# geneInfo

ensembl_gene_id: Slip_1164
symbol: Slip_1164
gene_biotype: protein_coding
description:
  COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845; KEGG: swo:Swol_1160 phosphorylase family 2 protein; PFAM: purine or other phosphorylase family 1; SPTR: Q0AXT5 Phosphorylase, family 2; PFAM: Phosphorylase superfamily.


ensembl_gene_id: Slip_1165
symbol: mqnC
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Slip_1166
symbol: mqnA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Slip_1167
symbol: mqnE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: Slip_1168
symbol: Slip_1168
gene_biotype: protein_coding
description:
  ABC transporter, ATPase, predicted; COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: pth:PTH_0556 ATPase; PFAM: ABC transporter, ATPase, predicted; SPTR: A5D4V0 Predicted ATPase; PFAM: Predicted ATPase of the ABC class.


ensembl_gene_id: Slip_1169
symbol: Slip_1169
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rpc:RPC_3872 aminotransferase, class V; SPTR: C6MLR9 Seryl-tRNA synthetase.


ensembl_gene_id: Slip_1171
symbol: Slip_1171
gene_biotype: protein_coding
description:
  PHP domain protein; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR003141:IPR004013:IPR016195; KEGG: mta:Moth_1141 PHP-like; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: Q2RJD4 PHP-like; PFAM: PHP domain.


ensembl_gene_id: Slip_1172
symbol: Slip_1172
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1101 ABC-type uncharacterized transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: swo:Swol_0323 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0B039 Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Slip_1173
symbol: Slip_1173
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG4120 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: swo:Swol_0324 hypothetical protein; PFAM: inner-membrane translocator; SPTR: Q0B038 Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Slip_1174
symbol: Slip_1174
gene_biotype: protein_coding
description:
  Protein of unknown function DUF534; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: swo:Swol_0325 hypothetical protein; PFAM: protein of unknown function DUF534; SPTR: Q0B037 Putative uncharacterized protein; PFAM: ABC transporter substrate binding protein.


ensembl_gene_id: Slip_1175
symbol: Slip_1175
gene_biotype: protein_coding
description:
  Protein of unknown function DUF124; COGs: COG2013 conserved hypothetical protein; InterPro IPR002838:IPR016031; KEGG: sth:STH841 hypothetical protein; PFAM: protein of unknown function DUF124; SPTR: Q67R67 Putative uncharacterized protein; PFAM: Protein of unknown function DUF124; TIGRFAM: conserved hypothetical protein TIGR00266.


ensembl_gene_id: Slip_1177
symbol: Slip_1177
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tte:TTE1274 fimbrial assembly protein; SPTR: Q8RAE9 Fimbrial assembly protein; PFAM: Pilus assembly protein, PilO.


ensembl_gene_id: Slip_1178
symbol: Slip_1178
gene_biotype: protein_coding
description:
  InterPro IPR007813; KEGG: smt:Smal_3239 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: C6P870 Fimbrial assembly family protein; PFAM: Fimbrial assembly protein (PilN).


ensembl_gene_id: Slip_1179
symbol: Slip_1179
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cdl:CDR20291_3347 putative membrane protein; SPTR: Q181A8 Putaive membrane protein.


ensembl_gene_id: Slip_1180
symbol: Slip_1180
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cpy:Cphy_1800 glycoside hydrolase family protein; SPTR: A9KSD7 Glycoside hydrolase family 18.


ensembl_gene_id: Slip_1181
symbol: Slip_1181
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR001120:IPR012902; KEGG: nth:Nther_2095 hypothetical protein; SPTR: A3ZWZ5 Putative uncharacterized protein; manually curated; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_1182
symbol: Slip_1182
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR001120:IPR012902; KEGG: bav:BAV0340 general secretion pathway protein I; SPTR: B4X1B2 General secretion pathway protein I; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_1183
symbol: Slip_1183
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR012902; KEGG: mmr:Mmar10_2777 hypothetical protein; SPTR: Q0AKY4 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_1184
symbol: Slip_1184
gene_biotype: protein_coding
description:
  Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076:IPR003004; KEGG: dsy:DSY2411 hypothetical protein; PFAM: Type II secretion system F domain; SPTR: Q24UU2 Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Slip_1185
symbol: Slip_1185
gene_biotype: protein_coding
description:
  COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482; KEGG: tte:TTE1262 pili biogenesis protein PilB-like ATPase; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: Q8RAG1 Predicted ATPases involved in pili biogenesis, PilB homologs; PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E.


ensembl_gene_id: Slip_1186
symbol: Slip_1186
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR001120:IPR012902; KEGG: ckr:CKR_1012 hypothetical protein; SPTR: B9E0N8 Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_1187
symbol: Slip_1187
gene_biotype: protein_coding
description:
  Prepilin peptidase; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: dau:Daud_0967 peptidase A24A domain-containing protein; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; PRIAM: Prepilin peptidase; SPTR: B1I3C2 Peptidase A24A domain protein; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family.


ensembl_gene_id: Slip_1188
symbol: Slip_1188
gene_biotype: protein_coding
description:
  Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482:IPR003593:IPR006321; KEGG: adg:Adeg_1724 twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: C9R937 Twitching motility protein; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.


ensembl_gene_id: Slip_1189
symbol: Slip_1189
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: cac:CA_P0048 related to methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q97TQ0 Related to methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_1190
symbol: Slip_1190
gene_biotype: protein_coding
description:
  PilT protein domain protein; InterPro IPR002716; KEGG: pth:PTH_0364 nucleic acid-binding protein; PFAM: PilT protein domain protein; SPTR: A5D5C6 Predicted nucleic acid-binding protein; PFAM: PIN domain.


ensembl_gene_id: Slip_1191
symbol: Slip_1191
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; InterPro IPR007159:IPR006339; KEGG: pth:PTH_0363 regulatory protein; PFAM: SpoVT/AbrB domain protein; SPTR: A5D5C5 Hypothetical regulator protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_1192
symbol: Slip_1192
gene_biotype: protein_coding
description:
  Coenzyme A transferase; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165; KEGG: oca:OCAR_6775 3-oxoadipate:succinyl-CoA transferase subunit B; PFAM: coenzyme A transferase; SPTR: A8VSU9 ABC transporter related; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1193
symbol: Slip_1193
gene_biotype: protein_coding
description:
  Coenzyme A transferase; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; Contains selenocysteine; InterPro IPR004165; KEGG: xau:Xaut_5072 coenzyme A transferase; PFAM: coenzyme A transferase; SPTR: C8S5T7 Coenzyme A transferase; manually curated; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1194
symbol: Slip_1194
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR016196; KEGG: mmz:MmarC7_0080 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8TFU9 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Slip_1195
symbol: Slip_1195
gene_biotype: protein_coding
description:
  3-oxoadipate CoA-transferase; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165; KEGG: rpt:Rpal_2560 coenzyme A transferase; PFAM: coenzyme A transferase; PRIAM: 3-oxoadipate CoA-transferase; SPTR: B3QFK0 Coenzyme A transferase; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1196
symbol: Slip_1196
gene_biotype: protein_coding
description:
  Coenzyme A transferase; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165; KEGG: rpa:RPA2318 glutaconate CoA-transferase, subunit A; PFAM: coenzyme A transferase; SPTR: Q6N7E0 Possible glutaconate CoA-transferase, subunit A; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1198
symbol: Slip_1198
gene_biotype: protein_coding
description:
  COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: dde:Dde_1208 succinate dehydrogenase subunit C; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: Q312Y7 Succinate dehydrogenase subunit C; PFAM: Cysteine-rich domain.


ensembl_gene_id: Slip_1199
symbol: Slip_1199
gene_biotype: protein_coding
description:
  COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR017900:IPR009051:IPR012285; KEGG: chy:CHY_0927 putative heterodisulfide reductase, C subunit; SPTR: Q3ADL0 Putative heterodisulfide reductase, C subunit.


ensembl_gene_id: Slip_1200
symbol: Slip_1200
gene_biotype: protein_coding
description:
  Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953:IPR013027:IPR000103:IPR016040; KEGG: plt:Plut_1109 heterodisulfide reductase, subunit A; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Q3B3W0 Heterodisulfide reductase, subunit A; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Slip_1201
symbol: Slip_1201
gene_biotype: protein_coding
description:
  COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: mfe:Mefer_1123 CoB/CoM heterodisulfide reductase, subunit B; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: Q647Y6 Heterodisulfide reductase subunit B; PFAM: Cysteine-rich domain.


ensembl_gene_id: Slip_1202
symbol: Slip_1202
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1150 Heterodisulfide reductase subunit C; InterProIPR017900:IPR001450:IPR009051:IPR012285:IPR 017896; KEGG: mma:MM_0388 heterodisulfide reductase subunit HdrC; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q8PZV1 Heterodisulfide reductase subunit HdrC.


ensembl_gene_id: Slip_1203
symbol: Slip_1203
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR000644:IPR000014:IPR003593:IPR 013767:IPR002197:IPR020441:IPR009057:IPR013785; KEGG: nth:Nther_2181 putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; CBS domain containing protein; SPTR: B2A7X5 Putative sigma [...]


ensembl_gene_id: Slip_1205
symbol: Slip_1205
gene_biotype: protein_coding
description:
  COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: mtp:Mthe_0463 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily; SPTR: A0B6D0 Histone deacetylase superfamily; PFAM: Histone deacetylase domain.


ensembl_gene_id: Slip_1206
symbol: Slip_1206
gene_biotype: protein_coding
description:
  COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 004540:IPR005225:IPR020568:IPR009000:IPR009022:IPR014721; KEGG: swo:Swol_1152 elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; SPTR: Q0AXU2 Translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation  [...]


ensembl_gene_id: Slip_1208
symbol: surE
gene_biotype: protein_coding
description:
  Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: Slip_1209
symbol: Slip_1209
gene_biotype: protein_coding
description:
  COGs: COG0681 Signal peptidase I; InterProIPR019756:IPR019757:IPR019758:IPR019759:IPR 000223:IPR015927:IPR011056; KEGG: swo:Swol_1149 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Q0AXU5 Thylakoidal processing peptidase. Serine peptidase. MEROPS family S26A; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.


ensembl_gene_id: Slip_1211
symbol: folE
gene_biotype: protein_coding
description:
  COGs: COG0302 GTP cyclohydrolase I; InterPro IPR018234:IPR020602:IPR001474; KEGG: chy:CHY_0955 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: Q3ADI2 GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I.


ensembl_gene_id: Slip_1212
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Slip_1213
symbol: Slip_1213
gene_biotype: protein_coding
description:
  Protein of unknown function DUF366; COGs: COG2029 conserved hypothetical protein; InterPro IPR007162; KEGG: hmo:HM1_2554 hypothetical protein; PFAM: protein of unknown function DUF366; SPTR: B0TAY0 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF366).


ensembl_gene_id: Slip_1214
symbol: queC
gene_biotype: protein_coding
description:
  exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: Slip_1215
symbol: Slip_1215
gene_biotype: protein_coding
description:
  COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: adg:Adeg_0590 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: C9RBW1 Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein.


ensembl_gene_id: Slip_1216
symbol: Slip_1216
gene_biotype: protein_coding
description:
  Protein of unknown function DUF606; COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: swo:Swol_1140 hypothetical protein; PFAM: protein of unknown function DUF606; SPTR: Q0AXV4 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF606.


ensembl_gene_id: Slip_1217
symbol: Slip_1217
gene_biotype: protein_coding
description:
  Zinc/iron permease; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: swo:Swol_1139 hypothetical protein; PFAM: zinc/iron permease; SPTR: Q0AXV5 Putative uncharacterized protein; PFAM: ZIP Zinc transporter.


ensembl_gene_id: Slip_1218
symbol: Slip_1218
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cbb:CLD_0425 radical SAM domain-containing protein; SPTR: C1FRK9 Radical SAM domain protein.


ensembl_gene_id: Slip_1219
symbol: Slip_1219
gene_biotype: protein_coding
description:
  Protein of unknown function DUF81; InterPro IPR002781; KEGG: syn:sll1052 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: B4WTF5 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE.


ensembl_gene_id: Slip_1220
symbol: Slip_1220
gene_biotype: protein_coding
description:
  Copper ion binding protein; COGs: COG2608 Copper chaperone; InterPro IPR017969:IPR006121:IPR001877:IPR006122; KEGG: afl:Aflv_1219 copper-ion-binding protein; PFAM: Heavy metal transport/detoxification protein; SPTR: B7GJE3 Copper-ion-binding protein; TIGRFAM: copper ion binding protein; PFAM: Heavy-metal-associated domain.


ensembl_gene_id: Slip_1222
symbol: Slip_1222
gene_biotype: protein_coding
description:
  ABC-2 type transporter; InterPro IPR013525:IPR013526:IPR000412; KEGG: chy:CHY_0901 daunorubicin resistance ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: Q3ADN4 Daunorubicin resistance ABC transporter, permease protein; PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein.


ensembl_gene_id: Slip_1223
symbol: Slip_1223
gene_biotype: protein_coding
description:
  Daunorubicin resistance ABC transporter ATPase subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439:IPR005894; KEGG: chy:CHY_0900 daunorubicin resistance ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q3ADN5 Daunorubicin resistance ABC transporter, ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.


ensembl_gene_id: Slip_1225
symbol: Slip_1225
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099:IPR003148:IPR006037:IPR016040; KEGG: drm:Dred_0471 TrkA domain-containing protein; PFAM: TrkA-N domain protein; Ion transport 2 domain protein; TrkA-C domain protein; SPTR: A4J1R4 TrkA-N domain protein; PFAM: TrkA-N domain; Ion channel; TrkA-C domain.


ensembl_gene_id: Slip_1226
symbol: Slip_1226
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1131 hypothetical protein; SPTR: Q0AXW3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3343).


ensembl_gene_id: Slip_1227
symbol: Slip_1227
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: swo:Swol_1130 uncharacterized aromatic compound catabolism protein; PFAM: thioesterase superfamily protein; SPTR: Q0AXW4 Uncharacterized aromatic compound catabolism protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Slip_1228
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Slip_1229
symbol: Slip_1229
gene_biotype: protein_coding
description:
  InterPro IPR010897; KEGG: swo:Swol_1127 putative stage II sporulation protein P; PFAM: Stage II sporulation P family protein; SPTR: Q0AXW7 Putative stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.


ensembl_gene_id: Slip_1231
symbol: Slip_1231
gene_biotype: protein_coding
description:
  KEGG: drm:Dred_3084 hypothetical protein; SPTR: A4J933 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2922).


ensembl_gene_id: Slip_1232
symbol: Slip_1232
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1659; InterPro IPR012454; KEGG: swo:Swol_0754 hypothetical protein; PFAM: protein of unknown function DUF1659; SPTR: Q0AYX8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1659).


ensembl_gene_id: Slip_1233
symbol: Slip_1233
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR003593:IPR002197:IPR020441:IPR 009057:IPR000014; KEGG: swo:Swol_0437 hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Q0AZS9 Putative uncharacterized protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: Slip_1234
symbol: Slip_1234
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: drm:Dred_1492 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: A4J4L9 Short chain enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_1236
symbol: Slip_1236
gene_biotype: protein_coding
description:
  Propanoyl-CoA C-acyltransferase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: mav:MAV_5079 acetyl-CoA acetyltransferase; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: B5HPG3 Acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_1237
symbol: Slip_1237
gene_biotype: protein_coding
description:
  Protein of unknown function DUF35; COGs: COG3425 3-hydroxy-3-methylglutaryl CoA synthase; InterPro IPR016039:IPR013747:IPR002878; KEGG: dal:Dalk_3911 protein of unknown function DUF35; PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; SPTR: B8FJC8 Putative uncharacterized protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; DUF35 OB-fold domain.


ensembl_gene_id: Slip_1238
symbol: Slip_1238
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR006176:IPR006108:IPR 013328; KEGG: drm:Dred_1890 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: A4J5Q9 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Slip_1239
symbol: Slip_1239
gene_biotype: protein_coding
description:
  Glutaconate CoA-transferase; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165; KEGG: drm:Dred_1891 glutaconate CoA-transferase; PFAM: coenzyme A transferase; PRIAM: Glutaconate CoA-transferase; SPTR: A4J5R0 Glutaconate CoA-transferase; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1240
symbol: Slip_1240
gene_biotype: protein_coding
description:
  Coenzyme A transferase; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165; KEGG: afu:AF1199 glutaconate CoA-transferase, subunit A (GctA); PFAM: coenzyme A transferase; SPTR: O29069 Uncharacterized protein AF_1199; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1241
symbol: Slip_1241
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006092:IPR006091:IPR 006090:IPR006089:IPR013786:IPR013764; KEGG: drm:Dred_1490 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: A1HTC4 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_1242
symbol: Slip_1242
gene_biotype: protein_coding
description:
  L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: oih:OB2671 hypothetical protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: Q8EN19 Hypothetical conserved protein; PFAM: CoA-transferase family III.


ensembl_gene_id: Slip_1243
symbol: Slip_1243
gene_biotype: protein_coding
description:
  Putative sigma54 specific transcriptional regulator; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR009057:IPR002078:IPR000014:IPR000700:IPR 000644:IPR013767:IPR003593:IPR012287; KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; SMART: CBS domain containing protein; PAS domain containing protein; AAA ATPase; SPTR: Q0AWW3 Sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFA [...]


ensembl_gene_id: Slip_1244
symbol: Slip_1244
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pas:Pars_1039 zinc finger, RanBP2-type; SPTR: B0MCF1 Putative uncharacterized protein.


ensembl_gene_id: Slip_1245
symbol: Slip_1245
gene_biotype: protein_coding
description:
  FHA domain containing protein; InterPro IPR008984:IPR000253; KEGG: ere:EUBREC_1112 hypothetical protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C4ZH62 Putative uncharacterized protein; PFAM: FHA domain.


ensembl_gene_id: Slip_1247
symbol: Slip_1247
gene_biotype: protein_coding
description:
  COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR000719:IPR017442:IPR017441:IPR 020635:IPR002290; KEGG: rca:Rcas_2393 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A7NLS7 Serine/threonine protein kinase; PFAM: Protein kinase domain.


ensembl_gene_id: Slip_1248
symbol: Slip_1248
gene_biotype: protein_coding
description:
  Transcriptional regulator, CadC; COGs: COG3710 DNA-binding winged-HTH domains; InterProIPR008984:IPR016032:IPR000253:IPR001867:IPR 011991; KEGG: bcl:ABC3482 hypothetical protein; PFAM: transcriptional regulator domain protein; Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Q5WC95 Putative uncharacterized protein; PFAM: Transcriptional regulatory protein, C terminal; FHA domain.


ensembl_gene_id: Slip_1249
symbol: Slip_1249
gene_biotype: protein_coding
description:
  Amidohydrolase 3; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: cpo:COPRO5265_1117 amidohydrolase family; PFAM: Amidohydrolase 3; SPTR: B5Y9H8 Amidohydrolase family; manually curated; PFAM: Amidohydrolase family.


ensembl_gene_id: Slip_1250
symbol: Slip_1250
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010:IPR004090; KEGG: hor:Hore_04800 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: B8D211 Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_1251
symbol: Slip_1251
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: bbe:BBR47_52070 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: C0Z6I5 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Slip_1253
symbol: Slip_1253
gene_biotype: protein_coding
description:
  COGs: COG3764 Sortase (surface protein transpeptidase); InterPro IPR005754; KEGG: nth:Nther_2116 sortase family protein; PFAM: peptidase C60 sortase A and B; SPTR: B2A7H4 Sortase family protein; TIGRFAM: sortase family protein; PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein.


ensembl_gene_id: Slip_1254
symbol: Slip_1254
gene_biotype: protein_coding
description:
  KEGG: tcu:Tcur_4831 hypothetical protein; SPTR: D1A7E3 Putative uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain.


ensembl_gene_id: Slip_1256
symbol: Slip_1256
gene_biotype: protein_coding
description:
  Peptidase S26B, signal peptidase; InterPro IPR015927:IPR019759:IPR001733:IPR011056; KEGG: amt:Amet_0492 peptidase S26B, signal peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: A6TKK1 Peptidase S26B, signal peptidase; TIGRFAM: peptidase S26B, signal peptidase; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type.


ensembl_gene_id: Slip_1257
symbol: Slip_1257
gene_biotype: protein_coding
description:
  PA14 domain protein; InterPro IPR011658; KEGG: rci:RCIX1696 hypothetical protein; PFAM: PA14 domain protein; SMART: PA14 domain protein; SPTR: Q0W3X5 Putative uncharacterized protein; PFAM: PA14 domain; TIGRFAM: fibro-slime domain.


ensembl_gene_id: Slip_1261
symbol: Slip_1261
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR016032:IPR011006:IPR000792:IPR011991; KEGG: dae:Dtox_3277 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C8W5L1 Transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.


ensembl_gene_id: Slip_1262
symbol: Slip_1262
gene_biotype: protein_coding
description:
  COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: chy:CHY_2516 transglutaminase family protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: Q2BET2 Transglutaminase family protein; PFAM: Transglutaminase-like superfamily.


ensembl_gene_id: Slip_1264
symbol: Slip_1264
gene_biotype: protein_coding
description:
  Protein of unknown function DUF433; COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: pth:PTH_0705 hypothetical protein; PFAM: protein of unknown function DUF433; SPTR: A5D4F5 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF433).


ensembl_gene_id: Slip_1265
symbol: Slip_1265
gene_biotype: protein_coding
description:
  COGs: COG4634 conserved hypothetical protein; KEGG: mar:MAE_49650 hypothetical protein; SPTR: A8YC27 Similar to tr|A0ZC99|A0ZC99_NODSP Hypothetical protein.


ensembl_gene_id: Slip_1270
symbol: Slip_1270
gene_biotype: protein_coding
description:
  SMC domain protein; COGs: COG3593 ATP-dependent endonuclease of the OLD family; InterPro IPR003395:IPR007087; KEGG: ele:Elen_0801 SMC domain protein; PFAM: SMC domain protein; SPTR: C8WNB5 SMC domain protein.


ensembl_gene_id: Slip_1273
symbol: Slip_1273
gene_biotype: protein_coding
description:
  PglZ domain protein; InterPro IPR013973; KEGG: pth:PTH_0717 hypothetical protein; PFAM: PglZ domain protein; SPTR: A5D4D3 Putative uncharacterized protein; PFAM: PglZ domain.


ensembl_gene_id: Slip_1274
symbol: Slip_1274
gene_biotype: protein_coding
description:
  DNA methylase N-4/N-6 domain protein; InterPro IPR002941:IPR002052; KEGG: pth:PTH_0715 hypothetical protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: A5D4D1 Putative uncharacterized protein; PFAM: DNA methylase.


ensembl_gene_id: Slip_1277
symbol: Slip_1277
gene_biotype: protein_coding
description:
  InterPro IPR007159:IPR006339; KEGG: aac:Aaci_1206 transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; SPTR: C8WVW5 Transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_1278
symbol: Slip_1278
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0175; InterPro IPR005368; KEGG: pth:PTH_0695 hypothetical protein; PFAM: protein of unknown function UPF0175; SPTR: A5D4E5 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0175).


ensembl_gene_id: Slip_1279
symbol: Slip_1279
gene_biotype: protein_coding
description:
  COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: pth:PTH_0694 nucleic acid-binding protein; SPTR: A5D4E4 Predicted nucleic acid-binding protein; PFAM: Domain of unknown function (DUF3368).


ensembl_gene_id: Slip_1281
symbol: mtaD
gene_biotype: protein_coding
description:
  Amidohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: Slip_1282
symbol: Slip_1282
gene_biotype: protein_coding
description:
  Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: adg:Adeg_0966 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: C9RCX4 Class II aldolase/adducin family protein; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.


ensembl_gene_id: Slip_1283
symbol: mtnA
gene_biotype: protein_coding
description:
  Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: Slip_1284
symbol: Slip_1284
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: Slip_1285
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: Slip_1286
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Slip_1287
symbol: birA
gene_biotype: protein_coding
description:
  biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: Slip_1288
symbol: Slip_1288
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1243 Histone acetyltransferase; InterPro IPR007197:IPR006638:IPR013785; KEGG: swo:Swol_0774 ELP3 component of the RNA polymerase II complex; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AYV9 ELP3 component of the RNA polymerase II complex; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_1289
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Slip_1290
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: Slip_1291
symbol: rpmF
gene_biotype: protein_coding
description:
  COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: swo:Swol_0770 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: Q0AYW3 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: Slip_1292
symbol: Slip_1292
gene_biotype: protein_coding
description:
  Protein of unknown function DUF177; COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: dhd:Dhaf_3825 protein of unknown function DUF177; PFAM: protein of unknown function DUF177; SPTR: B8FRT1 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399.


ensembl_gene_id: Slip_1296
symbol: Slip_1296
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ctc:CTC01986 membrane spanning protein; SPTR: Q892V0 Membrane spanning protein.


ensembl_gene_id: Slip_1297
symbol: Slip_1297
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: nth:Nther_0997 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0GJV6 ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Slip_1298
symbol: Slip_1298
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524:IPR011991; KEGG: nth:Nther_0996 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: B2A0M2 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family.


ensembl_gene_id: Slip_1299
symbol: Slip_1299
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR013026:IPR013105:IPR011990; KEGG: ckr:CKR_1967 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: Q2BA67 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.


ensembl_gene_id: Slip_1300
symbol: Slip_1300
gene_biotype: protein_coding
description:
  Copper amine oxidase domain protein; InterPro IPR012854; KEGG: pth:PTH_0764 hypothetical protein; PFAM: copper amine oxidase domain protein; SPTR: A5D4A4 Hypothetical membrane protein; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_1301
symbol: Slip_1301
gene_biotype: protein_coding
description:
  KEGG: pth:PTH_0397 cytotoxic translational repressor; SPTR: A5D589 Cytotoxic translational repressor.


ensembl_gene_id: Slip_1302
symbol: Slip_1302
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; InterPro IPR007159:IPR006339; KEGG: pth:PTH_0396 hypothetical protein; PFAM: SpoVT/AbrB domain protein; SPTR: A5D588 Putative uncharacterized protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_1303
symbol: Slip_1303
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR011044; KEGG: wd-repeat protein; K12857 Prp8 binding protein; SPTR: B5W1Y6 WD-40 repeat protein.


ensembl_gene_id: Slip_1304
symbol: Slip_1304
gene_biotype: protein_coding
description:
  WD40 domain protein beta Propeller; InterPro IPR004106:IPR012854:IPR011659:IPR011042; KEGG: mta:Moth_2083 copper amine oxidase-like; PFAM: WD40 domain protein beta Propeller; SPTR: Q2RGR3 Copper amine oxidase-like; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_1306
symbol: Slip_1306
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gwc:GWCH70_1766 transposase mutator type; SPTR: C5D271 Transposase mutator type.


