# geneInfo

ensembl_gene_id: HMPREF9021_00004
symbol: hscB
gene_biotype: protein_coding
description:
  Fe-S protein assembly co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: HMPREF9021_00012
symbol: EFG31617.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: HMPREF9021_00013
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMPREF9021_00016
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HMPREF9021_00018
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: HMPREF9021_00021
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: HMPREF9021_00026
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: HMPREF9021_00027
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: HMPREF9021_00028
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HMPREF9021_00030
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: HMPREF9021_00032
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF9021_00038
symbol: obg
gene_biotype: protein_coding
description:
  GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF9021_00042
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: HMPREF9021_00052
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMPREF9021_00055
symbol: EFG31660.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase, bacterial; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: HMPREF9021_00068
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF9021_00072
symbol: EFG31677.1
gene_biotype: protein_coding
description:
  RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMPREF9021_00074
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMPREF9021_00076
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF9021_00086
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: HMPREF9021_00088
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF9021_00091
symbol: EFG31696.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: HMPREF9021_00092
symbol: SdhB
gene_biotype: protein_coding
description:
  Succinate dehydrogenase and fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: HMPREF9021_00097
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: HMPREF9021_00099
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: HMPREF9021_00100
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF9021_00101
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: HMPREF9021_00111
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF9021_00115
symbol: EFG31720.2
gene_biotype: protein_coding
description:
  Hypothetical protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: HMPREF9021_00125
symbol: EFG31729.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.


ensembl_gene_id: HMPREF9021_00127
symbol: EFG31730.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF9021_00129
symbol: macB
gene_biotype: protein_coding
description:
  Macrolide export ATP-binding/permease MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: HMPREF9021_00154
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: HMPREF9021_00155
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF9021_00156
symbol: EFG31759.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: HMPREF9021_00157
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF9021_00162
symbol: EFG31765.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: HMPREF9021_00166
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HMPREF9021_00171
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: HMPREF9021_00172
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: HMPREF9021_00173
symbol: EFG31776.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: HMPREF9021_00175
symbol: dsbD
gene_biotype: protein_coding
description:
  Hypothetical protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: HMPREF9021_00176
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: HMPREF9021_00183
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMPREF9021_00186
symbol: potA
gene_biotype: protein_coding
description:
  Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF9021_00187
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF9021_00189
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9021_00192
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMPREF9021_00195
symbol: EFG31797.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: HMPREF9021_00196
symbol: queE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: HMPREF9021_00203
symbol: EFG31804.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: HMPREF9021_00213
symbol: EFG31814.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF9021_00216
symbol: EFG31817.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF9021_00217
symbol: EFG31818.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF9021_00224
symbol: hfq
gene_biotype: protein_coding
description:
  Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: HMPREF9021_00240
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMPREF9021_00243
symbol: EFG31844.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF9021_00245
symbol: lptA
gene_biotype: protein_coding
description:
  Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.


ensembl_gene_id: HMPREF9021_00249
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: HMPREF9021_00250
symbol: rne
gene_biotype: protein_coding
description:
  rne/Rng family ribonuclease; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: HMPREF9021_00252
symbol: EFG31853.2
gene_biotype: protein_coding
description:
  RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF9021_00260
symbol: tadA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF9021_00264
symbol: EFG31864.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HMPREF9021_00265
symbol: EFG31865.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HMPREF9021_00268
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: HMPREF9021_00279
symbol: tsaD
gene_biotype: protein_coding
description:
  Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF9021_00282
symbol: ftsQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: HMPREF9021_00283
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein ftsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: HMPREF9021_00284
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF9021_00293
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid A export ATP-binding/permease MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: HMPREF9021_00296
symbol: EFG31894.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: HMPREF9021_00298
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: HMPREF9021_00300
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMPREF9021_00302
symbol: EFG31900.1
gene_biotype: protein_coding
description:
  Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: HMPREF9021_00304
symbol: EFG31902.2
gene_biotype: protein_coding
description:
  Diaminobutyrate-2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF9021_00307
symbol: ppc
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: HMPREF9021_00308
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: HMPREF9021_00320
symbol: gltS
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: HMPREF9021_00330
symbol: clpS
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: HMPREF9021_00335
symbol: grpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dep [...]


ensembl_gene_id: HMPREF9021_00336
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: HMPREF9021_00340
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMPREF9021_00343
symbol: rsmI
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMPREF9021_00350
symbol: EFG31947.2
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: HMPREF9021_00355
symbol: FabG
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9021_00362
symbol: EFG31958.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMPREF9021_00367
symbol: pepA
gene_biotype: protein_coding
description:
  Hypothetical protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: HMPREF9021_00368
symbol: EFG31964.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: HMPREF9021_00370
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF9021_00371
symbol: EFG31967.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: HMPREF9021_00373
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9021_00380
symbol: zapD
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: HMPREF9021_00381
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF9021_00382
symbol: EFG31978.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: HMPREF9021_00386
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF9021_00388
symbol: EFG31984.2
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF9021_00389
symbol: EJZ50274.1
gene_biotype: protein_coding
description:
  Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.


ensembl_gene_id: HMPREF9021_00396
symbol: lolA
gene_biotype: protein_coding
description:
  Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: HMPREF9021_00399
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMPREF9021_00409
symbol: EFG32004.1
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMPREF9021_00410
symbol: EFG32005.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMPREF9021_00416
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMPREF9021_00421
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HMPREF9021_00423
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: HMPREF9021_00425
symbol: EFG32020.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF9021_00426
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMPREF9021_00427
symbol: EFG32022.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: HMPREF9021_00428
symbol: EFG32023.2
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: HMPREF9021_00429
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: HMPREF9021_00433
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: HMPREF9021_00435
symbol: nuoN
gene_biotype: protein_coding
description:
  Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: HMPREF9021_00446
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: HMPREF9021_00447
symbol: EFG32042.1
gene_biotype: protein_coding
description:
  Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HMPREF9021_00449
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HMPREF9021_00452
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: HMPREF9021_00453
symbol: EFG32048.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone), G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: HMPREF9021_00456
symbol: EFG32051.1
gene_biotype: protein_coding
description:
  NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: HMPREF9021_00461
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: HMPREF9021_00462
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: HMPREF9021_00464
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HMPREF9021_00465
symbol: nuoA
gene_biotype: protein_coding
description:
  Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: HMPREF9021_00466
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF9021_00468
symbol: clpB
gene_biotype: protein_coding
description:
  Chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMPREF9021_00476
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: HMPREF9021_00477
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HMPREF9021_00478
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF9021_00479
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF9021_00489
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: HMPREF9021_00491
symbol: EFG32085.1
gene_biotype: protein_coding
description:
  ModE molybdate transport repressor domain-containing protein; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF9021_00493
symbol: EFG32087.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: HMPREF9021_00502
symbol: prpB
gene_biotype: protein_coding
description:
  Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: HMPREF9021_00504
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: HMPREF9021_00515
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: HMPREF9021_00518
symbol: rlmH
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HMPREF9021_00519
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: HMPREF9021_00535
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: HMPREF9021_00537
symbol: EFG31269.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: HMPREF9021_00539
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: HMPREF9021_00544
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF9021_00550
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF9021_00559
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: HMPREF9021_00560
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: HMPREF9021_00562
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF9021_00564
symbol: EFG31296.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: HMPREF9021_00565
symbol: EFG31297.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: HMPREF9021_00567
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: HMPREF9021_00574
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HMPREF9021_00576
symbol: anmK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: HMPREF9021_00577
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: HMPREF9021_00578
symbol: EFG31310.1
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: HMPREF9021_00582
symbol: EFG31314.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: HMPREF9021_00585
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HMPREF9021_00586
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HMPREF9021_00594
symbol: EFG31326.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: HMPREF9021_00600
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: HMPREF9021_00611
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: HMPREF9021_00612
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: HMPREF9021_00617
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...]


ensembl_gene_id: HMPREF9021_00627
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF9021_00631
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF9021_00637
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF9021_00638
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF9021_00658
symbol: EFG31389.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: HMPREF9021_00669
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: HMPREF9021_00670
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: HMPREF9021_00671
symbol: EFG31402.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: HMPREF9021_00672
symbol: EFG31403.1
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: HMPREF9021_00675
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: HMPREF9021_00676
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF9021_00678
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: HMPREF9021_00679
symbol: EFG31410.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: HMPREF9021_00680
symbol: EFG31411.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: HMPREF9021_00682
symbol: EFG31413.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMPREF9021_00690
symbol: EFG31420.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: HMPREF9021_00691
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF9021_00698
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: HMPREF9021_00700
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; Belongs to the UvrB family.  In the N-terminal section; belongs to the UvrB family.


ensembl_gene_id: HMPREF9021_00702
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HMPREF9021_00707
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMPREF9021_00708
symbol: rsgA
gene_biotype: protein_coding
description:
  Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMPREF9021_00709
symbol: EFG31439.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: HMPREF9021_00711
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF9021_00720
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMPREF9021_00721
symbol: ftsB
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: HMPREF9021_00726
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: HMPREF9021_00736
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMPREF9021_00790
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF9021_00794
symbol: lapB
gene_biotype: protein_coding
description:
  Hypothetical protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: HMPREF9021_00796
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF9021_00797
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: HMPREF9021_00800
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: HMPREF9021_00802
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: HMPREF9021_00807
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF9021_00808
symbol: pyrI
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase.


ensembl_gene_id: HMPREF9021_00813
symbol: der
gene_biotype: protein_coding
description:
  GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF9021_00814
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: HMPREF9021_00816
symbol: metXS
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.


ensembl_gene_id: HMPREF9021_00817
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase 1; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMPREF9021_00826
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMPREF9021_00830
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9021_00841
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMPREF9021_00842
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: HMPREF9021_00850
symbol: EFG31578.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: HMPREF9021_00862
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: HMPREF9021_00869
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: HMPREF9021_00871
symbol: EFG31595.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: HMPREF9021_00893
symbol: EFG31065.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: HMPREF9021_00894
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: HMPREF9021_00895
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: HMPREF9021_00900
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMPREF9021_00905
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMPREF9021_00908
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMPREF9021_00909
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: HMPREF9021_00924
symbol: rdgC
gene_biotype: protein_coding
description:
  Recombination-associated protein rdgC; May be involved in recombination; Belongs to the RdgC family.


ensembl_gene_id: HMPREF9021_00928
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF9021_00929
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF9021_00930
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: HMPREF9021_00939
symbol: EFG31110.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: HMPREF9021_00940
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HMPREF9021_00941
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor greB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: HMPREF9021_00944
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF9021_00946
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF9021_00948
symbol: EFG31119.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: HMPREF9021_00949
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF9021_00951
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF9021_00955
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: HMPREF9021_00959
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF9021_00960
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: HMPREF9021_00962
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF9021_00965
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HMPREF9021_00971
symbol: cas9
gene_biotype: protein_coding
description:
  CRISPR-associated protein cas9/csn1, subtype II/nmemi; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3  [...]


ensembl_gene_id: HMPREF9021_00978
symbol: EFG31146.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HMPREF9021_00980
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: HMPREF9021_00985
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF9021_00986
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF9021_00988
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF9021_00989
symbol: EFG31157.1
gene_biotype: protein_coding
description:
  RNAse H-fold protein YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HMPREF9021_00991
symbol: ubiX
gene_biotype: protein_coding
description:
  Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: HMPREF9021_00994
symbol: EFG31162.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: HMPREF9021_00997
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: HMPREF9021_01001
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HMPREF9021_01003
symbol: cyaY
gene_biotype: protein_coding
description:
  Iron donor protein CyaY; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: HMPREF9021_01005
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: HMPREF9021_01008
symbol: msrA
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMPREF9021_01020
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: HMPREF9021_01022
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HMPREF9021_01023
symbol: EFG31191.2
gene_biotype: protein_coding
description:
  TrkH family potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: HMPREF9021_01028
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: HMPREF9021_01032
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: HMPREF9021_01038
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: HMPREF9021_01042
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: HMPREF9021_01047
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: HMPREF9021_01053
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: HMPREF9021_01063
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HMPREF9021_01068
symbol: coaX
gene_biotype: protein_coding
description:
  biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: HMPREF9021_01071
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF9021_01072
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF9021_01081
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HMPREF9021_01084
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: HMPREF9021_01088
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: HMPREF9021_01095
symbol: EFG30867.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMPREF9021_01097
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HMPREF9021_01098
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF9021_01099
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF9021_01103
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: HMPREF9021_01104
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: HMPREF9021_01106
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: HMPREF9021_01108
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: HMPREF9021_01111
symbol: recA
gene_biotype: protein_coding
description:
  Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF9021_01112
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF9021_01115
symbol: EFG30887.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMPREF9021_01118
symbol: nagZ
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: HMPREF9021_01123
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: HMPREF9021_01136
symbol: glnE
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB [...]


