# geneInfo

ensembl_gene_id: Slip_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Slip_0002
symbol: Slip_0002
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: Slip_0003
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: Slip_0005
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Slip_0006
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Slip_0007
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxine biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: Slip_0008
symbol: pdxT
gene_biotype: protein_coding
description:
  SNO glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: Slip_0009
symbol: Slip_0009
gene_biotype: protein_coding
description:
  COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR020578:IPR015424:IPR015421:IPR000192; KEGG: swo:Swol_0008 serine--glyoxylate transaminase; PFAM: aminotransferase class V; SPTR: Q0B0Y7 L-aspartate aminotransferase / phosphoserine aminotransferase; PFAM: Aminotransferase class-V.


ensembl_gene_id: Slip_0010
symbol: Slip_0010
gene_biotype: protein_coding
description:
  COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterProIPR006140:IPR016040:IPR006139:IPR002912:IPR 006236; KEGG: swo:Swol_0009 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; PRIAM: Phosphoglycerate dehydrogenase; SPTR: Q0B0Y6 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific  [...]


ensembl_gene_id: Slip_0011
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Slip_0012
symbol: tadA
gene_biotype: protein_coding
description:
  CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Slip_0013
symbol: Slip_0013
gene_biotype: protein_coding
description:
  COGs: COG2402 nucleic acid-binding protein contains PIN domain; KEGG: pth:PTH_2698 nucleic acid-binding protein; SPTR: A5CYP5 Predicted nucleic acid-binding protein; PFAM: PIN domain.


ensembl_gene_id: Slip_0016
symbol: Slip_0016
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: mta:Moth_2495 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q2RFL2 Metal dependent phosphohydrolase; PFAM: HD domain.


ensembl_gene_id: Slip_0017
symbol: Slip_0017
gene_biotype: protein_coding
description:
  Hemerythrin-like metal-binding protein; COGs: COG2703 Hemerythrin; InterPro IPR016131:IPR012827:IPR012312; KEGG: swo:Swol_2168 iron-binding protein, hemerythrin; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Q0AUZ5 Iron-binding protein, hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain.


ensembl_gene_id: Slip_0018
symbol: Slip_0018
gene_biotype: protein_coding
description:
  COGs: COG3552 Protein containing von Willebrand factor type A (vWA) domain; InterPro IPR008912; KEGG: ank:AnaeK_1513 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SPTR: B4UK34 VWA containing CoxE family protein; PFAM: VWA domain containing CoxE-like protein.


ensembl_gene_id: Slip_0019
symbol: Slip_0019
gene_biotype: protein_coding
description:
  ATPase associated with various cellular activities AAA_5; COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: nca:Noca_0291 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: A1SDF1 ATPase associated with various cellular activities, AAA_5; PFAM: ATPase family associated with various cellular activities (AAA).


ensembl_gene_id: Slip_0020
symbol: Slip_0020
gene_biotype: protein_coding
description:
  ABC-2 type transporter; InterPro IPR000412:IPR013526:IPR013525; KEGG: dae:Dtox_3795 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: C8VXA6 ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family.


ensembl_gene_id: Slip_0021
symbol: Slip_0021
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR015851:IPR003593:IPR017871; KEGG: dae:Dtox_3796 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C8VXA7 ABC transporter related; PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI.


ensembl_gene_id: Slip_0022
symbol: Slip_0022
gene_biotype: protein_coding
description:
  COGs: COG5401 Spore germination protein; InterPro IPR019606:IPR018911; KEGG: swo:Swol_1052 spore germination protein-like protein; PFAM: Spore germination protein-like Gmad2, bacteria; Lipoprotein LpqB, GerMN domain; SPTR: Q0AY40 Spore germination protein-like protein; PFAM: Sporulation and spore germination; Immunoglobulin-like domain of bacterial spore germination.


ensembl_gene_id: Slip_0023
symbol: Slip_0023
gene_biotype: protein_coding
description:
  InterPro IPR001531:IPR000834:IPR008947; KEGG: cac:CA_P0148 phospholipase C; PFAM: phospholipase C zinc-binding protein; SMART: phospholipase C zinc-binding protein; SPTR: C9LC69 Phospholipase C; PFAM: Zinc dependent phospholipase C.


ensembl_gene_id: Slip_0025
symbol: Slip_0025
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterProIPR019734:IPR013026:IPR011990:IPR001173:IPR 001440:IPR013105; KEGG: adg:Adeg_0252 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: C9RAZ4 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; Tetratricopeptide repeat.


ensembl_gene_id: Slip_0026
symbol: Slip_0026
gene_biotype: protein_coding
description:
  KEGG: GSVIVT00003134001; hypothetical protein LOC100241300; SPTR: Q09HM7 Putative F-box and leucine-rich repeat protein.


ensembl_gene_id: Slip_0028
symbol: Slip_0028
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: Immunoglobulin I-set domain containing protein; SPTR: C3QQQ7 Putative uncharacterized protein.


ensembl_gene_id: Slip_0029
symbol: Slip_0029
gene_biotype: protein_coding
description:
  Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: ttr:Tter_2814 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: D1CIX8 Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.


ensembl_gene_id: Slip_0030
symbol: Slip_0030
gene_biotype: protein_coding
description:
  Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422; KEGG: dae:Dtox_1135 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: C8W4F3 Glutamine--scyllo-inositol transaminase; manually curated; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Slip_0031
symbol: Slip_0031
gene_biotype: protein_coding
description:
  Transferase hexapeptide repeat containing protein; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR011004:IPR001451; KEGG: tpe:Tpen_0895 hexapaptide repeat-containing transferase; PFAM: transferase hexapeptide repeat containing protein; SPTR: B5IQV0 Bacterial transferase hexapeptide repeat protein; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: Slip_0032
symbol: Slip_0032
gene_biotype: protein_coding
description:
  SirA family protein; InterPro IPR001455; KEGG: swo:Swol_2088 hypothetical protein; PFAM: SirA family protein; SPTR: Q0AV74 Putative uncharacterized protein; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Slip_0034
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Slip_0035
symbol: Slip_0035
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Slip_0036
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: Slip_0037
symbol: Slip_0037
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0033 hypothetical protein; SPTR: C0GJ89 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2508).


ensembl_gene_id: Slip_0038
symbol: Slip_0038
gene_biotype: protein_coding
description:
  pro-sigmaK processing inhibitor BofA; InterPro IPR010001; KEGG: swo:Swol_0034 SigmaK-factor processing regulatory BofA; PFAM: sigmaK-factor processing regulatory BofA; SPTR: Q0B0W1 SigmaK-factor processing regulatory BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA.


ensembl_gene_id: Slip_0040
symbol: Slip_0040
gene_biotype: protein_coding
description:
  Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR009014:IPR015941:IPR002880; KEGG: swo:Swol_0036 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: Q0B0V9 Putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit; PFAM: domain.


ensembl_gene_id: Slip_0041
symbol: Slip_0041
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate protein domain protein TPP-binding protein; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: swo:Swol_0037 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q0B0V8 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.


ensembl_gene_id: Slip_0042
symbol: Slip_0042
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR002869:IPR019752; KEGG: chy:CHY_0045 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: Q3AG17 Putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase.