ensembl_gene_id: Slip_1307
symbol: Slip_1307
gene_biotype: protein_coding
description:
  COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR011006:IPR001789:IPR000160; KEGG: adg:Adeg_1202 response regulator receiver protein; PFAM: response regulator receiver; GGDEF domain containing protein; SMART: response regulator receiver; SPTR: C9R7N4 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Slip_1309
symbol: Slip_1309
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1370 hypothetical protein; SPTR: Q0AX77 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3160).


ensembl_gene_id: Slip_1310
symbol: Slip_1310
gene_biotype: protein_coding
description:
  Protein of unknown function DUF541; COGs: COG2859 conserved hypothetical protein; InterPro IPR007497:IPR010916:IPR016907; KEGG: csc:Csac_1122 hypothetical protein; PFAM: protein of unknown function DUF541; SPTR: A4XIJ7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541).


ensembl_gene_id: Slip_1311
symbol: Slip_1311
gene_biotype: protein_coding
description:
  Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR009003:IPR001254:IPR001940; KEGG: pth:PTH_0449 trypsin-like serine proteases; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: A5D565 Trypsin-like serine proteases; PFAM: Trypsin.


ensembl_gene_id: Slip_1312
symbol: Slip_1312
gene_biotype: protein_coding
description:
  Diguanylate cyclase and metal dependent phosphohydrolase; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterProIPR000014:IPR000700:IPR000160:IPR013767:IPR 006674; KEGG: chy:CHY_2195 sensory box protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: GGDEF domain containing protein; PAS domain containing protein; SPTR: Q3AA26 Sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; digua [...]


ensembl_gene_id: Slip_1313
symbol: carB
gene_biotype: protein_coding
description:
  COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR016185:IPR005480:IPR011761:IPR005481:IPR 005479:IPR011607:IPR005483:IPR013817:IPR013816:IPR006275; KEGG: drm:Dred_2232 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: A4J6P2 Carbamoyl-phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L [...]


ensembl_gene_id: Slip_1314
symbol: Slip_1314
gene_biotype: protein_coding
description:
  Protein of unknown function DUF195; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: geo:Geob_1385 protein of unknown function DUF195; PFAM: protein of unknown function DUF195; SPTR: B9M4L9 Putative uncharacterized protein; PFAM: RmuC family.


ensembl_gene_id: Slip_1315
symbol: Slip_1315
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: Slip_1317
symbol: Slip_1317
gene_biotype: protein_coding
description:
  InterPro IPR007829; KEGG: cce:Ccel_0591 TM2 domain containing protein; PFAM: TM2 domain containing protein; SPTR: C7IDM3 TM2 domain containing protein; PFAM: TM2 domain.


ensembl_gene_id: Slip_1319
symbol: Slip_1319
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_4; COGs: COG2956 N-acetylglucosaminyl transferase; InterProIPR019734:IPR013026:IPR001440:IPR011717:IPR 011990; KEGG: mno:Mnod_2431 peptidase C14 caspase catalytic subunit P20; PFAM: Tetratricopeptide TPR_4; TPR repeat-containing protein; SPTR: B8ICJ0 Peptidase C14 caspase catalytic subunit p20.


ensembl_gene_id: Slip_1320
symbol: Slip_1320
gene_biotype: protein_coding
description:
  COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: dae:Dtox_2307 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: C8VZZ2 Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C.


ensembl_gene_id: Slip_1321
symbol: Slip_1321
gene_biotype: protein_coding
description:
  COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR019734:IPR000719:IPR013026:IPR 017442:IPR001440:IPR017441:IPR008271:IPR020635:IPR002290:I PR011990; KEGG: cac:CAC0404 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; TPR repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; Tetratricopeptide repeat; SPTR: Q97LZ6 Serine/threonine protein kinase fused to TPR repeats domain; PFAM: Protein kinase domain; Tetratricopeptide repeat; TIGRFAM: pentatricopep [...]


ensembl_gene_id: Slip_1322
symbol: Slip_1322
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: net:Neut_0305 cytochrome c, class I; SPTR: Q0AJ82 Cytochrome c, class I.


ensembl_gene_id: Slip_1323
symbol: Slip_1323
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pmo:Pmob_1542 TPR repeat-containing protein; SPTR: A9BGK3 Tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Slip_1324
symbol: Slip_1324
gene_biotype: protein_coding
description:
  KEGG: bbe:BBR47_12660 hypothetical protein; SPTR: C0Z7K0 Putative uncharacterized protein; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_1325
symbol: Slip_1325
gene_biotype: protein_coding
description:
  COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR015424:IPR005814:IPR015421; KEGG: mta:Moth_1785 aminotransferase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Q2RHK3 Aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Slip_1326
symbol: Slip_1326
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: drt:Dret_1645 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A1HSX9 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_1327
symbol: Slip_1327
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: drt:Dret_1646 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C8X3D3 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Slip_1328
symbol: Slip_1328
gene_biotype: protein_coding
description:
  Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR015168:IPR001638:IPR010067; KEGG: drt:Dret_1647 putative sulfonate/nitrate transport system substrate-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; SPTR: C8X3D4 Putative sulfonate/nitrate transport system substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like; [...]


ensembl_gene_id: Slip_1330
symbol: Slip_1330
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COGs: COG1476 transcriptional regulator protein; InterPro IPR010982:IPR001387; KEGG: dhd:Dhaf_0094 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C6PUU0 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.


ensembl_gene_id: Slip_1331
symbol: Slip_1331
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR008949:IPR000092; KEGG: sth:STH190 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Q67T18 Polyprenyl synthetase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Slip_1332
symbol: Slip_1332
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2600; InterPro IPR019712; KEGG: dau:Daud_1265 hypothetical protein; PFAM: Protein of unknown function DUF2600; SPTR: B1I412 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2600).


ensembl_gene_id: Slip_1333
symbol: Slip_1333
gene_biotype: protein_coding
description:
  COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase; InterPro IPR007269; KEGG: dae:Dtox_2639 S-isoprenylcysteine methyltransferase-like protein; PFAM: Isoprenylcysteine carboxyl methyltransferase; SPTR: C8W131 S-isoprenylcysteine methyltransferase-like protein; PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family.


ensembl_gene_id: Slip_1336
symbol: Slip_1336
gene_biotype: protein_coding
description:
  InterPro IPR012854; KEGG: amt:Amet_3714 copper amine oxidase domain-containing protein; PFAM: copper amine oxidase domain protein; SPTR: A6TUG6 Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain; Predicted periplasmic protein (DUF2233).


ensembl_gene_id: Slip_1338
symbol: Slip_1338
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR010982:IPR001387; KEGG: csc:Csac_2454 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A4XM96 Helix-turn-helix domain protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Slip_1341
symbol: Slip_1341
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: Slip_1343
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Slip_1344
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Slip_1345
symbol: Slip_1345
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: Slip_1346
symbol: Slip_1346
gene_biotype: protein_coding
description:
  CRISPR-associated helicase Cas3; COGs: COG1203 helicase; InterProIPR014021:IPR001650:IPR011545:IPR014001:IPR 006483:IPR006474; KEGG: tro:trd_0020 CRISPR-associated helicase Cas3 domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: B9L1B9 CRISPR-associated helicase Cas3 domain protein; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3.


ensembl_gene_id: Slip_1347
symbol: Slip_1347
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas5 family; COGs: COG1688 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013337:IPR013422; KEGG: tro:trd_0019 CRISPR-associated protein Cas5, Tneap subtype; SPTR: B9L1B8 CRISPR-associated protein Cas5, Tneap subtype; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5, Tneap subtype; CRISPR-associated protein Cas5, N-terminal domain.


ensembl_gene_id: Slip_1348
symbol: Slip_1348
gene_biotype: protein_coding
description:
  CRISPR-associated regulatory protein, DevR family; COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154:IPR013414; KEGG: tro:trd_0018 CRISPR-associated regulatory protein, DevR family; SPTR: B9L1B7 CRISPR-associated regulatory protein, DevR family; TIGRFAM: CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family; manually curated; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family.


ensembl_gene_id: Slip_1349
symbol: Slip_1349
gene_biotype: protein_coding
description:
  CRISPR-associated CXXC_CXXC protein Cst1; InterPro IPR019121:IPR010180; KEGG: tro:trd_0017 hypothetical protein; PFAM: CRISPR-associated protein, CXXC-CXXC region; SPTR: B9L1B6 Putative uncharacterized protein; TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1.


ensembl_gene_id: Slip_1352
symbol: Slip_1352
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP protein, Cmr6 family; COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR010172; KEGG: mvn:Mevan_0110 CRISPR-associated RAMP Cmr6 family protein; PFAM: protein of unknown function DUF324; SPTR: A8TD08 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family.


ensembl_gene_id: Slip_1353
symbol: Slip_1353
gene_biotype: protein_coding
description:
  KEGG: mvn:Mevan_0109 CRISPR-associated Cmr5 family protein; SPTR: A6UNF0 CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein (Cas_Cmr5).


ensembl_gene_id: Slip_1354
symbol: Slip_1354
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP protein, Cmr4 family; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013410; KEGG: cbh:CLC_2115 CRISPR-associated RAMP Cmr4 family protein family protein; PFAM: protein of unknown function DUF324; SPTR: A7FVL3 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family.


ensembl_gene_id: Slip_1355
symbol: Slip_1355
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cbh:CLC_2116 CRISPR-associated Cmr3 family protein; SPTR: A7FVL4 CRISPR-associated protein, Cmr3 family; PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR-associated protein, Cmr3 family.


ensembl_gene_id: Slip_1356
symbol: Slip_1356
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR000160; KEGG: mvn:Mevan_0106 CRISPR-associated RAMP Crm2 family protein; SPTR: A6UNE7 CRISPR-associated protein, Crm2 family; PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Crm2 family.


ensembl_gene_id: Slip_1358
symbol: Slip_1358
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ecp:ECP_1410 putative autotransporter/adhesin; SPTR: Q0TI10 Putative autotransporter/adhesin.


ensembl_gene_id: Slip_1361
symbol: Slip_1361
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG0517 FOG: CBS domain; InterPro IPR000160:IPR000644:IPR013785; KEGG: drm:Dred_1016 diguanylate cyclase; PFAM: CBS domain containing protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; CBS domain containing protein; SPTR: A4J398 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Slip_1362
symbol: Slip_1362
gene_biotype: protein_coding
description:
  SNARE associated Golgi protein-related protein; COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: swo:Swol_2545 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: Q0ATX1 Putative uncharacterized protein; PFAM: SNARE associated Golgi protein.


ensembl_gene_id: Slip_1363
symbol: Slip_1363
gene_biotype: protein_coding
description:
  Putative hydrolase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: swo:Swol_0929 putative hydrolase; SPTR: Q0AYF9 Putative hydrolase; PFAM: Prolyl oligopeptidase family.


ensembl_gene_id: Slip_1364
symbol: Slip_1364
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0928 hypothetical protein; SPTR: Q0AYG0 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2197).


ensembl_gene_id: Slip_1365
symbol: Slip_1365
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004090; KEGG: swo:Swol_0927 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Q0AYG1 Putative methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_1368
symbol: Slip_1368
gene_biotype: protein_coding
description:
  KEGG: nth:Nther_2614 heat shock protein DnaJ domain protein; SPTR: B2A1X3 Heat shock protein DnaJ domain protein; PFAM: B-box zinc finger.


ensembl_gene_id: Slip_1370
symbol: Slip_1370
gene_biotype: protein_coding
description:
  Peptidase S16 lon domain protein; COGs: COG1067 ATP-dependent protease; InterPro IPR020568:IPR008269:IPR001984; KEGG: swo:Swol_0925 ATP-dependent protease; PFAM: peptidase S16 lon domain protein; SPTR: Q0AYG3 ATP-dependent protease; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease.


ensembl_gene_id: Slip_1371
symbol: Slip_1371
gene_biotype: protein_coding
description:
  Beta-lactamase-like protein; COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: swo:Swol_0924 beta-lactamase-like protein; SPTR: Q0AYG4 Beta-lactamase-like protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_1372
symbol: Slip_1372
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR001264:IPR001460:IPR011816; KEGG: swo:Swol_0921 penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: Q0AYG7 Penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; penicillin-binding protein, 1A family.


ensembl_gene_id: Slip_1373
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Slip_1374
symbol: Slip_1374
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase/NADH oxidase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterProIPR001155:IPR013027:IPR000103:IPR013785:IPR 016040; KEGG: swo:Swol_1479 NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q0AWX0 NADH:flavin oxidoreductase, Old Yellow enzyme family; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.


ensembl_gene_id: Slip_1375
symbol: Slip_1375
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gbe:GbCGDNIH1_1438 transglycosylase SLT family protein; SPTR: Q26H08 Outer membrane protein.


ensembl_gene_id: Slip_1376
symbol: Slip_1376
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR011044:IPR011042; KEGG: scl:sce3357 hypothetical protein; SPTR: A9GN20 Putative uncharacterized protein.


ensembl_gene_id: Slip_1378
symbol: Slip_1378
gene_biotype: protein_coding
description:
  Coat F domain protein; InterPro IPR012851; KEGG: swo:Swol_1896 hypothetical protein; PFAM: Coat F domain protein; SPTR: Q0AVR0 Putative uncharacterized protein; PFAM: Coat F domain.


ensembl_gene_id: Slip_1379
symbol: Slip_1379
gene_biotype: protein_coding
description:
  Sporulation protein YyaC; InterPro IPR009665; KEGG: swo:Swol_1197 hypothetical protein; PFAM: protein of unknown function DUF1256; SPTR: Q0AXP8 Putative uncharacterized protein; TIGRFAM: sporulation protein YyaC; PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC.


ensembl_gene_id: Slip_1380
symbol: hisC
gene_biotype: protein_coding
description:
  COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR015424:IPR004839:IPR001176:IPR015421:IPR 015422:IPR005861; KEGG: swo:Swol_1198 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Q0AXP7 Histidinol phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Slip_1381
symbol: Slip_1381
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR002869:IPR019752; KEGG: swo:Swol_1195 indolepyruvate oxidoreductase subunit beta; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: Q0AXQ0 Indolepyruvate oxidoreductase subunit beta 2; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.


ensembl_gene_id: Slip_1382
symbol: Slip_1382
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: Slip_1383
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: Slip_1384
symbol: Slip_1384
gene_biotype: protein_coding
description:
  Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR008978:IPR002068; KEGG: pth:PTH_1328 molecular chaperone; PFAM: heat shock protein Hsp20; SPTR: A5D2M5 Molecular chaperone; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Slip_1385
symbol: Slip_1385
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pme:NATL1_00231 putative thiamine-monophosphate kinase; SPTR: Q8NSJ7 ABC-type cobalamin/Fe3+-siderophores transport system, secreted component.


ensembl_gene_id: Slip_1386
symbol: Slip_1386
gene_biotype: protein_coding
description:
  DnaB domain protein helicase domain protein; COGs: COG0305 Replicative DNA helicase; InterPro IPR007693:IPR007694:IPR016136; KEGG: swo:Swol_1201 replicative DNA helicase-like protein; PFAM: DnaB domain protein helicase domain protein; SPTR: Q0AXP4 Primary replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain.


ensembl_gene_id: Slip_1387
symbol: Slip_1387
gene_biotype: protein_coding
description:
  Primosome, DnaD subunit; InterPro IPR006343; KEGG: swo:Swol_1202 hypothetical protein; SPTR: Q0AXP3 Putative uncharacterized protein; TIGRFAM: primosome, DnaD subunit; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.


ensembl_gene_id: Slip_1388
symbol: Slip_1388
gene_biotype: protein_coding
description:
  RNA-metabolising metallo-beta-lactamase; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: swo:Swol_0305 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Q0B056 RNA-metabolising metallo-beta-lactamase; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.


ensembl_gene_id: Slip_1390
symbol: Slip_1390
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR015424:IPR004839:IPR004838:IPR015421; KEGG: swo:Swol_1205 putative aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Q0AXP0 Aminotransferase; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Slip_1391
symbol: Slip_1391
gene_biotype: protein_coding
description:
  Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterProIPR011008:IPR000485:IPR019887:IPR019888:IPR 011991; KEGG: swo:Swol_1206 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: Q0AXN9 Transcriptional regulator, AsnC family; PFAM: AsnC family.


ensembl_gene_id: Slip_1392
symbol: Slip_1392
gene_biotype: protein_coding
description:
  Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953:IPR000103:IPR013027; KEGG: dat:HRM2_30780 putative fusion protein, heterodisulfide reductase (HdrA) / ferredoxin (iron-sulfur-binding protein); PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C0QKS1 Putative fusion protein, heterodisulfide reductase (HdrA) / ferredoxin (Iron-sulfur-binding protein); PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Slip_1393
symbol: Slip_1393
gene_biotype: protein_coding
description:
  COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: chy:CHY_1233 methylenetetrahydrofolate reductase family protein; PFAM: methylenetetrahydrofolate reductase; SPTR: Q3ACR3 Methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Slip_1394
symbol: Slip_1394
gene_biotype: protein_coding
description:
  KEGG: chy:CHY_1232 hypothetical protein; SPTR: Q3ACR4 Putative uncharacterized protein; PFAM: Methylene-tetrahydrofolate reductase C terminal.


ensembl_gene_id: Slip_1395
symbol: Slip_1395
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; InterPro IPR017896:IPR001450:IPR017900; KEGG: dal:Dalk_2777 methyl-viologen-reducing hydrogenase delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FKU7 Methyl-viologen-reducing hydrogenase delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.


ensembl_gene_id: Slip_1396
symbol: Slip_1396
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterProIPR012338:IPR015956:IPR001967:IPR012907:IPR 018044; KEGG: chy:CHY_2101 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: Q3AAB4 D-alanyl-D-alanine carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; Belongs to the peptidase S11 family.


ensembl_gene_id: Slip_1397
symbol: Slip_1397
gene_biotype: protein_coding
description:
  Appr-1-p processing domain protein; COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: rca:Rcas_0425 appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: A7NGG9 Appr-1-p processing domain protein; PFAM: Macro domain.


ensembl_gene_id: Slip_1398
symbol: Slip_1398
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR000086:IPR020084:IPR020476; KEGG: ddr:Deide_02330 putative NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: C8S6W7 NUDIX hydrolase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Slip_1399
symbol: Slip_1399
gene_biotype: protein_coding
description:
  ABC-1 domain protein; COGs: COG0661 unusual protein kinase; InterPro IPR011009:IPR004147; KEGG: swo:Swol_1207 ABC transporter; PFAM: ABC-1 domain protein; SPTR: Q0AXN8 2-octaprenylphenol hydroxylase; PFAM: ABC1 family.


ensembl_gene_id: Slip_1401
symbol: Slip_1401
gene_biotype: protein_coding
description:
  degV family protein; COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: cbk:CLL_A2895 DegV family protein; PFAM: DegV family protein; SPTR: B2TPC5 DegV family protein; TIGRFAM: degV family protein; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family.


ensembl_gene_id: Slip_1403
symbol: Slip_1403
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1313 Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating protein; InterPro IPR007197:IPR016431; KEGG: chy:CHY_0097 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Q3AFW5 Radical SAM domain protein; manually curated; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_1404
symbol: Slip_1404
gene_biotype: protein_coding
description:
  Protein of unknown function DUF433; COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: adg:Adeg_0280 protein of unknown function DUF433; PFAM: protein of unknown function DUF433; SPTR: C9RB17 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF433).


ensembl_gene_id: Slip_1406
symbol: Slip_1406
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: acetyl-CoA synthetase, putative; SPTR: B9TC46 Acetyl-CoA synthetase, putative.


ensembl_gene_id: Slip_1407
symbol: Slip_1407
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0132; COGs: COG4818 membrane protein; InterPro IPR005348; KEGG: deb:DehaBAV1_0694 hypothetical protein; PFAM: protein of unknown function UPF0132; SPTR: Q3ZXE8 Conserved membrane protein; PFAM: Chloroplast import component protein (Tic20).


ensembl_gene_id: Slip_1408
symbol: Slip_1408
gene_biotype: protein_coding
description:
  COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR005158:IPR019734:IPR011990; KEGG: rhi:NGR_c19360 adenylate cyclase; PFAM: transcriptional activator domain; SPTR: C0GFP5 Transcriptional activator domain protein; PFAM: Bacterial transcriptional activator domain.


ensembl_gene_id: Slip_1410
symbol: Slip_1410
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR007627:IPR013249:IPR 000838:IPR014284; KEGG: swo:Swol_1212 ECF subfamily RNA polymerase sigma-24 factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Q0AXN3 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Slip_1412
symbol: Slip_1412
gene_biotype: protein_coding
description:
  Protein of unknown function DUF541; COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: rle:RL3382 hypothetical protein; PFAM: protein of unknown function DUF541; SPTR: Q1MDV7 Putative outer membrane protein related to bp26 antigen of Brucella; PFAM: Protein of unknown function (DUF541).


ensembl_gene_id: Slip_1413
symbol: Slip_1413
gene_biotype: protein_coding
description:
  3D domain protein; COGs: COG3584 conserved hypothetical protein; InterPro IPR002477:IPR010611; KEGG: swo:Swol_0756 hypothetical protein; PFAM: 3D domain protein; Peptidoglycan-binding domain 1 protein; SPTR: Q0AYX6 Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain; 3D domain.


ensembl_gene_id: Slip_1414
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: Slip_1415
symbol: Slip_1415
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR006176:IPR006108:IPR 006180:IPR013328; KEGG: swo:Swol_1935 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: Q0AVM2 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Slip_1416
symbol: Slip_1416
gene_biotype: protein_coding
description:
  Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR009051:IPR017896:IPR001450:IPR004017:IPR 017900:IPR012285; KEGG: swo:Swol_0698 putative iron-sulfur-binding reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AZ32 Putative iron-sulfur-binding reductase; PFAM: Cysteine-rich domain; Nitrate reductase gamma subunit.


ensembl_gene_id: Slip_1417
symbol: Slip_1417
gene_biotype: protein_coding
description:
  COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731:IPR001308:IPR014729; KEGG: swo:Swol_0697 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; SPTR: Q0AZ33 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: Slip_1418
symbol: Slip_1418
gene_biotype: protein_coding
description:
  COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730:IPR012255:IPR014729; KEGG: swo:Swol_0696 electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Q0AZ34 Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.


ensembl_gene_id: Slip_1419
symbol: Slip_1419
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: swo:Swol_0695 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: Q0AZ35 MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.


ensembl_gene_id: Slip_1420
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR015424:IPR005814:IPR015421:IPR004639; KEGG: swo:Swol_0694 glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: Q0AZ36 Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.


ensembl_gene_id: Slip_1421
symbol: Slip_1421
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; KEGG: nth:Nther_1130 putative transcriptional regulator, AsnC family; SPTR: B2A1H3 Putative transcriptional regulator, AsnC family.


ensembl_gene_id: Slip_1422
symbol: Slip_1422
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR000485:IPR019885:IPR019888:IPR011991; KEGG: mta:Moth_2198 AsnC family transcriptional regulator; SMART: Transcription regulator, AsnC-type; SPTR: Q2RGF2 Transcriptional regulator, AsnC family.


ensembl_gene_id: Slip_1423
symbol: Slip_1423
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR017200:IPR006638; KEGG: swo:Swol_0691 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AZ39 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_1424
symbol: Slip_1424
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731:IPR013785; KEGG: swo:Swol_0690 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: Q0AZ40 Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.


ensembl_gene_id: Slip_1425
symbol: Slip_1425
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR017200; KEGG: swo:Swol_0688 metallo cofactor biosynthesis protein; PFAM: Radical SAM domain protein; SPTR: Q0AZ41 Metallo cofactor biosynthesis protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_1426
symbol: Slip_1426
gene_biotype: protein_coding
description:
  uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterProIPR000878:IPR003754:IPR003043:IPR014777:IPR 014776:IPR006366; KEGG: swo:Swol_0687 hypothetical protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Q0AZ42 Uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.


ensembl_gene_id: Slip_1427
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Slip_1428
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Slip_1429
symbol: Slip_1429
gene_biotype: protein_coding
description:
  COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR016040:IPR006367; KEGG: swo:Swol_0683 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; SPTR: Q0AZ44 Precorrin-2 dehydrogenase; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain.


ensembl_gene_id: Slip_1430
symbol: tatA-2
gene_biotype: protein_coding
description:
  Sec-independent translocation protein mttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Slip_1431
symbol: Slip_1431
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: Slip_1432
symbol: Slip_1432
gene_biotype: protein_coding
description:
  COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR016174; KEGG: swo:Swol_0797 formate dehydrogenase gamma subunit; SPTR: Q0AYT6 Formate dehydrogenase gamma subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit.


ensembl_gene_id: Slip_1433
symbol: Slip_1433
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896:IPR001450:IPR017900:IPR014603; KEGG: swo:Swol_0798 formate dehydrogenase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AYT5 Formate dehydrogenase beta subunit; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing.


ensembl_gene_id: Slip_1434
symbol: Slip_1434
gene_biotype: protein_coding
description:
  Formate dehydrogenase, alpha subunit; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; Contains selenocysteine; InterProIPR009010:IPR017909:IPR006963:IPR006656:IPR 006657:IPR006655:IPR006443:IPR006311; KEGG: swo:Swol_0799 formate dehydrogenase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; PRIAM: Nitrate reductase; SPTR: Q0AYT4 Formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; manually curated; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; M [...]


ensembl_gene_id: Slip_1435
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: Slip_1436
symbol: Slip_1436
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR008949:IPR000092; KEGG: swo:Swol_0680 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: Q0AZ47 Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; TIGRFAM: heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Slip_1437
symbol: Slip_1437
gene_biotype: protein_coding
description:
  Lysine 2,3-aminomutase YodO family protein; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197:IPR003739; KEGG: adg:Adeg_1408 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; PRIAM: Lysine 2,3-aminomutase; SPTR: C9R880 Lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Lysine-2,3-aminomutase; TIGRFAM: KamA family protein.


ensembl_gene_id: Slip_1438
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Slip_1439
symbol: Slip_1439
gene_biotype: protein_coding
description:
  COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: swo:Swol_0678 4-hydroxybenzoate polyprenyltransferase, putative; PFAM: UbiA prenyltransferase; SPTR: Q0AZ49 4-hydroxybenzoate polyprenyltransferase, putative; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: Slip_1440
symbol: Slip_1440
gene_biotype: protein_coding
description:
  UbiD family decarboxylase; COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: swo:Swol_0677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Carboxylyase-related protein; SPTR: Q0AZ50 3-octaprenyl-4hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; Belongs to the UbiD family.


ensembl_gene_id: Slip_1441
symbol: Slip_1441
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR008949; KEGG: swo:Swol_0676 hypothetical protein; SPTR: Q0AZ51 Putative uncharacterized protein.


ensembl_gene_id: Slip_1442
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: Slip_1443
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: Slip_1444
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Slip_1445
symbol: Slip_1445
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Slip_1447
symbol: Slip_1447
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Slip_1448
symbol: Slip_1448
gene_biotype: protein_coding
description:
  COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterProIPR016035:IPR016036:IPR014043:IPR001227:IPR 004410; KEGG: swo:Swol_1851 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; SPTR: Q0AVV5 [Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.


