
description: Sulfate assimilation, and HTH-type transcriptional regulator CysB, PBP2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6228_Sulfate_assimilation,_and_HTH-type_transcriptional_regulator_CysB,_PBP2_domain


id: CL:6237
description: Bacterial extracellular solute-binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6237_Bacterial_extracellular_solute-binding_protein,_and_TOBE_domain


id: CL:6239
description: Ferric binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6239_Ferric_binding_protein,_and_TOBE_domain


id: CL:6258
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6258_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:6260
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6260_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Solute-binding_protein_family_3,_conserved_site

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Solute-binding protein family 3, conserved site


id: CL:6291
description: Mixed, incl. Nitrogen metabolism, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6291_Mixed,_incl._Nitrogen_metabolism,_and_NMT1/THI5_like


id: CL:6294
description: Nitrate/bicarbonate ABC transporter substrate-binding domain, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6294_Nitrate/bicarbonate_ABC_transporter_substrate-binding_domain,_and_Nitrogen_metabolism


id: CL:6295
description: Mixed, incl. Nitrate/bicarbonate ABC transporter substrate-binding domain, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6295_Mixed,_incl._Nitrate/bicarbonate_ABC_transporter_substrate-binding_domain,_and_NMT1/THI5_like


id: CL:6306
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6306_Mixed,_incl._NADH-rubredoxin_oxidoreductase,_C-terminal,_and_Nitrate/bicarbonate_ABC_transporter_substrate-binding_domain

description:
  Mixed, incl. NADH-rubredoxin oxidoreductase, C-terminal, and Nitrate/bicarbonate ABC transporter substrate-binding domain


id: CL:632
description: DNA polymerase activity, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:632_DNA_polymerase_activity,_and_DNA_ligase_activity


id: CL:6322
description: Mixed, incl. Aquaporin-like, and Nitrite reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6322_Mixed,_incl._Aquaporin-like,_and_Nitrite_reductase_activity


id: CL:6337
description: Mixed, incl. Phosphate ion transport, and Dienelactone hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6337_Mixed,_incl._Phosphate_ion_transport,_and_Dienelactone_hydrolase


id: CL:6338
description: Phosphate ion transport, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6338_Phosphate_ion_transport,_and_Polyphosphate_kinase_activity


id: CL:6354
description: Mixed, incl. Phosphate ion binding, and Porin domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6354_Mixed,_incl._Phosphate_ion_binding,_and_Porin_domain_superfamily


id: CL:6363
description: Mixed, incl. Phosphate transporter, and Dienelactone hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6363_Mixed,_incl._Phosphate_transporter,_and_Dienelactone_hydrolase


id: CL:6375
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Purine nucleobase metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6375_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Purine_nucleobase_metabolic_process


id: CL:6376
description: Tetrapyrrole biosynthetic process, and Ligase activity, forming nitrogen-metal bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6376_Tetrapyrrole_biosynthetic_process,_and_Ligase_activity,_forming_nitrogen-metal_bonds


id: CL:6377
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6377_Tetrapyrrole_biosynthetic_process


id: CL:6378
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6378_Tetrapyrrole_biosynthetic_process


id: CL:6383
description: Tetrapyrrole methylase, and Hydrolase activity, acting on acid carbon-carbon bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6383_Tetrapyrrole_methylase,_and_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: CL:6401
description: Cobalamin biosynthesis, and Protein trimerization
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6401_Cobalamin_biosynthesis,_and_Protein_trimerization


id: CL:6404
description: Threonine-phosphate decarboxylase activity, and CobB/CobQ-like glutamine amidotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6404_Threonine-phosphate_decarboxylase_activity,_and_CobB/CobQ-like_glutamine_amidotransferase


id: CL:6424
description: Siroheme metabolic process, and Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6424_Siroheme_metabolic_process,_and_Protoporphyrinogen_IX_metabolic_process


id: CL:6445
description: Cobalamin transport, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6445_Cobalamin_transport,_and_FecCD_transport_family


id: CL:6457
description: Methanol metabolic process, and Domain of unknown function DUF58
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6457_Methanol_metabolic_process,_and_Domain_of_unknown_function_DUF58


id: CL:6475
description: Mixed, incl. Purine nucleobase metabolic process, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6475_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_Acyl-CoA_N-acyltransferase


id: CL:6476
description: Mixed, incl. Purine nucleobase metabolic process, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6476_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_Acyl-CoA_N-acyltransferase


id: CL:6478
description: Mixed, incl. Purine nucleobase metabolic process, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6478_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_[2Fe-2S]-binding