ensembl_gene_id: HMPREF9021_01137
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF9021_01138
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF9021_01139
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMPREF9021_01142
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: HMPREF9021_01143
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: HMPREF9021_01156
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: HMPREF9021_01157
symbol: tatB
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: HMPREF9021_01158
symbol: tatA
gene_biotype: protein_coding
description:
  TatA/E family twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: HMPREF9021_01162
symbol: EFG30934.2
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMPREF9021_01167
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: HMPREF9021_01170
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF9021_01172
symbol: EFG30944.1
gene_biotype: protein_coding
description:
  Putative type I restriction enzyme HindVIIP R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: HMPREF9021_01176
symbol: EFG30948.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF9021_01178
symbol: EFG30950.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: HMPREF9021_01182
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF9021_01183
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: HMPREF9021_01185
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF9021_01190
symbol: EFG30962.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: HMPREF9021_01191
symbol: EFG30963.2
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: HMPREF9021_01192
symbol: EFG30964.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HMPREF9021_01193
symbol: EFG30965.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HMPREF9021_01219
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: HMPREF9021_01228
symbol: EFG31000.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: HMPREF9021_01238
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HMPREF9021_01239
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: HMPREF9021_01240
symbol: EFG31012.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: HMPREF9021_01245
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF9021_01246
symbol: EFG31018.1
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF9021_01255
symbol: EFG31027.1
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: HMPREF9021_01258
symbol: EFG31030.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: HMPREF9021_01260
symbol: glnD
gene_biotype: protein_coding
description:
  protein-P-II uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: HMPREF9021_01261
symbol: EFG31033.1
gene_biotype: protein_coding
description:
  Superoxide dismutase [Mn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: HMPREF9021_01262
symbol: EFG31034.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: HMPREF9021_01263
symbol: EFG31035.2
gene_biotype: protein_coding
description:
  Betaine/carnitine/choline transporter (BCCT) family transporter; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: HMPREF9021_01266
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: HMPREF9021_01267
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HMPREF9021_01270
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMPREF9021_01271
symbol: EFG31043.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: HMPREF9021_01273
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMPREF9021_01281
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF9021_01301
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF9021_01303
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: HMPREF9021_01306
symbol: aroQ
gene_biotype: protein_coding
description:
  Catabolic 3-dehydroquinase 1; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: HMPREF9021_01307
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: HMPREF9021_01316
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: HMPREF9021_01323
symbol: lptE
gene_biotype: protein_coding
description:
  Hypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.


ensembl_gene_id: HMPREF9021_01326
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HMPREF9021_01327
symbol: EFG30721.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: HMPREF9021_01332
symbol: EFG30726.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF9021_01339
symbol: gluQ
gene_biotype: protein_coding
description:
  glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: HMPREF9021_01341
symbol: EFG30735.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HMPREF9021_01347
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HMPREF9021_01348
symbol: EFG30742.2
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF9021_01350
symbol: EFG30744.1
gene_biotype: protein_coding
description:
  NifU-like protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: HMPREF9021_01355
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: HMPREF9021_01358
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF9021_01365
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: HMPREF9021_01366
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: HMPREF9021_01370
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: HMPREF9021_01372
symbol: rpoH
gene_biotype: protein_coding
description:
  Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: HMPREF9021_01373
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HMPREF9021_01376
symbol: EFG30770.1
gene_biotype: protein_coding
description:
  RfaE, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: HMPREF9021_01377
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF9021_01378
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: HMPREF9021_01383
symbol: EFG30777.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: HMPREF9021_01386
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HMPREF9021_01387
symbol: EFG30781.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF9021_01396
symbol: EFG30790.2
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: HMPREF9021_01399
symbol: EFG30793.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: HMPREF9021_01400
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HMPREF9021_01402
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: HMPREF9021_01404
symbol: EFG30798.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.


ensembl_gene_id: HMPREF9021_01405
symbol: EFG30799.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: HMPREF9021_01412
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: HMPREF9021_01413
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9021_01414
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: HMPREF9021_01415
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9021_01416
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: HMPREF9021_01417
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: HMPREF9021_01418
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: HMPREF9021_01419
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMPREF9021_01423
symbol: EFG30817.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: HMPREF9021_01425
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: HMPREF9021_01429
symbol: EFG30823.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: HMPREF9021_01436
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: HMPREF9021_01438
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF9021_01447
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF9021_01455
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (guanosine-2'-O-)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.


ensembl_gene_id: HMPREF9021_01457
symbol: EFG30851.1
gene_biotype: protein_coding
description:
  2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: HMPREF9021_01464
symbol: EFG30858.1
gene_biotype: protein_coding
description:
  Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: HMPREF9021_01472
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: HMPREF9021_01474
symbol: EFG30507.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: HMPREF9021_01478
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF9021_01479
symbol: sstT
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HMPREF9021_01480
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: HMPREF9021_01485
symbol: lptD
gene_biotype: protein_coding
description:
  Hypothetical protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: HMPREF9021_01491
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF9021_01502
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF9021_01505
symbol: EFG30537.1
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: HMPREF9021_01510
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and  [...]


ensembl_gene_id: HMPREF9021_01511
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: HMPREF9021_01512
symbol: EFG30544.2
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: HMPREF9021_01519
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: HMPREF9021_01524
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMPREF9021_01530
symbol: EFG30561.2
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9021_01531
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine-fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: HMPREF9021_01533
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF9021_01534
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF9021_01536
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: HMPREF9021_01541
symbol: EFG30572.1
gene_biotype: protein_coding
description:
  Putative protein insertion permease FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: HMPREF9021_01542
symbol: ftsE
gene_biotype: protein_coding
description:
  Type II (General) Secretory Pathway (IISP) Family protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: HMPREF9021_01547
symbol: EFG30578.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: HMPREF9021_01559
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: HMPREF9021_01560
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF9021_01562
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF9021_01563
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF9021_01564
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF9021_01565
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF9021_01566
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9021_01595
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF9021_01601
symbol: EFG30631.1
gene_biotype: protein_coding
description:
  drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter; Belongs to the major facilitator superfamily.


ensembl_gene_id: HMPREF9021_01602
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF9021_01603
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMPREF9021_01604
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF9021_01605
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: HMPREF9021_01606
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF9021_01607
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF9021_01608
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF9021_01609
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF9021_01611
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF9021_01612
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF9021_01613
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF9021_01615
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF9021_01616
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF9021_01617
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF9021_01618
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9021_01622
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: HMPREF9021_01624
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMPREF9021_01625
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF9021_01626
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF9021_01627
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF9021_01628
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF9021_01629
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF9021_01631
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMPREF9021_01632
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: HMPREF9021_01640
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: HMPREF9021_01662
symbol: EFG30376.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMPREF9021_01666
symbol: mtnN
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMPREF9021_01667
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: HMPREF9021_01673
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF9021_01675
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9021_01676
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HMPREF9021_01679
symbol: EFG30393.1
gene_biotype: protein_coding
description:
  rdgB/HAM1 family non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMPREF9021_01682
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HMPREF9021_01686
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: HMPREF9021_01693
symbol: EFG30407.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HMPREF9021_01695
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase 4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: HMPREF9021_01699
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: HMPREF9021_01709
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: HMPREF9021_01725
symbol: EFG30438.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: HMPREF9021_01726
symbol: prmB
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: HMPREF9021_01728
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF9021_01730
symbol: folD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF9021_01734
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: HMPREF9021_01735
symbol: EFG30448.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: HMPREF9021_01737
symbol: EFG30450.1
gene_biotype: protein_coding
description:
  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC domain; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: HMPREF9021_01738
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: HMPREF9021_01739
symbol: EFG30452.1
gene_biotype: protein_coding
description:
  YbaB/EbfC family DNA-binding protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF9021_01762
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF9021_01796
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF9021_01797
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF9021_01798
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF9021_01801
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HMPREF9021_01803
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF9021_01805
symbol: psd-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: HMPREF9021_01826
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: HMPREF9021_01827
symbol: EFG30330.1
gene_biotype: protein_coding
description:
  Prepilin-type N-terminal cleavage/methylation domain-containing protein; Belongs to the N-Me-Phe pilin family.


ensembl_gene_id: HMPREF9021_01831
symbol: EFG30334.1
gene_biotype: protein_coding
description:
  Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: HMPREF9021_01837
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: HMPREF9021_01840
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: HMPREF9021_01842
symbol: EFG30345.1
gene_biotype: protein_coding
description:
  1-acylglycerol-3-phosphate O-acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: HMPREF9021_01858
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: HMPREF9021_01864
symbol: EFG30236.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: HMPREF9021_01873
symbol: ybeY
gene_biotype: protein_coding
description:
  Metalloprotein, YbeY/UPF0054family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMPREF9021_01874
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HMPREF9021_01879
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: HMPREF9021_01887
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...]


ensembl_gene_id: HMPREF9021_01894
symbol: secB
gene_biotype: protein_coding
description:
  Protein-export protein secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: HMPREF9021_01895
symbol: EFG30267.1
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: HMPREF9021_01897
symbol: EFG30269.2
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMPREF9021_01898
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF9021_01902
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMPREF9021_01903
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF9021_01906
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: HMPREF9021_01918
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: HMPREF9021_01938
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: HMPREF9021_01942
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9021_01945
symbol: cca
gene_biotype: protein_coding
description:
  Multifunctional CCA protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: HMPREF9021_01953
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF9021_01954
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: HMPREF9021_01957
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMPREF9021_01962
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMPREF9021_01963
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: HMPREF9021_01965
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HMPREF9021_01968
symbol: EFG30199.1
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMPREF9021_02005
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: HMPREF9021_02007
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HMPREF9021_02009
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF9021_02010
symbol: nnrD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: HMPREF9021_02011
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMPREF9021_02014
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HMPREF9021_02015
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: HMPREF9021_02017
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HMPREF9021_02018
symbol: bamE
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HMPREF9021_02025
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9021_02026
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HMPREF9021_02027
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: HMPREF9021_02028
symbol: hslO
gene_biotype: protein_coding
description:
  Chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: HMPREF9021_02032
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: HMPREF9021_02036
symbol: EFG30131.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: HMPREF9021_02038
symbol: trmL
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 2; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: HMPREF9021_02039
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: HMPREF9021_02046
symbol: EFG30140.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF9021_02047
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMPREF9021_02048
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: HMPREF9021_02053
symbol: EFG30147.2
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: HMPREF9021_02066
symbol: xerC
gene_biotype: protein_coding
description:
  Hypothetical protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF9021_02068
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: HMPREF9021_02073
symbol: EFG30079.1
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMPREF9021_02074
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMPREF9021_02083
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase, YidC/Oxa1 family domain; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: HMPREF9021_02084
symbol: EFG30090.1
gene_biotype: protein_coding
description:
  UPF0161 protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: HMPREF9021_02085
symbol: EFG30091.2
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF9021_02088
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: HMPREF9021_02135
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMPREF9021_02137
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HMPREF9021_02153
symbol: EFG30014.2
gene_biotype: protein_coding
description:
  Lactate permease (LctP) family transporter; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HMPREF9021_02165
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: HMPREF9021_02171
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: HMPREF9021_02172
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: HMPREF9021_02191
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: HMPREF9021_02199
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: HMPREF9021_02201
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: HMPREF9021_02205
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF9021_02206
symbol: hscA
gene_biotype: protein_coding
description:
  Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: HMPREF9021_02208
symbol: dusC
gene_biotype: protein_coding
description:
  nifR3 family putative TIM-barrel protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: HMPREF9021_02216
symbol: vapC
gene_biotype: protein_coding
description:
  Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: HMPREF9021_02305
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: HMPREF9021_02307
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: HMPREF9021_02488
symbol: EJZ50282.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: HMPREF9021_02536
symbol: EJZ50232.1
gene_biotype: protein_coding
description:
  P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.


ensembl_gene_id: HMPREF9021_02548
symbol: aroK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HMPREF9021_02549
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: HMPREF9021_02555
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMPREF9021_02582
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transporter CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: HMPREF9021_02596
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF9021_02600
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: HMPREF9021_02606
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMPREF9021_02607
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HMPREF9021_02649
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: HMPREF9021_02669
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