ensembl_gene_id: Slip_1449
symbol: Slip_1449
gene_biotype: protein_coding
description:
  Enoyl-(acyl-carrier-protein) reductase II; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR013785:IPR017569; KEGG: swo:Swol_1852 2-nitropropane dioxygenase-like protein; PFAM: 2-nitropropane dioxygenase NPD; SPTR: Q0AVV4 2-nitropropane dioxygenase-like protein; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II.


ensembl_gene_id: Slip_1450
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Slip_1451
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: Slip_1452
symbol: Slip_1452
gene_biotype: protein_coding
description:
  InterPro IPR017850; KEGG: drm:Dred_2201 hypothetical protein; SPTR: A4J6L3 Putative uncharacterized protein.


ensembl_gene_id: Slip_1453
symbol: Slip_1453
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078:IPR001345; KEGG: pth:PTH_1315 fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase; SPTR: A5D2P8 Fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase.


ensembl_gene_id: Slip_1455
symbol: Slip_1455
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: vpr:Vpar_0632 ferrous iron transport protein B; SPTR: D1BLQ8 Ferrous iron transport protein B.


ensembl_gene_id: Slip_1456
symbol: Slip_1456
gene_biotype: protein_coding
description:
  KEGG: bbt:BBta_4657 arginyl-tRNA-protein transferase; SPTR: A0JHK3 Putative Ni,Fe-hydrogenase large subunit (Fragment).


ensembl_gene_id: Slip_1457
symbol: Slip_1457
gene_biotype: protein_coding
description:
  eIF-2B alpha/beta/delta-related uncharacterized protein; COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR000649:IPR011559; KEGG: drm:Dred_1773 eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: A4J5E5 Translation initiation factor 2B subunit I family (IF-2BI); TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-met [...]


ensembl_gene_id: Slip_1458
symbol: Slip_1458
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR020322:IPR017871:IPR003593; KEGG: mpd:MCP_1094 putative iron compound ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8D028 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_1459
symbol: Slip_1459
gene_biotype: protein_coding
description:
  COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: dau:Daud_1316 transport system permease protein; PFAM: transport system permease protein; SPTR: C0GK81 Transport system permease protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Slip_1460
symbol: Slip_1460
gene_biotype: protein_coding
description:
  Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: dau:Daud_1317 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: B1I4F1 Periplasmic binding protein; PFAM: Periplasmic binding protein.


ensembl_gene_id: Slip_1461
symbol: Slip_1461
gene_biotype: protein_coding
description:
  COGs: COG5423 metal-binding protein; InterPro IPR019271; KEGG: pth:PTH_2051 hypothetical protein; PFAM: Protein of unknown function DUF2284, metal-binding; SPTR: A5D0J2 Putative uncharacterized protein; PFAM: Predicted metal-binding protein (DUF2284).


ensembl_gene_id: Slip_1462
symbol: Slip_1462
gene_biotype: protein_coding
description:
  C_GCAxxG_C_C family protein; InterPro IPR010181; KEGG: pth:PTH_2052 hypothetical protein; PFAM: C_GCAxxG_C_C family protein; SPTR: A5D0J3 Putative uncharacterized protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein.


ensembl_gene_id: Slip_1463
symbol: Slip_1463
gene_biotype: protein_coding
description:
  COGs: COG2109 ATP:corrinoid adenosyltransferase; InterPro IPR003724; KEGG: drm:Dred_1767 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: A4J5D9 Cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase.


ensembl_gene_id: Slip_1464
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: Slip_1465
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: Slip_1466
symbol: Slip_1466
gene_biotype: protein_coding
description:
  KEGG: SORBIDRAFT_01g000550; hypothetical protein; SPTR: C5WRX4 Putative uncharacterized protein Sb01g000550.


ensembl_gene_id: Slip_1467
symbol: Slip_1467
gene_biotype: protein_coding
description:
  COGs: COG0527 Aspartokinase; InterProIPR001048:IPR002912:IPR018042:IPR005260:IPR 001341; KEGG: swo:Swol_1317 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: Q0AXC9 Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Belongs to the aspartokinase family.


ensembl_gene_id: Slip_1468
symbol: Slip_1468
gene_biotype: protein_coding
description:
  COGs: COG0460 Homoserine dehydrogenase; InterProIPR016040:IPR005106:IPR001342:IPR002912:IPR 019811:IPR016204; KEGG: swo:Swol_1319 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; SPTR: Q0AXC7 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain.


ensembl_gene_id: Slip_1470
symbol: Slip_1470
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: Slip_1471
symbol: gpsA
gene_biotype: protein_coding
description:
  NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterProIPR008927:IPR016040:IPR011128:IPR006109:IPR 002345:IPR006168:IPR013328; KEGG: swo:Swol_1323 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Q0AXC3 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Slip_1472
symbol: plsY
gene_biotype: protein_coding
description:
  Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Slip_1473
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Slip_1474
symbol: Slip_1474
gene_biotype: protein_coding
description:
  Protein of unknown function DUF512; COGs: COG1625 Fe-S oxidoreductase related to NifB/MoaA family; InterPro IPR001478:IPR007549; KEGG: swo:Swol_1326 Fe-S oxidoreductase; PFAM: protein of unknown function DUF512; SPTR: Q0AXC0 Fe-S oxidoreductase; PFAM: PDZ domain (Also known as DHR or GLGF); Protein of unknown function (DUF512); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase.


ensembl_gene_id: Slip_1475
symbol: Slip_1475
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1336 hypothetical protein; SPTR: Q0AXB0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3189).


ensembl_gene_id: Slip_1476
symbol: Slip_1476
gene_biotype: protein_coding
description:
  InterPro IPR010897; KEGG: swo:Swol_1339 putative stage II sporulation protein P; PFAM: Stage II sporulation P family protein; SPTR: Q0AXA7 Putative stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.


ensembl_gene_id: Slip_1477
symbol: Slip_1477
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1614; InterPro IPR011672; KEGG: swo:Swol_1340 hypothetical protein; PFAM: protein of unknown function DUF1614; SPTR: Q0AXA6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1614).


ensembl_gene_id: Slip_1479
symbol: Slip_1479
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); KEGG: dae:Dtox_2072 beta-lactamase domain protein; SPTR: C8VYZ1 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_1480
symbol: Slip_1480
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_1255 hypothetical protein; SPTR: Q2RJ20 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3006).


ensembl_gene_id: Slip_1481
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: Slip_1482
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: Slip_1483
symbol: Slip_1483
gene_biotype: protein_coding
description:
  InterPro IPR013429; KEGG: dau:Daud_0920 FmdB family regulatory protein; PFAM: Putative regulatory protein FmdB; SPTR: B1I357 Putative regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.


ensembl_gene_id: Slip_1484
symbol: ispH
gene_biotype: protein_coding
description:
  Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: Slip_1485
symbol: Slip_1485
gene_biotype: protein_coding
description:
  COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123:IPR004552; KEGG: swo:Swol_1345 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Q0AXA1 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: Slip_1486
symbol: cmk
gene_biotype: protein_coding
description:
  COGs: COG0283 Cytidylate kinase; InterPro IPR000489:IPR000623:IPR011994:IPR003136; KEGG: swo:Swol_1346 cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase; SPTR: Q0AXA0 Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase.


ensembl_gene_id: Slip_1488
symbol: Slip_1488
gene_biotype: protein_coding
description:
  Accessory gene regulator B; COGs: COG4512 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide; InterPro IPR006741; KEGG: swo:Swol_1290 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; SPTR: Q0AXF5 Accessory gene regulator B; PFAM: Accessory gene regulator B.


ensembl_gene_id: Slip_1489
symbol: Slip_1489
gene_biotype: protein_coding
description:
  COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR003594:IPR005467; KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C8W4Q4 Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Slip_1490
symbol: pheT
gene_biotype: protein_coding
description:
  COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR020825:IPR005121:IPR009061:IPR005146:IPR 005147:IPR004532; KEGG: swo:Swol_1095 phenylalanine--tRNA ligase; PFAM: B3/4 domain protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Q0AXZ9 Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial.


ensembl_gene_id: Slip_1491
symbol: pheS
gene_biotype: protein_coding
description:
  COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterProIPR010978:IPR006195:IPR004188:IPR002319:IPR 004529; KEGG: mta:Moth_1751 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; SPTR: Q2RHN7 Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthe [...]


ensembl_gene_id: Slip_1492
symbol: Slip_1492
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase (SpoU); COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: swo:Swol_1093 23S rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: Q0AY01 23S rRNA methyltransferase; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: Slip_1493
symbol: Slip_1493
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037; KEGG: nth:Nther_0104 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: B2A3S7 TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain.


ensembl_gene_id: Slip_1494
symbol: Slip_1494
gene_biotype: protein_coding
description:
  Potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445:IPR004772; KEGG: hor:Hore_11710 potassium uptake protein, TrkH family; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: A1HP81 Potassium uptake protein, TrkH family; TIGRFAM: potassium uptake protein, TrkH family; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family.


ensembl_gene_id: Slip_1495
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Slip_1496
symbol: rpmI
gene_biotype: protein_coding
description:
  Ribosomal protein L35; InterPro IPR001706:IPR018265; KEGG: swo:Swol_1091 50S ribosomal protein L35; PFAM: ribosomal protein L35; SPTR: Q0AY03 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Slip_1497
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Slip_1498
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: Slip_1499
symbol: Slip_1499
gene_biotype: protein_coding
description:
  Band 7 protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR018080:IPR001972; KEGG: swo:Swol_1863 stomatin like protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Q0AVU3 SPFH domain, Band 7 family protein; PFAM: SPFH domain / Band 7 family.


ensembl_gene_id: Slip_1500
symbol: Slip_1500
gene_biotype: protein_coding
description:
  Protein of unknown function DUF107; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: swo:Swol_1862 hypothetical protein; PFAM: protein of unknown function DUF107; SPTR: Q0AVU4 Putative uncharacterized protein; PFAM: NfeD-like.


ensembl_gene_id: Slip_1501
symbol: Slip_1501
gene_biotype: protein_coding
description:
  Sporulation protein YtxC; InterPro IPR014199; KEGG: swo:Swol_1087 hypothetical protein; PFAM: Sporulation protein YtxC; SPTR: Q0AY07 Putative uncharacterized protein; PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC.


ensembl_gene_id: Slip_1502
symbol: Slip_1502
gene_biotype: protein_coding
description:
  COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: dae:Dtox_2404 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: C8W0G0 Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase.


ensembl_gene_id: Slip_1503
symbol: Slip_1503
gene_biotype: protein_coding
description:
  ABC-2 type transporter; InterPro IPR000412:IPR013525:IPR013526; KEGG: cpc:Cpar_1860 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: C6P9G0 ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein.


ensembl_gene_id: Slip_1504
symbol: Slip_1504
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ttr:Tter_2251 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6P9F9 ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Slip_1505
symbol: Slip_1505
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: mta:Moth_0998 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Q2RJS6 Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Slip_1506
symbol: Slip_1506
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR007267:IPR001173:IPR013838; KEGG: swo:Swol_1908 cell wall biosynthesis glycosyltransferase-like protein; PFAM: glycosyl transferase family 2; GtrA family protein; SPTR: Q0AVP9 Glycosyltransferases involved in cell wall biogenesis-like protein; PFAM: GtrA-like protein; Glycosyl transferase family 2.


ensembl_gene_id: Slip_1508
symbol: ku
gene_biotype: protein_coding
description:
  Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: Slip_1509
symbol: Slip_1509
gene_biotype: protein_coding
description:
  COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR016027:IPR012310:IPR016059; KEGG: swo:Swol_1123 DNA ligase, putative; PFAM: ATP dependent DNA ligase; SPTR: C0GF58 DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain.


ensembl_gene_id: Slip_1510
symbol: Slip_1510
gene_biotype: protein_coding
description:
  DNA polymerase LigD, polymerase domain protein; COGs: COG3285 eukaryotic-type DNA primase; InterPro IPR002755:IPR014145; KEGG: mta:Moth_2082 hypothetical protein; PFAM: DNA primase small subunit; SPTR: Q2RGR4 Putative uncharacterized protein; TIGRFAM: DNA polymerase LigD, polymerase domain protein; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain.


ensembl_gene_id: Slip_1511
symbol: Slip_1511
gene_biotype: protein_coding
description:
  InterPro IPR019076:IPR014247; KEGG: adg:Adeg_0867 sporulation lipoprotein, YhcN/YlaJ family; PFAM: Sporulation lipoprotein YhcN/YlaJ-like; SPTR: C9RCM9 Sporulation lipoprotein, YhcN/YlaJ family; TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family.


ensembl_gene_id: Slip_1512
symbol: Slip_1512
gene_biotype: protein_coding
description:
  COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: lsp:Bsph_4463 hypothetical protein; PFAM: polysaccharide deacetylase; SPTR: B1HZQ5 Hypothetical yjeA protein; PFAM: Polysaccharide deacetylase.


ensembl_gene_id: Slip_1513
symbol: Slip_1513
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase family sporulation protein PdaB; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509:IPR014132; KEGG: swo:Swol_1068 xylanase/chitin deacetylase-like protein; PFAM: polysaccharide deacetylase; SPTR: Q0AY26 Xylanase/chitin deacetylase-like protein; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB.


ensembl_gene_id: Slip_1517
symbol: Slip_1517
gene_biotype: protein_coding
description:
  Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550:IPR005170; KEGG: dhd:Dhaf_3277 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; SPTR: Q24VP6 Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain.


ensembl_gene_id: Slip_1519
symbol: Slip_1519
gene_biotype: protein_coding
description:
  KEGG: pma:Pro0986 hypothetical protein; SPTR: A3UI92 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0016.


ensembl_gene_id: Slip_1520
symbol: Slip_1520
gene_biotype: protein_coding
description:
  InterPro IPR001727; KEGG: nth:Nther_0051 protein of unknown function UPF0016; PFAM: protein of unknown function UPF0016; SPTR: B2A3M4 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0016.


ensembl_gene_id: Slip_1521
symbol: Slip_1521
gene_biotype: protein_coding
description:
  COGs: COG3409 Putative peptidoglycan-binding domain-containing protein; InterPro IPR002477; KEGG: swo:Swol_1518 hypothetical protein; PFAM: Peptidoglycan-binding domain 1 protein; SPTR: Q0AWT3 Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain.


ensembl_gene_id: Slip_1522
symbol: Slip_1522
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0047; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: tte:TTE2189 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: Q8R842 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149.


ensembl_gene_id: Slip_1523
symbol: Slip_1523
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG3359 exonuclease; InterPro IPR012337:IPR013026:IPR011990; KEGG: sth:STH1622 hypothetical protein; SPTR: Q67NY6 Putative uncharacterized protein.


ensembl_gene_id: Slip_1524
symbol: Slip_1524
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterProIPR014021:IPR001650:IPR011545:IPR018973:IPR 014001; KEGG: hor:Hore_14630 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; Protein of unknown function DUF1998; SMART: DEAD-like helicase; helicase domain protein; SPTR: B8CY43 DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase.


ensembl_gene_id: Slip_1525
symbol: Slip_1525
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; KEGG: si:ch211-135f11.1; K12490 Arf-GAP, Rho-GAP domain, ANK repeat and PH domain-containing protein; SPTR: Q4HGT5 Glycosyl transferase, putative.


ensembl_gene_id: Slip_1526
symbol: Slip_1526
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: abcG18; ABC transporter G family protein; SPTR: Q8ST66 ABC transporter G family member 18.


ensembl_gene_id: Slip_1527
symbol: Slip_1527
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: rfr:Rfer_1942 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q21X35 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_1528
symbol: Slip_1528
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dau:Daud_1146 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: B1I442 Putative uncharacterized protein; PFAM: Predicted permease.


ensembl_gene_id: Slip_1529
symbol: Slip_1529
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: dhd:Dhaf_1550 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: B8FP75 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Slip_1530
symbol: Slip_1530
gene_biotype: protein_coding
description:
  ATPase associated with various cellular activities AAA_5; COGs: COG0714 MoxR-like ATPase; InterPro IPR011704:IPR003593; KEGG: mta:Moth_0825 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: Q2RK97 ATPase associated with various cellular activities, AAA_5; PFAM: AAA domain (dynein-related subfamily).


ensembl_gene_id: Slip_1531
symbol: Slip_1531
gene_biotype: protein_coding
description:
  COGs: COG3552 Protein containing von Willebrand factor type A (vWA) domain; InterPro IPR008912; KEGG: pth:PTH_0548 hypothetical protein; PFAM: VWA containing CoxE family protein; SPTR: A5D4U2 Putative uncharacterized protein CoxE; PFAM: VWA domain containing CoxE-like protein.


ensembl_gene_id: Slip_1532
symbol: Slip_1532
gene_biotype: protein_coding
description:
  Formate dehydrogenase, putative; COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR016174; KEGG: swo:Swol_1927 formate dehydrogenase, putative; SPTR: Q0AVN0 Formate dehydrogenase gamma subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit.


ensembl_gene_id: Slip_1533
symbol: Slip_1533
gene_biotype: protein_coding
description:
  Iron hydrogenase small subunit; InterPro IPR008953:IPR003149:IPR006311; KEGG: swo:Swol_1926 hypothetical protein; PFAM: iron hydrogenase small subunit; SPTR: Q0AVN1 Putative uncharacterized protein; PFAM: Iron hydrogenase small subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.


ensembl_gene_id: Slip_1534
symbol: Slip_1534
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR009016:IPR017896:IPR001450:IPR004108:IPR 017900:IPR013352; KEGG: swo:Swol_1925 ferredoxin hydrogenase; PFAM: hydrogenase large subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: Ferredoxin hydrogenase; SPTR: Q0AVN2 Ferredoxin hydrogenase; TIGRFAM: hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; TIGRFAM: hydrogenases, Fe-only.


ensembl_gene_id: Slip_1536
symbol: Slip_1536
gene_biotype: protein_coding
description:
  Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR004039:IPR001226; KEGG: swo:Swol_2054 putative flavoprotein; PFAM: flavodoxin/nitric oxide synthase; Rubredoxin-type Fe(Cys)4 protein; SPTR: Q0AVA6 Putative flavoprotein; PFAM: Flavodoxin; Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_1537
symbol: Slip_1537
gene_biotype: protein_coding
description:
  COGs: COG2033 Desulfoferrodoxin; InterPro IPR002742:IPR004462:IPR004793; KEGG: ctc:CTC02454 desulfoferrodoxin-like protein; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; SPTR: Q891C6 Desulfoferrodoxin-like protein; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.


ensembl_gene_id: Slip_1538
symbol: Slip_1538
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017896:IPR001450:IPR017900; KEGG: sat:SYN_02901 iron-sulfur cluster-binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q2LRH4 Iron-sulfur cluster-binding protein; manually curated; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Slip_1539
symbol: Slip_1539
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein; COGs: COG5553 metal-dependent protein of the double-stranded beta helix superfamily; KEGG: sat:SYN_02900 putative cytoplasmic protein; SPTR: Q2LRH5 Hypothetical cytosolic protein; PFAM: Cysteine dioxygenase type I.


ensembl_gene_id: Slip_1540
symbol: Slip_1540
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0150; COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: pth:PTH_2586 hypothetical protein; PFAM: protein of unknown function UPF0150; SPTR: A5CZ20 Uncharacterized conserved protein; PFAM: Uncharacterised protein family (UPF0150).


ensembl_gene_id: Slip_1541
symbol: Slip_1541
gene_biotype: protein_coding
description:
  YcfA family protein; COGs: COG1724 periplasmic or secreted lipoprotein; InterPro IPR012933; KEGG: cyt:cce_3064 hypothetical protein; PFAM: YcfA family protein; SPTR: B0BGF1 Putative integron gene cassette protein; manually curated; PFAM: YcfA-like protein.


ensembl_gene_id: Slip_1545
symbol: Slip_1545
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csd2 family; COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR006482:IPR013418; KEGG: pth:PTH_1991 hypothetical protein; PFAM: CRISPR-associated protein TM1801; SPTR: A5D0R6 Uncharacterized protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family.


ensembl_gene_id: Slip_1546
symbol: Slip_1546
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csd1 family; InterPro IPR010144; KEGG: pth:PTH_1992 hypothetical protein; PFAM: CRISPR-associated protein CT1133; SPTR: A5D0R7 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein, Csd1 family.


ensembl_gene_id: Slip_1547
symbol: Slip_1547
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas5 family; InterPro IPR010155:IPR013422; KEGG: pth:PTH_1993 hypothetical protein; PFAM: CRISPR-associated protein CT1134; SPTR: A5D0R8 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, Dvulg subtype; CRISPR-associated protein Cas5, N-terminal domain.


ensembl_gene_id: Slip_1548
symbol: Slip_1548
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1203 helicase; InterProIPR014021:IPR001650:IPR006674:IPR011545:IPR 003607:IPR014001:IPR006483:IPR006474; KEGG: pth:PTH_1994 helicases; PFAM: metal-dependent phosphohydrolase HD sub domain; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; metal-dependent phosphohydrolase HD region; SPTR: A5D0R9 Predicted helicases; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain p [...]


ensembl_gene_id: Slip_1549
symbol: Slip_1549
gene_biotype: protein_coding
description:
  InterPro IPR005357; KEGG: ate:Athe_2006 protein of unknown function UPF0150; PFAM: protein of unknown function UPF0150; SPTR: B9MLA1 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0150).


ensembl_gene_id: Slip_1550
symbol: Slip_1550
gene_biotype: protein_coding
description:
  YcfA family protein; COGs: COG1724 periplasmic or secreted lipoprotein; InterPro IPR012933; KEGG: mta:Moth_0250 YcfA-like; PFAM: YcfA family protein; SPTR: Q2RLV4 YcfA-like; PFAM: YcfA-like protein.


ensembl_gene_id: Slip_1552
symbol: Slip_1552
gene_biotype: protein_coding
description:
  COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002433:IPR000183:IPR009006; KEGG: rba:RB8469 lysine/ornithine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; PRIAM: Ornithine decarboxylase; SPTR: Q7UFM7 Lysine/ornithine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Slip_1553
symbol: Slip_1553
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: swo:Swol_0666 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Q0AZ61 Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family.


ensembl_gene_id: Slip_1554
symbol: Slip_1554
gene_biotype: protein_coding
description:
  SufBD protein; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: swo:Swol_0665 hypothetical protein; PFAM: SufBD protein; SPTR: Q0AZ62 Putative uncharacterized protein; PFAM: Uncharacterized protein family (UPF0051).


ensembl_gene_id: Slip_1555
symbol: Slip_1555
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: swo:Swol_0664 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0AZ63 ABC transporter ATP-binding protein; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.


ensembl_gene_id: Slip_1556
symbol: Slip_1556
gene_biotype: protein_coding
description:
  FeoA family protein; InterPro IPR007167:IPR008988; KEGG: dka:DKAM_0071 FeoA family protein; PFAM: FeoA family protein; SPTR: B8D3C9 FeoA family protein; PFAM: FeoA domain.


ensembl_gene_id: Slip_1557
symbol: Slip_1557
gene_biotype: protein_coding
description:
  Small GTP-binding protein; COGs: COG0370 Fe2+ transport system protein B; InterPro IPR006073:IPR002917:IPR011642:IPR005225; KEGG: swo:Swol_0661 Fe2+ transport system protein B-like protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; SPTR: Q0AZ66 Fe2+ transport system protein B-like protein; TIGRFAM: small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain.


ensembl_gene_id: Slip_1558
symbol: Slip_1558
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: swo:Swol_0660 Fe2+/Zn2+ uptake regulation proteins; PFAM: ferric-uptake regulator; SPTR: Q0AZ67 Fe2+/Zn2+ uptake regulation proteins; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Slip_1559
symbol: Slip_1559
gene_biotype: protein_coding
description:
  COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterProIPR014362:IPR006095:IPR006097:IPR006096:IPR 016040; KEGG: cth:Cthe_0374 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: C6P885 Glutamate dehydrogenase (NADP(+)); PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: Slip_1561
symbol: carA
gene_biotype: protein_coding
description:
  COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR017926:IPR001317:IPR011702:IPR006220:IPR 002474:IPR000991:IPR006274; KEGG: dae:Dtox_2353 carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; SPTR: C8W0A9 Carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.


ensembl_gene_id: Slip_1562
symbol: Slip_1562
gene_biotype: protein_coding
description:
  COGs: COG0070 Glutamate synthase domain 3; InterPro IPR012061:IPR002489; KEGG: mpd:MCP_0708 glutamate synthase large subunit domain 3; PFAM: glutamate synthase alpha subunit domain protein; SPTR: C0GDH1 Glutamate synthase alpha subunit domain protein; PFAM: GXGXG motif.


ensembl_gene_id: Slip_1563
symbol: Slip_1563
gene_biotype: protein_coding
description:
  COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: ate:Athe_2358 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B9MN97 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Slip_1564
symbol: Slip_1564
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterPro IPR017896:IPR001450:IPR017900; KEGG: tpd:Teth39_1659 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C6Q8N0 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Slip_1565
symbol: Slip_1565
gene_biotype: protein_coding
description:
  COGs: COG0069 Glutamate synthase domain 2; InterProIPR017896:IPR001450:IPR002932:IPR013785:IPR 017900; KEGG: dth:DICTH_0168 glutamate synthase; PFAM: ferredoxin-dependent glutamate synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: Glutamate synthase (NADPH); SPTR: B5YBI5 Glutamate synthase; PFAM: Conserved region in glutamate synthase; Belongs to the glutamate synthase family.


ensembl_gene_id: Slip_1566
symbol: Slip_1566
gene_biotype: protein_coding
description:
  Glutamine amidotransferase class-II; COGs: COG0067 Glutamate synthase domain 1; InterPro IPR017932:IPR012375:IPR000583; KEGG: hor:Hore_16310 glutamate synthase (NADPH) GltB1 subunit; PFAM: glutamine amidotransferase class-II; SPTR: C0GDH5 Glutamine amidotransferase class-II; PFAM: Glutamine amidotransferases class-II.


ensembl_gene_id: Slip_1567
symbol: Slip_1567
gene_biotype: protein_coding
description:
  COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746:IPR004809; KEGG: adg:Adeg_0386 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: C9RBB3 Glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.


ensembl_gene_id: Slip_1568
symbol: Slip_1568
gene_biotype: protein_coding
description:
  Response regulator receiver and ANTAR domain protein; COGs: COG3707 Response regulator with putative antiterminator output domain; InterProIPR001789:IPR005561:IPR008327:IPR011991:IPR 011006; KEGG: mta:Moth_1295 response regulator receiver/ANTAR domain-containing protein; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver; SPTR: Q2RIY0 Response regulator receiver (CheY-like) and ANTAR domain protein; PFAM: Response regulator receiver domain; ANTAR domain.


ensembl_gene_id: Slip_1569
symbol: Slip_1569
gene_biotype: protein_coding
description:
  COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746:IPR004809; KEGG: pth:PTH_0909 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: A5D3U8 Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.