id: CL:6479
description: Mixed, incl. Purine nucleobase metabolic process, and Aldehyde oxidase/xanthine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6479_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_Aldehyde_oxidase/xanthine_dehydrogenase


id: CL:6480
description: Mixed, incl. Purine nucleobase metabolic process, and Aldehyde oxidase/xanthine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6480_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_Aldehyde_oxidase/xanthine_dehydrogenase


id: CL:6481
description: Mixed, incl. Aldehyde oxidase/xanthine dehydrogenase, and XdhC- CoxI
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6481_Mixed,_incl._Aldehyde_oxidase/xanthine_dehydrogenase,_and_XdhC-_CoxI


id: CL:6496
description: Purine metabolism, and Allantoin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6496_Purine_metabolism,_and_Allantoin_metabolic_process


id: CL:6509
description: Mixed, incl. Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6509_Mixed,_incl._Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:6520
description: Mixed, incl. XdhC- CoxI, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6520_Mixed,_incl._XdhC-_CoxI,_and_[2Fe-2S]-binding


id: CL:6534
description: Mixed, incl. MafB19-like deaminase, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6534_Mixed,_incl._MafB19-like_deaminase,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:6543
description: Mixed, incl. Nucleoside transport, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6543_Mixed,_incl._Nucleoside_transport,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:6552
description: Mixed, incl. Nucleus, and Metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6552_Mixed,_incl._Nucleus,_and_Metal_ion_transmembrane_transporter_activity


id: CL:6554
description: Mixed, incl. Memo-like protein, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6554_Mixed,_incl._Memo-like_protein,_and_MgtC_family


id: CL:6556
description: Mixed, incl. Memo-like protein, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6556_Mixed,_incl._Memo-like_protein,_and_MgtC_family


id: CL:656
description: UmuC domain, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:656_UmuC_domain,_and_Peptidase_S24-like


id: CL:6579
description: Mixed, incl. Ribonucleotide catabolic process, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6579_Mixed,_incl._Ribonucleotide_catabolic_process,_and_FecR_protein


id: CL:6581
description: Mixed, incl. Toxin-antitoxin complex, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6581_Mixed,_incl._Toxin-antitoxin_complex,_and_Sulfite_exporter_TauE/SafE


id: CL:6601
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6601_Mostly_uncharacterized,_incl._Methyltransferase_domain,_and_Metal_ion_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Methyltransferase domain, and Metal ion transmembrane transporter activity


id: CL:6602
description: Mostly uncharacterized, incl. Zinc ion transport, and Mycolic acid cyclopropane synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6602_Mostly_uncharacterized,_incl._Zinc_ion_transport,_and_Mycolic_acid_cyclopropane_synthase


id: CL:6603
description: Mixed, incl. Mycolic acid cyclopropane synthase, and Cobalamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6603_Mixed,_incl._Mycolic_acid_cyclopropane_synthase,_and_Cobalamin_binding


id: CL:6604
description: Mixed, incl. Mycolic acid cyclopropane synthase, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6604_Mixed,_incl._Mycolic_acid_cyclopropane_synthase,_and_SnoaL-like_domain


id: CL:6607
description: Mixed, incl. SnoaL-like domain, and Glutathione biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6607_Mixed,_incl._SnoaL-like_domain,_and_Glutathione_biosynthetic_process


id: CL:6628
description: Mixed, incl. Periplasmic binding protein, and PilZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6628_Mixed,_incl._Periplasmic_binding_protein,_and_PilZ_domain


id: CL:6640
description: Mixed, incl. Zinc ion transport, and Arm DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6640_Mixed,_incl._Zinc_ion_transport,_and_Arm_DNA-binding_domain


id: CL:6642
description: Mixed, incl. RimK-like ATP-grasp domain, and N-formylglutamate amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6642_Mixed,_incl._RimK-like_ATP-grasp_domain,_and_N-formylglutamate_amidohydrolase


id: CL:6659
description: Mixed, incl. Phosphate ion transport, and Exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6659_Mixed,_incl._Phosphate_ion_transport,_and_Exonuclease


id: CL:666
description: Primosome, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:666_Primosome,_and_Regulation_of_DNA_replication


id: CL:6661
description: Mixed, incl. LOG family, and Transmembrane secretion effector
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6661_Mixed,_incl._LOG_family,_and_Transmembrane_secretion_effector


id: CL:6686
description: Mostly uncharacterized, incl. Alanine racemase, N-terminal, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6686_Mostly_uncharacterized,_incl._Alanine_racemase,_N-terminal,_and_Fluoride_transmembrane_transport