# pathwayInfo

id: CL:1008
description: NADH dehydrogenase activity, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1008_NADH_dehydrogenase_activity,_and_Peptidase_M16,_N-terminal


id: CL:1012
description: ATP synthesis coupled electron transport, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1012_ATP_synthesis_coupled_electron_transport,_and_Quinone


id: CL:1038
description: Peptidase M16, N-terminal, and Ubiquinol-cytochrome-c reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1038_Peptidase_M16,_N-terminal,_and_Ubiquinol-cytochrome-c_reductase_activity


id: CL:1067
description: Mixed, incl. Fatty acid biosynthetic process, and Secondary metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1067_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Secondary_metabolic_process


id: CL:1071
description: Mixed, incl. Phosphopantetheine, and HotDog domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1071_Mixed,_incl._Phosphopantetheine,_and_HotDog_domain_superfamily


id: CL:1072
description: Mixed, incl. Phosphopantetheine, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1072_Mixed,_incl._Phosphopantetheine,_and_AMP-binding_enzyme


id: CL:1083
description: Mixed, incl. FAD-binding domain, and Outer membrane lipoprotein carrier protein LolA
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1083_Mixed,_incl._FAD-binding_domain,_and_Outer_membrane_lipoprotein_carrier_protein_LolA


id: CL:1118
description: Mixed, incl. Lactate metabolic process, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1118_Mixed,_incl._Lactate_metabolic_process,_and_Lipid_oxidation


id: CL:1121
description: Electron transfer flavoprotein domain, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1121_Electron_transfer_flavoprotein_domain,_and_Lipid_oxidation


id: CL:113
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:113_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1135
description: Lactate metabolic process, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1135_Lactate_metabolic_process,_and_Cysteine-rich_domain


id: CL:114
description: Mixed, incl. Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:114_Mixed,_incl._Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1154
description: Mixed, incl. Carbohydrate catabolic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1154_Mixed,_incl._Carbohydrate_catabolic_process,_and_Pentose_phosphate_pathway


id: CL:1156
description: Mixed, incl. Carbohydrate catabolic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1156_Mixed,_incl._Carbohydrate_catabolic_process,_and_NADPH_regeneration


id: CL:1157
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1157_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:1159
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1159_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1161
description: Glycolysis, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1161_Glycolysis,_and_Glucose_metabolic_process


id: CL:1188
description: Gluconate utilization, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1188_Gluconate_utilization,_and_NADPH_regeneration


id: CL:1209
description: Glycogen biosynthesis, and Immunoglobulin E-set
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1209_Glycogen_biosynthesis,_and_Immunoglobulin_E-set


id: CL:1239
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1239_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1241
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1241_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1242
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1242_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1243
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1243_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1246
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1246_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1247
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1247_Cell_shape,_and_Cell_division_site


id: CL:1305
description: Peptidase M23, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1305_Peptidase_M23,_and_ABC3_transporter_permease_protein_domain


id: CL:1319
description: Mixed, incl. Peptidoglycan turnover, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1319_Mixed,_incl._Peptidoglycan_turnover,_and_Peptide_binding


id: CL:1320
description: Mixed, incl. Peptide binding, and Aminoglycoside phosphotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1320_Mixed,_incl._Peptide_binding,_and_Aminoglycoside_phosphotransferase


id: CL:1329
description: Peptidoglycan turnover, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1329_Peptidoglycan_turnover,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:1346
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1346_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Horizontal_gene_transfer


id: CL:1348
description: tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1348_tRNA_threonylcarbamoyladenosine_modification


id: CL:137
description: Mixed, incl. Ribosomal protein L2, domain 2, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:137_Mixed,_incl._Ribosomal_protein_L2,_domain_2,_and_Small_ribosomal_subunit


id: CL:1372
description: Mostly uncharacterized, incl. DHHA1 domain, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1372_Mostly_uncharacterized,_incl._DHHA1_domain,_and_Deacetylase_activity


id: CL:1374
description: Mixed, incl. DHHA1 domain, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1374_Mixed,_incl._DHHA1_domain,_and_Deacetylase_activity


id: CL:1395
description: Mostly uncharacterized, incl. TatD related DNase, and Inositol monophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1395_Mostly_uncharacterized,_incl._TatD_related_DNase,_and_Inositol_monophosphatase-like


id: CL:1397
description: Mostly uncharacterized, incl. BolA protein, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1397_Mostly_uncharacterized,_incl._BolA_protein,_and_TatD_related_DNase


id: CL:1399
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1399_Mixed,_incl._Negative_regulation_of_catalytic_activity,_and_Molybdopterin_synthase/thiamin_biosynthesis_sulphur_carrier,_beta-grasp

description:
  Mixed, incl. Negative regulation of catalytic activity, and Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


id: CL:1427
description: Mixed, incl. Maf-like protein, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1427_Mixed,_incl._Maf-like_protein,_and_TatD_related_DNase


id: CL:1439
description: Isoprenoid metabolic process, and Squalene/phytoene synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1439_Isoprenoid_metabolic_process,_and_Squalene/phytoene_synthase


id: CL:1457
description: Isoprenoid synthase domain superfamily, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1457_Isoprenoid_synthase_domain_superfamily,_and_FAD_dependent_oxidoreductase


id: CL:1480
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1480_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_RNA_capping


id: CL:1482
description: Nicotinamide nucleotide biosynthetic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1482_Nicotinamide_nucleotide_biosynthetic_process,_and_RNA_capping


id: CL:1498
description: Mixed, incl. ABC-2 transporter, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1498_Mixed,_incl._ABC-2_transporter,_and_Protein_acylation


id: CL:1512
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, conserved site, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1512_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_conserved_site,_and_Chromosome_segregation


id: CL:1514
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, conserved site, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1514_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_conserved_site,_and_Chromosome_segregation


id: CL:1515
description: Pseudouridine synthase, RsuA/RluB/E/F, conserved site, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1515_Pseudouridine_synthase,_RsuA/RluB/E/F,_conserved_site,_and_Chromosome_segregation


id: CL:1528
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1528_Mixed,_incl._GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1,_and_Pseudouridine_synthase,_RsuA/RluB/E/F,_conserved_site

description:
  Mixed, incl. GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1, and Pseudouridine synthase, RsuA/RluB/E/F, conserved site


id: CL:1541
description: Mixed, incl. Conserved hypothetical protein 95, and Protein complex oligomerization
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1541_Mixed,_incl._Conserved_hypothetical_protein_95,_and_Protein_complex_oligomerization


id: CL:1555
description: Mixed, incl. Macromolecule localization, and Catalytic activity, acting on a protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1555_Mixed,_incl._Macromolecule_localization,_and_Catalytic_activity,_acting_on_a_protein


id: CL:1556
description: Mixed, incl. Macromolecule localization, and Catalytic activity, acting on a protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1556_Mixed,_incl._Macromolecule_localization,_and_Catalytic_activity,_acting_on_a_protein


id: CL:1557
description: Mixed, incl. Macromolecule localization, and Catalytic activity, acting on a protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1557_Mixed,_incl._Macromolecule_localization,_and_Catalytic_activity,_acting_on_a_protein


id: CL:1558
description: Mixed, incl. Macromolecule localization, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1558_Mixed,_incl._Macromolecule_localization,_and_Membrane


id: CL:1560
description: Mixed, incl. Macromolecule localization, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1560_Mixed,_incl._Macromolecule_localization,_and_Membrane


id: CL:1561
description: Mixed, incl. Cell envelope, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1561_Mixed,_incl._Cell_envelope,_and_Intrinsic_component_of_membrane


id: CL:1562
description: Mixed, incl. Cell envelope, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1562_Mixed,_incl._Cell_envelope,_and_Intrinsic_component_of_membrane


id: CL:1563
description: Mixed, incl. Cell envelope, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1563_Mixed,_incl._Cell_envelope,_and_Intrinsic_component_of_membrane


id: CL:1564
description: Mixed, incl. Cell envelope, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1564_Mixed,_incl._Cell_envelope,_and_Lipoprotein


id: CL:1565
description: Mostly uncharacterized, incl. Intrinsic component of plasma membrane, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1565_Mostly_uncharacterized,_incl._Intrinsic_component_of_plasma_membrane,_and_Cell_outer_membrane


id: CL:1567
description: Mostly uncharacterized, incl. Intrinsic component of plasma membrane, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1567_Mostly_uncharacterized,_incl._Intrinsic_component_of_plasma_membrane,_and_Cell_outer_membrane


id: CL:1568
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1568_Mostly_uncharacterized,_incl._Intrinsic_component_of_plasma_membrane,_and_Gram-negative-bacterium-type_cell_outer_membrane_assembly

description:
  Mostly uncharacterized, incl. Intrinsic component of plasma membrane, and Gram-negative-bacterium-type cell outer membrane assembly


id: CL:1569
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1569_Mixed,_incl._Intrinsic_component_of_plasma_membrane,_and_Gram-negative-bacterium-type_cell_outer_membrane_assembly

description:
  Mixed, incl. Intrinsic component of plasma membrane, and Gram-negative-bacterium-type cell outer membrane assembly


id: CL:1570
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1570_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex

description:
  Mostly uncharacterized, incl. Lipopolysaccharide transport, and ATP-binding cassette (ABC) transporter complex


id: CL:1572
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1572_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex

description:
  Mostly uncharacterized, incl. Lipopolysaccharide transport, and ATP-binding cassette (ABC) transporter complex


id: CL:1573
description: Mostly uncharacterized, incl. Protein glycosylation, and Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1573_Mostly_uncharacterized,_incl._Protein_glycosylation,_and_Tetrapyrrole_biosynthetic_process


id: CL:1575
description: Mixed, incl. Protein glycosylation, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1575_Mixed,_incl._Protein_glycosylation,_and_Protein_secretion


id: CL:1578
description: Mixed, incl. Protein glycosylation, and D-gluconate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1578_Mixed,_incl._Protein_glycosylation,_and_D-gluconate_catabolic_process


id: CL:1582
description: Mixed, incl. Mannosylation, and Cilium or flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1582_Mixed,_incl._Mannosylation,_and_Cilium_or_flagellum-dependent_cell_motility


id: CL:1622
description: Lipopolysaccharide transport, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1622_Lipopolysaccharide_transport,_and_Permease_LptG/LptF-related


id: CL:1647
description: Mixed, incl. Tetratricopeptide repeats, and External side of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1647_Mixed,_incl._Tetratricopeptide_repeats,_and_External_side_of_plasma_membrane


id: CL:1658
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Ubiquinone biosynthesis complex
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1658_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Ubiquinone_biosynthesis_complex


id: CL:1669
description: Mixed, incl. Cytochrome complex assembly, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1669_Mixed,_incl._Cytochrome_complex_assembly,_and_RDD_family


id: CL:1670
description: Mixed, incl. Cytochrome complex assembly, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1670_Mixed,_incl._Cytochrome_complex_assembly,_and_RDD_family


id: CL:1683
description: Mixed, incl. Ribonuclease II/R, and PPIC-type PPIASE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1683_Mixed,_incl._Ribonuclease_II/R,_and_PPIC-type_PPIASE_domain


id: CL:1704
description: Mixed, incl. Localization within membrane, and PDZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1704_Mixed,_incl._Localization_within_membrane,_and_PDZ_domain


id: CL:1706
description: Lipoprotein, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1706_Lipoprotein,_and_Protein_insertion_into_membrane


id: CL:1707
description: Protein insertion into membrane, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1707_Protein_insertion_into_membrane,_and_Pore_complex


id: CL:1718
description: Lipoprotein transport, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1718_Lipoprotein_transport,_and_Lipoprotein_metabolic_process


id: CL:1741
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Peptidase S1, PA clan
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1741_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Peptidase_S1,_PA_clan


id: CL:1754
description: Mixed, incl. Thioredoxin-like fold, and Spermine/spermidine synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1754_Mixed,_incl._Thioredoxin-like_fold,_and_Spermine/spermidine_synthase_domain


id: CL:1766
description: Mixed, incl. Lytic endotransglycosylase activity, and rRNA (guanine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1766_Mixed,_incl._Lytic_endotransglycosylase_activity,_and_rRNA_(guanine)_methyltransferase_activity


id: CL:1780
description: Mixed, incl. Phospholipid transport, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1780_Mixed,_incl._Phospholipid_transport,_and_TAT_protein_transport_complex