ensembl_gene_id: Slip_1570
symbol: nadE-2
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Slip_1571
symbol: Slip_1571
gene_biotype: protein_coding
description:
  Ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR018047; KEGG: dae:Dtox_1019 ammonium transporter; PFAM: ammonium transporter; SPTR: C8W3D8 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.


ensembl_gene_id: Slip_1572
symbol: Slip_1572
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR015867:IPR011322:IPR017918; KEGG: csc:Csac_2476 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: A4XMB8 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Slip_1573
symbol: Slip_1573
gene_biotype: protein_coding
description:
  COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR000583:IPR001962:IPR014729:IPR 001827:IPR006426; KEGG: pth:PTH_0673 asparagine synthase; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: A5D4J4 Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).


ensembl_gene_id: Slip_1574
symbol: Slip_1574
gene_biotype: protein_coding
description:
  Small GTP-binding protein; COGs: COG1160 GTPase; InterPro IPR002917:IPR005225; KEGG: mta:Moth_1277 small GTP-binding protein domain-containing protein; PFAM: GTP-binding protein HSR1-related; SPTR: Q2RIZ8 Small GTP-binding protein domain; TIGRFAM: small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.


ensembl_gene_id: Slip_1575
symbol: Slip_1575
gene_biotype: protein_coding
description:
  Fumarate lyase; COGs: COG1027 Aspartate ammonia-lyase; InterProIPR000362:IPR003031:IPR018951:IPR008948:IPR 020557; KEGG: mta:Moth_1273 aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; SPTR: Q2RJ02 Fumarase; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase.


ensembl_gene_id: Slip_1577
symbol: carB-2
gene_biotype: protein_coding
description:
  COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR011761:IPR005483:IPR005481:IPR005479:IPR 005480:IPR011607:IPR013817:IPR013816:IPR016185:IPR006275; KEGG: swo:Swol_1281 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: Q0AXG4 Carbamoyl-phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase  [...]


ensembl_gene_id: Slip_1578
symbol: Slip_1578
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: aac:Aaci_0213 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C9KN39 Putative fosmidomycin resistance protein; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Slip_1579
symbol: Slip_1579
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175:IPR013813; KEGG: chy:CHY_0253 endoribonuclease L-PSP family protein; PFAM: Endoribonuclease L-PSP; SPTR: Q3AFF9 Endoribonuclease L-PSP family protein; PFAM: Endoribonuclease L-PSP.


ensembl_gene_id: Slip_1580
symbol: Slip_1580
gene_biotype: protein_coding
description:
  Sodium/calcium exchanger membrane region; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837; KEGG: swo:Swol_0654 sodium/calcium exchanger membrane region; PFAM: sodium/calcium exchanger membrane region; SPTR: Q0AZ73 Sodium/calcium exchanger membrane region; PFAM: Sodium/calcium exchanger protein.


ensembl_gene_id: Slip_1581
symbol: Slip_1581
gene_biotype: protein_coding
description:
  COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013:IPR016195:IPR010140; KEGG: swo:Swol_0653 histidinol-phosphatase; PFAM: PHP domain protein; SPTR: Q0AZ74 Histidinol-phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: Slip_1582
symbol: Slip_1582
gene_biotype: protein_coding
description:
  COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: swo:Swol_0652 putative phosphatase; PFAM: conserved hypothetical protein; SPTR: Q0AZ75 Conserved putative phosphatase; PFAM: Protein of unknown function (DUF1015).


ensembl_gene_id: Slip_1583
symbol: Slip_1583
gene_biotype: protein_coding
description:
  Ferredoxin; COGs: COG3894 Uncharacterized metal-binding protein; InterPro IPR001041:IPR012675; KEGG: swo:Swol_0649 hypothetical protein; PFAM: ferredoxin; SPTR: Q0AZ78 Putative uncharacterized protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain.


ensembl_gene_id: Slip_1584
symbol: Slip_1584
gene_biotype: protein_coding
description:
  COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: swo:Swol_0782 molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: Q0AYV1 Molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB.


ensembl_gene_id: Slip_1586
symbol: Slip_1586
gene_biotype: protein_coding
description:
  COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR010992; KEGG: swo:Swol_0648 non-specific DNA-binding protein HBsu; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Q0AZ79 Bacterial nucleoid protein Hbs; PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Slip_1587
symbol: Slip_1587
gene_biotype: protein_coding
description:
  COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203:IPR013985; KEGG: swo:Swol_1835 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: Q0AVX1 Aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3.


ensembl_gene_id: Slip_1588
symbol: Slip_1588
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ATP dependent DNA helicase; K02210 minichromosome maintenance protein 7 (cell division control protein 47); SPTR: A7ARB5 ATP dependent DNA helicase, putative.


ensembl_gene_id: Slip_1590
symbol: Slip_1590
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: swo:Swol_0647 HD-GYP domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AZ80 HD-GYP domain containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_1591
symbol: Slip_1591
gene_biotype: protein_coding
description:
  Protein of unknown function DUF34; COGs: COG0327 conserved hypothetical protein; InterPro IPR017221:IPR002678:IPR011322; KEGG: swo:Swol_0646 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Q0AZ81 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: Slip_1592
symbol: Slip_1592
gene_biotype: protein_coding
description:
  Protein of unknown function DUF633; COGs: COG2384 SAM-dependent methyltransferase; InterPro IPR006901; KEGG: swo:Swol_0645 hypothetical protein; PFAM: protein of unknown function DUF633; SPTR: Q0AZ82 Putative uncharacterized protein; PFAM: Family of unknown function (DUF633).


ensembl_gene_id: Slip_1593
symbol: Slip_1593
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: reh:H16_A2379 response regulator; SPTR: Q46ZG8 Two component transcriptional regulator, winged helix family.


ensembl_gene_id: Slip_1594
symbol: Slip_1594
gene_biotype: protein_coding
description:
  DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterPro IPR001091:IPR002941; KEGG: npu:Npun_R4784 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: B2IZ26 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: Slip_1595
symbol: Slip_1595
gene_biotype: protein_coding
description:
  InterPro IPR017896:IPR001450:IPR017900; KEGG: gme:Gmet_2239 4Fe-4S ferredoxin, iron-sulfur binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q39TF8 4Fe-4S ferredoxin, iron-sulfur binding protein; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Slip_1598
symbol: Slip_1598
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pmh:P9215_18131 30S ribosomal protein S5; SPTR: C0FST7 Putative uncharacterized protein.


ensembl_gene_id: Slip_1601
symbol: Slip_1601
gene_biotype: protein_coding
description:
  COGs: COG1569 nucleic acid-binding protein contains PIN domain; InterPro IPR002850; KEGG: dol:Dole_0924 nucleic acid binding protein; SPTR: A8ZWC6 Nucleic acid-binding protein contains PIN domain-like protein; TIGRFAM: conserved hypothetical protein TIGR00305.


ensembl_gene_id: Slip_1604
symbol: Slip_1604
gene_biotype: protein_coding
description:
  InterPro IPR000305; KEGG: cli:Clim_2264 hypothetical protein; PFAM: Excinuclease ABC C subunit domain protein; SPTR: B3EHC5 Putative uncharacterized protein; PFAM: GIY-YIG catalytic domain.


ensembl_gene_id: Slip_1605
symbol: Slip_1605
gene_biotype: protein_coding
description:
  Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584:IPR009057; KEGG: gtn:GTNG_3485 transposase; PFAM: Integrase catalytic region; SPTR: A4ITX7 Transposase; PFAM: Integrase core domain.


ensembl_gene_id: Slip_1606
symbol: Slip_1606
gene_biotype: protein_coding
description:
  IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR002611:IPR003593; KEGG: gtn:GTNG_3486 IS21 family transposase; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; SPTR: C6PFG8 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP binding protein.


ensembl_gene_id: Slip_1608
symbol: Slip_1608
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); KEGG: hmo:HM1_0158 hypothetical protein; SPTR: B0TDR4 Putative uncharacterized protein.


ensembl_gene_id: Slip_1610
symbol: Slip_1610
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1863; InterPro IPR015032; KEGG: ajs:Ajs_2632 hypothetical protein; PFAM: Domain of unknown function DUF1863; SPTR: A1W964 Putative uncharacterized protein; PFAM: MTH538 TIR-like domain (DUF1863).


ensembl_gene_id: Slip_1611
symbol: Slip_1611
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cbe:Cbei_1713 hemerythrin-like metal-binding protein; SPTR: A6LU55 Hemerythrin-like metal-binding protein.


ensembl_gene_id: Slip_1617
symbol: Slip_1617
gene_biotype: protein_coding
description:
  COGs: COG1787 endonuclease distantly related to Holliday junction resolvase and Mrr-like restriction enzyme; InterPro IPR007560:IPR011335; KEGG: chy:CHY_1700 putative prophage LambdaCh01, restriction endonuclease; PFAM: restriction endonuclease; SPTR: Q3ABG4 Putative prophage LambdaCh01, restriction endonuclease; PFAM: Restriction endonuclease.


ensembl_gene_id: Slip_1618
symbol: Slip_1618
gene_biotype: protein_coding
description:
  InterPro IPR007159; KEGG: sti:Sthe_2348 transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; SPTR: D1C7C3 Transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_1619
symbol: Slip_1619
gene_biotype: protein_coding
description:
  COGs: COG1569 nucleic acid-binding protein contains PIN domain; InterPro IPR002716:IPR002850; KEGG: cyt:cce_0612 hypothetical protein; PFAM: PilT protein domain protein; SPTR: Q4BZX2 Putative uncharacterized protein; PFAM: PIN domain; TIGRFAM: conserved hypothetical protein TIGR00305.


ensembl_gene_id: Slip_1620
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Slip_1621
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Slip_1622
symbol: Slip_1622
gene_biotype: protein_coding
description:
  COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607:IPR006261; KEGG: swo:Swol_1509 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AWU2 Deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: Slip_1623
symbol: Slip_1623
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: swo:Swol_1510 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Q0AWU1 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Slip_1624
symbol: Slip_1624
gene_biotype: protein_coding
description:
  COGs: COG3409 Putative peptidoglycan-binding domain-containing protein; InterPro IPR002477:IPR018392:IPR002482; KEGG: pth:PTH_1023 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; Peptidoglycan-binding domain 1 protein; SMART: Peptidoglycan-binding LysM; SPTR: A5D3J7 Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain; LysM domain.


ensembl_gene_id: Slip_1625
symbol: Slip_1625
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterProIPR010121:IPR002192:IPR008279:IPR000121:IPR 013815:IPR013816:IPR015813:IPR018274; KEGG: swo:Swol_1512 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; PRIAM: Pyruvate, phosphate dikinase; SPTR: Q0AWT9 Pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/ [...]


ensembl_gene_id: Slip_1626
symbol: Slip_1626
gene_biotype: protein_coding
description:
  Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Slip_1627
symbol: Slip_1627
gene_biotype: protein_coding
description:
  Putative signal transduction protein with CBS domains; InterPro IPR000644:IPR016842:IPR013196; KEGG: swo:Swol_1514 CBS domain-containing protein; PFAM: CBS domain containing protein; Helix-turn-helix type 11 domain protein; SMART: CBS domain containing protein; SPTR: Q0AWT7 CBS domain protein; PFAM: HTH domain; CBS domain.


ensembl_gene_id: Slip_1628
symbol: glyS
gene_biotype: protein_coding
description:
  COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR006194:IPR002311:IPR008909:IPR015944; KEGG: swo:Swol_1515 glycine--tRNA ligase; PFAM: glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain protein; PRIAM: Glycine--tRNA ligase; SPTR: Q0AWT6 Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit.


ensembl_gene_id: Slip_1629
symbol: glyQ
gene_biotype: protein_coding
description:
  COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR006194:IPR002310; KEGG: swo:Swol_1516 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: Q0AWT5 Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit.


ensembl_gene_id: Slip_1630
symbol: Slip_1630
gene_biotype: protein_coding
description:
  KEGG: lxx:Lxx07150 translation initiation factor IF-2; SPTR: Q6AG49 Translation initiation factor IF-2.


ensembl_gene_id: Slip_1634
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: Slip_1635
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Slip_1636
symbol: Slip_1636
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Slip_1637
symbol: Slip_1637
gene_biotype: protein_coding
description:
  COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: swo:Swol_1563 diacylglycerol kinase; PFAM: diacylglycerol kinase; SPTR: Q0AWN8 Undecaprenol kinase; PFAM: Prokaryotic diacylglycerol kinase.


ensembl_gene_id: Slip_1638
symbol: ybeY
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Slip_1639
symbol: Slip_1639
gene_biotype: protein_coding
description:
  7TM receptor with intracellular metal dependent phosphohydrolase; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterProIPR011624:IPR011621:IPR006674:IPR003607:IPR 006675; KEGG: swo:Swol_1565 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AWN6 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; 7TM-HD extracellular; 7 [...]


ensembl_gene_id: Slip_1640
symbol: Slip_1640
gene_biotype: protein_coding
description:
  PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: swo:Swol_1566 PhoH-like protein; PFAM: PhoH family protein; SPTR: Q0AWN5 PhoH-like protein; PFAM: PhoH-like protein.


ensembl_gene_id: Slip_1641
symbol: Slip_1641
gene_biotype: protein_coding
description:
  Sporulation protein YqfD; InterPro IPR010690; KEGG: swo:Swol_1567 putative stage IV sporulation YqfD; PFAM: putative stage IV sporulation YqfD; SPTR: Q0AWN4 Putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.


ensembl_gene_id: Slip_1642
symbol: Slip_1642
gene_biotype: protein_coding
description:
  Sporulation protein YqfC; InterPro IPR009877; KEGG: swo:Swol_1568 hypothetical protein; PFAM: protein of unknown function DUF1429; SPTR: Q0AWN3 Putative uncharacterized protein; TIGRFAM: sporulation protein YqfC; PFAM: YabP family; TIGRFAM: sporulation protein YqfC.


ensembl_gene_id: Slip_1643
symbol: Slip_1643
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: swo:Swol_1502 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AWU9 Metal dependent phosphohydrolase; PFAM: HD domain.


ensembl_gene_id: Slip_1644
symbol: rpsU
gene_biotype: protein_coding
description:
  Ribosomal protein S21; InterPro IPR001911:IPR018278; KEGG: swo:Swol_1573 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: Q0AWM8 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: Slip_1645
symbol: Slip_1645
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: swo:Swol_1572 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; PFAM: histidine triad (HIT) protein; SPTR: Q0AWM9 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; PFAM: HIT domain.


ensembl_gene_id: Slip_1646
symbol: Slip_1646
gene_biotype: protein_coding
description:
  KEGG: drm:Dred_2099 hypothetical protein; SPTR: C2GGP2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892).


ensembl_gene_id: Slip_1647
symbol: Slip_1647
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR006638:IPR005839:IPR 006467; KEGG: swo:Swol_1574 MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AWM7 MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; manually curated; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family.


ensembl_gene_id: Slip_1648
symbol: Slip_1648
gene_biotype: protein_coding
description:
  Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Slip_1649
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: Slip_1650
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: Slip_1652
symbol: grpE
gene_biotype: protein_coding
description:
  GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: Slip_1653
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: Slip_1654
symbol: Slip_1654
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Slip_1655
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: Slip_1657
symbol: Slip_1657
gene_biotype: protein_coding
description:
  Stage II sporulation protein P; InterPro IPR010897; KEGG: swo:Swol_1586 hypothetical protein; PFAM: Stage II sporulation P family protein; SPTR: Q0AWL6 Putative uncharacterized protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.


ensembl_gene_id: Slip_1658
symbol: Slip_1658
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_0580 hypothetical protein; SPTR: Q2RKX9 Putative uncharacterized protein; PFAM: Membrane protein of unknown function.


ensembl_gene_id: Slip_1660
symbol: Slip_1660
gene_biotype: protein_coding
description:
  COGs: COG3546 Mn-containing catalase; InterPro IPR012347:IPR009078; KEGG: chy:CHY_2272 cotJC protein; SPTR: Q3A9V3 CotJC protein; PFAM: Ferritin-like domain; Belongs to the Dps family.


ensembl_gene_id: Slip_1661
symbol: Slip_1661
gene_biotype: protein_coding
description:
  NAD synthase; COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; InterPro IPR005232:IPR003694:IPR014729; KEGG: chy:CHY_1281 hypothetical protein; PFAM: NAD synthase; SPTR: Q3ACL9 Putative uncharacterized protein; PFAM: NAD synthase; TIGRFAM: conserved hypothetical protein TIGR00268.


ensembl_gene_id: Slip_1662
symbol: Slip_1662
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR001757:IPR001756:IPR008250:IPR 005834:IPR018303:IPR017969:IPR000150:IPR006403:IPR006416; KEGG: drm:Dred_2982 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A4J8T2 Heavy metal translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM [...]


ensembl_gene_id: Slip_1664
symbol: Slip_1664
gene_biotype: protein_coding
description:
  COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372:IPR008921:IPR005790; KEGG: swo:Swol_1588 DNA polymerase III delta subunit-like protein; PFAM: DNA polymerase III delta; SPTR: Q0AWL4 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit.


ensembl_gene_id: Slip_1665
symbol: Slip_1665
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR013027:IPR006076; KEGG: mta:Moth_2310 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: A1HRK2 FAD dependent oxidoreductase; PFAM: HI0933-like protein.


ensembl_gene_id: Slip_1666
symbol: Slip_1666
gene_biotype: protein_coding
description:
  DNA internalization-related competence protein ComEC/Rec2; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004477:IPR004797; KEGG: swo:Swol_1595 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; SPTR: Q0AWK7 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2.


ensembl_gene_id: Slip_1667
symbol: Slip_1667
gene_biotype: protein_coding
description:
  Competence protein ComEA helix-hairpin-helix repeat protein; COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR019554:IPR010994:IPR003583:IPR004509; KEGG: swo:Swol_1596 competence protein ComEA helix-hairpin-helix region; PFAM: Soluble ligand binding domain; SPTR: Q0AWK6 Competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: General secretion pathway protein K; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein.


ensembl_gene_id: Slip_1668
symbol: Slip_1668
gene_biotype: protein_coding
description:
  methylated-DNA/protein- cysteinemethyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048:IPR011991:IPR001497; KEGG: swo:Swol_1600 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SPTR: Q0AWK3 Methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase.


ensembl_gene_id: Slip_1669
symbol: leuS
gene_biotype: protein_coding
description:
  COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR002302:IPR015413:IPR013155:IPR014729:IPR 009008:IPR009080:IPR001412; KEGG: mta:Moth_0568 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; tRNA synthetase class I (M); SPTR: Q0AWK4 Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Slip_1670
symbol: Slip_1670
gene_biotype: protein_coding
description:
  Transcriptional regulator, CdaR; COGs: COG3835 Sugar diacid utilization regulator; KEGG: dsy:DSY2608 hypothetical protein; SPTR: Q24U95 Putative uncharacterized protein.


ensembl_gene_id: Slip_1671
symbol: Slip_1671
gene_biotype: protein_coding
description:
  Sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR020441:IPR013656:IPR002197:IPR 009057:IPR003593; KEGG: dsy:DSY4719 hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Q24N84 Putative uncharacterized protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: Slip_1672
symbol: Slip_1672
gene_biotype: protein_coding
description:
  COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR017909:IPR003953:IPR006311; KEGG: dsy:DSY2898 putative fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase; SPTR: Q24TF5 Putative fumarate reductase flavoprotein subunit; PFAM: FAD binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.


ensembl_gene_id: Slip_1673
symbol: Slip_1673
gene_biotype: protein_coding
description:
  Integrase catalytic subunit; InterPro IPR017894; KEGG: amt:Amet_4684 integrase catalytic subunit; SPTR: A6TM43 Integrase, catalytic region.


ensembl_gene_id: Slip_1675
symbol: Slip_1675
gene_biotype: protein_coding
description:
  NapC/NirT cytochrome c domain protein; InterPro IPR011031:IPR005126:IPR012286; KEGG: ele:Elen_1005 hypothetical protein; PFAM: NapC/NirT cytochrome c domain protein; SPTR: C4V3C7 Putative uncharacterized protein; PFAM: NapC/NirT cytochrome c family, N-terminal region.


ensembl_gene_id: Slip_1677
symbol: Slip_1677
gene_biotype: protein_coding
description:
  COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541:IPR017562; KEGG: dhd:Dhaf_3357 cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; SPTR: Q0PIF5 Cytochrome c biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.


ensembl_gene_id: Slip_1678
symbol: Slip_1678
gene_biotype: protein_coding
description:
  COGs: COG5632 N-acetylmuramoyl-L-alanine amidase; InterPro IPR001119:IPR002502; KEGG: bbe:BBR47_50840 putative N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; S-layer domain protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; S-layer homology domain.


ensembl_gene_id: Slip_1679
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Slip_1680
symbol: Slip_1680
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism; InterPro IPR006674:IPR003607:IPR005249:IPR006675; KEGG: swo:Swol_1602 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AWK1 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: conserved hypothetical protein TIGR00488; uncharacterized domain HDIG.


ensembl_gene_id: Slip_1681
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Slip_1683
symbol: Slip_1683
gene_biotype: protein_coding
description:
  Pyridoxal-5'-phosphate-dependent protein beta subunit; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: swo:Swol_1605 O-acetylserine (thiol)-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Q0AWJ8 Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases.


ensembl_gene_id: Slip_1685
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: Slip_1686
symbol: Slip_1686
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: swo:Swol_1180 hypothetical protein; PFAM: AMP-dependent synthetase and ligase; SPTR: Q0AXR5 Putative uncharacterized protein; PFAM: AMP-binding enzyme.


ensembl_gene_id: Slip_1687
symbol: Slip_1687
gene_biotype: protein_coding
description:
  Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR000802:IPR004680; KEGG: drm:Dred_1990 citrate transporter; PFAM: Citrate transporter; SPTR: A4J605 Citrate transporter; PFAM: Citrate transporter.


ensembl_gene_id: Slip_1690
symbol: Slip_1690
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: swo:Swol_2012 ABC-type dipeptide transport system periplasmic component-like protein; PFAM: extracellular solute-binding protein family 5; SPTR: Q0AVE7 ABC-type dipeptide transport system periplasmic component-like protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.


ensembl_gene_id: Slip_1691
symbol: Slip_1691
gene_biotype: protein_coding
description:
  COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: swo:Swol_2013 secreted protein; PFAM: Lytic transglycosylase catalytic; SPTR: Q0AVE6 Secreted protein; PFAM: Transglycosylase SLT domain.


ensembl_gene_id: Slip_1692
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Slip_1694
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: Slip_1695
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: Slip_1697
symbol: Slip_1697
gene_biotype: protein_coding
description:
  COGs: COG0407 Uroporphyrinogen-III decarboxylase; KEGG: dae:Dtox_2801 hypothetical protein; SPTR: C6Q2M9 Uroporphyrinogen-III decarboxylase-like protein; PFAM: Uroporphyrinogen decarboxylase (URO-D).


ensembl_gene_id: Slip_1698
symbol: Slip_1698
gene_biotype: protein_coding
description:
  TOBE domain protein; InterPro IPR005116:IPR008995:IPR004606; KEGG: swo:Swol_1119 ABC transporter solute-binding protein; PFAM: TOBE domain protein; SPTR: Q0AXX5 ABC transporter solute-binding protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain.


ensembl_gene_id: Slip_1699
symbol: Slip_1699
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hmo:HM1_0537 peptidase, U32 family protein; SPTR: B0TFZ4 Peptidase, u32 family protein.


ensembl_gene_id: Slip_1700
symbol: Slip_1700
gene_biotype: protein_coding
description:
  Peptidoglycan-binding domain 1 protein; InterPro IPR002477; KEGG: swo:Swol_2028 hypothetical protein; PFAM: Peptidoglycan-binding domain 1 protein; SPTR: Q0AVD2 Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain.


ensembl_gene_id: Slip_1701
symbol: Slip_1701
gene_biotype: protein_coding
description:
  COGs: COG0469 Pyruvate kinase; InterProIPR015793:IPR015794:IPR008279:IPR015813:IPR 015795:IPR011037:IPR018209:IPR001697; KEGG: swo:Swol_2040 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region; SPTR: Q0AVC0 Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.


ensembl_gene_id: Slip_1702
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: Slip_1703
symbol: Slip_1703
gene_biotype: protein_coding
description:
  Tryptophan RNA-binding attenuator protein; InterPro IPR000824:IPR016031; KEGG: swo:Swol_2042 transcription attenuation protein MtrB; PFAM: tryptophan RNA-binding attenuator protein; SPTR: Q0AVB8 Transcription attenuation protein MtrB; PFAM: Tryptophan RNA-binding attenuator protein.


ensembl_gene_id: Slip_1704
symbol: Slip_1704
gene_biotype: protein_coding
description:
  COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004013:IPR011708:IPR004365:IPR016195:IPR 016027:IPR003141:IPR004805; KEGG: swo:Swol_2043 DNA polymerase III DnaE; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: Q0AVB7 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc).


ensembl_gene_id: Slip_1705
symbol: Slip_1705
gene_biotype: protein_coding
description:
  KEGG: sth:STH2659 small acid-soluble spore protein; SPTR: Q67L02 Small acid-soluble spore protein; PFAM: Small, acid-soluble spore proteins, alpha/beta type.


ensembl_gene_id: Slip_1706
symbol: Slip_1706
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; InterPro IPR003779; KEGG: mta:Moth_1895 alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; SPTR: Q2RH94 Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain.


ensembl_gene_id: Slip_1711
symbol: Slip_1711
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR010916; KEGG: pjd:Pjdr2_1344 signal transduction histidine kinase, nitrogen specific, NtrB; SPTR: C6CWF7 Sensor protein.


ensembl_gene_id: Slip_1712
symbol: Slip_1712
gene_biotype: protein_coding
description:
  GPR1/FUN34/yaaH family protein; COGs: COG1584 membrane protein; InterPro IPR000791; KEGG: swo:Swol_0383 GPR1/FUN34/YaaH family protein; PFAM: GPR1/FUN34/yaaH family protein; SPTR: Q0AZY3 GPR1/FUN34/YaaH family protein; PFAM: GPR1/FUN34/yaaH family.


ensembl_gene_id: Slip_1713
symbol: Slip_1713
gene_biotype: protein_coding
description:
  Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Slip_1714
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: Slip_1715
symbol: Slip_1715
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: ypb:YPTS_0030 thioesterase domain-containing protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C4UTL4 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Slip_1716
symbol: Slip_1716
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR000086:IPR015797; KEGG: swo:Swol_1032 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: A6CJN2 Putative uncharacterized protein; PFAM: NUDIX domain.


ensembl_gene_id: Slip_1717
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: Slip_1718
symbol: Slip_1718
gene_biotype: protein_coding
description:
  Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: swo:Swol_1107 peptidase U32; PFAM: peptidase U32; SPTR: Q0AXY7 Peptidase U32; PFAM: Collagenase; Peptidase family U32.