id: CL:6687
description: Mixed, incl. Alanine racemase, N-terminal, and Regulation of response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6687_Mixed,_incl._Alanine_racemase,_N-terminal,_and_Regulation_of_response_to_stress


id: CL:6702
description: Mixed, incl. Fluoride transmembrane transport, and rRNA small subunit methyltransferase I
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6702_Mixed,_incl._Fluoride_transmembrane_transport,_and_rRNA_small_subunit_methyltransferase_I


id: CL:6715
description: Mixed, incl. Pfam phage integrase family, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6715_Mixed,_incl._Pfam_phage_integrase_family,_and_Thylakoid


id: CL:6717
description: Mixed, incl. PUA domain, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6717_Mixed,_incl._PUA_domain,_and_DNA_integration


id: CL:6733
description: Mixed, incl. DNA integration, and Histone-like protein H-NS
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6733_Mixed,_incl._DNA_integration,_and_Histone-like_protein_H-NS


id: CL:6746
description: Mixed, incl. Aerobic electron transport chain, and NmrA-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6746_Mixed,_incl._Aerobic_electron_transport_chain,_and_NmrA-like_family


id: CL:6748
description: Aerobic electron transport chain, and Zinc finger, DksA/TraR C4-type
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6748_Aerobic_electron_transport_chain,_and_Zinc_finger,_DksA/TraR_C4-type


id: CL:6774
description: Mixed, incl. LysR, substrate-binding, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6774_Mixed,_incl._LysR,_substrate-binding,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:6775
description: Mixed, incl. LysR, substrate-binding, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6775_Mixed,_incl._LysR,_substrate-binding,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:6777
description: Mixed, incl. LysR, substrate-binding, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6777_Mixed,_incl._LysR,_substrate-binding,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:6778
description: LysR, substrate-binding, and Major facilitator superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6778_LysR,_substrate-binding,_and_Major_facilitator_superfamily_domain


id: CL:6779
description: LysR, substrate-binding, and NmrA-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6779_LysR,_substrate-binding,_and_NmrA-like_family


id: CL:6862
description: Mixed, incl. Major facilitator superfamily domain, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6862_Mixed,_incl._Major_facilitator_superfamily_domain,_and_Aldo-keto_reductase


id: CL:6864
description: Mixed, incl. Sugar (and other) transporter, and Steroid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6864_Mixed,_incl._Sugar_(and_other)_transporter,_and_Steroid_metabolic_process


id: CL:6888
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6888_Mixed,_incl._HTH_domain_AraC-type,_conserved_site,_and_Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase

description:
  Mixed, incl. HTH domain AraC-type, conserved site, and Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase


id: CL:6890
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6890_HTH_domain_AraC-type,_conserved_site,_and_Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase

description:
  HTH domain AraC-type, conserved site, and Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase


id: CL:6891
description: HTH domain AraC-type, conserved site, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6891_HTH_domain_AraC-type,_conserved_site,_and_Methyltransferase_domain


id: CL:6907
description: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6907_Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase


id: CL:692
description: HhH-GPD domain, and AP endonuclease 1
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:692_HhH-GPD_domain,_and_AP_endonuclease_1


id: CL:6939
description: Mixed, incl. Aminobenzoate degradation, and Major facilitator superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6939_Mixed,_incl._Aminobenzoate_degradation,_and_Major_facilitator_superfamily_domain


id: CL:6941
description: Mixed, incl. Aminobenzoate degradation, and HpaA-like, N-terminal cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6941_Mixed,_incl._Aminobenzoate_degradation,_and_HpaA-like,_N-terminal_cupin_domain


id: CL:6944
description: Mixed, incl. Aminobenzoate degradation, and Aldolase/RraA
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6944_Mixed,_incl._Aminobenzoate_degradation,_and_Aldolase/RraA


id: CL:6946
description: Dioxygenase LigAB, LigA subunit superfamily, and 3-carboxyethylcatechol 2,3-dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6946_Dioxygenase_LigAB,_LigA_subunit_superfamily,_and_3-carboxyethylcatechol_2,3-dioxygenase_activity


id: CL:6988
description: Mixed, incl. GNAT domain, and Tetracyclin repressor-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6988_Mixed,_incl._GNAT_domain,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily


id: CL:6989
description: Mixed, incl. GNAT domain, and ChrR-like cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6989_Mixed,_incl._GNAT_domain,_and_ChrR-like_cupin_domain


id: CL:6991
description: Mixed, incl. GNAT domain, and ChrR-like cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6991_Mixed,_incl._GNAT_domain,_and_ChrR-like_cupin_domain