ensembl_gene_id: Slip_0043
symbol: Slip_0043
gene_biotype: protein_coding
description:
  InterPro IPR017896:IPR017900:IPR001450; KEGG: nth:Nther_0025 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B2A312 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Slip_0044
symbol: Slip_0044
gene_biotype: protein_coding
description:
  Sigma-G inhibitor, Gin; InterPro IPR019700; KEGG: hmo:HM1_0761 hypothetical protein; PFAM: Sigma-G inhibitor, Gin; SPTR: B0TB67 Putative uncharacterized protein; PFAM: Inhibitor of sigma-G Gin.


ensembl_gene_id: Slip_0045
symbol: Slip_0045
gene_biotype: protein_coding
description:
  Orn/Lys/Arg decarboxylase major region; COGs: COG1982 Arginine/lysine/ornithine decarboxylase; InterPro IPR015424:IPR015421:IPR008286:IPR000310; KEGG: swo:Swol_0039 Orn/Lys/Arg decarboxylase, major region; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; SPTR: Q0B0V6 Orn/Lys/Arg decarboxylase, major region; PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain.


ensembl_gene_id: Slip_0046
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Slip_0047
symbol: Slip_0047
gene_biotype: protein_coding
description:
  Protein of unknown function DUF327; COGs: COG1728 conserved hypothetical protein; InterPro IPR005585; KEGG: swo:Swol_0041 hypothetical protein; PFAM: protein of unknown function DUF327; SPTR: Q0B0V4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF327).


ensembl_gene_id: Slip_0048
symbol: Slip_0048
gene_biotype: protein_coding
description:
  COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: swo:Swol_0042 DNA polymerase III, delta prime subunit; SPTR: Q0B0V3 DNA polymerase III, delta prime subunit.


ensembl_gene_id: Slip_0049
symbol: Slip_0049
gene_biotype: protein_coding
description:
  PSP1 domain protein; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: hmo:HM1_0757 PSP1 C-terminal conserved region, putative; PFAM: PSP1 domain protein; SPTR: A1HPS5 PSP1 domain protein; PFAM: PSP1 C-terminal conserved region.


ensembl_gene_id: Slip_0050
symbol: Slip_0050
gene_biotype: protein_coding
description:
  Protein of unknown function DUF972; InterPro IPR010377; KEGG: mta:Moth_0045 hypothetical protein; PFAM: protein of unknown function DUF972; SPTR: Q2RMF5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF972).


ensembl_gene_id: Slip_0051
symbol: Slip_0051
gene_biotype: protein_coding
description:
  COGs: COG4123 O-methyltransferase; InterPro IPR002052:IPR007848; KEGG: swo:Swol_0045 SAM-dependent methyltransferases; PFAM: methyltransferase small; SPTR: Q0B0V0 SAM-dependent methyltransferases; PFAM: Methyltransferase small domain; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Slip_0052
symbol: rsmI
gene_biotype: protein_coding
description:
  Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: Slip_0053
symbol: Slip_0053
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; InterPro IPR007159:IPR006339; KEGG: swo:Swol_0047 transcription regulator AbrB; PFAM: SpoVT/AbrB domain protein; SPTR: Q0B0U8 Transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_0054
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Slip_0055
symbol: Slip_0055
gene_biotype: protein_coding
description:
  Hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR012278:IPR001130:IPR015991; KEGG: swo:Swol_0050 TatD family hydrolase; PFAM: TatD-related deoxyribonuclease; SPTR: Q0B0U6 Hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.


ensembl_gene_id: Slip_0056
symbol: Slip_0056
gene_biotype: protein_coding
description:
  3D domain protein; COGs: COG3583 conserved hypothetical protein; InterPro IPR011098:IPR007137:IPR010611; KEGG: swo:Swol_0051 hypothetical protein; PFAM: 3D domain protein; G5 domain protein; protein of unknown function DUF348; SPTR: Q0B0U5 Putative uncharacterized protein; PFAM: 3D domain; Domain of unknown function (DUF348); G5 domain.


ensembl_gene_id: Slip_0057
symbol: Slip_0057
gene_biotype: protein_coding
description:
  Sporulation lipoprotein YhcN/YlaJ; InterPro IPR019076; KEGG: chy:CHY_1593 putative lipoprotein; PFAM: Sporulation lipoprotein YhcN/YlaJ-like; SPTR: Q3ABR3 Putative lipoprotein; PFAM: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family.


ensembl_gene_id: Slip_0058
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Slip_0059
symbol: Slip_0059
gene_biotype: protein_coding
description:
  Protein of unknown function DUF458; COGs: COG1978 conserved hypothetical protein; InterPro IPR007405; KEGG: swo:Swol_0054 hypothetical protein; PFAM: protein of unknown function DUF458; SPTR: Q0B0U2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF458).


ensembl_gene_id: Slip_0061
symbol: Slip_0061
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1021; COGs: COG4466 Uncharacterized protein; InterPro IPR009366; KEGG: swo:Swol_0055 hypothetical protein; PFAM: protein of unknown function DUF1021; SPTR: Q0B0U1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1021).


ensembl_gene_id: Slip_0064
symbol: Slip_0064
gene_biotype: protein_coding
description:
  SCP-like extracellular protein; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: sth:STH564 hypothetical protein; PFAM: SCP-like extracellular; SPTR: Q67RZ4 Putative uncharacterized protein; PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family.


ensembl_gene_id: Slip_0065
symbol: Slip_0065
gene_biotype: protein_coding
description:
  Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: swo:Swol_0062 hypothetical protein; PFAM: Patatin; SPTR: Q0B0T4 Putative uncharacterized protein; PFAM: Patatin-like phospholipase.


ensembl_gene_id: Slip_0069
symbol: Slip_0069
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG3481 HD-superfamily hydrolase; InterPro IPR003607:IPR006674:IPR006675; KEGG: kol:Kole_1658 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C5CFD8 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_0071
symbol: Slip_0071
gene_biotype: protein_coding
description:
  Protein of unknown function DUF559; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR011335:IPR007569; KEGG: sat:SYN_02909 DNA helicase; PFAM: protein of unknown function DUF559; SPTR: B7R5W0 Putative uncharacterized protein; PFAM: UvrD/REP helicase; Protein of unknown function (DUF559).


ensembl_gene_id: Slip_0078
symbol: Slip_0078
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1863; InterPro IPR015032; KEGG: cbe:Cbei_2803 hypothetical protein; PFAM: Domain of unknown function DUF1863; SPTR: A6LX73 Putative uncharacterized protein; PFAM: MTH538 TIR-like domain (DUF1863).


ensembl_gene_id: Slip_0079
symbol: Slip_0079
gene_biotype: protein_coding
description:
  Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: pth:PTH_0693 site-specific recombinases; PFAM: Resolvase domain; Recombinase; SPTR: C7HHF6 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.


ensembl_gene_id: Slip_0080
symbol: Slip_0080
gene_biotype: protein_coding
description:
  KEGG: bld:BLi01431 hypothetical protein; SPTR: Q65KT0 Putative uncharacterized protein; PFAM: Telomeric repeat-binding factor 2.