id: CL:1782
description: Phospholipid transport, and CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1782_Phospholipid_transport,_and_CoA_hydrolase_activity


id: CL:1820
description: Mixed, incl. GMP salvage, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1820_Mixed,_incl._GMP_salvage,_and_Methyltransferase_small_domain


id: CL:183
description: Mixed, incl. Zinc-binding ribosomal protein, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:183_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_Ribosomal_large_subunit_assembly


id: CL:1833
description: Mostly uncharacterized, incl. BON domain, and Glutathione transferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1833_Mostly_uncharacterized,_incl._BON_domain,_and_Glutathione_transferase_family


id: CL:1835
description: Mixed, incl. Glutathione transferase family, and Negative regulation of cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1835_Mixed,_incl._Glutathione_transferase_family,_and_Negative_regulation_of_cell_death


id: CL:1855
description: Mixed, incl. PP-loop family, and Regulation of locomotion
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1855_Mixed,_incl._PP-loop_family,_and_Regulation_of_locomotion


id: CL:1867
description: Mixed, incl. SEC-C motif, and Monocarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1867_Mixed,_incl._SEC-C_motif,_and_Monocarboxylic_acid_transport


id: CL:1878
description: Mixed, incl. Pilus organization, and Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1878_Mixed,_incl._Pilus_organization,_and_Phosphorelay_signal_transduction_system


id: CL:1879
description: Mixed, incl. Pilus organization, and Pilus
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1879_Mixed,_incl._Pilus_organization,_and_Pilus


id: CL:1881
description: Mixed, incl. Pilus organization, and Pilus
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1881_Mixed,_incl._Pilus_organization,_and_Pilus


id: CL:1902
description: Pilus assembly, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1902_Pilus_assembly,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:1925
description: Type II/IV secretion system protein, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1925_Type_II/IV_secretion_system_protein,_and_Aspartic-type_peptidase_activity


id: CL:1950
description: Mixed, incl. Phosphorelay signal transduction system, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1950_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_PAS_fold-3


id: CL:1951
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1951_Phosphorelay_signal_transduction_system


id: CL:1952
description: Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1952_Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:196
description: Mixed, incl. Zinc-binding ribosomal protein, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:196_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_L28p-like


id: CL:1963
description: Mixed, incl. Phosphate transport, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1963_Mixed,_incl._Phosphate_transport,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:1973
description: Regulation of protein localization, and Roadblock/LC7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1973_Regulation_of_protein_localization,_and_Roadblock/LC7_domain


id: CL:1997
description: Mixed, incl. Histone-like DNA-binding protein, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1997_Mixed,_incl._Histone-like_DNA-binding_protein,_and_Potassium_ion_transport


id: CL:1999
description: Mixed, incl. Potassium ion transport, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:1999_Mixed,_incl._Potassium_ion_transport,_and_Histone-like_DNA-binding_protein


id: CL:2001
description: Histone-like DNA-binding protein, and TrkA-N domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2001_Histone-like_DNA-binding_protein,_and_TrkA-N_domain


id: CL:2038
description: Carbohydrate biosynthetic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2038_Carbohydrate_biosynthetic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:2039
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2039_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2040
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2040_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2041
description: Mixed, incl. Polysaccharide biosynthetic process, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2041_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Blockage_of_phagosome_acidification


id: CL:2043
description: Mixed, incl. Sialylation, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2043_Mixed,_incl._Sialylation,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2055
description: Glycosyltransferase 2-like, and Sialylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2055_Glycosyltransferase_2-like,_and_Sialylation


id: CL:2066
description: Tyrosine kinase, G-rich domain, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2066_Tyrosine_kinase,_G-rich_domain,_and_Blockage_of_phagosome_acidification


id: CL:2083
description: Polyketide sugar unit biosynthesis, and Alpha/beta hydrolase fold-1
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2083_Polyketide_sugar_unit_biosynthesis,_and_Alpha/beta_hydrolase_fold-1


id: CL:2105
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2105_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_ATPase-coupled_lipid_transmembrane_transporter_activity

description:
  Mixed, incl. glycyl-tRNA aminoacylation, and ATPase-coupled lipid transmembrane transporter activity


id: CL:2124
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2124_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:2126
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2126_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:2163
description: Mixed, incl. Glycerophospholipid metabolism, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2163_Mixed,_incl._Glycerophospholipid_metabolism,_and_Glycerolipid_metabolism


id: CL:2164
description: Glycerophospholipid metabolism, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2164_Glycerophospholipid_metabolism,_and_Glycerolipid_metabolism


id: CL:2165
description: Glycerophospholipid metabolism, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2165_Glycerophospholipid_metabolism,_and_Serine_aminopeptidase,_S33


id: CL:2167
description: Cytidylyltransferase family, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2167_Cytidylyltransferase_family,_and_CDP-alcohol_phosphatidyltransferase


id: CL:2187
description: Mixed, incl. UbiA prenyltransferase family, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2187_Mixed,_incl._UbiA_prenyltransferase_family,_and_Aminoacyltransferase_activity


id: CL:2216
description: Mixed, incl. Phosphatidylserine decarboxylase, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2216_Mixed,_incl._Phosphatidylserine_decarboxylase,_and_Calcium


id: CL:2237
description: Mostly uncharacterized, incl. Protein-containing complex binding, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2237_Mostly_uncharacterized,_incl._Protein-containing_complex_binding,_and_BON_domain


id: CL:2238
description: Mostly uncharacterized, incl. BON domain, and Phosphate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2238_Mostly_uncharacterized,_incl._BON_domain,_and_Phosphate_transport


id: CL:2239
description: Mixed, incl. BON domain, and Phosphate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2239_Mixed,_incl._BON_domain,_and_Phosphate_transport


id: CL:2250
description: Mixed, incl. SbmA/BacA-like family, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2250_Mixed,_incl._SbmA/BacA-like_family,_and_FAD_dependent_oxidoreductase


id: CL:2262
description: Mixed, incl. Cell aggregation, and Di-haem cytochrome, transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2262_Mixed,_incl._Cell_aggregation,_and_Di-haem_cytochrome,_transmembrane


id: CL:2277
description: Mixed, incl. Queuosine biosynthesis, and Heme catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2277_Mixed,_incl._Queuosine_biosynthesis,_and_Heme_catabolic_process


id: CL:2297
description: Mixed, incl. RNA-DNA hybrid ribonuclease activity, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2297_Mixed,_incl._RNA-DNA_hybrid_ribonuclease_activity,_and_Queuosine_biosynthesis


id: CL:2311
description: Mixed, incl. RutC-like superfamily, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2311_Mixed,_incl._RutC-like_superfamily,_and_NUDIX_domain


id: CL:2313
description: Mixed, incl. NUDIX domain, and rRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2313_Mixed,_incl._NUDIX_domain,_and_rRNA_catabolic_process


id: CL:233
description: K homology RNA-binding domain, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:233_K_homology_RNA-binding_domain,_and_Ribosome_biogenesis


id: CL:2333
description: Mixed, incl. ER-Phagosome pathway, and Methyltransferase HemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2333_Mixed,_incl._ER-Phagosome_pathway,_and_Methyltransferase_HemK-like


id: CL:2353
description: Mixed, incl. Heme biosynthetic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2353_Mixed,_incl._Heme_biosynthetic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2355
description: Heme biosynthetic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2355_Heme_biosynthetic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2357
description: Heme biosynthetic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2357_Heme_biosynthetic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2374
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2374_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2395
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Organic cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2395_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Organic_cation_transport


id: CL:2397
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Organic cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2397_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Organic_cation_transport


id: CL:2420
description: Mixed, incl. Nitrogen metabolism, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2420_Mixed,_incl._Nitrogen_metabolism,_and_Sulfur_relay_system


id: CL:2421
description: Mixed, incl. Nitrogen metabolism, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2421_Mixed,_incl._Nitrogen_metabolism,_and_Prosthetic_group_metabolic_process


id: CL:2422
description: Mixed, incl. Heme binding, and Positive regulation of cellular process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2422_Mixed,_incl._Heme_binding,_and_Positive_regulation_of_cellular_process


id: CL:2424
description: Mixed, incl. Cytochrome c, and Active ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2424_Mixed,_incl._Cytochrome_c,_and_Active_ion_transmembrane_transporter_activity


id: CL:2425
description: Mixed, incl. Cytochrome c, and E1-E2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2425_Mixed,_incl._Cytochrome_c,_and_E1-E2_ATPase


id: CL:2429
description: Cytochrome c, and Respiratory chain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2429_Cytochrome_c,_and_Respiratory_chain


id: CL:2446
description: Cytochrome C oxidase, cbb3-type, subunit III , and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2446_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_,_and_KR_domain


id: CL:2461
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2461_Mixed,_incl._Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor,_and_Pectin_lyase_fold

description:
  Mixed, incl. Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor, and Pectin lyase fold


id: CL:2463
description: Mixed, incl. Pectin lyase fold, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2463_Mixed,_incl._Pectin_lyase_fold,_and_4Fe-4S_binding_domain


id: CL:2475
description: Mixed, incl. Transcription regulator Rrf2, and Siderophore metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2475_Mixed,_incl._Transcription_regulator_Rrf2,_and_Siderophore_metabolic_process


id: CL:2492
description: Mixed, incl. Prosthetic group metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2492_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Nitrogen_metabolism


id: CL:2493
description: Nitrogen metabolism, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2493_Nitrogen_metabolism,_and_Nitrate_assimilation


id: CL:2495
description: Nitrate metabolic process, and Nitrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2495_Nitrate_metabolic_process,_and_Nitrate_transporter


id: CL:250
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:250_RNA_polymerase,_and_Transcription_termination


id: CL:2516
description: Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2516_Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:2517
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2517_Prosthetic_group_metabolic_process


id: CL:2530
description: Molybdate ion transport, and Serine/threonine-protein kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2530_Molybdate_ion_transport,_and_Serine/threonine-protein_kinase


id: CL:2546
description: Mixed, incl. Iron-sulfur cluster assembly, and 2 iron, 2 sulfur cluster binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2546_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_2_iron,_2_sulfur_cluster_binding


id: CL:2547
description: Mixed, incl. Iron-sulfur cluster assembly, and 2 iron, 2 sulfur cluster binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2547_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_2_iron,_2_sulfur_cluster_binding


id: CL:2548
description: Iron-sulfur cluster assembly, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2548_Iron-sulfur_cluster_assembly,_and_Fido_domain


id: CL:2574
description: Mixed, incl. Glutaredoxin, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2574_Mixed,_incl._Glutaredoxin,_and_BolA_protein


id: CL:2588
description: Mixed, incl. Peptidase complex, and tRNA thio-modification
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2588_Mixed,_incl._Peptidase_complex,_and_tRNA_thio-modification


id: CL:2597
description: Mixed, incl. Base excision repair, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2597_Mixed,_incl._Base_excision_repair,_and_Iron_ion_transport


id: CL:2598
description: Mixed, incl. Base excision repair, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2598_Mixed,_incl._Base_excision_repair,_and_FecCD_transport_family


id: CL:2599
description: Mixed, incl. FecCD transport family, and Base excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2599_Mixed,_incl._FecCD_transport_family,_and_Base_excision_repair


id: CL:2601
description: Base excision repair, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2601_Base_excision_repair,_and_Transglycosylase_SLT_domain


id: CL:2623
description: FecCD transport family, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2623_FecCD_transport_family,_and_Iron_ion_transport


id: CL:2632
description: Mixed, incl. Nitrogen utilization, and MafB19-like deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2632_Mixed,_incl._Nitrogen_utilization,_and_MafB19-like_deaminase


id: CL:2641
description: Mixed, incl. Iron ion transport, and Ribonuclease E/G
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2641_Mixed,_incl._Iron_ion_transport,_and_Ribonuclease_E/G


id: CL:2642
description: Mixed, incl. Ribonuclease E/G, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2642_Mixed,_incl._Ribonuclease_E/G,_and_Methyltransferase_complex


id: CL:2643
description: Mixed, incl. Innate Immune System, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2643_Mixed,_incl._Innate_Immune_System,_and_Coiled_coil


id: CL:2652
description: Mixed, incl. Ribonuclease E/G, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2652_Mixed,_incl._Ribonuclease_E/G,_and_Methyltransferase_complex


id: CL:2662
description: Mixed, incl. Ferrous iron transmembrane transporter activity, and SNase-like, OB-fold superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2662_Mixed,_incl._Ferrous_iron_transmembrane_transporter_activity,_and_SNase-like,_OB-fold_superfamily