id: CL:6993
description: Mixed, incl. Nudix N-terminal, and Iron import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:6993_Mixed,_incl._Nudix_N-terminal,_and_Iron_import_into_cell


id: CL:7011
description: ChrR-like cupin domain, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7011_ChrR-like_cupin_domain,_and_C-type_lectin_fold


id: CL:7025
description: Mixed, incl. Sugar transporter, conserved site, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7025_Mixed,_incl._Sugar_transporter,_conserved_site,_and_Phosphonate_and_phosphinate_metabolism


id: CL:7036
description: Mixed, incl. Tetracyclin repressor-like, C-terminal domain superfamily, and HPP family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7036_Mixed,_incl._Tetracyclin_repressor-like,_C-terminal_domain_superfamily,_and_HPP_family


id: CL:7038
description: HPP family, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7038_HPP_family,_and_Coenzyme_F420_binding


id: CL:705
description: Mixed, incl. Four-way junction helicase activity, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:705_Mixed,_incl._Four-way_junction_helicase_activity,_and_Horizontal_gene_transfer


id: CL:7054
description: Tetracyclin repressor-like, C-terminal domain superfamily, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7054_Tetracyclin_repressor-like,_C-terminal_domain_superfamily,_and_PP-loop_family


id: CL:7065
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7065_Mostly_uncharacterized,_incl._RNA_polymerase_sigma-70_like,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mostly uncharacterized, incl. RNA polymerase sigma-70 like, and Biological process involved in interspecies interaction between organisms


id: CL:7066
description: Mostly uncharacterized, incl. Sulfur metabolism, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7066_Mostly_uncharacterized,_incl._Sulfur_metabolism,_and_Regulation_of_cell_killing


id: CL:7067
description: Mostly uncharacterized, incl. DoxX, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7067_Mostly_uncharacterized,_incl._DoxX,_and_Regulation_of_cell_killing


id: CL:7068
description: Mostly uncharacterized, incl. DoxX, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7068_Mostly_uncharacterized,_incl._DoxX,_and_Protein_repair


id: CL:7069
description: Mostly uncharacterized, incl. DoxX, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7069_Mostly_uncharacterized,_incl._DoxX,_and_Protein_repair


id: CL:707
description: Four-way junction helicase activity, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:707_Four-way_junction_helicase_activity,_and_Endodeoxyribonuclease_activity


id: CL:7070
description: Mixed, incl. DoxX, and Flavoprotein WrbA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7070_Mixed,_incl._DoxX,_and_Flavoprotein_WrbA-like


id: CL:7072
description: Mixed, incl. DoxX, and Cellular response to metal ion
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7072_Mixed,_incl._DoxX,_and_Cellular_response_to_metal_ion


id: CL:7084
description: Mixed, incl. DoxX, and Flavoprotein WrbA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7084_Mixed,_incl._DoxX,_and_Flavoprotein_WrbA-like


id: CL:7097
description: Protein repair, and ATPase-coupled lipid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7097_Protein_repair,_and_ATPase-coupled_lipid_transmembrane_transporter_activity


id: CL:7110
description: Mostly uncharacterized, incl. Putative Na+/H+ antiporter, and Glutathione hydrolase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7110_Mostly_uncharacterized,_incl._Putative_Na+/H+_antiporter,_and_Glutathione_hydrolase_complex


id: CL:7111
description: Mostly uncharacterized, incl. Putative Na+/H+ antiporter, and Glutathione hydrolase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7111_Mostly_uncharacterized,_incl._Putative_Na+/H+_antiporter,_and_Glutathione_hydrolase_complex


id: CL:7114
description: Mixed, incl. Putative Na+/H+ antiporter, and Peptidase M14, carboxypeptidase A
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7114_Mixed,_incl._Putative_Na+/H+_antiporter,_and_Peptidase_M14,_carboxypeptidase_A


id: CL:7136
description: Mixed, incl. Fluoride transmembrane transport, and Peptidase C39, bacteriocin processing
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7136_Mixed,_incl._Fluoride_transmembrane_transport,_and_Peptidase_C39,_bacteriocin_processing


id: CL:7151
description: Regulation of cell killing, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7151_Regulation_of_cell_killing,_and_Prokaryotic_cytochrome_b561


id: CL:7166
description: Mostly uncharacterized, incl. Methyltransferase (Class A), and Thioesterase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7166_Mostly_uncharacterized,_incl._Methyltransferase_(Class_A),_and_Thioesterase-like_superfamily


id: CL:7168
description: Mixed, incl. Cytochrome C, and GTPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7168_Mixed,_incl._Cytochrome_C,_and_GTPase_activity