ensembl_gene_id: Slip_0084
symbol: Slip_0084
gene_biotype: protein_coding
description:
  Regulatory protein DeoR; InterPro IPR001034:IPR018356; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C7HHG0 Helix-turn-helix type 11 domain protein; PFAM: HTH domain.


ensembl_gene_id: Slip_0086
symbol: Slip_0086
gene_biotype: protein_coding
description:
  HNH endonuclease; COGs: COG3183 restriction endonuclease; InterPro IPR002711; KEGG: gka:GK0172 HNH endonuclease; PFAM: HNH endonuclease; SPTR: Q5L3M3 Hnh endonuclease; PFAM: HNH endonuclease.


ensembl_gene_id: Slip_0088
symbol: Slip_0088
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2081; COGs: COG3472 conserved hypothetical protein; InterPro IPR004919:IPR018651; KEGG: sti:Sthe_1561 protein of unknown function DUF262; PFAM: Protein of unknown function DUF2081; protein of unknown function DUF262; SPTR: D1C429 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262.


ensembl_gene_id: Slip_0089
symbol: Slip_0089
gene_biotype: protein_coding
description:
  KEGG: tpd:Teth39_1351 TPR repeat-containing protein; SPTR: B0KA42 Tetratricopeptide TPR_2 repeat protein; manually curated.


ensembl_gene_id: Slip_0090
symbol: Slip_0090
gene_biotype: protein_coding
description:
  COGs: COG5015 conserved hypothetical protein; InterPro IPR009002:IPR011576; KEGG: cth:Cthe_1495 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: B0AC86 Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Slip_0091
symbol: Slip_0091
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: pth:PTH_0039 peptide ABC transporter permease; PFAM: protein of unknown function DUF214; SPTR: A5D699 ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.


ensembl_gene_id: Slip_0092
symbol: Slip_0092
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cag:Cagg_0009 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8GBL5 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_0093
symbol: Slip_0093
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mta:Moth_2355 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q2RFZ9 Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.


ensembl_gene_id: Slip_0094
symbol: Slip_0094
gene_biotype: protein_coding
description:
  COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: dae:Dtox_4152 outer membrane protein-like protein; PFAM: outer membrane efflux protein; SPTR: C8VYU9 Outer membrane protein-like protein; PFAM: Outer membrane efflux protein.


ensembl_gene_id: Slip_0095
symbol: Slip_0095
gene_biotype: protein_coding
description:
  PepSY-associated TM helix domain protein; InterPro IPR005625; KEGG: pth:PTH_0040 hypothetical protein; PFAM: PepSY-associated TM helix domain protein; SPTR: A5D6A0 Hypothetical membrane protein; PFAM: PepSY-associated TM helix.


ensembl_gene_id: Slip_0096
symbol: Slip_0096
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR003660:IPR 003661:IPR003594:IPR004358:IPR009082:IPR013767; KEGG: pth:PTH_2684 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; SPTR: A5CYR2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: HAMP d [...]


ensembl_gene_id: Slip_0097
symbol: Slip_0097
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: pth:PTH_2685 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A5CYR3 Response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB.


ensembl_gene_id: Slip_0098
symbol: Slip_0098
gene_biotype: protein_coding
description:
  Coenzyme A transferase; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165; KEGG: dae:Dtox_1906 coenzyme A transferase; PFAM: coenzyme A transferase; SPTR: C8VXU1 Coenzyme A transferase; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_0099
symbol: Slip_0099
gene_biotype: protein_coding
description:
  Glutaconate CoA-transferase; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165; KEGG: dae:Dtox_1907 coenzyme A transferase; PFAM: coenzyme A transferase; PRIAM: Glutaconate CoA-transferase; SPTR: C8VXU2 Coenzyme A transferase; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_0100
symbol: Slip_0100
gene_biotype: protein_coding
description:
  Stage II sporulation protein R; InterPro IPR014202; KEGG: swo:Swol_0063 pro-sigma-E processing factor spoIIR; PFAM: Sporulation stage II protein R; SPTR: Q0B0T3 Pro-sigma-E processing factor spoIIR; TIGRFAM: stage II sporulation protein R; PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R.


ensembl_gene_id: Slip_0101
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: Slip_0102
symbol: Slip_0102
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR000485:IPR011991:IPR011711; KEGG: dae:Dtox_0202 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C8W2Z9 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.


ensembl_gene_id: Slip_0104
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: Slip_0105
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Slip_0106
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Slip_0108
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Slip_0109
symbol: Slip_0109
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; COGs: COG2002 Regulators of stationary/sporulation gene expression; InterPro IPR014213:IPR007159:IPR003018:IPR006339; KEGG: hmo:HM1_0719 stage V sporulation protein T, AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; GAF domain protein; SPTR: B0TBA9 Stage v sporulation protein t, abrb family transcriptional regulator; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T.


ensembl_gene_id: Slip_0110
symbol: Slip_0110
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: swo:Swol_0081 stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; SPTR: Q0B0R6 Stage V sporulation protein B; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B.


ensembl_gene_id: Slip_0111
symbol: Slip_0111
gene_biotype: protein_coding
description:
  MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR011551; KEGG: swo:Swol_0082 MazG protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: Q0B0R5 MazG protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.


ensembl_gene_id: Slip_0112
symbol: Slip_0112
gene_biotype: protein_coding
description:
  Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Slip_0113
symbol: Slip_0113
gene_biotype: protein_coding
description:
  RNA-binding S4 domain protein; COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: swo:Swol_0084 hypothetical protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Q0B0R3 Putative uncharacterized protein; PFAM: S4 domain.


ensembl_gene_id: Slip_0114
symbol: Slip_0114
gene_biotype: protein_coding
description:
  Sporulation protein YabP; InterPro IPR012504; KEGG: swo:Swol_0085 hypothetical protein; PFAM: YabP family protein; SPTR: Q0B0R2 Putative uncharacterized protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family; TIGRFAM: sporulation protein YabP.


ensembl_gene_id: Slip_0115
symbol: Slip_0115
gene_biotype: protein_coding
description:
  Spore cortex biosynthesis protein, YabQ; InterPro IPR019074; KEGG: swo:Swol_0086 hypothetical protein; PFAM: Spore cortex biosynthesis protein, YabQ-like; SPTR: Q0B0R1 Putative uncharacterized protein; PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ.


ensembl_gene_id: Slip_0116
symbol: Slip_0116
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; InterPro IPR000792:IPR016032:IPR011991:IPR013249; KEGG: pth:PTH_0187 DNA-binding HTH domain-containing proteins; PFAM: Sigma-70 region 4 type 2; SPTR: A5D5W8 DNA-binding HTH domain-containing proteins; PFAM: Sigma-70, region 4.


ensembl_gene_id: Slip_0117
symbol: Slip_0117
gene_biotype: protein_coding
description:
  Septum formation initiator; InterPro IPR007060; KEGG: dau:Daud_0082 septum formation initiator; PFAM: Septum formation initiator; SPTR: B1I189 Septum formation initiator; PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL.