ensembl_gene_id: Slip_1719
symbol: Slip_1719
gene_biotype: protein_coding
description:
  KEGG: adg:Adeg_0543 hypothetical protein; SPTR: C9RBR4 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3).


ensembl_gene_id: Slip_1720
symbol: Slip_1720
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2283; InterPro IPR019270; KEGG: rmr:Rmar_1463 hypothetical protein; PFAM: Protein of unknown function DUF2283; SPTR: D0MIP2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2283).


ensembl_gene_id: Slip_1721
symbol: Slip_1721
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; COGs: COG1238 membrane protein; InterPro IPR015414:IPR000326:IPR016118; KEGG: drm:Dred_2300 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; SMART: phosphoesterase PA-phosphatase related; SPTR: A4J6V7 Putative uncharacterized protein; PFAM: PAP2 superfamily; SNARE associated Golgi protein.


ensembl_gene_id: Slip_1723
symbol: Slip_1723
gene_biotype: protein_coding
description:
  PHP domain protein; COGs: COG1796 DNA polymerase IV (family X); InterProIPR002008:IPR004013:IPR010996:IPR016195:IPR 002054:IPR003141; KEGG: swo:Swol_1105 DNA-dependent DNA polymerase family X protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase X; SPTR: Q0AXY9 DNA-dependent DNA polymerase family X; PFAM: PHP domain.


ensembl_gene_id: Slip_1724
symbol: Slip_1724
gene_biotype: protein_coding
description:
  Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: Slip_1725
symbol: Slip_1725
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR011989:IPR016024:IPR004155; KEGG: swo:Swol_1458 hypothetical protein; SPTR: Q0AWY9 Putative uncharacterized protein.


ensembl_gene_id: Slip_1726
symbol: Slip_1726
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: swo:Swol_1457 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: Q0AWZ0 MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.


ensembl_gene_id: Slip_1727
symbol: Slip_1727
gene_biotype: protein_coding
description:
  COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: swo:Swol_1456 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q0AWZ1 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Slip_1728
symbol: Slip_1728
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR005467:IPR002545:IPR008207:IPR004358:IPR 004105:IPR003594:IPR009082; KEGG: swo:Swol_1455 putative CheA signal transduction histidine kinases; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: Q0AWZ2 CheA signal transduction histidine kinase; PFAM: CheW-like domain; Histidine kinase-, [...]


ensembl_gene_id: Slip_1729
symbol: Slip_1729
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: swo:Swol_1454 chromosome partitioning protein; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: Q0AWZ3 Chromosome partitioning protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_1730
symbol: Slip_1730
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat protein; InterPro IPR013026:IPR013105; KEGG: swo:Swol_1453 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: Q0AWZ4 Putative uncharacterized protein.


ensembl_gene_id: Slip_1731
symbol: Slip_1731
gene_biotype: protein_coding
description:
  Heat shock protein 70; COGs: COG0443 Molecular chaperone; InterPro IPR001023:IPR013126:IPR018181; KEGG: swo:Swol_1452 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Q0AWZ5 Molecular chaperone DnaK; PFAM: Hsp70 protein.


ensembl_gene_id: Slip_1733
symbol: Slip_1733
gene_biotype: protein_coding
description:
  CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: swo:Swol_1450 chemotaxis signal transduction protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Q0AWZ7 CheW protein; PFAM: CheW-like domain.


ensembl_gene_id: Slip_1735
symbol: Slip_1735
gene_biotype: protein_coding
description:
  COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: swo:Swol_1448 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q0AWZ9 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Slip_1736
symbol: Slip_1736
gene_biotype: protein_coding
description:
  Chemotaxis operon protein; COGs: COG1406 inhibitor of MCP methylation homolog of CheC; KEGG: swo:Swol_1447 chemotaxis operon protein; SPTR: Q0AX00 Chemotaxis operon protein.


ensembl_gene_id: Slip_1737
symbol: Slip_1737
gene_biotype: protein_coding
description:
  CheC domain protein; COGs: COG1406 inhibitor of MCP methylation homolog of CheC; InterPro IPR007597; KEGG: swo:Swol_1446 CheX protein (uncharacterized ORF in chemotaxis operon); PFAM: CheC domain protein; SPTR: Q0AX01 CheX protein (Uncharacterized ORF in chemotaxis operon); PFAM: CheC-like family.


ensembl_gene_id: Slip_1739
symbol: Slip_1739
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR008611; KEGG: swo:Swol_1451 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q0AWZ6 Putative methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_1740
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Slip_1741
symbol: Slip_1741
gene_biotype: protein_coding
description:
  COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099:IPR002912:IPR016040; KEGG: swo:Swol_1349 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; amino acid-binding ACT domain protein; PRIAM: Prephenate dehydrogenase; SPTR: Q0AX97 Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; ACT domain.


ensembl_gene_id: Slip_1742
symbol: Slip_1742
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR013785:IPR006268; KEGG: swo:Swol_1348 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Q0AX98 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.


ensembl_gene_id: Slip_1744
symbol: Slip_1744
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: drm:Dred_0650 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: A4J286 Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Slip_1745
symbol: Slip_1745
gene_biotype: protein_coding
description:
  Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006129:IPR006128:IPR006127; KEGG: cth:Cthe_0547 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: A3DCV4 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: Slip_1746
symbol: Slip_1746
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: amt:Amet_1173 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6TMG3 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_1747
symbol: Slip_1747
gene_biotype: protein_coding
description:
  ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: amt:Amet_1174 ABC-3 protein; PFAM: ABC-3 protein; SPTR: A6TMG4 ABC-3 protein; PFAM: ABC 3 transport family.


ensembl_gene_id: Slip_1748
symbol: Slip_1748
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR013785:IPR006268; KEGG: swo:Swol_1388 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Q0AX59 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.


ensembl_gene_id: Slip_1749
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Slip_1750
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Slip_1751
symbol: Slip_1751
gene_biotype: protein_coding
description:
  COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798:IPR013785:IPR011060; KEGG: swo:Swol_0359 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Q0B005 Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase.


ensembl_gene_id: Slip_1752
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Slip_1753
symbol: Slip_1753
gene_biotype: protein_coding
description:
  Response regulator receiver protein; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterProIPR001789:IPR017926:IPR006220:IPR011702:IPR 001317:IPR000991:IPR006221; KEGG: dau:Daud_1190 glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; SPTR: B1I3Z9 Glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.


ensembl_gene_id: Slip_1754
symbol: Slip_1754
gene_biotype: protein_coding
description:
  COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999:IPR006805:IPR015890:IPR005801; KEGG: gym:GYMC10_2209 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: C6J445 Anthranilate synthase component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme.


ensembl_gene_id: Slip_1755
symbol: Slip_1755
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524:IPR011991; KEGG: amt:Amet_1323 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A6TMV7 Regulatory protein GntR, HTH; PFAM: Bacterial regulatory proteins, gntR family.


ensembl_gene_id: Slip_1756
symbol: Slip_1756
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: amt:Amet_1324 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6TMV8 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_1758
symbol: Slip_1758
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 1; COGs: COG2998 ABC-type tungstate transport system permease component; InterPro IPR006059; KEGG: swo:Swol_1630 ABC-type tungstate transport system permease component-like protein; PFAM: extracellular solute-binding protein family 1; SPTR: Q0AWH5 ABC-type tungstate transport system permease component-like protein; PFAM: Bacterial extracellular solute-binding protein.


ensembl_gene_id: Slip_1759
symbol: Slip_1759
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: swo:Swol_1631 tungsten transporter, ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0AWH4 Tungsten transporter, ATP binding protein; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Slip_1760
symbol: Slip_1760
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: swo:Swol_1632 sulfate/tungstate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q0AWH3 Sulfate/tungstate uptake family ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Slip_1762
symbol: Slip_1762
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate protein domain protein TPP-binding protein; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: adg:Adeg_1384 thiamine pyrophosphate protein domain protein TPP-binding protein; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: C9R857 Thiamine pyrophosphate protein domain protein TPP-binding protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.


ensembl_gene_id: Slip_1763
symbol: Slip_1763
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR002869; KEGG: tpd:Teth39_0467 pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: B0KD36 Pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase.


ensembl_gene_id: Slip_1764
symbol: Slip_1764
gene_biotype: protein_coding
description:
  COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR000634:IPR004450; KEGG: swo:Swol_1302 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: Q0AXE4 L-threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase.


ensembl_gene_id: Slip_1765
symbol: Slip_1765
gene_biotype: protein_coding
description:
  COGs: COG0388 amidohydrolase; InterPro IPR003010:IPR001110; KEGG: dae:Dtox_3613 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C8VW38 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase.


ensembl_gene_id: Slip_1766
symbol: Slip_1766
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: Slip_1767
symbol: Slip_1767
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1396 hypothetical protein; SPTR: Q0AX51 Putative uncharacterized protein; PFAM: HutP.


ensembl_gene_id: Slip_1769
symbol: Slip_1769
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: dhd:Dhaf_2912 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Q24WP3 Putative uncharacterized protein; PFAM: AIR carboxylase.


ensembl_gene_id: Slip_1770
symbol: Slip_1770
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR002869; KEGG: swo:Swol_1398 2-oxoglutarate oxidoreductase gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: Q0AX49 2-oxoglutarate oxidoreductase gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase.


ensembl_gene_id: Slip_1771
symbol: Slip_1771
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate protein domain protein TPP-binding protein; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: swo:Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q0AX48 Putative keto/oxoacid ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.


ensembl_gene_id: Slip_1772
symbol: Slip_1772
gene_biotype: protein_coding
description:
  Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880:IPR005476:IPR015941:IPR009014; KEGG: swo:Swol_1400 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; SPTR: Q0AX47 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit; PFAM: domain; Transketolase, C-terminal domain.


ensembl_gene_id: Slip_1773
symbol: Slip_1773
gene_biotype: protein_coding
description:
  InterPro IPR017896:IPR001450:IPR017900; KEGG: swo:Swol_1401 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AX46 4Fe-4S ferredoxin, iron-sulfur binding.


ensembl_gene_id: Slip_1775
symbol: Slip_1775
gene_biotype: protein_coding
description:
  Glycosidase-related protein; COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: swo:Swol_1919 glycosylase-like protein; PFAM: glycosidase PH1107-related; SPTR: Q0AVN8 Glycosylase-like protein; PFAM: Domain of unknown function (DUF377); TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.


ensembl_gene_id: Slip_1776
symbol: Slip_1776
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR013976:IPR003607:IPR006675; KEGG: swo:Swol_1403 putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AX44 Putative signal transduction protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_1777
symbol: Slip_1777
gene_biotype: protein_coding
description:
  KEGG: dau:Daud_1195 hypothetical protein; SPTR: B1I3X5 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Slip_1778
symbol: Slip_1778
gene_biotype: protein_coding
description:
  Pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR002942:IPR006145:IPR020103:IPR018496:IPR 000748; KEGG: swo:Swol_1406 ribosomal large subunit pseudouridine synthaseB (pseudouridylate synthase) (uracil hydrolyase); PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Q0AX41 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Slip_1780
symbol: Slip_1780
gene_biotype: protein_coding
description:
  Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680:IPR011059; KEGG: swo:Swol_1872 hypothetical protein; PFAM: amidohydrolase; SPTR: Q0AVT4 Putative uncharacterized protein; PFAM: Amidohydrolase family.


ensembl_gene_id: Slip_1781
symbol: Slip_1781
gene_biotype: protein_coding
description:
  Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR017926:IPR011697; KEGG: swo:Swol_1878 hypothetical protein; PFAM: peptidase C26; SPTR: Q0AVS8 Putative uncharacterized protein; PFAM: Peptidase C26.


ensembl_gene_id: Slip_1782
symbol: Slip_1782
gene_biotype: protein_coding
description:
  Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: Slip_1783
symbol: Slip_1783
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, CopG family; InterPro IPR002145; KEGG: pth:PTH_0737 hypothetical protein; PFAM: CopG domain protein DNA-binding domain protein; SPTR: A5D4B7 Putative uncharacterized protein; PFAM: Ribbon-helix-helix protein, copG family.


ensembl_gene_id: Slip_1784
symbol: Slip_1784
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Slip_1785
symbol: Slip_1785
gene_biotype: protein_coding
description:
  COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: swo:Swol_1883 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Q0AVS3 CBS domain containing membrane protein; PFAM: CBS domain.


ensembl_gene_id: Slip_1786
symbol: nnrE
gene_biotype: protein_coding
description:
  Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]


ensembl_gene_id: Slip_1787
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-acyl-carrier-protein synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: Slip_1789
symbol: Slip_1789
gene_biotype: protein_coding
description:
  CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: swo:Swol_1886 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Q0AVS0 CheW protein; PFAM: CheW-like domain.


ensembl_gene_id: Slip_1790
symbol: Slip_1790
gene_biotype: protein_coding
description:
  Quinone oxidoreductase, YhdH/YhfP family; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR013154:IPR013149:IPR016040:IPR011032:IPR 014188; KEGG: bph:Bphy_3172 quinone oxidoreductase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Q2BKL7 Putative zinc-binding alcohol dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family.


ensembl_gene_id: Slip_1791
symbol: Slip_1791
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0487 MaoC-like dehydratase; SPTR: Q0AZN2 MaoC-like dehydratase; PFAM: MaoC like domain.


ensembl_gene_id: Slip_1792
symbol: Slip_1792
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004090; KEGG: dsy:DSY0657 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Q24ZU6 Putative uncharacterized protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_1793
symbol: Slip_1793
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: cac:CAC3410 HD-GYP domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B7A5P3 Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_1795
symbol: Slip_1795
gene_biotype: protein_coding
description:
  Protein of unknown function DUF955; COGs: COG2856 Zn peptidase; InterPro IPR001387:IPR010359:IPR010982; KEGG: fre:Franean1_6282 helix-turn-helix domain-containing protein; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A8LEY4 Helix-turn-helix domain protein; PFAM: Helix-turn-helix; Domain of unknown function (DUF955).


ensembl_gene_id: Slip_1796
symbol: Slip_1796
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bcv:Bcav_4062 polysaccharide lyase 8 alpha-helical; SPTR: C5C5U5 Polysaccharide lyase 8 alpha-helical.


ensembl_gene_id: Slip_1797
symbol: Slip_1797
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR004107:IPR002104:IPR013762:IPR011010:IPR 010998; KEGG: drm:Dred_0788 phage integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: A4J2M3 Phage integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Slip_1798
symbol: Slip_1798
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR013838; KEGG: cyt:cce_0077 5-methyltetrahydrofolate--homocysteine methyltransferase; SPTR: C6M3A9 Putative cysteine-rich protein X.


ensembl_gene_id: Slip_1799
symbol: Slip_1799
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sdl:Sdel_1612 metallophosphoesterase; SPTR: D0N6B0 Crinkler (CRN) family protein.


ensembl_gene_id: Slip_1800
symbol: Slip_1800
gene_biotype: protein_coding
description:
  KEGG: bcr:BCAH187_D0014 hypothetical protein; SPTR: C2YKF2 Putative uncharacterized protein; PFAM: Zonular occludens toxin (Zot).


ensembl_gene_id: Slip_1805
symbol: Slip_1805
gene_biotype: protein_coding
description:
  COGs: COG3401 Fibronectin type 3 domain-containing protein; InterPro IPR003961:IPR008957; KEGG: cth:Cthe_1235 cellulose 1,4-beta-cellobiosidase; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: C0UCZ0 Fibronectin type III domain-containing protein; PFAM: Fibronectin type III domain.


ensembl_gene_id: Slip_1808
symbol: Slip_1808
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein similar to interspersed repeat antigen precursor; SPTR: Q25884 Interspersed repeat antigen (FIRA) gene. (Fragment).


ensembl_gene_id: Slip_1809
symbol: Slip_1809
gene_biotype: protein_coding
description:
  Fibronectin type III domain protein; InterPro IPR003961:IPR008957; KEGG: hypothetical protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: C3XYX8 Putative uncharacterized protein; PFAM: Fibronectin type III domain.


ensembl_gene_id: Slip_1810
symbol: Slip_1810
gene_biotype: protein_coding
description:
  COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: mta:Moth_1608 lytic transglycosylase, catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: Q2RI25 Lytic transglycosylase, catalytic; PFAM: Transglycosylase SLT domain.


ensembl_gene_id: Slip_1811
symbol: Slip_1811
gene_biotype: protein_coding
description:
  COGs: COG3401 Fibronectin type 3 domain-containing protein; InterPro IPR003961:IPR008957; KEGG: gur:Gura_2036 fibronectin, type III domain-containing protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: B9XEJ9 Fibronectin type III domain protein; PFAM: Fibronectin type III domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.


ensembl_gene_id: Slip_1812
symbol: Slip_1812
gene_biotype: protein_coding
description:
  COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: ckl:CKL_1337 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: A1HTS4 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Slip_1814
symbol: Slip_1814
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dge:Dgeo_1247 cytochrome c assembly protein; SPTR: Q1IYZ1 Cytochrome c assembly protein.


ensembl_gene_id: Slip_1816
symbol: Slip_1816
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: SLC25A18; solute carrier family 25 (mitochondrial carrier), member 18; SPTR: Q9H1K4 Mitochondrial glutamate carrier 2.


ensembl_gene_id: Slip_1820
symbol: Slip_1820
gene_biotype: protein_coding
description:
  AAA ATPase; COGs: COG1484 DNA replication protein; InterPro IPR003593; KEGG: bcr:BCAH187_A4023 hypothetical protein; SMART: AAA ATPase; SPTR: B7HM91 Putative prophage LambdaBa02, DNA replication protein DnaC; PFAM: IstB-like ATP binding protein.


ensembl_gene_id: Slip_1822
symbol: Mpp6
gene_biotype: protein_coding
description:
  Mpp6; KEGG: Mpp6; membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6); SPTR: B5DFE0 Mpp6 protein.


ensembl_gene_id: Slip_1823
symbol: Slip_1823
gene_biotype: protein_coding
description:
  KEGG: rde:RD1_1807 hypothetical protein; SPTR: A9YWY3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1052).


ensembl_gene_id: Slip_1824
symbol: Slip_1824
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afo:Afer_0830 glycosyl transferase group 1; SPTR: C7WQL7 Putative uncharacterized protein.


ensembl_gene_id: Slip_1825
symbol: Slip_1825
gene_biotype: protein_coding
description:
  D12 class N6 adenine-specific DNA methyltransferase; COGs: COG0338 Site-specific DNA methylase; InterPro IPR002294:IPR012327; KEGG: chl:Chy400_0079 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: B9LGD4 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.


ensembl_gene_id: Slip_1831
symbol: Slip_1831
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: GG22527 gene product from transcript GG22527-RA; SPTR: C4FSP7 Putative uncharacterized protein.


ensembl_gene_id: Slip_1835
symbol: Slip_1835
gene_biotype: protein_coding
description:
  InterPro IPR001387:IPR010982; KEGG: amt:Amet_2612 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A6TRE6 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.


ensembl_gene_id: Slip_1836
symbol: Slip_1836
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR001387:IPR010982; KEGG: tte:TTE2125 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q24LF3 RepR; putative repressor; PFAM: Helix-turn-helix.


ensembl_gene_id: Slip_1837
symbol: Slip_1837
gene_biotype: protein_coding
description:
  COGs: COG1787 endonuclease distantly related to Holliday junction resolvase and Mrr-like restriction enzyme; InterPro IPR007560; KEGG: pth:PTH_2103 endonuclease; PFAM: restriction endonuclease; SPTR: A5D0D3 Predicted endonuclease; PFAM: Restriction endonuclease.


ensembl_gene_id: Slip_1838
symbol: Slip_1838
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0150; InterPro IPR005357; KEGG: mta:Moth_0483 hypothetical protein; PFAM: protein of unknown function UPF0150; SPTR: Q2RL76 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0150).


ensembl_gene_id: Slip_1839
symbol: Slip_1839
gene_biotype: protein_coding
description:
  YcfA family protein; COGs: COG1724 periplasmic or secreted lipoprotein; InterPro IPR012933; KEGG: mta:Moth_0484 YcfA-like; PFAM: YcfA family protein; SPTR: Q2RL75 YcfA-like; PFAM: YcfA-like protein.


ensembl_gene_id: Slip_1841
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Slip_1842
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: Slip_1843
symbol: Slip_1843
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006674:IPR003607:IPR006675; KEGG: mta:Moth_0272 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q2RLT2 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_1844
symbol: Slip_1844
gene_biotype: protein_coding
description:
  PGAP1 family protein; COGs: COG1647 Esterase/lipase; InterPro IPR012354:IPR012908; KEGG: swo:Swol_0278 putative esterase/lipase; PFAM: PGAP1 family protein; SPTR: Q0B078 Putative esterase/lipase.


ensembl_gene_id: Slip_1845
symbol: hppA-2
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: Slip_1846
symbol: Slip_1846
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Slip_1847
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: Slip_1849
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: Slip_1850
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Slip_1851
symbol: pgk
gene_biotype: protein_coding
description:
  COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576:IPR015824:IPR015901:IPR015911; KEGG: swo:Swol_0273 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Q0B083 Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: Slip_1852
symbol: Slip_1852
gene_biotype: protein_coding
description:
  COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020831:IPR020832:IPR020828:IPR020829:IPR 016040:IPR020830:IPR006424; KEGG: mta:Moth_0262 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Q2RLU2 Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase [...]


ensembl_gene_id: Slip_1853
symbol: Slip_1853
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007324; KEGG: swo:Swol_0271 transcriptional regulator; PFAM: putative sugar-binding domain protein; SPTR: Q0B085 Transcriptional regulator; PFAM: HTH domain; Putative sugar-binding domain.


ensembl_gene_id: Slip_1854
symbol: Slip_1854
gene_biotype: protein_coding
description:
  COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: swo:Swol_0265 sigma-54 (RpoN); PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: Q0B091 Sigma-54 (RpoN); TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor.


ensembl_gene_id: Slip_1856
symbol: Slip_1856
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: Slip_1858
symbol: Slip_1858
gene_biotype: protein_coding
description:
  Bifunctional phosphoglucose/phosphomannose isomerase; COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR011857:IPR001347:IPR019490; KEGG: swo:Swol_0260 bifunctional phosphoglucose/phosphomannose isomerase; PFAM: Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase-like; sugar isomerase (SIS); PRIAM: Mannose-6-phosphate isomerase; SPTR: Q0B095 Mannose-6-phosphate isomerase / glucose-6-phosphate isomerase; TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; PFAM: Bacterial phospho-glucose isomerase C-terminal region; SIS domain; TIGRFAM: bifunctional phosphogl [...]


ensembl_gene_id: Slip_1859
symbol: Slip_1859
gene_biotype: protein_coding
description:
  ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: hor:Hore_16050 glucokinase; PFAM: ROK family protein; SPTR: B8CYI5 Glucokinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).


ensembl_gene_id: Slip_1860
symbol: Slip_1860
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR017900:IPR017896:IPR001450; KEGG: pth:PTH_2121 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A5D0B3 Uncharacterized Fe-S center protein; PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362).


ensembl_gene_id: Slip_1861
symbol: Slip_1861
gene_biotype: protein_coding
description:
  COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150:IPR006379:IPR013200; KEGG: adg:Adeg_1822 Cof-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: C9R9C9 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB.


ensembl_gene_id: Slip_1862
symbol: Slip_1862
gene_biotype: protein_coding
description:
  Membrane protein of unknown function; COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: swo:Swol_0255 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: Q0B099 Putative uncharacterized protein; PFAM: Membrane protein of unknown function.


ensembl_gene_id: Slip_1863
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Slip_1864
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Slip_1865
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: Slip_1867
symbol: Slip_1867
gene_biotype: protein_coding
description:
  PDZ/DHR/GLGF domain protein; InterPro IPR001478; KEGG: swo:Swol_0249 hypothetical protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Q0B0A4 Putative uncharacterized protein; PFAM: PDZ domain (Also known as DHR or GLGF).


ensembl_gene_id: Slip_1868
symbol: Slip_1868
gene_biotype: protein_coding
description:
  COGs: COG0793 Periplasmic protease; InterPro IPR004447:IPR001478:IPR005151; KEGG: swo:Swol_0248 C-terminal processing peptidase; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Q0B0A5 C-terminal processing peptidase-2. Serine peptidase. MEROPS family S41A; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.


ensembl_gene_id: Slip_1870
symbol: Slip_1870
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR011055:IPR016047; KEGG: swo:Swol_0247 peptidase M23B; PFAM: Peptidase M23; SPTR: Q0B0A6 Peptidase M23B; PFAM: Peptidase family M23.


ensembl_gene_id: Slip_1871
symbol: Slip_1871
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Slip_1872
symbol: ftsE
gene_biotype: protein_coding
description:
  Sigma 54 interacting domain protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: Slip_1873
symbol: Slip_1873
gene_biotype: protein_coding
description:
  Transketolase central region; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR009014:IPR015941:IPR005475:IPR005476; KEGG: swo:Swol_0244 transketolase-like protein; PFAM: Transketolase central region; Transketolase domain protein; SPTR: Q0B0A9 Transketolase subunit B; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.


ensembl_gene_id: Slip_1874
symbol: Slip_1874
gene_biotype: protein_coding
description:
  Transketolase domain protein; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR013838:IPR005474; KEGG: swo:Swol_0243 transketolase-like protein; PFAM: Transketolase domain protein; SPTR: Q0B0B0 Transketolase subunit A; PFAM: Transketolase, thiamine diphosphate binding domain.


ensembl_gene_id: Slip_1875
symbol: prfB
gene_biotype: protein_coding
description:
  Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Slip_1876
symbol: Slip_1876
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: swo:Swol_0240 hypothetical protein; PFAM: OmpA/MotB domain protein; SPTR: Q0B0B2 Putative uncharacterized protein; PFAM: OmpA family.


ensembl_gene_id: Slip_1877
symbol: Slip_1877
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR000540:IPR002898; KEGG: swo:Swol_0239 hypothetical protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q0B0B3 Putative uncharacterized protein; PFAM: MotA/TolQ/ExbB proton channel family.


ensembl_gene_id: Slip_1878
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: Slip_1879
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: Slip_1880
symbol: Slip_1880
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0236 hypothetical protein; SPTR: Q0B0B6 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Slip_1881
symbol: Slip_1881
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0234 hypothetical protein; SPTR: Q0B0B8 Putative uncharacterized protein; PFAM: FlgN protein.


ensembl_gene_id: Slip_1882
symbol: Slip_1882
gene_biotype: protein_coding
description:
  Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: swo:Swol_0232 flagellin-specific chaperone FliS-like protein; PFAM: flagellar protein FliS; SPTR: Q0B0C0 Flagellin-specific chaperone FliS-like protein; TIGRFAM: flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS.


ensembl_gene_id: Slip_1883
symbol: Slip_1883
gene_biotype: protein_coding
description:
  InterPro IPR005186; KEGG: swo:Swol_0233 hypothetical protein; PFAM: flagellar protein FlaG protein; SPTR: Q0B0B9 Putative uncharacterized protein; PFAM: FlaG protein.