id: CL:7186
description: Mixed, incl. Methyltransferase (Class A), and DNA transformation protein TfoX-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7186_Mixed,_incl._Methyltransferase_(Class_A),_and_DNA_transformation_protein_TfoX-like


id: CL:7197
description: Mixed, incl. RNA polymerase sigma-70 like, and Alkylhydroperoxidase AhpD core
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7197_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Alkylhydroperoxidase_AhpD_core


id: CL:7199
description: Mixed, incl. Alkylhydroperoxidase AhpD core, and Uncharacterised MFS-type transporter YbfB
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7199_Mixed,_incl._Alkylhydroperoxidase_AhpD_core,_and_Uncharacterised_MFS-type_transporter_YbfB


id: CL:720
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:720_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:7211
description: Mixed, incl. Protein of unknown function DUF3106, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7211_Mixed,_incl._Protein_of_unknown_function_DUF3106,_and_RNA_polymerase_sigma-70_like


id: CL:7222
description: Mixed, incl. Translocase, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7222_Mixed,_incl._Translocase,_and_TRAP_transporter_solute_receptor_DctP


id: CL:7223
description: Mixed, incl. Translocase, and ApbE family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7223_Mixed,_incl._Translocase,_and_ApbE_family


id: CL:7224
description: Mixed, incl. Translocase, and RnfH protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7224_Mixed,_incl._Translocase,_and_RnfH_protein


id: CL:7230
description: Mixed, incl. NqrDE/RnfAE, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7230_Mixed,_incl._NqrDE/RnfAE,_and_4Fe-4S_domain


id: CL:7242
description: Mixed, incl. NqrDE/RnfAE, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7242_Mixed,_incl._NqrDE/RnfAE,_and_4Fe-4S_domain


id: CL:7261
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7261_Mixed,_incl._Protein_of_unknown_function_DUF1289,_and_HCCA_isomerase/glutathione_S-transferase_kappa

description:
  Mixed, incl. Protein of unknown function DUF1289, and HCCA isomerase/glutathione S-transferase kappa


id: CL:7278
description: Mixed, incl. ApbE family, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7278_Mixed,_incl._ApbE_family,_and_GtrA-like_protein


id: CL:7296
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7296_TRAP_transporter_solute_receptor_DctP,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit

description:
  TRAP transporter solute receptor DctP, and TRAP C4-dicarboxylate transport system permease DctM subunit


id: CL:7297
description: TRAP transporter solute receptor DctP, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7297_TRAP_transporter_solute_receptor_DctP,_and_C4-dicarboxylate_transport


id: CL:7299
description: TRAP transporter solute receptor DctP, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7299_TRAP_transporter_solute_receptor_DctP,_and_C4-dicarboxylate_transport


id: CL:730
description: Mixed, incl. AAA domain, and Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:730_Mixed,_incl._AAA_domain,_and_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)


id: CL:7302
description: C4-dicarboxylate transport, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7302_C4-dicarboxylate_transport,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:7336
description: Mixed, incl. Double Cache domain 1, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7336_Mixed,_incl._Double_Cache_domain_1,_and_NMT1/THI5_like


id: CL:7345
description: Mostly uncharacterized, incl. Sodium:solute symporter family, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7345_Mostly_uncharacterized,_incl._Sodium:solute_symporter_family,_and_EamA_domain


id: CL:7346
description: Mixed, incl. EamA domain, and Cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7346_Mixed,_incl._EamA_domain,_and_Cell_death


id: CL:7347
description: Mixed, incl. Cell death, and Membrane transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7347_Mixed,_incl._Cell_death,_and_Membrane_transport_protein


id: CL:7348
description: Cell death, and Membrane transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7348_Cell_death,_and_Membrane_transport_protein


id: CL:7359
description: Mixed, incl. EamA-like transporter family, and DNA duplex unwinding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7359_Mixed,_incl._EamA-like_transporter_family,_and_DNA_duplex_unwinding


id: CL:7369
description: Mixed, incl. EamA domain, and Virulence factor BrkB
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7369_Mixed,_incl._EamA_domain,_and_Virulence_factor_BrkB


id: CL:7383
description: Mixed, incl. Sodium:solute symporter family, and Protein of unknown function DUF485
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7383_Mixed,_incl._Sodium:solute_symporter_family,_and_Protein_of_unknown_function_DUF485


id: CL:7384
description: Mixed, incl. Sodium:solute symporter family, and Protein of unknown function DUF485
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7384_Mixed,_incl._Sodium:solute_symporter_family,_and_Protein_of_unknown_function_DUF485