ensembl_gene_id: Slip_0118
symbol: Slip_0118
gene_biotype: protein_coding
description:
  COGs: COG1098 RNA binding protein (contains ribosomal protein S1 domain); InterPro IPR003029:IPR016027:IPR012340; KEGG: swo:Swol_0089 RNA binding S1; PFAM: RNA binding S1 domain protein; SPTR: Q0B0Q8 RNA binding S1; PFAM: S1 RNA binding domain.


ensembl_gene_id: Slip_0119
symbol: Slip_0119
gene_biotype: protein_coding
description:
  COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: swo:Swol_0090 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Q0B0Q7 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase family.


ensembl_gene_id: Slip_0120
symbol: Slip_0120
gene_biotype: protein_coding
description:
  Biotin and thiamin synthesis associated; COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR013785:IPR007197:IPR010722; KEGG: dae:Dtox_0182 biotin and thiamin synthesis associated; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SPTR: C8W2Y1 Biotin and thiamin synthesis associated; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH.


ensembl_gene_id: Slip_0121
symbol: Slip_0121
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0502 Biotin synthase; InterPro IPR006638:IPR005244:IPR013785:IPR007197; KEGG: csc:Csac_0491 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A1HRP0 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_0123
symbol: Slip_0123
gene_biotype: protein_coding
description:
  COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336:IPR012335; KEGG: swo:Swol_1829 Fe-hydrogenase, gamma subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: Q0AVX7 Fe-hydrogenase, gamma subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit.


ensembl_gene_id: Slip_0124
symbol: Slip_0124
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR001949:IPR011538:IPR019554:IPR019575; KEGG: swo:Swol_1024 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: Q0AY66 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.


ensembl_gene_id: Slip_0125
symbol: Slip_0125
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR001041:IPR017896:IPR017900:IPR000283:IPR 009016:IPR003149:IPR019574:IPR001450:IPR004108:IPR013352; KEGG: swo:Swol_1017 iron hydrogenase, small subunit; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; SPTR: Q0AY73 Iron hydrogenase, small subunit; TIGRFAM: hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-termi [...]


ensembl_gene_id: Slip_0126
symbol: Slip_0126
gene_biotype: protein_coding
description:
  Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932:IPR010822:IPR014221; KEGG: swo:Swol_0093 phosphoprotein phosphatase; PFAM: Stage II sporulation E family protein; PRIAM: Phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: Q0B0Q4 Phosphoprotein phosphatase; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E.


ensembl_gene_id: Slip_0127
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Slip_0128
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Slip_0129
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Slip_0130
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR020628:IPR000559; KEGG: swo:Swol_1409 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Q0AX38 Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase.


ensembl_gene_id: Slip_0131
symbol: Slip_0131
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; InterPro IPR003607:IPR006674; KEGG: swo:Swol_0096 HD superfamily hydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0B0Q1 HD superfamily hydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_0132
symbol: Slip_0132
gene_biotype: protein_coding
description:
  COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489:IPR011005:IPR006390; KEGG: swo:Swol_0097 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: Q0B0Q0 Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase.


ensembl_gene_id: Slip_0133
symbol: Slip_0133
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: Slip_0134
symbol: Slip_0134
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: pth:PTH_0205 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase; SPTR: A5D5V5 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4 [...]


ensembl_gene_id: Slip_0135
symbol: Slip_0135
gene_biotype: protein_coding
description:
  Domain of unknown function DUF2520; COGs: COG5495 conserved hypothetical protein; InterPro IPR016040:IPR019665:IPR018931; KEGG: swo:Swol_0100 NADP oxidoreductase, coenzyme F420-dependent; PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; SPTR: Q0B0P7 NADP oxidoreductase, coenzyme F420-dependent; PFAM: Domain of unknown function (DUF2520); Rossmann-like domain.


ensembl_gene_id: Slip_0136
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoatehydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Slip_0137
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Slip_0138
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Slip_0139
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Slip_0141
symbol: Slip_0141
gene_biotype: protein_coding
description:
  COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638:IPR013785:IPR004393; KEGG: swo:Swol_0107 nicotinate-nucleotide diphosphorylase (carboxylating); PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Q0B0P1 Nicotinate-nucleotide pyrophosphorylase (Carboxylating); TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ [...]


ensembl_gene_id: Slip_0142
symbol: Slip_0142
gene_biotype: protein_coding
description:
  BioY protein; COGs: COG1268 conserved hypothetical protein; InterPro IPR005829:IPR003784; KEGG: dae:Dtox_0243 BioY protein; PFAM: BioY protein; SPTR: C8W3U2 BioY protein; PFAM: BioY family.


ensembl_gene_id: Slip_0143
symbol: Slip_0143
gene_biotype: protein_coding
description:
  Peptidase S58 DmpA; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR016117:IPR005321; KEGG: cno:NT01CX_1082 T4 family peptidase; PFAM: peptidase S58 DmpA; SPTR: C5VRG3 Peptidase family T4; PFAM: Peptidase family S58.


ensembl_gene_id: Slip_0144
symbol: coaX
gene_biotype: protein_coding
description:
  Transcriptional activator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Slip_0145
symbol: Slip_0145
gene_biotype: protein_coding
description:
  TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Slip_0146
symbol: Slip_0146
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: swo:Swol_0111 hypothetical protein; PFAM: helix-turn-helix domain protein; SPTR: Q0B0N7 Putative uncharacterized protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Slip_0149
symbol: greA
gene_biotype: protein_coding
description:
  GreA/GreB family elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Slip_0150
symbol: lysS
gene_biotype: protein_coding
description:
  COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR006195:IPR018149:IPR016027:IPR012340:IPR 004365:IPR004364:IPR002313; KEGG: swo:Swol_0116 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Q0B0N3 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase-related protein GenX; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Slip_0151
symbol: Slip_0151
gene_biotype: protein_coding
description:
  InterPro IPR002218; KEGG: lsp:Bsph_2834 hypothetical protein; PFAM: glucose-inhibited division protein A; SPTR: B1HMK1 Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Slip_0153
symbol: Slip_0153
gene_biotype: protein_coding
description:
  Membrane bound O-acyl transferase MBOAT family protein; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: azc:AZC_2811 membrane bound O-acyl transferase; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: C5ELZ0 Alginate O-acetylation protein algI; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: Slip_0154
symbol: Slip_0154
gene_biotype: protein_coding
description:
  Lipolytic protein G-D-S-L family; InterPro IPR013830:IPR013831:IPR001087; KEGG: pth:PTH_1215 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: A5D2X4 Putative uncharacterized protein.


ensembl_gene_id: Slip_0155
symbol: Slip_0155
gene_biotype: protein_coding
description:
  Polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; InterPro IPR007345:IPR019896; KEGG: drm:Dred_3108 polysaccharide pyruvyl transferase; PFAM: polysaccharide pyruvyl transferase; SPTR: A4J957 Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; manually curated; PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB.


ensembl_gene_id: Slip_0156
symbol: Slip_0156
gene_biotype: protein_coding
description:
  InterPro IPR000215; KEGG: drm:Dred_3109 hypothetical protein; SPTR: A4J958 Putative uncharacterized protein.