id: CL:2676
description: Mixed, incl. ABC transporters, and Negative regulation of cellular biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2676_Mixed,_incl._ABC_transporters,_and_Negative_regulation_of_cellular_biosynthetic_process


id: CL:2678
description: Mixed, incl. Polyamine transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2678_Mixed,_incl._Polyamine_transport,_and_MetI-like_superfamily


id: CL:2681
description: Mixed, incl. Ferric-uptake regulator, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2681_Mixed,_incl._Ferric-uptake_regulator,_and_ABC_transporter,_BtuC-like


id: CL:2699
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2699_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:2723
description: Oligopeptide/dipeptide ABC transporter, C-terminal, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2723_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_MetI-like_superfamily


id: CL:2737
description: Mixed, incl. Sel1-like repeat, and rRNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2737_Mixed,_incl._Sel1-like_repeat,_and_rRNA_modification


id: CL:2738
description: Mixed, incl. Sel1-like repeat, and Transcriptional regulator MarR-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2738_Mixed,_incl._Sel1-like_repeat,_and_Transcriptional_regulator_MarR-type,_conserved_site


id: CL:2739
description: Sel1-like repeat, and Translation release factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2739_Sel1-like_repeat,_and_Translation_release_factor_activity


id: CL:2765
description: Mixed, incl. Sel1 repeat, and Regulatory factor, effector binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2765_Mixed,_incl._Sel1_repeat,_and_Regulatory_factor,_effector_binding_domain_superfamily


id: CL:2775
description: Mixed, incl. BRO N-terminal domain, and Domain of unknown function DUF4224
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2775_Mixed,_incl._BRO_N-terminal_domain,_and_Domain_of_unknown_function_DUF4224


id: CL:2789
description: Mixed, incl. Intrinsic component of membrane, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2789_Mixed,_incl._Intrinsic_component_of_membrane,_and_DNA_binding


id: CL:2790
description: Mixed, incl. Intrinsic component of membrane, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2790_Mixed,_incl._Intrinsic_component_of_membrane,_and_DNA_binding


id: CL:2791
description: Mixed, incl. Intrinsic component of membrane, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2791_Mixed,_incl._Intrinsic_component_of_membrane,_and_DNA_binding


id: CL:2792
description: Mixed, incl. Intrinsic component of membrane, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2792_Mixed,_incl._Intrinsic_component_of_membrane,_and_DDE_transposase_sub-family


id: CL:2793
description: Mixed, incl. Transition metal ion transport, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2793_Mixed,_incl._Transition_metal_ion_transport,_and_Intrinsic_component_of_membrane


id: CL:2794
description: Mixed, incl. Transition metal ion transport, and Intrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2794_Mixed,_incl._Transition_metal_ion_transport,_and_Intrinsic_component_of_membrane


id: CL:2795
description: Mixed, incl. Transition metal ion transport, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2795_Mixed,_incl._Transition_metal_ion_transport,_and_Outer_membrane


id: CL:2797
description: Mixed, incl. Transition metal ion transport, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2797_Mixed,_incl._Transition_metal_ion_transport,_and_SGNH_hydrolase_superfamily


id: CL:2799
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2799_Mostly_uncharacterized,_incl._Surface_lipoprotein_assembly_modifier,_and_Porphyrin_and_chlorophyll_metabolism

description:
  Mostly uncharacterized, incl. Surface lipoprotein assembly modifier, and Porphyrin and chlorophyll metabolism


id: CL:2801
description: Mostly uncharacterized, incl. Surface lipoprotein assembly modifier, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2801_Mostly_uncharacterized,_incl._Surface_lipoprotein_assembly_modifier,_and_SGNH_hydrolase_superfamily


id: CL:2802
description: Mixed, incl. Surface lipoprotein assembly modifier, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2802_Mixed,_incl._Surface_lipoprotein_assembly_modifier,_and_SGNH_hydrolase_superfamily


id: CL:2804
description: Mixed, incl. Surface lipoprotein assembly modifier, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2804_Mixed,_incl._Surface_lipoprotein_assembly_modifier,_and_BamE-like


id: CL:2806
description: Mixed, incl. Surface lipoprotein assembly modifier, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2806_Mixed,_incl._Surface_lipoprotein_assembly_modifier,_and_BamE-like


id: CL:2836
description: SGNH hydrolase superfamily, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2836_SGNH_hydrolase_superfamily,_and_Aquaporin-like


id: CL:2845
description: Mixed, incl. SbmA/BacA-like family, and Zonular occludens toxin (Zot)
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2845_Mixed,_incl._SbmA/BacA-like_family,_and_Zonular_occludens_toxin_(Zot)


id: CL:2874
description: Mixed, incl. Siderophore transport, and TonB-dependent receptor, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2874_Mixed,_incl._Siderophore_transport,_and_TonB-dependent_receptor,_conserved_site


id: CL:2876
description: Siderophore transport, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2876_Siderophore_transport,_and_Protein_transport


id: CL:2886
description: TonB box, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2886_TonB_box,_and_Copper_ion_binding


id: CL:2905
description: Mixed, incl. Capsid protein G8P, and Replication initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2905_Mixed,_incl._Capsid_protein_G8P,_and_Replication_initiation_factor


id: CL:2906
description: Mixed, incl. Molecular transducer activity, and Capsid protein G8P
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2906_Mixed,_incl._Molecular_transducer_activity,_and_Capsid_protein_G8P


id: CL:2907
description: Mixed, incl. Transposase domain (DUF772), and Replication initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2907_Mixed,_incl._Transposase_domain_(DUF772),_and_Replication_initiation_factor


id: CL:2919
description: Molecular transducer activity, and Protein of unkown function DUF2523
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2919_Molecular_transducer_activity,_and_Protein_of_unkown_function_DUF2523


id: CL:2929
description: Mixed, incl. Capsid protein G8P, and Zonular occludens toxin (Zot)
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2929_Mixed,_incl._Capsid_protein_G8P,_and_Zonular_occludens_toxin_(Zot)


id: CL:2938
description: Mixed, incl. Capsid protein G8P, and TspB virulence factor
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2938_Mixed,_incl._Capsid_protein_G8P,_and_TspB_virulence_factor


id: CL:2949
description: Mixed, incl. MORN repeat, and PPM-type phosphatase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2949_Mixed,_incl._MORN_repeat,_and_PPM-type_phosphatase-like_domain_superfamily


id: CL:2951
description: Mixed, incl. Replication initiation factor, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2951_Mixed,_incl._Replication_initiation_factor,_and_Signal


id: CL:2969
description: Mixed, incl. DEDD transposase family, and Transposase DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2969_Mixed,_incl._DEDD_transposase_family,_and_Transposase_DDE_domain


id: CL:2970
description: Mixed, incl. Transposase sub-family, and Zonular occludens toxin (Zot)
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2970_Mixed,_incl._Transposase_sub-family,_and_Zonular_occludens_toxin_(Zot)


id: CL:2983
description: Transposase DDE domain, and DEDD transposase family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2983_Transposase_DDE_domain,_and_DEDD_transposase_family


id: CL:2998
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:2998_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_Mu-type_HTH_domain

description:
  Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and Mu-type HTH domain


id: CL:3000
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3000_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_DNA_integration

description:
  Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and DNA integration


id: CL:3001
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3001_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_DNA_integration

description:
  Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and DNA integration


id: CL:3002
description: Mostly uncharacterized, incl. Peptidase S24-like, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3002_Mostly_uncharacterized,_incl._Peptidase_S24-like,_and_DNA_integration


id: CL:3003
description: Mostly uncharacterized, incl. Peptidase S24-like, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3003_Mostly_uncharacterized,_incl._Peptidase_S24-like,_and_DNA_integration


id: CL:3005
description: Mixed, incl. DNA integration, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3005_Mixed,_incl._DNA_integration,_and_AAA_domain


id: CL:3006
description: Mixed, incl. DNA integration, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3006_Mixed,_incl._DNA_integration,_and_AAA_domain


id: CL:3008
description: Mixed, incl. AAA domain, and Bacteriophage Mu, Gp16
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3008_Mixed,_incl._AAA_domain,_and_Bacteriophage_Mu,_Gp16


id: CL:3010
description: Mixed, incl. Integrase, catalytic core, and Winged helix-turn-helix DNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3010_Mixed,_incl._Integrase,_catalytic_core,_and_Winged_helix-turn-helix_DNA-binding


id: CL:302
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:302_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3042
description: Mixed, incl. Phage-related minor tail protein, and Phage virion morphogensis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3042_Mixed,_incl._Phage-related_minor_tail_protein,_and_Phage_virion_morphogensis_protein


id: CL:3067
description: Mixed, incl. Phage-related minor tail protein, and Phage virion morphogensis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3067_Mixed,_incl._Phage-related_minor_tail_protein,_and_Phage_virion_morphogensis_protein


id: CL:3081
description: Mostly uncharacterized, incl. Lysozyme activity, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3081_Mostly_uncharacterized,_incl._Lysozyme_activity,_and_NAD-dependent_epimerase/dehydratase


id: CL:3083
description: Mostly uncharacterized, incl. Peptidase M15
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3083_Mostly_uncharacterized,_incl._Peptidase_M15


id: CL:3101
description: Mixed, incl. NAD-dependent epimerase/dehydratase, and ArsR-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3101_Mixed,_incl._NAD-dependent_epimerase/dehydratase,_and_ArsR-like_helix-turn-helix_domain


id: CL:3148
description: Mixed, incl. Band 7 domain, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3148_Mixed,_incl._Band_7_domain,_and_DDE_transposase_sub-family


id: CL:3163
description: Mostly uncharacterized, incl. Peptidase M15
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3163_Mostly_uncharacterized,_incl._Peptidase_M15


id: CL:3174
description: Mixed, incl. Regulation of cell cycle, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3174_Mixed,_incl._Regulation_of_cell_cycle,_and_Elongation_factor_G_C-terminus


id: CL:3175
description: Regulation of cell cycle, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3175_Regulation_of_cell_cycle,_and_Elongation_factor_G_C-terminus


id: CL:3184
description: Mixed, incl. Replication initiation factor, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3184_Mixed,_incl._Replication_initiation_factor,_and_Signal


id: CL:3193
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3193_Mixed,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Transmembrane_transporter_activity

description:
  Mixed, incl. Biological process involved in interspecies interaction between organisms, and Transmembrane transporter activity


id: CL:3194
description: Mixed, incl. Serralysin-like metalloprotease, C-terminal, and Transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3194_Mixed,_incl._Serralysin-like_metalloprotease,_C-terminal,_and_Transmembrane_transporter_activity


id: CL:3196
description: Mixed, incl. Serralysin-like metalloprotease, C-terminal, and CshA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3196_Mixed,_incl._Serralysin-like_metalloprotease,_C-terminal,_and_CshA_domain


id: CL:3198
description: Mixed, incl. Serralysin-like metalloprotease, C-terminal, and Haemolysin activator HlyB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3198_Mixed,_incl._Serralysin-like_metalloprotease,_C-terminal,_and_Haemolysin_activator_HlyB,_C-terminal


id: CL:3201
description: RTX calcium-binding nonapeptide repeat, and VCBS repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3201_RTX_calcium-binding_nonapeptide_repeat,_and_VCBS_repeat


id: CL:3203
description: Mixed, incl. CshA domain, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3203_Mixed,_incl._CshA_domain,_and_Biotin-lipoyl_like


id: CL:3224
description: Haemolysin activator HlyB, C-terminal, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3224_Haemolysin_activator_HlyB,_C-terminal,_and_Pectin_lyase_fold


id: CL:3248
description: Mixed, incl. Nitroreductase, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3248_Mixed,_incl._Nitroreductase,_and_Efflux_transmembrane_transporter_activity


id: CL:3250
description: Mixed, incl. Nitroreductase, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3250_Mixed,_incl._Nitroreductase,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3252
description: RND efflux pump, membrane fusion protein, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3252_RND_efflux_pump,_membrane_fusion_protein,_and_Efflux_transmembrane_transporter_activity


id: CL:3262
description: Nitroreductase, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3262_Nitroreductase,_and_ABC-2_family_transporter_protein


id: CL:3277
description: Mixed, incl. Integral membrane protein, YccS, and Mce/MlaD
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3277_Mixed,_incl._Integral_membrane_protein,_YccS,_and_Mce/MlaD