ensembl_gene_id: Slip_1884
symbol: Slip_1884
gene_biotype: protein_coding
description:
  COGs: COG3678 P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein; InterPro IPR020365; KEGG: dau:Daud_1896 hypothetical protein; SPTR: B1I5U1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1759).


ensembl_gene_id: Slip_1886
symbol: Slip_1886
gene_biotype: protein_coding
description:
  KEGG: adg:Adeg_0262 PilT protein domain protein; SPTR: C9RB04 PilT protein domain protein; PFAM: PIN domain.


ensembl_gene_id: Slip_1889
symbol: Slip_1889
gene_biotype: protein_coding
description:
  InterPro IPR002934; KEGG: mta:Moth_2319 DNA polymerase, beta-like region; PFAM: DNA polymerase beta domain protein region; SPTR: Q2RG33 DNA polymerase, beta-like region; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Slip_1892
symbol: Slip_1892
gene_biotype: protein_coding
description:
  InterPro IPR010235; KEGG: hmo:HM1_0739 nucleotidyltransferase substrate-binding protein, putative; PFAM: Nucleotidyltransferase substrate binding protein HI0074; SPTR: B7AAJ7 Nucleotidyltransferase substrate binding protein, HI0074 family; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family.


ensembl_gene_id: Slip_1893
symbol: Slip_1893
gene_biotype: protein_coding
description:
  InterPro IPR002934; KEGG: rmr:Rmar_0551 DNA polymerase beta domain protein region; PFAM: DNA polymerase beta domain protein region; SPTR: Q24UR2 Putative uncharacterized protein; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Slip_1894
symbol: Slip_1894
gene_biotype: protein_coding
description:
  KEGG: rca:Rcas_1313 hypothetical protein; SPTR: Q1Q0L3 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1814).


ensembl_gene_id: Slip_1898
symbol: Slip_1898
gene_biotype: protein_coding
description:
  Flagellin domain protein; COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001029; KEGG: tte:TTE0499 flagellin-like protein; PFAM: flagellin domain protein; SPTR: Q8RCD3 Flagellin and related hook-associated proteins; PFAM: Bacterial flagellin C-terminal helical region.


ensembl_gene_id: Slip_1900
symbol: Slip_1900
gene_biotype: protein_coding
description:
  KEGG: bcj:BCAM1479 hypothetical protein; SPTR: C3CV28 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF488.


ensembl_gene_id: Slip_1901
symbol: Slip_1901
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1130; InterPro IPR010556; KEGG: aba:Acid345_0955 hypothetical protein; PFAM: protein of unknown function DUF1130; SPTR: Q1IT42 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF488.


ensembl_gene_id: Slip_1903
symbol: Slip_1903
gene_biotype: protein_coding
description:
  Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Slip_1904
symbol: Slip_1904
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Slip_1905
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: Slip_1906
symbol: fliW
gene_biotype: protein_coding
description:
  Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: Slip_1908
symbol: Slip_1908
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR012657; KEGG: hna:Hneap_1490 hypothetical protein; SPTR: Q64E33 Putative uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436.


ensembl_gene_id: Slip_1909
symbol: Slip_1909
gene_biotype: protein_coding
description:
  COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR013384:IPR001492; KEGG: chy:CHY_0972 flagellar hook-associated protein 3; PFAM: flagellin domain protein; SPTR: Q3ADG5 Flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; manually curated; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3.


ensembl_gene_id: Slip_1910
symbol: Slip_1910
gene_biotype: protein_coding
description:
  COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371:IPR001444:IPR010930; KEGG: swo:Swol_0192 flagellar hook-associated protein-like protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Q0B0G0 Flagellar hook-associated protein-like protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Slip_1911
symbol: Slip_1911
gene_biotype: protein_coding
description:
  FlgN family protein; InterPro IPR007809; KEGG: swo:Swol_0191 hypothetical protein; PFAM: FlgN family protein; SPTR: Q0B0G1 Putative uncharacterized protein; PFAM: FlgN protein.


ensembl_gene_id: Slip_1912
symbol: Slip_1912
gene_biotype: protein_coding
description:
  Anti-sigma-28 factor, FlgM; InterPro IPR007412; KEGG: swo:Swol_0190 putative anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor FlgM family protein; SPTR: Q0B0G2 Anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor, FlgM.


ensembl_gene_id: Slip_1914
symbol: Slip_1914
gene_biotype: protein_coding
description:
  COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: swo:Swol_0188 phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Q0B0G4 Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.


ensembl_gene_id: Slip_1915
symbol: Slip_1915
gene_biotype: protein_coding
description:
  COGs: COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); InterPro IPR014021:IPR001650; KEGG: mta:Moth_0224 DEAD/DEAH box helicase-like; SPTR: Q2RLY0 DEAD/DEAH box helicase-like.


ensembl_gene_id: Slip_1916
symbol: Slip_1916
gene_biotype: protein_coding
description:
  Protein of unknown function DUF192; COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: pth:PTH_1454 hypothetical protein; PFAM: protein of unknown function DUF192; SPTR: A5D292 Uncharacterized conserved protein; PFAM: Uncharacterized ACR, COG1430.


ensembl_gene_id: Slip_1917
symbol: Slip_1917
gene_biotype: protein_coding
description:
  Type II secretion system F domain protein; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: drm:Dred_2118 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: A4J6D2 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Slip_1918
symbol: Slip_1918
gene_biotype: protein_coding
description:
  Type II secretion system F domain protein; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: drm:Dred_2117 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: C0GKK7 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Slip_1919
symbol: Slip_1919
gene_biotype: protein_coding
description:
  Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR017975:IPR001482; KEGG: adg:Adeg_1041 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: A1HPR8 Type II secretion system protein E; PFAM: Type II/IV secretion system protein.


ensembl_gene_id: Slip_1920
symbol: Slip_1920
gene_biotype: protein_coding
description:
  Response regulator receiver protein; COGs: COG4963 Flp pilus assembly protein ATPase CpaE; InterPro IPR011006:IPR001789:IPR002586; KEGG: drm:Dred_2115 response regulator receiver protein; PFAM: response regulator receiver; Cobyrinic acid ac-diamide synthase; SMART: response regulator receiver; SPTR: A1HPR2 Response regulator receiver protein; PFAM: Response regulator receiver domain; CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_1921
symbol: Slip_1921
gene_biotype: protein_coding
description:
  COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR017592:IPR013974; KEGG: pth:PTH_1449 flp pilus assembly protein CpaB; PFAM: SAF domain protein; SPTR: A5D2B5 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.


ensembl_gene_id: Slip_1922
symbol: Slip_1922
gene_biotype: protein_coding
description:
  KEGG: adg:Adeg_1038 protein of unknown function DUF2134, membrane; SPTR: A1HPR7 Putative uncharacterized protein.


ensembl_gene_id: Slip_1923
symbol: Slip_1923
gene_biotype: protein_coding
description:
  TadE family protein; InterPro IPR012495; KEGG: pth:PTH_1447 flp pilus assembly protein TadG; PFAM: TadE family protein; SPTR: A5D2B3 Flp pilus assembly protein TadG; PFAM: TadE-like protein.


ensembl_gene_id: Slip_1924
symbol: Slip_1924
gene_biotype: protein_coding
description:
  Peptidase A24A prepilin type IV; InterPro IPR000045; KEGG: dde:Dde_2358 hypothetical protein; PFAM: peptidase A24A prepilin type IV; SPTR: Q30YU1 Membrane protein, putative; PFAM: Type IV leader peptidase family.


ensembl_gene_id: Slip_1925
symbol: Slip_1925
gene_biotype: protein_coding
description:
  Flp/Fap pilin component; InterPro IPR007047; KEGG: adg:Adeg_1035 Flp/Fap pilin component; PFAM: Flp/Fap pilin component; SPTR: C9RD41 Flp/Fap pilin component; PFAM: Flp/Fap pilin component.


ensembl_gene_id: Slip_1927
symbol: Slip_1927
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR011006:IPR011991:IPR000792:IPR001789; KEGG: swo:Swol_0186 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Q0B0G6 Response regulator receiver protein; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.


ensembl_gene_id: Slip_1929
symbol: Slip_1929
gene_biotype: protein_coding
description:
  Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR016055:IPR005844:IPR005845:IPR005846; KEGG: mta:Moth_0221 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; SPTR: Q2RLY3 Phosphoglucomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosph [...]


ensembl_gene_id: Slip_1930
symbol: Slip_1930
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; SPTR: A0EFE5 Chromosome undetermined scaffold_93, whole genome shotgun sequence.


ensembl_gene_id: Slip_1933
symbol: Slip_1933
gene_biotype: protein_coding
description:
  Regulatory protein DeoR; COGs: COG0358 DNA primase; InterPro IPR001034; KEGG: mpd:MCP_2164 hypothetical protein; PFAM: regulatory protein DeoR; SPTR: C6Q3R5 Helix-turn-helix type 11 domain protein; PFAM: HTH domain.


ensembl_gene_id: Slip_1934
symbol: Slip_1934
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bfs:BF4169 putative TonB-linked outer membrane protein; SPTR: C6Q3G3 Putative uncharacterized protein; PFAM: Polypeptide deformylase.


ensembl_gene_id: Slip_1936
symbol: Slip_1936
gene_biotype: protein_coding
description:
  KEGG: rer:RER_03670 AraC family transcriptional regulator; SPTR: C6Q3R6 Putative uncharacterized protein.


ensembl_gene_id: Slip_1938
symbol: Slip_1938
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: CSPP1; centrosome and spindle pole associated protein 1; SPTR: B4BAM4 Putative uncharacterized protein.


ensembl_gene_id: Slip_1942
symbol: Slip_1942
gene_biotype: protein_coding
description:
  Copper amine oxidase domain protein; COGs: COG3858 glycosyl hydrolase; InterProIPR017853:IPR012854:IPR013781:IPR011583:IPR 001223; KEGG: dae:Dtox_1598 copper amine oxidase domain protein; PFAM: copper amine oxidase domain protein; glycoside hydrolase family 18; SMART: chitinase II; SPTR: C7HHF7 Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18.


ensembl_gene_id: Slip_1944
symbol: Slip_1944
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; InterPro IPR009061:IPR000551; KEGG: dae:Dtox_2781 resolvase domain protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C8W5E2 Resolvase domain protein; PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Slip_1945
symbol: Slip_1945
gene_biotype: protein_coding
description:
  DNA-cytosine methyltransferase; COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525:IPR018117; KEGG: swi:Swit_2535 DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; SPTR: A5V9C8 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm).


ensembl_gene_id: Slip_1947
symbol: Slip_1947
gene_biotype: protein_coding
description:
  HhH-GPD family protein; COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR011257:IPR004036:IPR003265:IPR003651; KEGG: pai:PAE3199 U/G & T/G mismatch specific glycosylase (PA-MIG); PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; SPTR: Q9P9L6 U/G & T/G mismatch specific glycosylase (Pa-MIG); PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif.


ensembl_gene_id: Slip_1949
symbol: Slip_1949
gene_biotype: protein_coding
description:
  Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR006118:IPR011109; KEGG: aac:Aaci_0463 resolvase domain protein; PFAM: Resolvase domain; Recombinase; SPTR: B4BAM6 Resolvase domain; PFAM: Recombinase; Resolvase, N terminal domain.


ensembl_gene_id: Slip_1950
symbol: Slip_1950
gene_biotype: protein_coding
description:
  Protein of unknown function DUF421; COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: mta:Moth_0220 hypothetical protein; PFAM: protein of unknown function DUF421; SPTR: Q2RLY4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF421).


ensembl_gene_id: Slip_1951
symbol: Slip_1951
gene_biotype: protein_coding
description:
  COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: swo:Swol_0184 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: Q0B0G8 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: Slip_1952
symbol: Slip_1952
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR009002:IPR016059; KEGG: swo:Swol_0183 hypothetical protein; SPTR: Q0B0G9 Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Slip_1953
symbol: Slip_1953
gene_biotype: protein_coding
description:
  Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR011004:IPR005835:IPR001451; KEGG: swo:Swol_2137 mannose-1-phosphate guanyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; SPTR: Q0AV26 Mannose-1-phosphate guanyltransferase; PFAM: Nucleotidyl transferase.


ensembl_gene_id: Slip_1955
symbol: Slip_1955
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterProIPR011075:IPR009057:IPR012287:IPR015893:IPR 001647; KEGG: swo:Swol_0177 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q0B0H5 Putative transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region.


ensembl_gene_id: Slip_1956
symbol: Slip_1956
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: swo:Swol_0176 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Q0B0H6 Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Slip_1957
symbol: Slip_1957
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR000089; KEGG: swo:Swol_0175 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: Q0B0H7 Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Slip_1958
symbol: Slip_1958
gene_biotype: protein_coding
description:
  COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: pth:PTH_2789 outer membrane protein; PFAM: outer membrane efflux protein; SPTR: A5CYF3 Outer membrane protein; PFAM: Outer membrane efflux protein.


ensembl_gene_id: Slip_1959
symbol: Slip_1959
gene_biotype: protein_coding
description:
  Appr-1-p processing domain protein; InterPro IPR002589; KEGG: gka:GK3117 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: Q5KV84 Hypothetical conserved protein; PFAM: Macro domain.


ensembl_gene_id: Slip_1964
symbol: Slip_1964
gene_biotype: protein_coding
description:
  InterPro IPR012854; KEGG: mta:Moth_2343 copper amine oxidase-like; PFAM: copper amine oxidase domain protein; SPTR: Q2RG10 Copper amine oxidase-like; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_1965
symbol: Slip_1965
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR013325:IPR013324:IPR000838:IPR 007627:IPR013249; KEGG: swo:Swol_0132 ECF subfamily RNA polymerase sigma-24 factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Q0B0L7 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Slip_1967
symbol: Slip_1967
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor); SPTR: Q2RFZ4 Putative transmembrane transcriptional regulator (Anti-sigma factor); PFAM: Anti-sigma-K factor rskA.


ensembl_gene_id: Slip_1968
symbol: Slip_1968
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0150; InterPro IPR005357; KEGG: pth:PTH_0968 hypothetical protein; PFAM: protein of unknown function UPF0150; SPTR: A5D3P4 Uncharacterized conserved protein; PFAM: Uncharacterised protein family (UPF0150).


ensembl_gene_id: Slip_1972
symbol: Slip_1972
gene_biotype: protein_coding
description:
  KEGG: mpl:Mpal_2053 hypothetical protein; SPTR: Q64DL3 Putative uncharacterized protein; PFAM: HEPN domain.


ensembl_gene_id: Slip_1973
symbol: Slip_1973
gene_biotype: protein_coding
description:
  Protein of unknown function DUF955; COGs: COG2856 Zn peptidase; InterPro IPR010359; KEGG: mta:Moth_0297 hypothetical protein; PFAM: protein of unknown function DUF955; SPTR: Q2RLQ8 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955).


ensembl_gene_id: Slip_1974
symbol: Slip_1974
gene_biotype: protein_coding
description:
  KEGG: hla:Hlac_3235 hypothetical protein; SPTR: B9LVQ3 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Slip_1975
symbol: Slip_1975
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR010998:IPR013762:IPR002104; KEGG: ate:Athe_2026 integrase family protein; PFAM: integrase family protein; SPTR: B9MLB3 Integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Slip_1976
symbol: Slip_1976
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: pth:PTH_2199 ATPase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A5D036 ATPase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_1978
symbol: Slip_1978
gene_biotype: protein_coding
description:
  InterPro IPR002934; KEGG: rrs:RoseRS_4091 DNA polymerase beta subunit; PFAM: DNA polymerase beta domain protein region; SPTR: A5V0N2 DNA polymerase, beta domain protein region; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Slip_1979
symbol: Slip_1979
gene_biotype: protein_coding
description:
  HEPN domain protein; COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN; InterPro IPR007842; KEGG: adg:Adeg_0040 HEPN domain protein; PFAM: HEPN domain protein; SMART: HEPN domain protein; SPTR: C9RAA8 HEPN domain protein; PFAM: HEPN domain.


ensembl_gene_id: Slip_1980
symbol: Slip_1980
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: Slip_1981
symbol: Slip_1981
gene_biotype: protein_coding
description:
  L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: sfu:Sfum_1527 alpha-methylacyl-CoA racemase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: A0LIG3 Alpha-methylacyl-CoA racemase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.


ensembl_gene_id: Slip_1982
symbol: Slip_1982
gene_biotype: protein_coding
description:
  Glutaconate CoA-transferase; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165; KEGG: sfu:Sfum_0809 glutaconate CoA-transferase; PFAM: coenzyme A transferase; PRIAM: Glutaconate CoA-transferase; SPTR: A0LGF5 Glutaconate CoA-transferase; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1983
symbol: Slip_1983
gene_biotype: protein_coding
description:
  Coenzyme A transferase; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165; KEGG: dhd:Dhaf_2696 glutaconate CoA-transferase; PFAM: coenzyme A transferase; SPTR: Q24X84 Putative uncharacterized protein; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_1985
symbol: Slip_1985
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: drm:Dred_1491 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A4J4L8 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_1986
symbol: Slip_1986
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR013786:IPR006091:IPR 013764:IPR006089:IPR006092:IPR006090; KEGG: gyc:GYMC61_2106 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q5L0D5 Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_1987
symbol: Slip_1987
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: rxy:Rxyl_1736 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C4D646 Putative uncharacterized protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Slip_1988
symbol: Slip_1988
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: gme:Gmet_2268 thiolase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q39TD0 Thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_1990
symbol: Slip_1990
gene_biotype: protein_coding
description:
  Sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR009057:IPR002078:IPR003593:IPR020441:IPR 002197; KEGG: swo:Swol_0437 hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Q0AZS9 Putative uncharacterized protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: Slip_1992
symbol: Slip_1992
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: ate:Athe_2185 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B9MM37 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_1993
symbol: Slip_1993
gene_biotype: protein_coding
description:
  KEGG: dau:Daud_1724 hypothetical protein; SPTR: B1I5C5 Putative uncharacterized protein; PFAM: LexA DNA binding domain.


ensembl_gene_id: Slip_1995
symbol: Slip_1995
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: sfu:Sfum_0232 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A0LET1 Uncharacterized domain 1; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD.


ensembl_gene_id: Slip_1996
symbol: Slip_1996
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0150; COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: pth:PTH_2206 hypothetical protein; PFAM: protein of unknown function UPF0150; SPTR: A5D043 Uncharacterized conserved protein; PFAM: Uncharacterised protein family (UPF0150).


ensembl_gene_id: Slip_1997
symbol: Slip_1997
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR009057:IPR012287:IPR001647; KEGG: swo:Swol_0026 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q0B0W9 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Slip_1998
symbol: Slip_1998
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: swo:Swol_0025 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: Q0B0X0 Uncharacterized aromatic compound catabolism-like protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Slip_2001
symbol: Slip_2001
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: cth:Cthe_0129 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B4BA01 Diguanylate cyclase and metal dependent phosphohydrolase; PFAM: HD domain.


ensembl_gene_id: Slip_2003
symbol: Slip_2003
gene_biotype: protein_coding
description:
  Nucleotide-binding protein, PIN domain protein; COGs: COG5378 nucleotide-binding protein; InterPro IPR002850:IPR006596:IPR002716:IPR019298; KEGG: dau:Daud_0319 PilT domain-containing protein; PFAM: Nucleotide-binding protein, PIN domain; PilT protein domain protein; SMART: Nucleotide binding protein PINc; SPTR: B1I0W5 PilT protein domain protein; PFAM: Predicted nucleotide-binding protein, containing PIN domain; TIGRFAM: conserved hypothetical protein TIGR00305.


ensembl_gene_id: Slip_2005
symbol: Slip_2005
gene_biotype: protein_coding
description:
  Dynamin family protein; InterPro IPR001401; KEGG: sfu:Sfum_2910 dynamin family protein; PFAM: Dynamin family protein; SPTR: A0LMD5 Dynamin family protein; PFAM: Dynamin family.


ensembl_gene_id: Slip_2006
symbol: Slip_2006
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR013762:IPR002104; KEGG: drm:Dred_2783 phage integrase family protein; PFAM: integrase family protein; SPTR: A4J884 Phage integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Slip_2008
symbol: Slip_2008
gene_biotype: protein_coding
description:
  D12 class N6 adenine-specific DNA methyltransferase; COGs: COG0338 Site-specific DNA methylase; InterPro IPR002294:IPR012327; KEGG: chl:Chy400_0079 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: Q4A558 Putative uncharacterized protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase.


ensembl_gene_id: Slip_2009
symbol: Slip_2009
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cla:Cla_1442 NADH-quinone oxidoreductase, D subunit; SPTR: B9KDW9 NADH-quinone oxidoreductase, D subunit.


ensembl_gene_id: Slip_2010
symbol: Slip_2010
gene_biotype: protein_coding
description:
  COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: drm:Dred_2549 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: A4J7K6 UPF0758 protein Dred_2549; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; Belongs to the UPF0758 family.


ensembl_gene_id: Slip_2011
symbol: Slip_2011
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1738; COGs: COG4227 Antirestriction protein; InterPro IPR017113:IPR013610; KEGG: dae:Dtox_2455 domain of unknown function DUF1738; PFAM: domain of unknown function DUF1738; SPTR: C3CUG2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1738).


ensembl_gene_id: Slip_2012
symbol: Slip_2012
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2442; InterPro IPR018841; KEGG: mta:Moth_0363 molybdopterin-guanine dinucleotide biosynthesis protein A-like; PFAM: Protein of unknown function DUF2442; SPTR: Q2RLJ2 Molybdopterin-guanine dinucleotide biosynthesis protein A-like; PFAM: Protein of unknown function (DUF2442).


ensembl_gene_id: Slip_2014
symbol: Slip_2014
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mmy:MSC_0984 UDP-galactopyranose mutase; SPTR: A3IAL0 Putative uncharacterized protein.


ensembl_gene_id: Slip_2019
symbol: Slip_2019
gene_biotype: protein_coding
description:
  COGs: COG0539 Ribosomal protein S1; InterPro IPR016027:IPR003029; KEGG: pth:PTH_2479 RNA-binding protein; SPTR: A5CZC9 Hypothetical RNA-binding protein.


ensembl_gene_id: Slip_2021
symbol: Slip_2021
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR000641:IPR003959; KEGG: pth:PTH_2484 hypothetical protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A5CZD4 Putative uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA).


ensembl_gene_id: Slip_2022
symbol: Slip_2022
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; K07752 carboxypeptidase D; SPTR: C3YY10 Putative uncharacterized protein.


ensembl_gene_id: Slip_2023
symbol: Slip_2023
gene_biotype: protein_coding
description:
  InterPro IPR007404; KEGG: drm:Dred_0844 membrane-bound metal-dependent hydrolase; PFAM: membrane-bound metal-dependent hydrolase; SPTR: A4J2S9 Membrane-bound metal-dependent hydrolase; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457).


ensembl_gene_id: Slip_2024
symbol: Slip_2024
gene_biotype: protein_coding
description:
  TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR007121:IPR003688; KEGG: pth:PTH_2488 type IV secretory pathway, VirD4 components; PFAM: TRAG family protein; SPTR: A5CZ99 Type IV secretory pathway, VirD4 components; PFAM: TraG/TraD family.


ensembl_gene_id: Slip_2027
symbol: Slip_2027
gene_biotype: protein_coding
description:
  KEGG: adg:Adeg_2167 CopG domain protein DNA-binding domain protein; SPTR: C9RDH3 CopG domain protein DNA-binding domain protein.


ensembl_gene_id: Slip_2028
symbol: Slip_2028
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cte:CT2206 polysaccharide efflux transporter, putative; SPTR: A8SN41 Putative uncharacterized protein.


ensembl_gene_id: Slip_2029
symbol: Slip_2029
gene_biotype: protein_coding
description:
  KEGG: HS90_PODAN HEAT SHOCK PROTEIN 90 HOMOLOG (SUPPRESSOR OF VEGETATIVE INCOMPATIBILITY MOD-E); K04079 molecular chaperone HtpG; SPTR: Q5ATW1 HS90_PODAN HEAT SHOCK PROTEIN 90 HOMOLOG (SUPPRESSOR OF VEGETATIVE INCOMPATIBILITY MOD-E).


ensembl_gene_id: Slip_2031
symbol: Slip_2031
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006675:IPR003607:IPR006674; KEGG: dau:Daud_1844 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B1I5M4 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_2032
symbol: Slip_2032
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: AGAP011961-PA; K06628 cell division control protein 45; SPTR: Q7PZK7 AGAP011961-PA.


ensembl_gene_id: Slip_2033
symbol: Slip_2033
gene_biotype: protein_coding
description:
  KEGG: adg:Adeg_0758 hypothetical protein; SPTR: C9RCC6 Putative uncharacterized protein; PFAM: CARDB.


ensembl_gene_id: Slip_2034
symbol: Slip_2034
gene_biotype: protein_coding
description:
  InterPro IPR012854; KEGG: cth:Cthe_3188 copper amine oxidase-like protein; PFAM: copper amine oxidase domain protein; SPTR: A3DKA4 Copper amine oxidase-like protein; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_2036
symbol: Slip_2036
gene_biotype: protein_coding
description:
  KEGG: rfr:Rfer_2305 hypothetical protein; SPTR: Q21W30 Conserved hypothetical transmembrane protein.


ensembl_gene_id: Slip_2037
symbol: Slip_2037
gene_biotype: protein_coding
description:
  COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR010992:IPR000119; KEGG: lsl:LSL_1774 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Q1WRB9 DNA-binding protein HU; PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Slip_2041
symbol: Slip_2041
gene_biotype: protein_coding
description:
  DnaB domain protein helicase domain protein; COGs: COG0358 DNA primase; InterProIPR002694:IPR006154:IPR007694:IPR013264:IPR 006171; KEGG: sal:Sala_0980 DNA primase; PFAM: DnaB domain protein helicase domain protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; SPTR: A3YYA9 DNA primase; PFAM: Toprim domain; CHC2 zinc finger; DnaB-like helicase C terminal domain; TIGRFAM: DNA primase, catalytic core.


ensembl_gene_id: Slip_2043
symbol: Slip_2043
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sma:SAV_4526 tryptophan 2,3-dioxygenase; SPTR: Q82ET7 Putative tryptophan 2,3-dioxygenase.


ensembl_gene_id: Slip_2044
symbol: Slip_2044
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR010982:IPR001387; KEGG: cro:ROD_26202 putative prophage DNA binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B4VBR0 DNA-binding protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Slip_2045
symbol: Slip_2045
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aba:Acid345_3755 HsdR family type I site-specific deoxyribonuclease; SPTR: Q1IK45 Type I site-specific deoxyribonuclease, HsdR family.


ensembl_gene_id: Slip_2046
symbol: Slip_2046
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR011010:IPR010998:IPR013762:IPR004107:IPR 002104; KEGG: dau:Daud_0795 phage integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: B1I2U5 Phage integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Slip_2048
symbol: Slip_2048
gene_biotype: protein_coding
description:
  Phosphodiesterase, MJ0936 family; COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: swo:Swol_0455 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Q0AZR4 Putative uncharacterized protein; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family.