ensembl_gene_id: Slip_0157
symbol: Slip_0157
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0150; COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: pth:PTH_2874 hypothetical protein; PFAM: protein of unknown function UPF0150; SPTR: A5CY65 Uncharacterized conserved protein; PFAM: Uncharacterised protein family (UPF0150).


ensembl_gene_id: Slip_0158
symbol: Slip_0158
gene_biotype: protein_coding
description:
  Glycosyl transferase, family 4, conserved region; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: swo:Swol_0124 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Q0B0M5 Glycosyl transferase, family 4; PFAM: Glycosyl transferase family 4.


ensembl_gene_id: Slip_0159
symbol: Slip_0159
gene_biotype: protein_coding
description:
  Cell envelope-related transcriptional attenuator; COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: swo:Swol_0125 putative transcriptional regulator; PFAM: cell envelope-related transcriptional attenuator; SPTR: Q0B0M4 Putative transcriptional regulator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.


ensembl_gene_id: Slip_0160
symbol: Slip_0160
gene_biotype: protein_coding
description:
  O-antigen polymerase; InterPro IPR019734:IPR011990:IPR007016; KEGG: swo:Swol_0127 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Q0B0M2 Putative uncharacterized protein; PFAM: O-Antigen ligase.


ensembl_gene_id: Slip_0161
symbol: Slip_0161
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869; KEGG: swo:Swol_0128 hypothetical protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Q0B0M1 Putative uncharacterized protein; manually curated; PFAM: Polysaccharide biosynthesis protein.


ensembl_gene_id: Slip_0162
symbol: Slip_0162
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfr:BF1109 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q9RGI9 Putative glycosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Slip_0163
symbol: Slip_0163
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869:IPR013692; KEGG: drm:Dred_3033 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; Polysaccharide biosynthesis domain protein; SPTR: A4J8Y3 Polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein C-terminal.


ensembl_gene_id: Slip_0164
symbol: Slip_0164
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterProIPR000888:IPR016040:IPR011051:IPR014710:IPR 001509; KEGG: drm:Dred_3032 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A4J8Y2 NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; WxcM-like, C-terminal.


ensembl_gene_id: Slip_0165
symbol: Slip_0165
gene_biotype: protein_coding
description:
  COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: sha:SH0394 capsular polysaccharide synthesis enzyme CapG; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: C6JQH6 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase.


ensembl_gene_id: Slip_0166
symbol: Slip_0166
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cpi:Cpin_1085 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Q7P738 Glycosyltransferase; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Slip_0167
symbol: Slip_0167
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cpy:Cphy_3501 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B0N0E8 Putative uncharacterized protein; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Slip_0169
symbol: Slip_0169
gene_biotype: protein_coding
description:
  Sulfatase; InterPro IPR017850:IPR017849:IPR000917; KEGG: eel:EUBELI_00105 hypothetical protein; PFAM: sulfatase; SPTR: C0FUW0 Putative uncharacterized protein; PFAM: Sulfatase.


ensembl_gene_id: Slip_0172
symbol: Slip_0172
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate galactose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: dtu:Dtur_0586 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: B8DZE1 Undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase.


ensembl_gene_id: Slip_0173
symbol: Slip_0173
gene_biotype: protein_coding
description:
  Protein of unknown function DUF201; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR011761:IPR003806; KEGG: aba:Acid345_3820 carbamoyl phosphate synthase-like protein; PFAM: protein of unknown function DUF201; SPTR: Q1IJY0 Putative uncharacterized protein; PFAM: ATP-grasp domain.


ensembl_gene_id: Slip_0174
symbol: Slip_0174
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 1; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833:IPR005834:IPR006439; KEGG: aba:Acid345_3819 haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q1IJY1 Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: Slip_0175
symbol: Slip_0175
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422; KEGG: gwc:GWCH70_3253 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C5D944 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Slip_0180
symbol: Slip_0180
gene_biotype: protein_coding
description:
  COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: afl:Aflv_1615 transcriptional regulator of ParA family, inhibits the initiation of sporulation; SPTR: B7GJW7 Transcriptional regulator of ParA family, inhibits the initiation of sporulation; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_0183
symbol: Slip_0183
gene_biotype: protein_coding
description:
  InterPro IPR002716; KEGG: chy:CHY_1722 PilT domain-containing protein; PFAM: PilT protein domain protein; SPTR: Q3ABE2 PIN domain protein; PFAM: PIN domain.


ensembl_gene_id: Slip_0184
symbol: Slip_0184
gene_biotype: protein_coding
description:
  Transcriptional regulator/antitoxin, MazE; InterPro IPR007159:IPR006339; KEGG: ate:Athe_2482 transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; SPTR: C7IQP3 Transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_0185
symbol: Slip_0185
gene_biotype: protein_coding
description:
  InterPro IPR002716; KEGG: ate:Athe_1987 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: C7IQP4 PilT protein domain protein; PFAM: PIN domain.


ensembl_gene_id: Slip_0186
symbol: Slip_0186
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_0253 AbrB family transcriptional regulator; SPTR: Q2RLV1 Transcriptional regulator, AbrB family.


ensembl_gene_id: Slip_0187
symbol: Slip_0187
gene_biotype: protein_coding
description:
  Band 7 protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR001972; KEGG: adg:Adeg_0942 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: C9RCV1 Band 7 protein; PFAM: SPFH domain / Band 7 family.


ensembl_gene_id: Slip_0188
symbol: Slip_0188
gene_biotype: protein_coding
description:
  Protein of unknown function DUF107; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: adg:Adeg_0941 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: C9RCV0 Putative uncharacterized protein; PFAM: Clp protease; NfeD-like.


ensembl_gene_id: Slip_0189
symbol: Slip_0189
gene_biotype: protein_coding
description:
  COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: pth:PTH_0916 deacetylases; PFAM: histone deacetylase superfamily; SPTR: A5D3S4 Deacetylases; PFAM: Histone deacetylase domain.


ensembl_gene_id: Slip_0190
symbol: vapC
gene_biotype: protein_coding
description:
  PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: Slip_0191
symbol: Slip_0191
gene_biotype: protein_coding
description:
  InterPro IPR007159:IPR006339; KEGG: mta:Moth_2070 AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; SPTR: Q2RGS4 Transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_0194
symbol: Slip_0194
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; InterPro IPR007159:IPR006339; KEGG: pth:PTH_0702 hypothetical protein; PFAM: SpoVT/AbrB domain protein; SPTR: A5D4F2 Putative uncharacterized protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_0195
symbol: Slip_0195
gene_biotype: protein_coding
description:
  InterPro IPR002716; KEGG: adg:Adeg_1056 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: C9RD60 PilT protein domain protein; PFAM: PIN domain.


ensembl_gene_id: Slip_0202
symbol: Slip_0202
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR002347:IPR016040; KEGG: hma:rrnAC3004 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: B9ZHH8 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.


ensembl_gene_id: Slip_0204
symbol: Slip_0204
gene_biotype: protein_coding
description:
  InterPro IPR014942; KEGG: adg:Adeg_0268 domain of unknown function DUF1814; PFAM: Domain of unknown function DUF1814; SPTR: C9RB09 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1814).