id: CL:3298
description: Mixed, incl. Biological process involved in symbiotic interaction, and Peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3298_Mixed,_incl._Biological_process_involved_in_symbiotic_interaction,_and_Peptidase_activity


id: CL:3299
description: Mixed, incl. Viral process, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3299_Mixed,_incl._Viral_process,_and_NlpC/P60_family


id: CL:3302
description: Mixed, incl. Viral process, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3302_Mixed,_incl._Viral_process,_and_NlpC/P60_family


id: CL:3318
description: Mixed, incl. Peptidase M15 , and Adhesion of symbiont to host
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3318_Mixed,_incl._Peptidase_M15_,_and_Adhesion_of_symbiont_to_host


id: CL:3335
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3335_Mixed,_incl._Modulation_of_process_of_another_organism,_and_ATP-dependent_Clp_protease_proteolytic_subunit

description:
  Mixed, incl. Modulation of process of another organism, and ATP-dependent Clp protease proteolytic subunit


id: CL:3337
description: Mixed, incl. ATP-dependent Clp protease proteolytic subunit, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3337_Mixed,_incl._ATP-dependent_Clp_protease_proteolytic_subunit,_and_Host_cell


id: CL:3349
description: Mixed, incl. Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3349_Mixed,_incl._Regulation_of_cell_killing


id: CL:3369
description: Mixed, incl. Response to pH, and SNase-like, OB-fold superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3369_Mixed,_incl._Response_to_pH,_and_SNase-like,_OB-fold_superfamily


id: CL:3385
description: Mixed, incl. DNA recombination, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3385_Mixed,_incl._DNA_recombination,_and_Protein_transmembrane_transport


id: CL:3386
description: Mixed, incl. Protein transmembrane transport, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3386_Mixed,_incl._Protein_transmembrane_transport,_and_DNA_recombination


id: CL:3387
description: Mixed, incl. Protein transmembrane transport, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3387_Mixed,_incl._Protein_transmembrane_transport,_and_DNA_recombination


id: CL:3389
description: Mixed, incl. Protein transmembrane transport, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3389_Mixed,_incl._Protein_transmembrane_transport,_and_Bacterial_chemotaxis


id: CL:339
description: Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:339_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_RNA_helicase_activity


id: CL:3390
description: Mixed, incl. Protein transmembrane transport, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3390_Mixed,_incl._Protein_transmembrane_transport,_and_Bacterial_chemotaxis


id: CL:3392
description: Mixed, incl. Protein transmembrane transport, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3392_Mixed,_incl._Protein_transmembrane_transport,_and_Bacterial_chemotaxis


id: CL:3395
description: Mixed, incl. Bacterial chemotaxis, and Secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3395_Mixed,_incl._Bacterial_chemotaxis,_and_Secretion_by_the_type_IV_secretion_system


id: CL:3397
description: Mixed, incl. Bacterial chemotaxis, and Secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3397_Mixed,_incl._Bacterial_chemotaxis,_and_Secretion_by_the_type_IV_secretion_system


id: CL:3400
description: Mixed, incl. Bacterial chemotaxis, and Secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3400_Mixed,_incl._Bacterial_chemotaxis,_and_Secretion_by_the_type_IV_secretion_system


id: CL:3402
description: Mixed, incl. Secretion by the type IV secretion system, and Lytic transglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3402_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Lytic_transglycosylase_activity


id: CL:3404
description: Mixed, incl. Secretion by the type IV secretion system, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3404_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Transglycosylase_SLT_domain


id: CL:3406
description: Secretion by the type IV secretion system, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3406_Secretion_by_the_type_IV_secretion_system,_and_Bacterial_secretion_system


id: CL:3416
description: Mixed, incl. TraG, P-loop domain, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3416_Mixed,_incl._TraG,_P-loop_domain,_and_DNA_primase_activity


id: CL:342
description: Mixed, incl. 50S ribosomal protein L30e-like, and Chromosome separation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:342_Mixed,_incl._50S_ribosomal_protein_L30e-like,_and_Chromosome_separation


id: CL:3471
description: Mixed, incl. Protein secretion by the type IV secretion system, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3471_Mixed,_incl._Protein_secretion_by_the_type_IV_secretion_system,_and_Toxin-antitoxin_complex


id: CL:3497
description: Mixed, incl. DDE transposase sub-family, and Protein of unknown function DUF6585
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3497_Mixed,_incl._DDE_transposase_sub-family,_and_Protein_of_unknown_function_DUF6585


id: CL:3518
description: Mixed, incl. Integrase, catalytic domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3518_Mixed,_incl._Integrase,_catalytic_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:3537
description: Mixed, incl. CAP domain, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3537_Mixed,_incl._CAP_domain,_and_DHHA1_domain


id: CL:3538
description: Mixed, incl. CAP domain, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3538_Mixed,_incl._CAP_domain,_and_DHHA1_domain


id: CL:3547
description: Mixed, incl. DDE transposase sub-family, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3547_Mixed,_incl._DDE_transposase_sub-family,_and_DDE_transposase_sub-family


id: CL:356
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:356_RNA_helicase_activity,_and_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)

description:
  RNA helicase activity, and Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)


id: CL:3561
description: Mixed, incl. PIN-like domain superfamily, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3561_Mixed,_incl._PIN-like_domain_superfamily,_and_Iron_ion_homeostasis


id: CL:3563
description: Iron ion homeostasis, and PIN-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3563_Iron_ion_homeostasis,_and_PIN-like_domain_superfamily


id: CL:3580
description: Mixed, incl. Transcription regulator PrtN, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3580_Mixed,_incl._Transcription_regulator_PrtN,_and_PIN_domain


id: CL:3581
description: Mixed, incl. PIN domain, and KilA, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3581_Mixed,_incl._PIN_domain,_and_KilA,_N-terminal


id: CL:3590
description: Mixed, incl. Transcription regulator PrtN
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3590_Mixed,_incl._Transcription_regulator_PrtN


id: CL:3599
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3599_Mostly_uncharacterized,_incl._Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mostly uncharacterized, incl. Acyltransferase activity, transferring groups other than amino-acyl groups, and Helix-turn-helix XRE-family like proteins


id: CL:3600
description: Mixed, incl. Lipopolysaccharide biosynthetic process, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3600_Mixed,_incl._Lipopolysaccharide_biosynthetic_process,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3601
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and TPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3601_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_TPM_domain


id: CL:3603
description: Mixed, incl. DNA synthesis involved in DNA repair, and Positive regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3603_Mixed,_incl._DNA_synthesis_involved_in_DNA_repair,_and_Positive_regulation_of_RNA_metabolic_process


id: CL:3606
description: Mixed, incl. DNA synthesis involved in DNA repair, and Phosphoethanolamine transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3606_Mixed,_incl._DNA_synthesis_involved_in_DNA_repair,_and_Phosphoethanolamine_transferase


id: CL:3630
description: TPM domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3630_TPM_domain,_and_Glycosyl_transferase_family_2


id: CL:3642
description: Mixed, incl. Acyltransferase family, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3642_Mixed,_incl._Acyltransferase_family,_and_Peptidase_M48


id: CL:3644
description: Mixed, incl. Peptidase M48, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3644_Mixed,_incl._Peptidase_M48,_and_Dioxygenase_activity


id: CL:3665
description: Mixed, incl. Protein lipoylation, and Response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3665_Mixed,_incl._Protein_lipoylation,_and_Response_to_heat


id: CL:3666
description: Mixed, incl. HIT domain, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3666_Mixed,_incl._HIT_domain,_and_Class_I_glutamine_amidotransferase-like


id: CL:3675
description: Protein lipoylation, and Cellular response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3675_Protein_lipoylation,_and_Cellular_response_to_heat


id: CL:3684
description: Mixed, incl. DNA modification, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3684_Mixed,_incl._DNA_modification,_and_LysR,_substrate-binding


id: CL:3685
description: Mixed, incl. DNA modification, and Heavy-metal-associated, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3685_Mixed,_incl._DNA_modification,_and_Heavy-metal-associated,_conserved_site


id: CL:3686
description: DNA modification, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3686_DNA_modification,_and_Porin_activity


id: CL:3688
description: Mixed, incl. Type I restriction modification DNA specificity domain, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3688_Mixed,_incl._Type_I_restriction_modification_DNA_specificity_domain,_and_N-6_DNA_Methylase


id: CL:3690
description: Type I restriction modification DNA specificity domain, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3690_Type_I_restriction_modification_DNA_specificity_domain,_and_N-6_DNA_Methylase


id: CL:372
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:372_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:3722
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3722_Mixed,_incl._AhpD-like,_and_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor

description:
  Mixed, incl. AhpD-like, and Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor


id: CL:3740
description: Mixed, incl. LysR, substrate-binding, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3740_Mixed,_incl._LysR,_substrate-binding,_and_Polyamine_metabolic_process


id: CL:3742
description: Transcription regulator HTH, LysR, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3742_Transcription_regulator_HTH,_LysR,_and_Lipopolysaccharide_transport


id: CL:375
description: Protein folding chaperone, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:375_Protein_folding_chaperone,_and_Stress_response


id: CL:3760
description: Mixed, incl. Polyamine metabolic process, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3760_Mixed,_incl._Polyamine_metabolic_process,_and_Mannosylation


id: CL:3761
description: Mixed, incl. SIR2-like domain, and Protein of unknown function DUF937
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3761_Mixed,_incl._SIR2-like_domain,_and_Protein_of_unknown_function_DUF937


id: CL:3770
description: Polyamine metabolic process, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3770_Polyamine_metabolic_process,_and_Mannosylation


id: CL:3779
description: Mixed, incl. Hydrolase activity, acting on ester bonds, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3779_Mixed,_incl._Hydrolase_activity,_acting_on_ester_bonds,_and_Von_Willebrand_factor,_type_A


id: CL:3780
description: Mixed, incl. TerD domain, and Phosphoric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3780_Mixed,_incl._TerD_domain,_and_Phosphoric_ester_hydrolase_activity


id: CL:3781
description: Mixed, incl. TerD domain, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3781_Mixed,_incl._TerD_domain,_and_Von_Willebrand_factor,_type_A


id: CL:3783
description: Mixed, incl. TerD domain, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3783_Mixed,_incl._TerD_domain,_and_Von_Willebrand_factor,_type_A


id: CL:3784
description: TerD domain, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3784_TerD_domain,_and_Von_Willebrand_factor,_type_A


id: CL:3786
description: TerD domain, and Tellurite resistance, TerY
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3786_TerD_domain,_and_Tellurite_resistance,_TerY


id: CL:379
description: Protein folding chaperone, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:379_Protein_folding_chaperone,_and_DnaJ_domain


id: CL:3805
description: Mixed, incl. GlnD PII-uridylyltransferase, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3805_Mixed,_incl._GlnD_PII-uridylyltransferase,_and_Vitamin_catabolic_process


id: CL:3823
description: Mixed, incl. Primary alcohol biosynthetic process, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3823_Mixed,_incl._Primary_alcohol_biosynthetic_process,_and_Transmembrane_helix


id: CL:3851
description: Mostly uncharacterized, incl. 5-3 exodeoxyribonuclease activity, and RecT family
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3851_Mostly_uncharacterized,_incl._5-3_exodeoxyribonuclease_activity,_and_RecT_family


id: CL:3853
description: Mixed, incl. RecT family, and 5-3 exodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3853_Mixed,_incl._RecT_family,_and_5-3_exodeoxyribonuclease_activity


id: CL:3876
description: Mixed, incl. RecT family, and 5-3 exodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3876_Mixed,_incl._RecT_family,_and_5-3_exodeoxyribonuclease_activity


id: CL:3892
description: Mixed, incl. Symport, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3892_Mixed,_incl._Symport,_and_DNA_dealkylation


id: CL:3894
description: Mixed, incl. Symport, and PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3894_Mixed,_incl._Symport,_and_PmbA/TldA_metallopeptidase_domain_1


id: CL:3912
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3912_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Regulation_of_cell_killing


id: CL:3928
description: Mixed, incl. ThiF family, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3928_Mixed,_incl._ThiF_family,_and_DNA_dealkylation


id: CL:3941
description: Mixed, incl. Bacterial periplasmic substrate-binding proteins, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3941_Mixed,_incl._Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_transport


id: CL:3942
description: Mixed, incl. Bacterial periplasmic substrate-binding proteins, and Pyridoxine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3942_Mixed,_incl._Bacterial_periplasmic_substrate-binding_proteins,_and_Pyridoxine_biosynthesis