id: CL:7385
description: Mixed, incl. Protein of unknown function DUF485, and Sodium/solute symporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7385_Mixed,_incl._Protein_of_unknown_function_DUF485,_and_Sodium/solute_symporter,_conserved_site


id: CL:7398
description: Domain of unknown function (DUF4212), and Sodium/solute symporter, VC2705 subfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7398_Domain_of_unknown_function_(DUF4212),_and_Sodium/solute_symporter,_VC2705_subfamily


id: CL:7407
description: Mixed, incl. AAA domain, and HI0933-like insert domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7407_Mixed,_incl._AAA_domain,_and_HI0933-like_insert_domain_superfamily


id: CL:741
description: Mixed, incl. Potassium, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:741_Mixed,_incl._Potassium,_and_rRNA_methyltransferase_activity


id: CL:7418
description: Mixed, incl. ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7418_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:7419
description: Mixed, incl. ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7419_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:7420
description: Mixed, incl. ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7420_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:7422
description: Mixed, incl. Adhesin B, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7422_Mixed,_incl._Adhesin_B,_and_ABC_3_transport_family


id: CL:743
description: Mixed, incl. Protein carrier chaperone, and rRNA (guanine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:743_Mixed,_incl._Protein_carrier_chaperone,_and_rRNA_(guanine)_methyltransferase_activity


id: CL:7439
description: Mixed, incl. Zinc chaperone CobW-like, C-terminal, and Response to lipid
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7439_Mixed,_incl._Zinc_chaperone_CobW-like,_C-terminal,_and_Response_to_lipid


id: CL:7448
description: Mixed, incl. LysE type translocator, and Zinc chaperone CobW-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7448_Mixed,_incl._LysE_type_translocator,_and_Zinc_chaperone_CobW-like,_C-terminal


id: CL:7457
description: Mostly uncharacterized, incl. Cytosolic acyl coenzyme A thioester hydrolase, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7457_Mostly_uncharacterized,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_ArsC_family


id: CL:7458
description: Mostly uncharacterized, incl. ArsC family, and Phytase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7458_Mostly_uncharacterized,_incl._ArsC_family,_and_Phytase-like_domain


id: CL:7460
description: Mixed, incl. ArsC family, and Truncated hemoglobin
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7460_Mixed,_incl._ArsC_family,_and_Truncated_hemoglobin


id: CL:7480
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7480_Mixed,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_Protein_secretion_by_the_type_III_secretion_system

description:
  Mixed, incl. Cytosolic acyl coenzyme A thioester hydrolase, and Protein secretion by the type III secretion system


id: CL:7495
description: Mixed, incl. Domain of unknown function DUF403, and Bacterial transglutaminase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7495_Mixed,_incl._Domain_of_unknown_function_DUF403,_and_Bacterial_transglutaminase-like,_N-terminal


id: CL:7498
description: Domain of unknown function DUF403, and Bacterial transglutaminase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7498_Domain_of_unknown_function_DUF403,_and_Bacterial_transglutaminase-like,_N-terminal


id: CL:7511
description: Mixed, incl. FIST N domain, and Organic anion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7511_Mixed,_incl._FIST_N_domain,_and_Organic_anion_transmembrane_transporter_activity


id: CL:7527
description: Mixed, incl. Protein transmembrane transport, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7527_Mixed,_incl._Protein_transmembrane_transport,_and_Extracellular_region


id: CL:7528
description: Mixed, incl. Protein transmembrane transport, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7528_Mixed,_incl._Protein_transmembrane_transport,_and_Extracellular_region


id: CL:7530
description: Mixed, incl. Protein transmembrane transport, and Hcp1-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7530_Mixed,_incl._Protein_transmembrane_transport,_and_Hcp1-like_superfamily


id: CL:7531
description: Protein transmembrane transport, and Hcp1-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7531_Protein_transmembrane_transport,_and_Hcp1-like_superfamily


id: CL:7533
description: Protein transmembrane transport, and Hcp1-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7533_Protein_transmembrane_transport,_and_Hcp1-like_superfamily


id: CL:7535
description: Mixed, incl. IraD/Gp25-like, and TssC1, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7535_Mixed,_incl._IraD/Gp25-like,_and_TssC1,_C-terminal


id: CL:7551
description: Mixed, incl. IcmF-related, and Type VI secretion system TssK
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7551_Mixed,_incl._IcmF-related,_and_Type_VI_secretion_system_TssK


id: CL:7564
description: Protein transmembrane transport, and IraD/Gp25-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7564_Protein_transmembrane_transport,_and_IraD/Gp25-like