ensembl_gene_id: Slip_0208
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: Slip_0209
symbol: Slip_0209
gene_biotype: protein_coding
description:
  DGQHR domain protein; InterPro IPR017601; KEGG: swo:Swol_0746 hypothetical protein; SPTR: Q0AYY6 Putative uncharacterized protein; TIGRFAM: DGQHR domain protein; TIGRFAM: DGQHR domain; DNA sulfur modification protein DndB.


ensembl_gene_id: Slip_0213
symbol: Slip_0213
gene_biotype: protein_coding
description:
  InterPro IPR007159:IPR006339; KEGG: mta:Moth_0253 AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; SPTR: Q2RLV1 Transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Slip_0214
symbol: Slip_0214
gene_biotype: protein_coding
description:
  InterPro IPR002716; KEGG: mta:Moth_0252 PilT protein-like; PFAM: PilT protein domain protein; SPTR: Q2RLV2 PilT protein-like; PFAM: PIN domain.


ensembl_gene_id: Slip_0215
symbol: Slip_0215
gene_biotype: protein_coding
description:
  COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541:IPR017562; KEGG: dsy:DSY2228 cytochrome c biogenesis protein CcsA; PFAM: cytochrome c assembly protein; SPTR: Q24VC5 Probable cytochrome c biogenesis protein CcsA; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.


ensembl_gene_id: Slip_0216
symbol: Slip_0216
gene_biotype: protein_coding
description:
  COGs: COG1333 ResB protein required for cytochrome c biosynthesis; InterPro IPR007816; KEGG: hmo:HM1_1961 cytochrome c biogenesis protein ccsb, putative; PFAM: ResB family protein; SPTR: Q0PIF6 Cytochrome c biogenesis protein resB; PFAM: ResB-like family.


ensembl_gene_id: Slip_0217
symbol: Slip_0217
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR011031:IPR012286; KEGG: ele:Elen_1005 hypothetical protein; SPTR: C4V3C7 Putative uncharacterized protein; PFAM: NapC/NirT cytochrome c family, N-terminal region.


ensembl_gene_id: Slip_0218
symbol: Slip_0218
gene_biotype: protein_coding
description:
  Heptaprenyl diphosphate synthase component I; COGs: COG4769 membrane protein; InterPro IPR014535:IPR010898; KEGG: swo:Swol_1955 heptaprenyl diphosphate synthase component I; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: Q0AVK2 Heptaprenyl diphosphate synthase component I; PFAM: Heptaprenyl diphosphate synthase component I.


ensembl_gene_id: Slip_0219
symbol: Slip_0219
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: swo:Swol_1948 cobalt ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0AVK9 ABC-type transporter, ATPase component (Cobalt transporters subfamily); PFAM: ABC transporter.


ensembl_gene_id: Slip_0220
symbol: Slip_0220
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: swo:Swol_1949 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0AVK8 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal.


ensembl_gene_id: Slip_0221
symbol: Slip_0221
gene_biotype: protein_coding
description:
  COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: swo:Swol_1947 cobalt ABC transporter permease protein; PFAM: cobalt transport protein; SPTR: Q0AVL0 Cobalt ABC transporter permease protein; PFAM: Cobalt transport protein.


ensembl_gene_id: Slip_0222
symbol: Slip_0222
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1312; COGs: COG5341 conserved hypothetical protein; InterPro IPR010739; KEGG: cth:Cthe_0562 hypothetical protein; PFAM: protein of unknown function DUF1312; SPTR: A3DCW9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1312).


ensembl_gene_id: Slip_0223
symbol: Slip_0223
gene_biotype: protein_coding
description:
  COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR013027:IPR003953; KEGG: lpl:lp_3125 fumarate reductase, flavoprotein subunit precursor, N-terminally truncated; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Q88T61 Fumarate reductase, flavoprotein subunit, N-terminally truncated; PFAM: FAD binding domain.


ensembl_gene_id: Slip_0224
symbol: Slip_0224
gene_biotype: protein_coding
description:
  Sigma54 specific transcriptional regulator, Fis family; COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism; InterProIPR002078:IPR003593:IPR020441:IPR009057:IPR 002197; KEGG: dsy:DSY4719 hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Q24N84 Putative uncharacterized protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: Slip_0226
symbol: Slip_0226
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: chy:CHY_2239 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: Q3A9Y6 ABC transporter, permease protein; PFAM: Predicted permease.


ensembl_gene_id: Slip_0227
symbol: Slip_0227
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: dae:Dtox_1572 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C8VW80 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_0228
symbol: Slip_0228
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: dae:Dtox_1571 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: C8VW79 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Slip_0229
symbol: Slip_0229
gene_biotype: protein_coding
description:
  KEGG: adg:Adeg_1986 hypothetical protein; SPTR: C9R9T6 Putative uncharacterized protein; PFAM: Yip1 domain.


ensembl_gene_id: Slip_0231
symbol: Slip_0231
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mta:Moth_2319 DNA polymerase, beta-like region; SPTR: Q2RG33 DNA polymerase, beta-like region.


ensembl_gene_id: Slip_0232
symbol: Slip_0232
gene_biotype: protein_coding
description:
  COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR018170:IPR020471:IPR001395; KEGG: tpt:Tpet_1742 2,5-didehydrogluconate reductase; PFAM: aldo/keto reductase; PRIAM: Aldehyde reductase; SPTR: C6Q5Q0 2,5-didehydrogluconate reductase; PFAM: Aldo/keto reductase family.


ensembl_gene_id: Slip_0233
symbol: Slip_0233
gene_biotype: protein_coding
description:
  Iron-containing alcohol dehydrogenase; COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR018211:IPR001670; KEGG: chy:CHY_1708 NADH-dependent butanol dehydrogenase A; PFAM: iron-containing alcohol dehydrogenase; SPTR: Q3ABF6 NADH-dependent butanol dehydrogenase A; PFAM: Iron-containing alcohol dehydrogenase.


ensembl_gene_id: Slip_0235
symbol: Slip_0235
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterProIPR001647:IPR009057:IPR011075:IPR012287:IPR 015893; KEGG: hmo:HM1_0881 transcriptional regulator, TetR family, putative; PFAM: regulatory protein TetR; SPTR: B0TAN2 Transcriptional regulator, tetr family, putative; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Slip_0236
symbol: Slip_0236
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR000412:IPR013525; KEGG: drm:Dred_3063 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: A4J912 ABC-2 type transporter; PFAM: ABC-2 type transporter.


ensembl_gene_id: Slip_0237
symbol: Slip_0237
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: pth:PTH_2802 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A5CYD2 Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Slip_0238
symbol: Slip_0238
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: drm:Dred_3060 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: A4J909 Secretion protein HlyD family protein; PFAM: HlyD family secretion protein.


ensembl_gene_id: Slip_0239
symbol: Slip_0239
gene_biotype: protein_coding
description:
  YbaK/prolyl-tRNA synthetase associated region; COGs: COG2606 conserved hypothetical protein; InterPro IPR007214; KEGG: cdl:CDR20291_0909 putative regulatory protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: C1PCK8 YbaK/prolyl-tRNA synthetase associated region; PFAM: YbaK / prolyl-tRNA synthetases associated domain.