id: CL:3943
description: Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3943_Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transporter_activity


id: CL:3948
description: Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3948_Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transporter_activity


id: CL:3950
description: Solute-binding protein family 3, conserved site, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3950_Solute-binding_protein_family_3,_conserved_site,_and_ABC-type_amino_acid_transporter_activity


id: CL:3974
description: Pyridoxine biosynthesis, and Aminopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3974_Pyridoxine_biosynthesis,_and_Aminopeptidase_activity


id: CL:3985
description: Mixed, incl. Sulfur compound transport, and Regulatory factor, effector binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3985_Mixed,_incl._Sulfur_compound_transport,_and_Regulatory_factor,_effector_binding_domain_superfamily


id: CL:3996
description: Mixed, incl. DNA-methyltransferase activity, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3996_Mixed,_incl._DNA-methyltransferase_activity,_and_Endonuclease_activity


id: CL:3997
description: Mixed, incl. DNA-methyltransferase activity, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3997_Mixed,_incl._DNA-methyltransferase_activity,_and_Endonuclease_activity


id: CL:3999
description: Mixed, incl. Adenine-specific methyltransferase, domain 2, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:3999_Mixed,_incl._Adenine-specific_methyltransferase,_domain_2,_and_PIN_domain


id: CL:4001
description: Mixed, incl. PIN domain, and AAA ATPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4001_Mixed,_incl._PIN_domain,_and_AAA_ATPase_domain


id: CL:4027
description: Mixed, incl. DNA methylation on cytosine, and D12 class N6 adenine-specific DNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4027_Mixed,_incl._DNA_methylation_on_cytosine,_and_D12_class_N6_adenine-specific_DNA_methyltransferase


id: CL:4053
description: Mixed, incl. DNA methylase, and Peptidase S1, PA clan
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4053_Mixed,_incl._DNA_methylase,_and_Peptidase_S1,_PA_clan


id: CL:4054
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4054_Mixed,_incl._N4/N6-methyltransferase,_Type_III_restriction-modification_enzyme_EcoPI_Mod_subunit-like,_and_Peptidase_S1,_PA_clan

description:
  Mixed, incl. N4/N6-methyltransferase, Type III restriction-modification enzyme EcoPI Mod subunit-like, and Peptidase S1, PA clan


id: CL:4055
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4055_Mixed,_incl._N4/N6-methyltransferase,_Type_III_restriction-modification_enzyme_EcoPI_Mod_subunit-like,_and_Conserved_hypothetical_protein_95

description:
  Mixed, incl. N4/N6-methyltransferase, Type III restriction-modification enzyme EcoPI Mod subunit-like, and Conserved hypothetical protein 95


id: CL:4069
description: Mixed, incl. Peptidase S1, PA clan, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4069_Mixed,_incl._Peptidase_S1,_PA_clan,_and_Regulation_of_DNA_replication


id: CL:4080
description: Mixed, incl. DNA methylase, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4080_Mixed,_incl._DNA_methylase,_and_Endonuclease_activity


id: CL:4093
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4093_Mostly_uncharacterized,_incl._Phosphotransferase_activity,_paired_acceptors,_and_Sequence-specific_DNA_binding

description:
  Mostly uncharacterized, incl. Phosphotransferase activity, paired acceptors, and Sequence-specific DNA binding


id: CL:4094
description: Mixed, incl. Sequence-specific DNA binding, and Beta-lactamase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4094_Mixed,_incl._Sequence-specific_DNA_binding,_and_Beta-lactamase_activity


id: CL:4097
description: Mixed, incl. Sequence-specific DNA binding, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4097_Mixed,_incl._Sequence-specific_DNA_binding,_and_Protein_alkylation


id: CL:4116
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4116_Mostly_uncharacterized,_incl._Large_polyvalent_protein-associated_domain_3,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. Large polyvalent protein-associated domain 3, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:4117
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4117_Mixed,_incl._Large_polyvalent_protein-associated_domain_3,_and_P-loop_containing_nucleoside_triphosphate_hydrolase

description:
  Mixed, incl. Large polyvalent protein-associated domain 3, and P-loop containing nucleoside triphosphate hydrolase


id: CL:412
description: tRNA processing, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:412_tRNA_processing,_and_GTP_binding_domain


id: CL:4128
description: Mixed, incl. Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4128_Mixed,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:4137
description: Mixed, incl. Phosphotransferase activity, paired acceptors, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4137_Mixed,_incl._Phosphotransferase_activity,_paired_acceptors,_and_CAP_domain


id: CL:414
description: Mixed, incl. GTP binding domain, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:414_Mixed,_incl._GTP_binding_domain,_and_RNA_(guanine-N7)-methylation


id: CL:4148
description: Mostly uncharacterized, incl. protein-DNA complex, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4148_Mostly_uncharacterized,_incl._protein-DNA_complex,_and_Coiled_coil


id: CL:4149
description: Mostly uncharacterized, incl. protein-DNA complex, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4149_Mostly_uncharacterized,_incl._protein-DNA_complex,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:4150
description: Mixed, incl. protein-DNA complex, and BRO N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4150_Mixed,_incl._protein-DNA_complex,_and_BRO_N-terminal_domain


id: CL:4151
description: Mixed, incl. Primosome complex, and Terminase small subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4151_Mixed,_incl._Primosome_complex,_and_Terminase_small_subunit


id: CL:4153
description: Mixed, incl. Terminase small subunit, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4153_Mixed,_incl._Terminase_small_subunit,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:4167
description: Primosome complex, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4167_Primosome_complex,_and_Transmembrane_helix


id: CL:4177
description: Mixed, incl. RecT family, and Domain of unknown function DUF4224
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4177_Mixed,_incl._RecT_family,_and_Domain_of_unknown_function_DUF4224


id: CL:4190
description: Mostly uncharacterized, incl. ParB/Sulfiredoxin, and Phage virion morphogensis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4190_Mostly_uncharacterized,_incl._ParB/Sulfiredoxin,_and_Phage_virion_morphogensis_protein


id: CL:4191
description: Mixed, incl. ParB/Sulfiredoxin, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4191_Mixed,_incl._ParB/Sulfiredoxin,_and_PUA-like_superfamily


id: CL:4194
description: Mixed, incl. ParB/Sulfiredoxin, and Sulfur compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4194_Mixed,_incl._ParB/Sulfiredoxin,_and_Sulfur_compound_biosynthetic_process


id: CL:4211
description: Mixed, incl. Phage virion morphogensis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4211_Mixed,_incl._Phage_virion_morphogensis_protein


id: CL:4226
description: Mostly uncharacterized, incl. Primosome complex, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4226_Mostly_uncharacterized,_incl._Primosome_complex,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4227
description: Mostly uncharacterized, incl. Entry into host, and Terminase small subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4227_Mostly_uncharacterized,_incl._Entry_into_host,_and_Terminase_small_subunit


id: CL:4228
description: Mostly uncharacterized, incl. Entry into host, and Defence against restriction A, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4228_Mostly_uncharacterized,_incl._Entry_into_host,_and_Defence_against_restriction_A,_N-terminal


id: CL:4229
description: Mixed, incl. Entry into host, and Defence against restriction A, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4229_Mixed,_incl._Entry_into_host,_and_Defence_against_restriction_A,_N-terminal


id: CL:4249
description: Mixed, incl. Terminase small subunit , and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4249_Mixed,_incl._Terminase_small_subunit_,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4258
description: Mixed, incl. Primosome complex, and Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4258_Mixed,_incl._Primosome_complex,_and_Protein_serine/threonine_kinase_activity


id: CL:4280
description: Mixed, incl. AAA domain, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4280_Mixed,_incl._AAA_domain,_and_Six-hairpin_glycosidase_superfamily


id: CL:4281
description: Six-hairpin glycosidase superfamily, and Na+/H+ antiporter, NhaC-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4281_Six-hairpin_glycosidase_superfamily,_and_Na+/H+_antiporter,_NhaC-like,_C-terminal


id: CL:4290
description: AAA domain, and OmpA-like transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4290_AAA_domain,_and_OmpA-like_transmembrane_domain


id: CL:4305
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4305_Mixed,_incl._Peptidase_C39,_bacteriocin_processing,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel

description:
  Mixed, incl. Peptidase C39, bacteriocin processing, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel


id: CL:432
description: Mixed, incl. AAA domain, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:432_Mixed,_incl._AAA_domain,_and_TRAM_domain


id: CL:4321
description: Mixed, incl. Oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4321_Mixed,_incl._Oxidoreductase_activity


id: CL:4353
description: Mostly uncharacterized, incl. Antiviral defense, and Defence against restriction A, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4353_Mostly_uncharacterized,_incl._Antiviral_defense,_and_Defence_against_restriction_A,_N-terminal


id: CL:4354
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4354_Mostly_uncharacterized,_incl._Cell_wall_macromolecule_catabolic_process,_and_Double-stranded_DNA_binding

description:
  Mostly uncharacterized, incl. Cell wall macromolecule catabolic process, and Double-stranded DNA binding


id: CL:4357
description: Mixed, incl. Cell wall macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4357_Mixed,_incl._Cell_wall_macromolecule_catabolic_process


id: CL:4368
description: Mixed, incl. Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4368_Mixed,_incl._Double-stranded_DNA_binding


id: CL:4377
description: Mostly uncharacterized, incl. Antiviral defense, and Defence against restriction A, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4377_Mostly_uncharacterized,_incl._Antiviral_defense,_and_Defence_against_restriction_A,_N-terminal


id: CL:4379
description: Mostly uncharacterized, incl. Translation initiation factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4379_Mostly_uncharacterized,_incl._Translation_initiation_factor_activity


id: CL:4413
description: Mixed, incl. Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4413_Mixed,_incl._Transmembrane_helix


id: CL:447
description: DUS-like, FMN-binding domain, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:447_DUS-like,_FMN-binding_domain,_and_Protein_carrier_chaperone


id: CL:4476
description: Mixed, incl. Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:4476_Mixed,_incl._Transmembrane_helix


id: CL:470
description: Homologous recombination, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:470_Homologous_recombination,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:471
description: Homologous recombination, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:471_Homologous_recombination,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:473
description: Homologous recombination, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:473_Homologous_recombination,_and_DNA_repair_complex


id: CL:476
description: DNA repair, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:476_DNA_repair,_and_DNA_topoisomerase,_type_IA


id: CL:478
description: Mixed, incl. DNA damage sensor activity, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:478_Mixed,_incl._DNA_damage_sensor_activity,_and_DNA_topoisomerase,_type_IA


id: CL:481
description: DNA damage sensor activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:481_DNA_damage_sensor_activity,_and_AAA_domain


id: CL:508
description: Holliday junction helicase complex, and Regulation of response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:508_Holliday_junction_helicase_complex,_and_Regulation_of_response_to_stress


id: CL:525
description: DNA-directed DNA polymerase activity, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:525_DNA-directed_DNA_polymerase_activity,_and_Primosome


id: CL:559
description: Chromosome partition, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:559_Chromosome_partition,_and_FtsK_domain


id: CL:580
description: Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:580_Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:581
description: Cellular amino acid biosynthetic process, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:581_Cellular_amino_acid_biosynthetic_process,_and_Aminotransferase,_class_I/classII


id: CL:582
description: Cellular amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:582_Cellular_amino_acid_biosynthetic_process


id: CL:583
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:583_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Valine,_leucine_and_isoleucine_biosynthesis

description:
  Phenylalanine, tyrosine and tryptophan biosynthesis, and Valine, leucine and isoleucine biosynthesis


id: CL:619
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:619_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:621
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:621_C5-Branched_dibasic_acid_metabolism,_and_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer

description:
  C5-Branched dibasic acid metabolism, and Acyltransferase activity, acyl groups converted into alkyl on transfer


id: CL:642
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:642_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:643
description: Lysine biosynthetic process, and Ornithine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:643_Lysine_biosynthetic_process,_and_Ornithine_metabolic_process


id: CL:645
description: Monobactam biosynthesis, and Alanine racemase/group IV decarboxylase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:645_Monobactam_biosynthesis,_and_Alanine_racemase/group_IV_decarboxylase,_C-terminal


id: CL:668
description: Proline metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:668_Proline_metabolic_process,_and_Nitrogen_metabolism


id: CL:690
description: Cysteine and methionine metabolism, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:690_Cysteine_and_methionine_metabolism,_and_L-serine_biosynthetic_process