ensembl_gene_id: Slip_2049
symbol: Slip_2049
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Slip_2050
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: Slip_2051
symbol: Slip_2051
gene_biotype: protein_coding
description:
  Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: chy:CHY_1374 fumarate hydratase, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: Q3ACC8 Fumarate hydratase, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region.


ensembl_gene_id: Slip_2052
symbol: Slip_2052
gene_biotype: protein_coding
description:
  Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: chy:CHY_1375 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; SPTR: C7IDB2 Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region.


ensembl_gene_id: Slip_2053
symbol: Slip_2053
gene_biotype: protein_coding
description:
  Beta-lactamase domain-containing protein; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: dau:Daud_1506 beta-lactamase domain-containing protein; SPTR: B1I4X0 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_2054
symbol: Slip_2054
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: swo:Swol_0452 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: Q0AZR7 Putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: Slip_2055
symbol: Slip_2055
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: swo:Swol_0450 hypothetical protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: Q0AZR8 Putative uncharacterized protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Slip_2057
symbol: Slip_2057
gene_biotype: protein_coding
description:
  Lipoprotein LpqB, GerMN domain protein; InterPro IPR019606; KEGG: swo:Swol_0447 putative germination protein GerM; PFAM: Lipoprotein LpqB, GerMN domain; SPTR: Q0AZS0 Putative germination protein GerM; PFAM: Sporulation and spore germination.


ensembl_gene_id: Slip_2059
symbol: Slip_2059
gene_biotype: protein_coding
description:
  COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR003593; KEGG: swo:Swol_0445 magnesium chelatase; PRIAM: Magnesium chelatase; SMART: AAA ATPase; SPTR: Q0AZS2 Magnesium chelatase.


ensembl_gene_id: Slip_2060
symbol: Slip_2060
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pcr:Pcryo_2011 potassium efflux system protein; SPTR: Q4FQY1 Glutathione-regulated K+ efflux antiporter, CPA2 family.


ensembl_gene_id: Slip_2061
symbol: Slip_2061
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR011006:IPR001789:IPR007492; KEGG: swo:Swol_0444 response regulator receiver protein; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Q0AZS3 Response regulator receiver protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.


ensembl_gene_id: Slip_2062
symbol: Slip_2062
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: swo:Swol_1215 isochorismatase family protein; PFAM: isochorismatase hydrolase; SPTR: Q0AXN0 Isochorismatase family protein; PFAM: Isochorismatase family.


ensembl_gene_id: Slip_2063
symbol: Slip_2063
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: swo:Swol_0443 oxygen-independent coproporphyrinogen III oxidase, putative; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AZS4 Oxygen-independent coproporphyrinogen III oxidase, putative; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_2064
symbol: Slip_2064
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase/NADH oxidase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR013785:IPR013027:IPR000103:IPR001155; KEGG: drm:Dred_2421 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A4J778 NADH:flavin oxidoreductase/NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.


ensembl_gene_id: Slip_2065
symbol: Slip_2065
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1285; COGs: COG3816 conserved hypothetical protein; InterPro IPR010707; KEGG: swo:Swol_0441 hypothetical protein; PFAM: protein of unknown function DUF1285; SPTR: Q0AZS6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1285).


ensembl_gene_id: Slip_2067
symbol: Slip_2067
gene_biotype: protein_coding
description:
  Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterProIPR015424:IPR016040:IPR015421:IPR005814:IPR 006151; KEGG: swo:Swol_0440 putative class-III aminotransferase; PFAM: aminotransferase class-III; Shikimate/quinate 5-dehydrogenase; SPTR: Q0AZS7 Aminotransferase; PFAM: Aminotransferase class-III.


ensembl_gene_id: Slip_2069
symbol: Slip_2069
gene_biotype: protein_coding
description:
  Oxidoreductase FAD/NAD(P)-binding domain protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017938:IPR017927:IPR012165:IPR008333:IPR 001433:IPR019480; KEGG: swo:Swol_0402 oxidoreductase FAD/NAD(P)-binding; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Q0AZW4 Oxidoreductase FAD/NAD(P)-binding; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotat [...]


ensembl_gene_id: Slip_2070
symbol: Slip_2070
gene_biotype: protein_coding
description:
  InterPro IPR009051:IPR017900:IPR017896; KEGG: swo:Swol_0401 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: Q0AZW5 4Fe-4S ferredoxin, iron-sulfur binding.


ensembl_gene_id: Slip_2071
symbol: Slip_2071
gene_biotype: protein_coding
description:
  Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; InterProIPR009051:IPR017900:IPR017896:IPR007525:IPR 001450; KEGG: swo:Swol_0400 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AZW6 4Fe-4S ferredoxin, iron-sulfur binding.


ensembl_gene_id: Slip_2072
symbol: Slip_2072
gene_biotype: protein_coding
description:
  COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; Contains selenocysteine; InterPro IPR003813; KEGG: chy:CHY_0931 hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing; PFAM: methyl-viologen-reducing hydrogenase delta subunit; SPTR: Q3ADK6 Hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing; manually curated; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.


ensembl_gene_id: Slip_2073
symbol: Slip_2073
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; Contains selenocysteine; InterProIPR016040:IPR017900:IPR017896:IPR006076:IPR 001450; KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; SPTR: Q3ADK7 Heterodisulfide reductase, subunit A, selenocysteine-containing; manually curated; PFAM: FAD binding domain; 4Fe-4S binding domain.


ensembl_gene_id: Slip_2074
symbol: Slip_2074
gene_biotype: protein_coding
description:
  COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: swo:Swol_0395 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: Q0AZX1 Succinate dehydrogenase subunit C; PFAM: Cysteine-rich domain.


ensembl_gene_id: Slip_2075
symbol: Slip_2075
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin, iron-sulfur binding protein; COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR009051:IPR012285:IPR017900:IPR017896; KEGG: swo:Swol_0394 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: Q0AZX2 4Fe-4S ferredoxin, iron-sulfur binding.


ensembl_gene_id: Slip_2076
symbol: Slip_2076
gene_biotype: protein_coding
description:
  COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR006004:IPR009051:IPR012285:IPR013027; KEGG: mta:Moth_1517 putative oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q2RIB3 Sulfide dehydrogenase (Flavoprotein) subunit SudA; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric.


ensembl_gene_id: Slip_2077
symbol: Slip_2077
gene_biotype: protein_coding
description:
  Oxidoreductase FAD/NAD(P)-binding domain protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017938:IPR017927:IPR012165:IPR008333:IPR 001433:IPR019480; KEGG: mta:Moth_1518 ferredoxin-NADP(+) reductase subunit alpha; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Q2RIB2 Sulfide dehydrogenase (Flavoprotein) subunit SudB; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster bindin [...]


ensembl_gene_id: Slip_2079
symbol: Slip_2079
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; InterPro IPR017900:IPR017896:IPR001450; KEGG: swo:Swol_2105 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AV57 Ferredoxin; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Slip_2080
symbol: Slip_2080
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR009057:IPR002078:IPR003593:IPR 020441:IPR003018:IPR013767:IPR002197; KEGG: gyc:GYMC61_1516 GAF modulated sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: C6QLE9 GAF modulated sigma54 specific transcriptional r [...]


ensembl_gene_id: Slip_2081
symbol: Slip_2081
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rrs:RoseRS_0659 TPR repeat-containing protein; SPTR: A5UR25 Tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Slip_2082
symbol: Slip_2082
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR005829:IPR011701; KEGG: sus:Acid_4563 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A1HRB5 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Slip_2083
symbol: Slip_2083
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR013786:IPR006091:IPR 013764:IPR006089:IPR006092:IPR006090; KEGG: chy:CHY_1732 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q3ABD2 Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_2084
symbol: Slip_2084
gene_biotype: protein_coding
description:
  L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: tai:Taci_0409 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: A1HP23 Formyl-CoA transferase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.


ensembl_gene_id: Slip_2085
symbol: Slip_2085
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: dhd:Dhaf_0602 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: B8FV22 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_2086
symbol: Slip_2086
gene_biotype: protein_coding
description:
  Integrase catalytic region; InterPro IPR012337:IPR009057:IPR001584; KEGG: saf:SULAZ_1706 putative transposase; PFAM: Integrase catalytic region; SPTR: B7AC35 Integrase catalytic region; PFAM: Integrase core domain.


ensembl_gene_id: Slip_2087
symbol: Slip_2087
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002347:IPR002198; KEGG: gwc:GWCH70_0926 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C5D808 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.


ensembl_gene_id: Slip_2088
symbol: Slip_2088
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR013328:IPR006176:IPR 006108; KEGG: gtn:GTNG_3340 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: C8S9X2 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Slip_2089
symbol: Slip_2089
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: tte:TTE0544 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Q8RC92 Enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_2090
symbol: Slip_2090
gene_biotype: protein_coding
description:
  MaoC domain protein dehydratase; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: swo:Swol_1356 (de)hydratase; PFAM: MaoC domain protein dehydratase; SPTR: Q0AX90 (De)hydratase mit MaoC domain; PFAM: MaoC like domain.


ensembl_gene_id: Slip_2091
symbol: Slip_2091
gene_biotype: protein_coding
description:
  UspA domain protein; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR014729:IPR006015:IPR006016; KEGG: dae:Dtox_0982 UspA domain protein; PFAM: UspA domain protein; SPTR: C8W3A4 UspA domain protein; PFAM: Universal stress protein family.


ensembl_gene_id: Slip_2092
symbol: Slip_2092
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: cbe:Cbei_1391 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: C6PFC4 Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_2093
symbol: Slip_2093
gene_biotype: protein_coding
description:
  COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: swo:Swol_0445 magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: Q0AZS2 Magnesium chelatase; PFAM: MCM2/3/5 family.


ensembl_gene_id: Slip_2094
symbol: Slip_2094
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ttu:TERTU_2994 cytochrome c oxidase, Cbb3-type, subunit III; SPTR: C5BNJ8 Cytochrome c oxidase, Cbb3-type, subunit III.


ensembl_gene_id: Slip_2095
symbol: Slip_2095
gene_biotype: protein_coding
description:
  KEGG: kol:Kole_0767 transposase IS3/IS911 family protein; SPTR: C5CG38 Transposase IS3/IS911 family protein.


ensembl_gene_id: Slip_2097
symbol: Slip_2097
gene_biotype: protein_coding
description:
  Ferredoxin; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR001041:IPR017900:IPR000283:IPR017896:IPR 001450; KEGG: swo:Swol_1700 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AWA6 2Fe-2S iron-sulfur cluster domain with dehydrogenase; PFAM: 2Fe-2S iron-sulfur cluster binding domain.


ensembl_gene_id: Slip_2098
symbol: Slip_2098
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR012336:IPR012335:IPR017900:IPR001949:IPR 017896:IPR011538:IPR019554:IPR019575:IPR001450; KEGG: swo:Swol_1701 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: Q0AWA5 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F ir [...]


ensembl_gene_id: Slip_2099
symbol: Slip_2099
gene_biotype: protein_coding
description:
  COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR012336:IPR002023; KEGG: swo:Swol_1702 NADH:ubiquinone oxidoreductase 24 kD subunit NuoE; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: Q0AWA4 NADH:ubiquinone oxidoreductase 24 kD subunit NuoE; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.


ensembl_gene_id: Slip_2100
symbol: Slip_2100
gene_biotype: protein_coding
description:
  MoaD family protein; InterPro IPR010038:IPR016155:IPR012675:IPR003749; KEGG: tai:Taci_0475 MoaD family protein; PFAM: thiamineS protein; SPTR: D1B8V8 MoaD family protein; TIGRFAM: MoaD family protein; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal.


ensembl_gene_id: Slip_2101
symbol: Slip_2101
gene_biotype: protein_coding
description:
  COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR001203:IPR013983:IPR013985; KEGG: swo:Swol_1703 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: Q0AWA3 Aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3.


ensembl_gene_id: Slip_2102
symbol: Slip_2102
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterPro IPR017900:IPR017896:IPR001450; KEGG: swo:Swol_1704 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AWA2 4Fe-4S ferredoxin, iron-sulfur binding.


ensembl_gene_id: Slip_2105
symbol: Slip_2105
gene_biotype: protein_coding
description:
  COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: amt:Amet_3623 adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; PRIAM: Adenosylcobinamide-phosphate guanylyltransferase; SPTR: A6TU77 Adenosylcobinamide-phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase.


ensembl_gene_id: Slip_2106
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: Slip_2107
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: Slip_2109
symbol: Slip_2109
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR013786:IPR006091:IPR 013764:IPR006089:IPR006092:IPR006090; KEGG: dal:Dalk_3350 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; PRIAM: Butyryl-CoA dehydrogenase; SPTR: B8FJB2 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_2110
symbol: Slip_2110
gene_biotype: protein_coding
description:
  COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014729:IPR012255:IPR014730; KEGG: tye:THEYE_A1636 electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: A1HPI5 Electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein domain.


ensembl_gene_id: Slip_2111
symbol: Slip_2111
gene_biotype: protein_coding
description:
  COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterProIPR014729:IPR017900:IPR018206:IPR017896:IPR 001450:IPR014730:IPR014731; KEGG: nth:Nther_1879 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Electron transfer flavoprotein alpha subunit; SPTR: A1HPI6 Electron transfer flavoprotein, alpha subunit; PFAM: 4Fe-4S binding domain; Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: Slip_2112
symbol: Slip_2112
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: dal:Dalk_3864 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8FCD2 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Slip_2113
symbol: Slip_2113
gene_biotype: protein_coding
description:
  InterPro IPR009002:IPR011576; KEGG: dae:Dtox_2749 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C8W1Q6 Pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Slip_2114
symbol: Slip_2114
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: electron transporter, putative; SPTR: B9ST47 Electron transporter, putative.


ensembl_gene_id: Slip_2116
symbol: Slip_2116
gene_biotype: protein_coding
description:
  SEC-C motif domain protein; InterPro IPR004027; KEGG: aac:Aaci_1543 hypothetical protein; PFAM: SEC-C motif domain protein; SPTR: C6J7P4 Putative uncharacterized protein; PFAM: SEC-C motif.


ensembl_gene_id: Slip_2118
symbol: Slip_2118
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR011322:IPR015867:IPR017918:IPR002187; KEGG: aae:aq_109 nitrogen regulatory PII protein; PFAM: nitrogen regulatory protein P-II; SPTR: O66513 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Slip_2119
symbol: Slip_2119
gene_biotype: protein_coding
description:
  Ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR018047:IPR002229; KEGG: afu:AF1746 ammonium transporter (amt-2); PFAM: ammonium transporter; SPTR: O28528 Ammonium transporter (Amt-2); TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.


ensembl_gene_id: Slip_2120
symbol: Slip_2120
gene_biotype: protein_coding
description:
  COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR017926:IPR000991; KEGG: adg:Adeg_1887 glutamine amidotransferase class-I; PFAM: glutamine amidotransferase class-I; SPTR: C9R9I8 Glutamine amidotransferase class-I; PFAM: Glutamine amidotransferase class-I.


ensembl_gene_id: Slip_2121
symbol: Slip_2121
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: dae:Dtox_3446 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C8W6R0 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_2122
symbol: Slip_2122
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Slip_2123
symbol: Slip_2123
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter, periplasmic molybdate-binding protein; COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950:IPR006059; KEGG: pth:PTH_0675 ABC-type molybdate transport system, periplasmic component; PFAM: extracellular solute-binding protein family 1; SPTR: A5D4J6 ABC-type molybdate transport system, periplasmic component; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein.


ensembl_gene_id: Slip_2124
symbol: Slip_2124
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR000385:IPR006638:IPR007197; KEGG: glo:Glov_0422 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B3E297 Radical SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.


ensembl_gene_id: Slip_2125
symbol: Slip_2125
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510; KEGG: dau:Daud_0148 nitrogenase; PFAM: oxidoreductase/nitrogenase component 1; SPTR: B1I0Z3 Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Slip_2126
symbol: Slip_2126
gene_biotype: protein_coding
description:
  Nitrogenase; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510; KEGG: dau:Daud_0147 nitrogenase; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: B1I0Z2 Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Slip_2127
symbol: Slip_2127
gene_biotype: protein_coding
description:
  COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005974:IPR010143:IPR000318:IPR000510; KEGG: mta:Moth_0551 nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; SPTR: Q2RL08 Nitrogenase protein alpha chain; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase alpha chain.


ensembl_gene_id: Slip_2128
symbol: Slip_2128
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR011322:IPR015867:IPR017918:IPR002187; KEGG: cts:Ctha_1830 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: B3QTT9 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Slip_2129
symbol: Slip_2129
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR011322:IPR015867:IPR017918:IPR002187; KEGG: mvn:Mevan_0064 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: A6UNA6 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Slip_2130
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: Slip_2131
symbol: Slip_2131
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: pth:PTH_0667 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A5D4I8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_2132
symbol: Slip_2132
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR018842; KEGG: chy:CHY_0074 EAL domain-containing protein; PFAM: EAL domain protein; EAL-like; SMART: EAL domain protein; SPTR: Q3AFY8 EAL domain protein; PFAM: EAL domain; EAL-domain associated signalling protein domain.


ensembl_gene_id: Slip_2133
symbol: Slip_2133
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2191; InterPro IPR019239; KEGG: csc:Csac_1518 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: C1XWM1 Uncharacterized conserved protein (DUF2191)/integrase family protein; manually curated; PFAM: Uncharacterized protein conserved in bacteria (DUF2191).


ensembl_gene_id: Slip_2135
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Slip_2136
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Slip_2137
symbol: Slip_2137
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR000759:IPR013027:IPR006076; KEGG: swo:Swol_2101 NAD(FAD)-utilizing dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: Q0AV61 NAD(FAD)-utilizing dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Slip_2138
symbol: Slip_2138
gene_biotype: protein_coding
description:
  YbbR family protein; COGs: COG4856 conserved hypothetical protein; InterPro IPR012505; KEGG: swo:Swol_2102 hypothetical protein; PFAM: YbbR family protein; SPTR: Q0AV60 Putative uncharacterized protein; PFAM: YbbR-like protein.


ensembl_gene_id: Slip_2139
symbol: dacA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: Slip_2140
symbol: Slip_2140
gene_biotype: protein_coding
description:
  Protein of unknown function DUF72; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: sth:STH1050 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Q67QK8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF72.


ensembl_gene_id: Slip_2141
symbol: Slip_2141
gene_biotype: protein_coding
description:
  COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR016195:IPR003141:IPR004013:IPR 011708:IPR004365; KEGG: sth:STH1885 DNA polymerase III alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: Q67N73 Error-prone DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc).


ensembl_gene_id: Slip_2143
symbol: Slip_2143
gene_biotype: protein_coding
description:
  UMUC domain protein DNA-repair protein; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR017963:IPR001126; KEGG: tte:TTE0254 nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: UMUC domain protein DNA-repair protein; SPTR: C1WS49 Nucleotidyltransferase/DNA polymerase involved in DNA repair; manually curated; PFAM: impB/mucB/samB family.


ensembl_gene_id: Slip_2145
symbol: Slip_2145
gene_biotype: protein_coding
description:
  KEGG: aba:Acid345_3676 hypothetical protein; SPTR: A6CBY3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3592).


ensembl_gene_id: Slip_2146
symbol: Slip_2146
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: phe:Phep_3358 metallophosphoesterase; SPTR: A0YMW7 Putative uncharacterized protein.


ensembl_gene_id: Slip_2147
symbol: Slip_2147
gene_biotype: protein_coding
description:
  InterPro IPR008969:IPR018806:IPR013229:IPR000627; KEGG: cpi:Cpin_5754 conserved repeat domain protein; PFAM: Domain of unknown function DUF2402, GPI-anchored glycine/serine rich; PEGA domain protein; intradiol ring-cleavage dioxygenase; SPTR: Q8IFX6 Putative uncharacterized protein; PFAM: Developmentally Regulated MAPK Interacting Protein; PEGA domain; CARDB.


ensembl_gene_id: Slip_2150
symbol: rtcB
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: adg:Adeg_1757 protein of unknown function UPF0027; PFAM: protein of unknown function UPF0027; SPTR: C9R967 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027; Belongs to the RtcB family.


ensembl_gene_id: Slip_2153
symbol: Slip_2153
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: kcr:Kcr_1527 DNA polymerase II large subunit; SPTR: B1L744 DNA polymerase II, large subunit DP2.


ensembl_gene_id: Slip_2154
symbol: Slip_2154
gene_biotype: protein_coding
description:
  L-lactate permease family protein, putative; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: Slip_2155
symbol: Slip_2155
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase/homocitrate synthase family protein; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR005675:IPR013709:IPR013785:IPR002034:IPR 000891; KEGG: swo:Swol_2139 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; PRIAM: (R)-citramalate synthase; SPTR: Q0AV24 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthas [...]


ensembl_gene_id: Slip_2156
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: Slip_2158
symbol: leuC-2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Slip_2159
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: Slip_2160
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: Slip_2161
symbol: Slip_2161
gene_biotype: protein_coding
description:
  COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: mta:Moth_2257 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Q2RG95 Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit.


ensembl_gene_id: Slip_2162
symbol: Slip_2162
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR012846:IPR000399:IPR012001:IPR012000:IPR 011766; KEGG: swo:Swol_2146 acetolactate synthase large subunit; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q0AV17 Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-ter [...]


ensembl_gene_id: Slip_2163
symbol: ilvD
gene_biotype: protein_coding
description:
  COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR004404:IPR020558:IPR000581; KEGG: swo:Swol_2147 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Q0AV16 Dihydroxyacid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Slip_2164
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Slip_2166
symbol: Slip_2166
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: swo:Swol_2150 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AV13 Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_2169
symbol: Slip_2169
gene_biotype: protein_coding
description:
  HhH-GPD family protein; COGs: COG2231 Uncharacterized protein related to Endonuclease III; InterPro IPR011257:IPR003265:IPR003651:IPR004035; KEGG: hmo:HM1_0114 base excision repair protein, hhh-gpd family; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; SPTR: B0TD41 Base excision repair protein, hhh-gpd family; PFAM: HhH-GPD superfamily base excision DNA repair protein.


ensembl_gene_id: Slip_2171
symbol: argH
gene_biotype: protein_coding
description:
  COGs: COG0165 Argininosuccinate lyase; InterProIPR008948:IPR003031:IPR000362:IPR009049:IPR 020557; KEGG: dae:Dtox_0572 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: C8W637 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase.


ensembl_gene_id: Slip_2172
symbol: argG
gene_biotype: protein_coding
description:
  COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518:IPR014729:IPR018223; KEGG: chy:CHY_2260 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Q3A9W5 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; manually curated; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: Slip_2173
symbol: Slip_2173
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG0456 Acetyltransferase; InterPro IPR016181:IPR000182; KEGG: swo:Swol_2174 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Q0AUY9 Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Slip_2174
symbol: Slip_2174
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: Slip_2175
symbol: argD
gene_biotype: protein_coding
description:
  COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterProIPR015424:IPR004636:IPR015422:IPR015421:IPR 005814; KEGG: swo:Swol_2288 acetylornithine and succinylornithine aminotransferases; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Q0AUM5 Acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: Slip_2176
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: Slip_2177
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: Slip_2178
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: Slip_2179
symbol: Slip_2179
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: pth:PTH_0440 arsenite S-adenosylmethyltransferase; PFAM: Methyltransferase type 11; SPTR: C6PZ19 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Slip_2180
symbol: Slip_2180
gene_biotype: protein_coding
description:
  InterPro IPR012753:IPR007712; KEGG: dae:Dtox_2205 addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; SPTR: C8VZP5 Addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.


ensembl_gene_id: Slip_2182
symbol: Slip_2182
gene_biotype: protein_coding
description:
  COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: kol:Kole_0477 biotin/lipoate A/B protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: C5CE96 Biotin/lipoate A/B protein ligase; PFAM: Biotin/lipoate A/B protein ligase family.


ensembl_gene_id: Slip_2183
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Slip_2184
symbol: Slip_2184
gene_biotype: protein_coding
description:
  COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR016156:IPR013027:IPR000815:IPR006258:IPR 004099:IPR012999; KEGG: chy:CHY_0713 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Q3AE67 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisatio [...]


ensembl_gene_id: Slip_2185
symbol: Slip_2185
gene_biotype: protein_coding
description:
  OsmC family protein; InterPro IPR003718:IPR015946; KEGG: ote:Oter_1310 OsmC family protein; PFAM: OsmC family protein; SPTR: A6EMY0 OsmC-like protein; PFAM: OsmC-like protein.


ensembl_gene_id: Slip_2186
symbol: Slip_2186
gene_biotype: protein_coding
description:
  DGC domain protein; InterPro IPR014958; KEGG: mta:Moth_2216 hypothetical protein; PFAM: DGC domain protein; SPTR: C0CIG2 Putative uncharacterized protein; PFAM: DGC domain.


ensembl_gene_id: Slip_2187
symbol: Slip_2187
gene_biotype: protein_coding
description:
  DGC domain protein; InterPro IPR014958; KEGG: mta:Moth_2217 hypothetical protein; PFAM: DGC domain protein; SPTR: Q2RGD3 Putative uncharacterized protein; PFAM: DGC domain.


ensembl_gene_id: Slip_2188
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Slip_2189
symbol: Slip_2189
gene_biotype: protein_coding
description:
  Arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706:IPR002657; KEGG: bcq:BCQ_3008 arsenical-resistance protein; PFAM: Bile acid:sodium symporter; SPTR: C3H311 Arsenite resistance protein arsB; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein.


ensembl_gene_id: Slip_2191
symbol: Slip_2191
gene_biotype: protein_coding
description:
  Protein of unknown function DUF81; InterPro IPR002781; KEGG: kcr:Kcr_0277 permease; PFAM: protein of unknown function DUF81; SPTR: B1L3K6 Predicted permease; PFAM: Sulfite exporter TauE/SafE.


ensembl_gene_id: Slip_2192
symbol: Slip_2192
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; InterPro IPR001845:IPR011991; KEGG: amt:Amet_2013 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A6TPQ8 Regulatory protein, ArsR; PFAM: Bacterial regulatory protein, arsR family.


ensembl_gene_id: Slip_2193
symbol: Slip_2193
gene_biotype: protein_coding
description:
  Transcriptional regulator, PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR011991:IPR005149; KEGG: mta:Moth_2223 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: Q2RGC9 Transcriptional regulator, PadR family; PFAM: Transcriptional regulator PadR-like family.


ensembl_gene_id: Slip_2195
symbol: Slip_2195
gene_biotype: protein_coding
description:
  Permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: nth:Nther_0966 permease; PFAM: permease; SPTR: B2A0I9 Permease; PFAM: Predicted permease.


ensembl_gene_id: Slip_2196
symbol: Slip_2196
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1911 hypothetical protein; SPTR: Q0AVP6 Putative uncharacterized protein; PFAM: GPR1/FUN34/yaaH family.