ensembl_gene_id: Slip_0240
symbol: Slip_0240
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR001387:IPR010982; KEGG: chy:CHY_1862 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q3AB02 DNA-binding protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Slip_0242
symbol: Slip_0242
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1592 Rubrerythrin; InterProIPR004039:IPR009040:IPR009078:IPR012347:IPR 003251; KEGG: drm:Dred_2212 rubrerythrin; PFAM: Rubrerythrin; SPTR: A4J6M4 Rubrerythrin; PFAM: Rubrerythrin.


ensembl_gene_id: Slip_0243
symbol: thiE
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine kinase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: Slip_0244
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: Slip_0245
symbol: Slip_0245
gene_biotype: protein_coding
description:
  COGs: COG0031 Cysteine synthase; InterPro IPR001216:IPR001926:IPR005856:IPR005859; KEGG: mta:Moth_1706 cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Q2RHT1 Cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: Slip_0246
symbol: Slip_0246
gene_biotype: protein_coding
description:
  Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR017871:IPR000802:IPR004680; KEGG: swo:Swol_2091 arsenic transporter family protein; PFAM: Citrate transporter; SPTR: Q0AV71 Arsenic transporter family protein; PFAM: Citrate transporter.


ensembl_gene_id: Slip_0247
symbol: Slip_0247
gene_biotype: protein_coding
description:
  KEGG: dtu:Dtur_1646 hypothetical protein; SPTR: B4VVF2 Caspase domain protein; PFAM: Domain of unknown function (DUF1795).


ensembl_gene_id: Slip_0249
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: Slip_0250
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Slip_0251
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: Slip_0252
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: Slip_0253
symbol: nuoH
gene_biotype: protein_coding
description:
  Respiratory-chain NADH dehydrogenase subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: Slip_0254
symbol: nuoI
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Slip_0255
symbol: Slip_0255
gene_biotype: protein_coding
description:
  NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Slip_0256
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: Slip_0257
symbol: Slip_0257
gene_biotype: protein_coding
description:
  Proton-translocating NADH-quinone oxidoreductase, chain L; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR002160:IPR003916:IPR018393:IPR001516:IPR 001750:IPR003945; KEGG: chy:CHY_1417 proton-translocating NADH-quinone oxidoreductase, L subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Q3AC85 Proton-translocating NADH-quinone oxidoreductase, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ub [...]


ensembl_gene_id: Slip_0258
symbol: Slip_0258
gene_biotype: protein_coding
description:
  Proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR003918:IPR001750:IPR010227; KEGG: chy:CHY_1416 proton-translocating NADH-quinone oxidoreductase, M subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Q3AC86 Proton-translocating NADH-quinone oxidoreductase, M subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.


ensembl_gene_id: Slip_0259
symbol: nuoN
gene_biotype: protein_coding
description:
  Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: Slip_0260
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: Slip_0261
symbol: Slip_0261
gene_biotype: protein_coding
description:
  COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR016040:IPR001509:IPR005886; KEGG: mta:Moth_0673 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q2RKP1 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: Slip_0262
symbol: Slip_0262
gene_biotype: protein_coding
description:
  COGs: COG0668 Small-conductance mechanosensitive channel; InterProIPR006686:IPR010920:IPR011066:IPR011014:IPR 006685; KEGG: pth:PTH_0619 small-conductance mechanosensitive channel; PFAM: MscS Mechanosensitive ion channel; SPTR: A5D4L6 Small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel.


ensembl_gene_id: Slip_0263
symbol: Slip_0263
gene_biotype: protein_coding
description:
  Capsule synthesis protein, CapA; COGs: COG2843 Putative protein of poly-gamma-glutamate biosynthesis (capsule formation); InterPro IPR001969:IPR019079; KEGG: sth:STH526 hypothetical protein; PFAM: Capsule synthesis protein, CapA; SPTR: Q67S32 Putative uncharacterized protein; PFAM: Bacterial capsule synthesis protein PGA_cap.


ensembl_gene_id: Slip_0264
symbol: Slip_0264
gene_biotype: protein_coding
description:
  Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992:IPR003004:IPR018076; KEGG: mta:Moth_1552 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Q2RI78 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Slip_0265
symbol: Slip_0265
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR000983:IPR012902; KEGG: pjd:Pjdr2_2101 hypothetical protein; SPTR: C6Q646 Tfp pilus assembly protein PilE-like protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_0266
symbol: Slip_0266
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR001120:IPR012902; KEGG: swo:Swol_0535 hypothetical protein; SPTR: A1HQ18 Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_0267
symbol: Slip_0267
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR001120:IPR012902; KEGG: dae:Dtox_2703 hypothetical protein; SPTR: C8W186 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_0268
symbol: Slip_0268
gene_biotype: protein_coding
description:
  Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR003646:IPR002508:IPR001452:IPR013247; KEGG: drm:Dred_2693 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; SMART: cell wall hydrolase/autolysin; SH3 domain protein; SPTR: A4J7Z6 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; Bacterial SH3 domain.


ensembl_gene_id: Slip_0269
symbol: Slip_0269
gene_biotype: protein_coding
description:
  InterPro IPR002145; KEGG: tte:TTE2583 hypothetical protein; PFAM: CopG domain protein DNA-binding domain protein; SPTR: Q8R741 Putative uncharacterized protein; PFAM: Ribbon-helix-helix protein, copG family.


ensembl_gene_id: Slip_0270
symbol: Slip_0270
gene_biotype: protein_coding
description:
  S-layer domain protein; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR001119:IPR017313:IPR000209:IPR008979; KEGG: mta:Moth_2364 peptidase S8 and S53, subtilisin, kexin, sedolisin; PFAM: S-layer domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Q2RFZ3 Peptidase S8 and S53, subtilisin, kexin, sedolisin; PFAM: S-layer homology domain; Subtilase family.


ensembl_gene_id: Slip_0271
symbol: Slip_0271
gene_biotype: protein_coding
description:
  COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: drm:Dred_0596 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: Q39TH9 Amidohydrolase 2; PFAM: Amidohydrolase.


ensembl_gene_id: Slip_0272
symbol: Slip_0272
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR002731:IPR008275; KEGG: drm:Dred_1279 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; PRIAM: Benzoyl-CoA reductase; SPTR: A4J410 Putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: Slip_0273
symbol: Slip_0273
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: swo:Swol_0412 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: Q0AZV4 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Slip_0274
symbol: Slip_0274
gene_biotype: protein_coding
description:
  KEGG: cbo:CBO3243 hypothetical protein; SPTR: C0C4K8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3343).


ensembl_gene_id: Slip_0276
symbol: Slip_0276
gene_biotype: protein_coding
description:
  Cysteine desulfurase family protein; COGs: COG0520 Selenocysteine lyase; InterProIPR020578:IPR015424:IPR015421:IPR000192:IPR 010969; KEGG: swo:Swol_1912 selenocysteine lyase; PFAM: aminotransferase class V; SPTR: Q0AVP5 Selenocysteine lyase; TIGRFAM: cysteine desulfurase family protein; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein.