id: CL:692
description: Transsulfuration, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:692_Transsulfuration,_and_Threonine_biosynthesis


id: CL:722
description: Nucleoside monophosphate metabolic process, and Cellular modified amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:722_Nucleoside_monophosphate_metabolic_process,_and_Cellular_modified_amino_acid_metabolic_process


id: CL:724
description: Nucleoside monophosphate metabolic process, and Tetrahydrofolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:724_Nucleoside_monophosphate_metabolic_process,_and_Tetrahydrofolate_metabolic_process


id: CL:725
description: Ribonucleoside monophosphate metabolic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:725_Ribonucleoside_monophosphate_metabolic_process,_and_One_carbon_pool_by_folate


id: CL:726
description: Purine biosynthesis, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:726_Purine_biosynthesis,_and_One_carbon_pool_by_folate


id: CL:727
description: Purine nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:727_Purine_nucleoside_monophosphate_metabolic_process


id: CL:748
description: GMP biosynthetic process, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:748_GMP_biosynthetic_process,_and_Nucleotidase_activity


id: CL:760
description: One-carbon metabolic process, and dTTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:760_One-carbon_metabolic_process,_and_dTTP_metabolic_process


id: CL:776
description: De novo UMP biosynthetic process, and 2Fe-2S ferredoxin, iron-sulphur binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:776_De_novo_UMP_biosynthetic_process,_and_2Fe-2S_ferredoxin,_iron-sulphur_binding_site


id: CL:797
description: Deoxyribonucleotide metabolic process, and Nucleobase-containing compound kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:797_Deoxyribonucleotide_metabolic_process,_and_Nucleobase-containing_compound_kinase_activity


id: CL:814
description: Vitamin metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:814_Vitamin_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:815
description: Vitamin metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:815_Vitamin_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:816
description: Riboflavin metabolism, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:816_Riboflavin_metabolism,_and_Folic_acid_metabolic_process


id: CL:837
description: Coenzyme A metabolic process, and Pantothenate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:837_Coenzyme_A_metabolic_process,_and_Pantothenate_biosynthesis


id: CL:850
description: RelA/SpoT, and GTP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:850_RelA/SpoT,_and_GTP_cyclohydrolase_activity


id: CL:859
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:859_Mixed,_incl._Cellular_detoxification,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors

description:
  Mixed, incl. Cellular detoxification, and Oxidoreductase activity, acting on a sulfur group of donors


id: CL:861
description: Disulfide oxidoreductase activity, and Cellular oxidant detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:861_Disulfide_oxidoreductase_activity,_and_Cellular_oxidant_detoxification


id: CL:862
description: Thioredoxin domain, and Reactive oxygen species metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:862_Thioredoxin_domain,_and_Reactive_oxygen_species_metabolic_process


id: CL:864
description: Thioredoxin domain, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:864_Thioredoxin_domain,_and_Thioredoxin-like_fold


id: CL:88
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:88_Ribosome,_and_Translation_regulator_activity


id: CL:892
description: Mixed, incl. AMP-binding enzyme, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:892_Mixed,_incl._AMP-binding_enzyme,_and_Response_to_superoxide


id: CL:90
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:90_Ribosome,_and_Translation_regulator_activity


id: CL:91
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:91_Ribosome,_and_Translational_elongation


id: CL:911
description: Glutathione metabolism, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:911_Glutathione_metabolism,_and_Peptidase_M24


id: CL:926
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:926_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Monocarboxylic_acid_metabolic_process

description:
  Mixed, incl. Generation of precursor metabolites and energy, and Monocarboxylic acid metabolic process


id: CL:928
description: Mixed, incl. Oxidative phosphorylation, and Monocarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:928_Mixed,_incl._Oxidative_phosphorylation,_and_Monocarboxylic_acid_metabolic_process


id: CL:929
description: Mixed, incl. Oxidative phosphorylation, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:929_Mixed,_incl._Oxidative_phosphorylation,_and_Fatty_acid_metabolic_process


id: CL:930
description: Oxidative phosphorylation, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:930_Oxidative_phosphorylation,_and_Pyruvate_metabolism


id: CL:931
description: Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:931_Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:932
description: Citrate cycle (TCA cycle), and Malate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:932_Citrate_cycle_(TCA_cycle),_and_Malate_dehydrogenase_activity


id: CL:933
description: Tricarboxylic acid cycle, and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:933_Tricarboxylic_acid_cycle,_and_Malic_oxidoreductase


id: CL:964
description: Lysine degradation, and Dehydrogenase E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:964_Lysine_degradation,_and_Dehydrogenase_E1_component


id: CL:981
description: Propanoate metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:981_Propanoate_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:982
description: CoA carboxylase activity, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:982_CoA_carboxylase_activity,_and_Taurine_and_hypotaurine_metabolism


id: CL:995
description: Propionate metabolic process, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_641147_STRINGid_CL:995_Propionate_metabolic_process,_and_Valine,_leucine_and_isoleucine_degradation


id: GO:0000122
description: Negative regulation of transcription by RNA polymerase II
memo: https://amigo.geneontology.org/amigo/term/GO:0000122
golevel: 12
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0000122_Negative_regulation_of_transcription_by_RNA_polymerase_II


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004174
description: Electron-transferring-flavoprotein dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004174
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004174_Electron-transferring-flavoprotein_dehydrogenase_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008803
description: bis(5-nucleosyl)-tetraphosphatase (symmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008803
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008803_bis(5-nucleosyl)-tetraphosphatase_(symmetrical)_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008882
description: [Glutamate-ammonia-ligase] adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008882
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008882_[Glutamate-ammonia-ligase]_adenylyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009013
description: Succinate-semialdehyde dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009013
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0009013_Succinate-semialdehyde_dehydrogenase_[NAD(P)+]_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016649
memo: https://amigo.geneontology.org/amigo/term/GO:0016649
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016649_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016767
description: Geranylgeranyl-diphosphate geranylgeranyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016767
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016767_Geranylgeranyl-diphosphate_geranylgeranyltransferase_activity


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016898
description: Oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016898
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016898_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_cytochrome_as_acceptor


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019177
description: Dihydroneopterin triphosphate pyrophosphohydrolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019177
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0019177_Dihydroneopterin_triphosphate_pyrophosphohydrolase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019294
description: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019294
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0019294_keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0030697
description: S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030697
golevel: 9
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0030697_S-adenosylmethionine-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031246
description: Intrinsic component of periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031246
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0031246_Intrinsic_component_of_periplasmic_side_of_cell_outer_membrane


id: GO:0032297
description: Negative regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0032297
golevel: 11
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0032297_Negative_regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033512
description: L-lysine catabolic process to acetyl-CoA via saccharopine
memo: https://amigo.geneontology.org/amigo/term/GO:0033512
golevel: 13
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0033512_L-lysine_catabolic_process_to_acetyl-CoA_via_saccharopine


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0034040
description: ATPase-coupled lipid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034040
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0034040_ATPase-coupled_lipid_transmembrane_transporter_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035539
description: 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035539
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0035539_8-oxo-7,8-dihydrodeoxyguanosine_triphosphate_pyrophosphatase_activity


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043165
description: Gram-negative-bacterium-type cell outer membrane assembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043165
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0043165_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
golevel: 8
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043467
description: Regulation of generation of precursor metabolites and energy
memo: https://amigo.geneontology.org/amigo/term/GO:0043467
golevel: 5
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0043467_Regulation_of_generation_of_precursor_metabolites_and_energy


id: GO:0043709
description: Cell adhesion involved in single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:0043709
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0043709_Cell_adhesion_involved_in_single-species_biofilm_formation


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046400
description: keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0046400
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0046400_keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047388
description: [Glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
memo: https://amigo.geneontology.org/amigo/term/GO:0047388
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0047388_[Glutamine_synthetase]-adenylyl-L-tyrosine_phosphorylase


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051712
description: Positive regulation of killing of cells of another organism
memo: https://amigo.geneontology.org/amigo/term/GO:0051712
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0051712_Positive_regulation_of_killing_of_cells_of_another_organism


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052042
description: Positive regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052042
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0052042_Positive_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052151
description: Positive regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0052151
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0052151_Positive_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_641147_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097171
description: ADP-L-glycero-beta-D-manno-heptose biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097171
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0097171_ADP-L-glycero-beta-D-manno-heptose_biosynthetic_process


id: GO:0097174
description: 1,6-anhydro-N-acetyl-beta-muramic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097174
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0097174_1,6-anhydro-N-acetyl-beta-muramic_acid_metabolic_process


id: GO:0097175
description: 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097175
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0097175_1,6-anhydro-N-acetyl-beta-muramic_acid_catabolic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0106321
description: S-(hydroxymethyl)glutathione dehydrogenase NADP activity
memo: https://amigo.geneontology.org/amigo/term/GO:0106321
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0106321_S-(hydroxymethyl)glutathione_dehydrogenase_NADP_activity


id: GO:0106322
description: S-(hydroxymethyl)glutathione dehydrogenase NAD activity
memo: https://amigo.geneontology.org/amigo/term/GO:0106322
golevel: 6
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0106322_S-(hydroxymethyl)glutathione_dehydrogenase_NAD_activity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_641147_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902201
description: Negative regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902201
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1902201_Negative_regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
golevel: 9
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1902533
description: Positive regulation of intracellular signal transduction
memo: https://amigo.geneontology.org/amigo/term/GO:1902533
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1902533_Positive_regulation_of_intracellular_signal_transduction


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904951
description: Positive regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904951
golevel: 7
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1904951_Positive_regulation_of_establishment_of_protein_localization


id: GO:1990961
description: Xenobiotic detoxification by transmembrane export across the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:1990961
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:1990961_Xenobiotic_detoxification_by_transmembrane_export_across_the_plasma_membrane


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2001060
description: D-glycero-D-manno-heptose 7-phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001060
golevel: 5
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:2001060_D-glycero-D-manno-heptose_7-phosphate_metabolic_process


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_641147_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000178
description: Exosome (RNase complex)
memo: https://amigo.geneontology.org/amigo/term/GO:0000178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0000178_Exosome_(RNase_complex)


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005791
description: Rough endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005791
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005791_Rough_endoplasmic_reticulum


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005881
description: Cytoplasmic microtubule
memo: https://amigo.geneontology.org/amigo/term/GO:0005881
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005881_Cytoplasmic_microtubule


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008023
description: Transcription elongation factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0008023_Transcription_elongation_factor_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009325
description: Nitrate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009325_Nitrate_reductase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015629
description: Actin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015629
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0015629_Actin_cytoskeleton


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019037
description: Viral assembly intermediate
memo: https://amigo.geneontology.org/amigo/term/GO:0019037
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0019037_Viral_assembly_intermediate


id: GOCC:0019812
description: Type I site-specific deoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019812
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0019812_Type_I_site-specific_deoxyribonuclease_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030256
description: Type I protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030256
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030256_Type_I_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031026
description: Glutamate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031026
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031026_Glutamate_synthase_complex


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031230
description: Intrinsic component of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031230_Intrinsic_component_of_cell_outer_membrane


id: GOCC:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GOCC:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GOCC:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GOCC:0031240
description: External side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031240
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031240_External_side_of_cell_outer_membrane


id: GOCC:0031241
description: Periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031241
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031241_Periplasmic_side_of_cell_outer_membrane


id: GOCC:0031246
description: Intrinsic component of periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031246
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031246_Intrinsic_component_of_periplasmic_side_of_cell_outer_membrane


id: GOCC:0031248
description: Protein acetyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031248
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031248_Protein_acetyltransferase_complex


id: GOCC:0031300
description: Intrinsic component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031300_Intrinsic_component_of_organelle_membrane


id: GOCC:0031301
description: Integral component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031301
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031301_Integral_component_of_organelle_membrane


id: GOCC:0031304
description: Intrinsic component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031304
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031304_Intrinsic_component_of_mitochondrial_inner_membrane


id: GOCC:0031305
description: Integral component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031305
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031305_Integral_component_of_mitochondrial_inner_membrane


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031414
description: N-terminal protein acetyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031414
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031414_N-terminal_protein_acetyltransferase_complex


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031471
description: Ethanolamine degradation polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031471_Ethanolamine_degradation_polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031522
description: Cell envelope Sec protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031522
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031522_Cell_envelope_Sec_protein_transport_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031901
description: Early endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031901
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031901_Early_endosome_membrane


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032592
description: Integral component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0032592
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0032592_Integral_component_of_mitochondrial_membrane


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_641147_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