id: CL:7566
description: Mixed, incl. TssC1, C-terminal, and Type VI secretion, TssG
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7566_Mixed,_incl._TssC1,_C-terminal,_and_Type_VI_secretion,_TssG


id: CL:7594
description: Mixed, incl. Lysozyme activity, and Phage tail baseplate hub (GPD)
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7594_Mixed,_incl._Lysozyme_activity,_and_Phage_tail_baseplate_hub_(GPD)


id: CL:760
description: Mixed, incl. Potassium transport, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:760_Mixed,_incl._Potassium_transport,_and_NusB_family


id: CL:7616
description: Mostly uncharacterized, incl. psiF repeat, and Macro domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7616_Mostly_uncharacterized,_incl._psiF_repeat,_and_Macro_domain


id: CL:7618
description: Mixed, incl. psiF repeat, and Histone-like protein H-NS
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7618_Mixed,_incl._psiF_repeat,_and_Histone-like_protein_H-NS


id: CL:7630
description: Mixed, incl. Transposase IS66, Orf2, and Transposase TnpC, homeodomain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7630_Mixed,_incl._Transposase_IS66,_Orf2,_and_Transposase_TnpC,_homeodomain


id: CL:7660
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7660_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:7663
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7663_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:7664
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7664_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:7666
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7666_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:7667
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7667_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:7668
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7668_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:7669
description: Branched-chain amino acid transport system / permease component, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7669_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leu/Ile/Val-binding_protein


id: CL:7670
description: Leu/Ile/Val-binding protein, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7670_Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:7672
description: Leu/Ile/Val-binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7672_Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:7695
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7695_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:7704
description: Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7704_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_Leucine_binding


id: CL:7719
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7719_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:772
description: Mixed, incl. glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:772_Mixed,_incl._glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Asp/Glu_racemase


id: CL:7729
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7729_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:7740
description: Urea ABC transporter, substrate-binding protein UrtA-like, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7740_Urea_ABC_transporter,_substrate-binding_protein_UrtA-like,_and_Branched-chain_amino_acid_transport


id: CL:775
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:775_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Ribosomal_protein_L25/Gln-tRNA_synthetase,_N-terminal

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Ribosomal protein L25/Gln-tRNA synthetase, N-terminal


id: CL:7751
description: Fatty acid ligase activity, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7751_Fatty_acid_ligase_activity,_and_ABC_transporter,_permease


id: CL:7769
description: Mostly uncharacterized, incl. Plasmid encoded RepA protein, and Domain of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7769_Mostly_uncharacterized,_incl._Plasmid_encoded_RepA_protein,_and_Domain_of_unknown_function_DUF262


id: CL:7770
description: Mixed, incl. Plasmid encoded RepA protein, and Domain of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7770_Mixed,_incl._Plasmid_encoded_RepA_protein,_and_Domain_of_unknown_function_DUF262


id: CL:7772
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7772_Mixed,_incl._Plasmid_encoded_RepA_protein,_and_Heat_shock_protein_DnaJ,_cysteine-rich_domain_superfamily

description:
  Mixed, incl. Plasmid encoded RepA protein, and Heat shock protein DnaJ, cysteine-rich domain superfamily


id: CL:7789
description: Domain of unknown function DUF262, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7789_Domain_of_unknown_function_DUF262,_and_Proteolysis


id: CL:7801
description: Mostly uncharacterized, incl. Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7801_Mostly_uncharacterized,_incl._Transcription_regulator_HTH,_GntR


id: CL:7825
description: Mixed, incl. Transposase activity, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7825_Mixed,_incl._Transposase_activity,_and_DNA_modification


id: CL:7826
description: Mixed, incl. Transposase activity, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7826_Mixed,_incl._Transposase_activity,_and_DNA_modification


id: CL:7827
description: Mixed, incl. DNA modification, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7827_Mixed,_incl._DNA_modification,_and_Toxin-antitoxin_complex


id: CL:7830
description: DNA modification, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7830_DNA_modification,_and_GIY-YIG_endonuclease


id: CL:7846
description: Mixed, incl. Transposase activity, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7846_Mixed,_incl._Transposase_activity,_and_Helix-turn-helix,_type_11


id: CL:7858
description: Mixed, incl. Transposase activity, and Transposase IS66, Orf2
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7858_Mixed,_incl._Transposase_activity,_and_Transposase_IS66,_Orf2


id: CL:7859
description: Mixed, incl. Transposase activity, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7859_Mixed,_incl._Transposase_activity,_and_Acetyltransferase_(GNAT)_family