ensembl_gene_id: Slip_2197
symbol: Slip_2197
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753:IPR018376; KEGG: drm:Dred_1781 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: A4J5F3 Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_2198
symbol: Slip_2198
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR006638:IPR016431:IPR013785:IPR007197; KEGG: swo:Swol_2293 pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AUM0 Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_2200
symbol: Slip_2200
gene_biotype: protein_coding
description:
  COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508:IPR014234; KEGG: swo:Swol_2295 N-acetylmuramoyl-L-alanine amidase-like protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: Q0AUL8 N-acetylmuramoyl-L-alanine amidase-like protein; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD.


ensembl_gene_id: Slip_2201
symbol: rpsI
gene_biotype: protein_coding
description:
  COGs: COG0103 Ribosomal protein S9; InterPro IPR020568:IPR014721:IPR000754:IPR020574; KEGG: swo:Swol_2297 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: Q0AUL6 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: Slip_2202
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Slip_2203
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Slip_2204
symbol: Slip_2204
gene_biotype: protein_coding
description:
  COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: aoe:Clos_0525 cobalt transport protein; PFAM: cobalt transport protein; SPTR: A8MLH3 Cobalt transport protein; PFAM: Cobalt transport protein.


ensembl_gene_id: Slip_2205
symbol: Slip_2205
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cno:NT01CX_1147 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0PXX8 Cobalt import ATP-binding protein cbiO 2; PFAM: ABC transporter.


ensembl_gene_id: Slip_2206
symbol: Slip_2206
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: tte:TTE2261 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q8R7Y4 Cobalt import ATP-binding protein cbiO 2; PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal.


ensembl_gene_id: Slip_2207
symbol: rplQ
gene_biotype: protein_coding
description:
  COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: tpd:Teth39_0403 ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: C6Q9K7 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17.


ensembl_gene_id: Slip_2208
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Slip_2209
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Slip_2210
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Slip_2211
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Slip_2212
symbol: rpmJ
gene_biotype: protein_coding
description:
  Ribosomal protein L36; InterPro IPR000473; KEGG: mta:Moth_2435 50S ribosomal protein L36P; PFAM: ribosomal protein L36; SPTR: Q2RFS2 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: Slip_2213
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Slip_2215
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Slip_2216
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: Slip_2217
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Slip_2218
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Slip_2219
symbol: rpmD
gene_biotype: protein_coding
description:
  COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR016082:IPR005996:IPR000517; KEGG: swo:Swol_2315 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: Q0AUJ8 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle.


ensembl_gene_id: Slip_2220
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Slip_2221
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Slip_2222
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Slip_2223
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Slip_2224
symbol: rpsZ
gene_biotype: protein_coding
description:
  Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: Slip_2225
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Slip_2226
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: Slip_2227
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Slip_2228
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Slip_2229
symbol: rpmC
gene_biotype: protein_coding
description:
  Ribosomal protein L29; InterPro IPR001854:IPR018254; KEGG: tpd:Teth39_0382 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: C6PEE6 Ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: Slip_2230
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Slip_2231
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Slip_2232
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: Slip_2233
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Slip_2234
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Slip_2235
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Slip_2237
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: Slip_2238
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Slip_2239
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: Slip_2241
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Slip_2242
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: Slip_2243
symbol: Slip_2243
gene_biotype: protein_coding
description:
  InterPro IPR004038; KEGG: mta:Moth_2466 50S ribosomal protein L7AE; PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; SPTR: Q2RFP1 LSU ribosomal protein L7AE; PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family.


ensembl_gene_id: Slip_2244
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Slip_2245
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Slip_2246
symbol: Slip_2246
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cbe:Cbei_4823 methyl-accepting chemotaxis sensory transducer; SPTR: C0WCX9 Putative uncharacterized protein.


ensembl_gene_id: Slip_2247
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Slip_2248
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Slip_2249
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Slip_2250
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Slip_2251
symbol: nusG
gene_biotype: protein_coding
description:
  NusG antitermination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Slip_2252
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: Slip_2253
symbol: rpmG
gene_biotype: protein_coding
description:
  COGs: COG0267 Ribosomal protein L33; InterPro IPR001705; KEGG: swo:Swol_2349 ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: Q0AUG4 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: Slip_2254
symbol: Slip_2254
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR016371:IPR014218:IPR 014284:IPR011991:IPR007627:IPR013249:IPR000792:IPR000943; KEGG: swo:Swol_2351 RNA polymerase factor sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Q0AUG2 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, [...]


ensembl_gene_id: Slip_2255
symbol: Slip_2255
gene_biotype: protein_coding
description:
  Protein of unknown function DUF901; COGs: COG3688 RNA-binding protein containing a PIN domain; InterPro IPR010298; KEGG: pth:PTH_0300 RNA binding protein; PFAM: protein of unknown function DUF901; SPTR: A5D5J8 Predicted RNA binding protein; PFAM: Protein of unknown function (DUF901).


ensembl_gene_id: Slip_2256
symbol: Slip_2256
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; COGs: COG0566 rRNA methylase; InterPro IPR004441:IPR013123:IPR001537; KEGG: swo:Swol_2352 putative tRNA/rRNA methyltransferase YacO; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superf [...]


ensembl_gene_id: Slip_2257
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: Slip_2258
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: Slip_2259
symbol: cysS
gene_biotype: protein_coding
description:
  COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR009080:IPR015803:IPR002308:IPR014729:IPR 015273; KEGG: pth:PTH_0295 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: A5D5M0 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Slip_2260
symbol: Slip_2260
gene_biotype: protein_coding
description:
  COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR005881:IPR001451; KEGG: swo:Swol_2356 serine O-acetyltransferase; SPTR: Q0AUF8 Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase.


ensembl_gene_id: Slip_2261
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: Slip_2262
symbol: ispF
gene_biotype: protein_coding
description:
  2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: Slip_2263
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: Slip_2264
symbol: Slip_2264
gene_biotype: protein_coding
description:
  COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR006596:IPR002792:IPR002716; KEGG: swo:Swol_2362 pili retraction protein PilT; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; SPTR: Q0AUF3 Pili retraction protein PilT; PFAM: TRAM domain; PIN domain.


ensembl_gene_id: Slip_2266
symbol: disA
gene_biotype: protein_coding
description:
  DNA integrity scanning, DisA, linker region; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: Slip_2267
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Slip_2268
symbol: Slip_2268
gene_biotype: protein_coding
description:
  ATPase AAA-2 domain protein; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR001270:IPR003593:IPR001943:IPR004176:IPR 003959:IPR013093:IPR019489:IPR018368; KEGG: swo:Swol_2367 ATPases with chaperone activity, ATP-binding subunit; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: Q0AUE8 ATPases with chaperone activity, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC mo [...]


ensembl_gene_id: Slip_2269
symbol: mcsB
gene_biotype: protein_coding
description:
  ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in proteins.


ensembl_gene_id: Slip_2270
symbol: Slip_2270
gene_biotype: protein_coding
description:
  UvrB/UvrC protein; COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; InterPro IPR001943; KEGG: swo:Swol_2369 hypothetical protein; PFAM: UvrB/UvrC protein; SPTR: Q0AUE6 Putative uncharacterized protein; PFAM: UvrB/uvrC motif.


ensembl_gene_id: Slip_2271
symbol: Slip_2271
gene_biotype: protein_coding
description:
  Transcriptional repressor, CtsR; COGs: COG4463 Transcriptional repressor of class III stress genes; InterPro IPR008463; KEGG: chy:CHY_2351 transcriptional regulator CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes; SPTR: C2LYJ9 Transcriptional regulator CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR).


ensembl_gene_id: Slip_2272
symbol: Slip_2272
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG0849 Actin-like ATPase involved in cell division; KEGG: swo:Swol_2371 hypothetical protein; SPTR: Q0AUE4 Putative uncharacterized protein; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA.


ensembl_gene_id: Slip_2273
symbol: Slip_2273
gene_biotype: protein_coding
description:
  Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: Slip_2274
symbol: Slip_2274
gene_biotype: protein_coding
description:
  COGs: COG4786 Flagellar basal body rod protein; InterProIPR020013:IPR012836:IPR001444:IPR010930:IPR 019776; KEGG: swo:Swol_2373 flagellar basal-body rod protein (FlgG-2); PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: Q0AUE2 Flagellar basal-body rod protein (FlgG-2); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins.


ensembl_gene_id: Slip_2275
symbol: Slip_2275
gene_biotype: protein_coding
description:
  Cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: swo:Swol_2374 rod shape-determining protein Mbl; PFAM: cell shape determining protein MreB/Mrl; SPTR: Q0AUE1 Rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.


ensembl_gene_id: Slip_2276
symbol: Slip_2276
gene_biotype: protein_coding
description:
  Sporulation transcriptional regulator SpoIIID; InterPro IPR014208:IPR018356; KEGG: swo:Swol_2375 stage III sporulation protein D; SPTR: Q0AUE0 Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID; PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID.


ensembl_gene_id: Slip_2277
symbol: Slip_2277
gene_biotype: protein_coding
description:
  SpoIID/LytB domain protein; COGs: COG2385 Sporulation protein and related protein; InterPro IPR014225:IPR013486:IPR013693; KEGG: chy:CHY_2541 stage II sporulation protein D; PFAM: Stage II sporulation D domain protein; SPTR: Q3A950 Stage II sporulation protein D; TIGRFAM: SpoIID/LytB domain protein; stage II sporulation protein D; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D.


ensembl_gene_id: Slip_2279
symbol: Slip_2279
gene_biotype: protein_coding
description:
  KEGG: aoe:Clos_2556 hypothetical protein; SPTR: A8MJV5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1779).


ensembl_gene_id: Slip_2281
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Slip_2282
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Slip_2283
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Slip_2284
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Slip_2285
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Slip_2286
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Slip_2287
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Slip_2288
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: Slip_2291
symbol: Slip_2291
gene_biotype: protein_coding
description:
  InterPro IPR004518; KEGG: chy:CHY_2555 nucleotide pyrophosphohydrolase domain-containing protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: Q3A936 Nucleotide pyrophosphohydrolase domain protein; PFAM: MazG nucleotide pyrophosphohydrolase domain.


ensembl_gene_id: Slip_2292
symbol: Slip_2292
gene_biotype: protein_coding
description:
  CMP/dCMP deaminase zinc-binding protein; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR016193:IPR016473:IPR002125:IPR016192; KEGG: swo:Swol_2391 putative ComE operon protein 2; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Q0AUC4 Putative ComE operon protein 2; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.


ensembl_gene_id: Slip_2293
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Slip_2294
symbol: Slip_2294
gene_biotype: protein_coding
description:
  Sugar-phosphate isomerase, RpiB/LacA/LacB family; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: chy:CHY_2558 ribose-5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Q3A933 Ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.


ensembl_gene_id: Slip_2295
symbol: Slip_2295
gene_biotype: protein_coding
description:
  COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867:IPR000106; KEGG: adg:Adeg_0069 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: C9RAD6 Protein tyrosine phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.


ensembl_gene_id: Slip_2297
symbol: Slip_2297
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: Slip_2298
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Slip_2299
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Slip_2300
symbol: Slip_2300
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1385; COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: swo:Swol_2398 hypothetical protein; PFAM: protein of unknown function DUF1385; SPTR: Q0AUB7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1385).


ensembl_gene_id: Slip_2303
symbol: Slip_2303
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG2100 Fe-S oxidoreductase; InterPro IPR007197; KEGG: swo:Swol_2405 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Q0AUB0 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_2305
symbol: Slip_2305
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR002482:IPR018392:IPR016047; KEGG: swo:Swol_2406 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Q0AUA9 Peptidase M23B; PFAM: Peptidase family M23; LysM domain.


ensembl_gene_id: Slip_2306
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Slip_2308
symbol: Slip_2308
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase, class II; COGs: COG1494 Fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein; InterPro IPR004464; KEGG: swo:Swol_2409 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; PRIAM: Fructose-bisphosphatase; SPTR: Q0AUA6 Putative uncharacterized protein; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II.


ensembl_gene_id: Slip_2309
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: Slip_2310
symbol: Slip_2310
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase, class II; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771:IPR011289:IPR013785; KEGG: swo:Swol_2411 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; PRIAM: Tagatose-bisphosphate aldolase; SPTR: Q0AUA4 Fructose-bisphosphate aldolase; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist.


ensembl_gene_id: Slip_2311
symbol: Slip_2311
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: swo:Swol_2412 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q0AUA3 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Slip_2312
symbol: Slip_2312
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_2413 hypothetical protein; SPTR: Q0AUA2 Putative uncharacterized protein; PFAM: Yip1 domain.


ensembl_gene_id: Slip_2313
symbol: Slip_2313
gene_biotype: protein_coding
description:
  Signal peptide peptidase SppA, 36K type; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004635:IPR002142; KEGG: swo:Swol_2415 periplasmic serine proteases (ClpP class); PFAM: peptidase S49; SPTR: Q0AUA0 Signal peptide peptidase A. Serine peptidase. MEROPS family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.


ensembl_gene_id: Slip_2315
symbol: Slip_2315
gene_biotype: protein_coding
description:
  Methicillin resistance protein; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR016181:IPR003447; KEGG: swo:Swol_2417 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Q0AU98 Methicillin resistance protein; PFAM: FemAB family.


ensembl_gene_id: Slip_2316
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Slip_2317
symbol: Slip_2317
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: tma:TM0207 hypothetical protein; SPTR: Q9WY50 Putative uncharacterized protein.


ensembl_gene_id: Slip_2318
symbol: Slip_2318
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_2420 hypothetical protein; SPTR: Q0AU95 Putative uncharacterized protein; PFAM: DNA-directed RNA polymerase delta subunit.


ensembl_gene_id: Slip_2319
symbol: argS
gene_biotype: protein_coding
description:
  COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR009080:IPR005148:IPR015945:IPR001278:IPR 014729:IPR008909:IPR001412; KEGG: swo:Swol_2421 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: Q0AU94 Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase.


ensembl_gene_id: Slip_2321
symbol: Slip_2321
gene_biotype: protein_coding
description:
  Peptidase M1 membrane alanine aminopeptidase; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: swo:Swol_2423 aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Q0AU92 Aminopeptidase N; PFAM: Peptidase family M1.


ensembl_gene_id: Slip_2322
symbol: Slip_2322
gene_biotype: protein_coding
description:
  S-layer domain protein; InterPro IPR001119; KEGG: aoe:Clos_2602 S-layer domain-containing protein; PFAM: S-layer domain protein; SPTR: A8MK01 S-layer domain protein; manually curated; PFAM: S-layer homology domain.


ensembl_gene_id: Slip_2323
symbol: Slip_2323
gene_biotype: protein_coding
description:
  S-layer domain protein; InterPro IPR001119; KEGG: tte:TTE0166 S-layer-like domain-containing protein; PFAM: S-layer domain protein; SPTR: C6P9V8 S-layer domain protein; PFAM: S-layer homology domain.


ensembl_gene_id: Slip_2324
symbol: Slip_2324
gene_biotype: protein_coding
description:
  Fibronectin type III domain protein; InterProIPR014756:IPR008957:IPR002909:IPR003961:IPR 013783:IPR001412:IPR000276; KEGG: tte:TTE0165 hypothetical protein; PFAM: Fibronectin type III domain protein; cell surface receptor IPT/TIG domain protein; SMART: Fibronectin type III domain protein; cell surface receptor IPT/TIG domain protein; SPTR: Q8RD81 Putative uncharacterized protein; PFAM: IPT/TIG domain; Fibronectin type III domain.


ensembl_gene_id: Slip_2325
symbol: Slip_2325
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: leucine-rich repeat-containing protein; SPTR: B1BCS1 Histidyl-tRNA synthetase.


ensembl_gene_id: Slip_2326
symbol: glnS
gene_biotype: protein_coding
description:
  COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR011035:IPR020060:IPR004514:IPR020061:IPR 020056:IPR020058:IPR020059:IPR001412; KEGG: pth:PTH_2867 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; SPTR: A5CY90 Glutamyl-and glutaminyl-tRNA synthetases; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; gl [...]


ensembl_gene_id: Slip_2327
symbol: rlmH
gene_biotype: protein_coding
description:
  Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Slip_2331
symbol: Slip_2331
gene_biotype: protein_coding
description:
  COGs: COG0492 Thioredoxin reductase; InterPro IPR000103:IPR013027:IPR005982:IPR008255; KEGG: swo:Swol_2471 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q0AU44 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.


ensembl_gene_id: Slip_2332
symbol: Slip_2332
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterProIPR011055:IPR002482:IPR011098:IPR018392:IPR 016047; KEGG: swo:Swol_2472 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; G5 domain protein; SMART: Peptidoglycan-binding LysM; SPTR: Q0AU43 Peptidase M23B; PFAM: Peptidase family M23; G5 domain; LysM domain.


ensembl_gene_id: Slip_2333
symbol: Slip_2333
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197:IPR000385; KEGG: swo:Swol_2473 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Q0AU42 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_2334
symbol: Slip_2334
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_4920 hypothetical protein; SPTR: C9LXC7 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Slip_2335
symbol: Slip_2335
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; InterPro IPR003607:IPR006674; KEGG: cce:Ccel_2964 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C3CV65 Putative uncharacterized protein; PFAM: HD domain.


ensembl_gene_id: Slip_2338
symbol: Slip_2338
gene_biotype: protein_coding
description:
  ATPase; InterPro IPR011579; KEGG: mta:Moth_1746 hypothetical protein; PFAM: ATPase; SPTR: Q2RHP2 Putative uncharacterized protein; PFAM: Archaeal ATPase.


ensembl_gene_id: Slip_2339
symbol: Slip_2339
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; InterPro IPR016196:IPR011701; KEGG: tye:THEYE_A1806 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: B5YHL1 Conserved protein; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Slip_2340
symbol: Slip_2340
gene_biotype: protein_coding
description:
  Drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR001411:IPR004638:IPR011701; KEGG: chy:CHY_1864 EmrB/QacA family drug resistance transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Q3AB00 Drug resistance transporter, EmrB/QacA family; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Slip_2341
symbol: Slip_2341
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR003997:IPR006143; KEGG: aca:ACP_3452 transporter, MFP family; PFAM: secretion protein HlyD family protein; SPTR: A1HMI0 Secretion protein HlyD family protein; PFAM: HlyD family secretion protein; TIGRFAM: ABC exporter membrane fusion protein, DevB family.


ensembl_gene_id: Slip_2342
symbol: Slip_2342
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR009057:IPR011075:IPR001647:IPR012287; KEGG: dal:Dalk_4836 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: C1SP64 Transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Slip_2343
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Slip_2346
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Slip_2347
symbol: Slip_2347
gene_biotype: protein_coding
description:
  COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR016027:IPR011344:IPR000424:IPR012340; KEGG: swo:Swol_2539 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Q0ATX7 Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).


ensembl_gene_id: Slip_2349
symbol: Slip_2349
gene_biotype: protein_coding
description:
  COGs: COG1073 Hydrolase of the alpha/beta superfamily; InterPro IPR000073; KEGG: swo:Swol_2084 alpha/beta fold family hydrolase N; PFAM: alpha/beta hydrolase fold; SPTR: Q0AV78 Hydrolase of the alpha/beta superfamily N; PFAM: Prolyl oligopeptidase family.


ensembl_gene_id: Slip_2351
symbol: Slip_2351
gene_biotype: protein_coding
description:
  Protein of unknown function DUF951; COGs: COG4481 conserved hypothetical protein; InterPro IPR009296; KEGG: swo:Swol_2541 hypothetical protein; PFAM: protein of unknown function DUF951; SPTR: Q0ATX5 Uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF951).


ensembl_gene_id: Slip_2354
symbol: Slip_2354
gene_biotype: protein_coding
description:
  COGs: COG1362 Aspartyl aminopeptidase; InterPro IPR001948; KEGG: swo:Swol_2543 putative aminopeptidase 1; PFAM: peptidase M18 aminopeptidase I; SPTR: Q0ATX3 M18 family aminopeptidase; PFAM: Aminopeptidase I zinc metalloprotease (M18).


ensembl_gene_id: Slip_2355
symbol: Slip_2355
gene_biotype: protein_coding
description:
  DNA polymerase beta domain protein region; InterPro IPR002934; KEGG: chy:CHY_1716 nucleotidyltransferase/HEPN domain-containing protein; PFAM: DNA polymerase beta domain protein region; SPTR: Q3ABE8 Nucleotidyltransferase/HEPN domain protein; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Slip_2356
symbol: Slip_2356
gene_biotype: protein_coding
description:
  HEPN domain protein; InterPro IPR007842; KEGG: chy:CHY_1716 nucleotidyltransferase/HEPN domain-containing protein; PFAM: HEPN domain protein; SPTR: Q3ABE8 Nucleotidyltransferase/HEPN domain protein; PFAM: HEPN domain.


ensembl_gene_id: Slip_2357
symbol: Slip_2357
gene_biotype: protein_coding
description:
  COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644:IPR013785:IPR002912; KEGG: swo:Swol_2551 signal transduction protein; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein; SPTR: Q0ATW6 Putative signal transduction protein with CBS domains; PFAM: CBS domain; ACT domain.


ensembl_gene_id: Slip_2358
symbol: Slip_2358
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: swo:Swol_2552 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0ATW5 Branched-chain amino acid ABC transporter (ATP-binding protein); PFAM: ABC transporter.


ensembl_gene_id: Slip_2359
symbol: Slip_2359
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: swo:Swol_2553 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0ATW4 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.


ensembl_gene_id: Slip_2360
symbol: Slip_2360
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: swo:Swol_2554 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Q0ATW3 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Slip_2361
symbol: Slip_2361
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: swo:Swol_2555 high affinity branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Q0ATW2 High affinity branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Slip_2362
symbol: Slip_2362
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709:IPR001828; KEGG: swo:Swol_2556 branched chain amino acid ABC transporter (substrate-binding protein); PFAM: Extracellular ligand-binding receptor; SPTR: Q0ATW1 Branched chain amino acid ABC transporter (Substrate-binding protein); PFAM: Receptor family ligand binding region.


ensembl_gene_id: Slip_2363
symbol: Slip_2363
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: swo:Swol_2557 2-hydroxyglutaryl-CoA dehydratase activator; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: Q0ATW0 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: Slip_2364
symbol: Slip_2364
gene_biotype: protein_coding
description:
  COGs: COG3581 conserved hypothetical protein; KEGG: swo:Swol_2558 hypothetical protein; SPTR: Q0ATV9 Putative uncharacterized protein.


ensembl_gene_id: Slip_2365
symbol: Slip_2365
gene_biotype: protein_coding
description:
  COGs: COG3580 conserved hypothetical protein; KEGG: swo:Swol_2559 hypothetical protein; SPTR: Q0ATV8 Putative uncharacterized protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; CoA enzyme activase uncharacterised domain (DUF2229).


ensembl_gene_id: Slip_2366
symbol: Slip_2366
gene_biotype: protein_coding
description:
  COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR009000:IPR009001:IPR000795:IPR005225:IPR 004535:IPR011991:IPR004161:IPR015190:IPR015191; KEGG: swo:Swol_2560 selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; SPTR: Q0ATV7 Selenocysteine-specific translation elongation factor SelB; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: Elongation factor [...]


ensembl_gene_id: Slip_2367
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: Slip_2368
symbol: Slip_2368
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG3949 Uncharacterized membrane protein; KEGG: swo:Swol_2562 hypothetical protein; SPTR: Q0ATV5 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Slip_2369
symbol: Slip_2369
gene_biotype: protein_coding
description:
  Sporulation protein YyaC; InterPro IPR009665; KEGG: swo:Swol_2563 YyaC; PFAM: protein of unknown function DUF1256; SPTR: Q0ATV4 YyaC; TIGRFAM: sporulation protein YyaC; PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC.


ensembl_gene_id: Slip_2370
symbol: Slip_2370
gene_biotype: protein_coding
description:
  COGs: COG1926 phosphoribosyltransferase; InterPro IPR000836; KEGG: dau:Daud_2224 phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: B1I6R3 Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.


ensembl_gene_id: Slip_2371
symbol: Slip_2371
gene_biotype: protein_coding
description:
  Protein of unknown function DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: swo:Swol_2564 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: Q0ATV3 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583.


ensembl_gene_id: Slip_2372
symbol: Slip_2372
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR016047; KEGG: swo:Swol_2565 metalloendopeptidase-like membrane protein; PFAM: Peptidase M23; SPTR: Q0ATV2 Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.


ensembl_gene_id: Slip_2374
symbol: larC
gene_biotype: protein_coding
description:
  Protein of unknown function DUF111; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: Slip_2375
symbol: Slip_2375
gene_biotype: protein_coding
description:
  parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437:IPR001387; KEGG: bbe:BBR47_59360 stage 0 sporulation protein J; PFAM: ParB domain protein nuclease; helix-turn-helix domain protein; SMART: ParB domain protein nuclease; SPTR: C0ZA59 Stage 0 sporulation protein J; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; Helix-turn-helix; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.


ensembl_gene_id: Slip_2376
symbol: Slip_2376
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: gwc:GWCH70_3425 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: C5D9Y3 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_2377
symbol: Slip_2377
gene_biotype: protein_coding
description:
  parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: swo:Swol_2569 transcriptional regulator; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Q0ATU8 Transcriptional regulator; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.


ensembl_gene_id: Slip_2378
symbol: rsmG
gene_biotype: protein_coding
description:
  Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: Slip_2379
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Slip_2380
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Slip_2381
symbol: Slip_2381
gene_biotype: protein_coding
description:
  COGs: COG1847 RNA-binding protein; InterPro IPR001374:IPR004044; KEGG: swo:Swol_2573 single-stranded nucleic acid binding R3H; PFAM: single-stranded nucleic acid binding R3H domain protein; KH type 2 domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; SPTR: Q0ATU4 Single-stranded nucleic acid binding R3H; PFAM: R3H domain.


ensembl_gene_id: Slip_2382
symbol: Slip_2382
gene_biotype: protein_coding
description:
  Membrane protein insertase, YidC/Oxa1 family; COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708:IPR013308:IPR020001; KEGG: pth:PTH_2919 preprotein translocase subunit YidC; PFAM: 60 kDa inner membrane insertion protein; SPTR: A5CY48 Preprotein translocase subunit YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain.


ensembl_gene_id: Slip_2383
symbol: Slip_2383
gene_biotype: protein_coding
description:
  Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Slip_2384
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Slip_2385
symbol: rpmH
gene_biotype: protein_coding
description:
  Ribosomal protein L34; InterPro IPR000271; KEGG: mrd:Mrad2831_3505 ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: B1LUP6 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; manually curated; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: Slip_R0041
symbol: ADI02595.1
gene_biotype: protein_coding
description:
  Recombinase; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: tex:Teth514_0698 recombinase; PFAM: Recombinase; Resolvase domain; SPTR: C7IHA5 Resolvase domain protein; tmRNA as predicted by Rfam (RF00023), score 218.42; PFAM: Recombinase; Resolvase, N terminal domain.