id: CL:7872
description: Mixed, incl. Transposase IS66, Orf2, and Transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:7872_Mixed,_incl._Transposase_IS66,_Orf2,_and_Transposase_sub-family


id: CL:793
description: Mixed, incl. Carbohydrate transmembrane transport, and Cytosolic ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:793_Mixed,_incl._Carbohydrate_transmembrane_transport,_and_Cytosolic_ribosome


id: CL:795
description: Import across plasma membrane, and Protein serine/threonine/tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:795_Import_across_plasma_membrane,_and_Protein_serine/threonine/tyrosine_kinase_activity


id: CL:818
description: Mixed, incl. Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:818_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division_site


id: CL:819
description: Mixed, incl. Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:819_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division_site


id: CL:82
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:82_Translation,_and_RNA_metabolic_process


id: CL:821
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:821_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:823
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:823_Regulation_of_cell_shape,_and_Reproduction


id: CL:825
description: Peptidoglycan synthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:825_Peptidoglycan_synthesis,_and_Reproduction


id: CL:828
description: Peptidoglycan synthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:828_Peptidoglycan_synthesis,_and_Reproduction


id: CL:83
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:83_Translation,_and_RNA_metabolic_process


id: CL:830
description: Vancomycin resistance, and Mur ligase, central
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:830_Vancomycin_resistance,_and_Mur_ligase,_central


id: CL:84
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:84_Translation,_and_RNA_metabolic_process


id: CL:85
description: Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:85_Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:861
description: Mixed, incl. Cell cycle protein, and Protein self-association
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:861_Mixed,_incl._Cell_cycle_protein,_and_Protein_self-association


id: CL:872
description: Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:872_Beta-lactamase/transpeptidase-like


id: CL:88
description: Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:88_Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:919
description: Mixed, incl. RNA 3-end processing, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:919_Mixed,_incl._RNA_3-end_processing,_and_RNA_ligase_activity


id: CL:921
description: Mixed, incl. RNA 3-end processing, and Regulation of protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:921_Mixed,_incl._RNA_3-end_processing,_and_Regulation_of_protein_catabolic_process


id: CL:93
description: Ribosomal protein, and ATP synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:93_Ribosomal_protein,_and_ATP_synthesis


id: CL:95
description: Ribosomal protein, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:95_Ribosomal_protein,_and_Regulation_of_translation


id: CL:952
description: Mixed, incl. Protein-L-isoaspartate(D-aspartate) O-methyltransferase, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:952_Mixed,_incl._Protein-L-isoaspartate(D-aspartate)_O-methyltransferase,_and_Sigma-70_region_3


id: CL:962
description: Mixed, incl. Terpenoid backbone biosynthesis, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:962_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_Membrane_assembly


id: CL:963
description: Mixed, incl. Membrane assembly, and Lipid A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:963_Mixed,_incl._Membrane_assembly,_and_Lipid_A_biosynthesis


id: CL:964
description: Mixed, incl. Membrane assembly, and Lipid A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:964_Mixed,_incl._Membrane_assembly,_and_Lipid_A_biosynthesis


id: CL:965
description: Mixed, incl. Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:965_Mixed,_incl._Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:966
description: Mixed, incl. Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:966_Mixed,_incl._Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:968
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:968_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:969
description: Lipopolysaccharide biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:969_Lipopolysaccharide_biosynthesis,_and_SIS_domain


id: CL:97
description: Ribosomal protein, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:97_Ribosomal_protein,_and_Regulation_of_translation


id: CL:99
description: Ribosomal protein, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:99_Ribosomal_protein,_and_Regulation_of_translation


id: CL:993
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_62928_STRINGid_CL:993_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: GO:0000122
description: Negative regulation of transcription by RNA polymerase II
memo: https://amigo.geneontology.org/amigo/term/GO:0000122
golevel: 12
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0000122_Negative_regulation_of_transcription_by_RNA_polymerase_II


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004174
description: Electron-transferring-flavoprotein dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004174
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004174_Electron-transferring-flavoprotein_dehydrogenase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0004808
description: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004808
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0004808_tRNA_(5-methylaminomethyl-2-thiouridylate)-methyltransferase_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008803
description: bis(5-nucleosyl)-tetraphosphatase (symmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008803
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008803_bis(5-nucleosyl)-tetraphosphatase_(symmetrical)_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_62928_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_62928_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016636
description: Oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016636
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016636_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016649
memo: https://amigo.geneontology.org/amigo/term/GO:0016649
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016649_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016669
description: Oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016669
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016669_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_cytochrome_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016677
description: Oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016677
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016677_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors,_nitrogenous_group_as_acceptor


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_62928_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