ensembl_gene_id: Slip_0277
symbol: Slip_0277
gene_biotype: protein_coding
description:
  Selenium metabolism protein YedF; InterPro IPR001455:IPR019870; KEGG: swo:Swol_1887 SirA-like protein; PFAM: SirA family protein; SPTR: Q0AVR9 SirA-like protein; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Slip_0279
symbol: Slip_0279
gene_biotype: protein_coding
description:
  Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR020583:IPR020550:IPR000760; KEGG: tye:THEYE_A1035 inositol-1-monophosphatase; PFAM: inositol monophosphatase; SPTR: B5YKU8 Inositol-1-monophosphatase; PFAM: Inositol monophosphatase family.


ensembl_gene_id: Slip_0281
symbol: Slip_0281
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR001411:IPR016196:IPR011701; KEGG: pth:PTH_0106 arabinose efflux permease; PFAM: major facilitator superfamily MFS_1; SPTR: A5D626 Arabinose efflux permease; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Slip_0282
symbol: Slip_0282
gene_biotype: protein_coding
description:
  Putative sigma54 specific transcriptional regulator; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR000014:IPR000700:IPR000644:IPR 003593:IPR009057:IPR012287:IPR013767; KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; SMART: CBS domain containing protein; PAS domain containing protein; AAA ATPase; SPTR: Q0AWW3 Sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFA [...]


ensembl_gene_id: Slip_0284
symbol: Slip_0284
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: drm:Dred_0400 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A4J1J5 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_0285
symbol: Slip_0285
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR013328:IPR006176:IPR 006108; KEGG: swo:Swol_1485 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: Q0AWW5 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Slip_0286
symbol: Slip_0286
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006089:IPR009100:IPR009075:IPR013786:IPR 006091:IPR013764:IPR006092:IPR006090; KEGG: swo:Swol_1483 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q0AWW7 Butyryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_0288
symbol: Slip_0288
gene_biotype: protein_coding
description:
  Glutaconate CoA-transferase; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165; KEGG: swo:Swol_1481 glutaconate CoA-transferase; PFAM: coenzyme A transferase; PRIAM: Glutaconate CoA-transferase; SPTR: Q0AWW8 Glutaconate CoA-transferase; PFAM: Coenzyme A transferase.


ensembl_gene_id: Slip_0290
symbol: Slip_0290
gene_biotype: protein_coding
description:
  Proposed homoserine kinase; COGs: COG3635 phosphoglycerate mutase AP superfamily; InterProIPR004456:IPR017850:IPR019304:IPR006124:IPR 013371; KEGG: pth:PTH_1598 phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: A5D1T5 Predicted phosphoglycerate mutase; TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phos [...]


ensembl_gene_id: Slip_0291
symbol: Slip_0291
gene_biotype: protein_coding
description:
  Spore germination protein; InterPro IPR004761; KEGG: pth:PTH_1839 hypothetical protein; PFAM: Spore germination protein; SPTR: A5D161 Hypothetical membrane protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).


ensembl_gene_id: Slip_0292
symbol: Slip_0292
gene_biotype: protein_coding
description:
  Germination protein, Ger(x)C family; InterPro IPR008844; KEGG: swo:Swol_0077 hypothetical protein; PFAM: spore germination B3 GerAC family protein; SPTR: Q0B0S0 Putative uncharacterized protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.


ensembl_gene_id: Slip_0297
symbol: Slip_0297
gene_biotype: protein_coding
description:
  Spore germination protein; InterPro IPR004761; KEGG: swo:Swol_0079 hypothetical protein; PFAM: Spore germination protein; SPTR: Q0B0R8 Putative uncharacterized protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).


ensembl_gene_id: Slip_0298
symbol: Slip_0298
gene_biotype: protein_coding
description:
  InterPro IPR004995; KEGG: swo:Swol_0078 germination protein; PFAM: GerA spore germination protein; SPTR: Q0B0R9 Germination protein; PFAM: Bacillus/Clostridium GerA spore germination protein.


ensembl_gene_id: Slip_0302
symbol: Slip_0302
gene_biotype: protein_coding
description:
  Molecular chaperone-like protein; COGs: COG0443 Molecular chaperone; KEGG: swo:Swol_0386 molecular chaperone-like protein; SPTR: Q0AZY0 Molecular chaperone-like protein; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.


ensembl_gene_id: Slip_0303
symbol: Slip_0303
gene_biotype: protein_coding
description:
  Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: swo:Swol_2049 uncharacterized membrane protein; PFAM: Rhomboid family protein; SPTR: Q0AVB1 Uncharacterized membrane protein; PFAM: Rhomboid family.


ensembl_gene_id: Slip_0305
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: Slip_0308
symbol: Slip_0308
gene_biotype: protein_coding
description:
  Aminotransferase class V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR015424:IPR015421:IPR000192; KEGG: mta:Moth_1652 aminotransferase, class V; PFAM: aminotransferase class V; SPTR: A1HU92 Aminotransferase, class V; PFAM: Aminotransferase class-V.


ensembl_gene_id: Slip_0309
symbol: Slip_0309
gene_biotype: protein_coding
description:
  Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: drm:Dred_0763 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: A4J2J8 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator).


ensembl_gene_id: Slip_0311
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: Slip_0312
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Slip_0313
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Slip_0314
symbol: Slip_0314
gene_biotype: protein_coding
description:
  Sigma 54 interacting domain protein; COGs: COG1067 ATP-dependent protease; InterProIPR002078:IPR003593:IPR008268:IPR001984:IPR 020568:IPR003959:IPR008269:IPR014251; KEGG: hor:Hore_14920 sporulation protease LonB; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: AAA ATPase; SPTR: B8CY72 Sporulation protease LonB; TIGRFAM: ATP-dependent protease LonB; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative AT [...]


ensembl_gene_id: Slip_0315
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Slip_0316
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Slip_0317
symbol: Slip_0317
gene_biotype: protein_coding
description:
  COGs: COG2313 Uncharacterized protein involved in pigment biosynthesis; InterPro IPR007342; KEGG: rce:RC1_0645 indigoidine synthase A like protein; SPTR: B0G4Q9 Putative uncharacterized protein; PFAM: Indigoidine synthase A like protein.


ensembl_gene_id: Slip_0318
symbol: Slip_0318
gene_biotype: protein_coding
description:
  COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR000257; KEGG: swo:Swol_0417 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); SPTR: Q0AZU9 Uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: Slip_0319
symbol: Slip_0319
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: swo:Swol_0410 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: Q0AZV6 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Slip_0320
symbol: Slip_0320
gene_biotype: protein_coding
description:
  COGs: COG4475 conserved hypothetical protein; InterPro IPR006340; KEGG: sth:STH78 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q67TD0 UPF0340 protein STH78; PFAM: Protein of unknown function (DUF436); TIGRFAM: conserved hypothetical protein TIGR01440; Belongs to the UPF0340 family.


ensembl_gene_id: Slip_0321
symbol: Slip_0321
gene_biotype: protein_coding
description:
  PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173:IPR011611; KEGG: tne:Tneu_0070 ribokinase-like domain-containing protein; PFAM: PfkB domain protein; SPTR: B0NFD1 Putative uncharacterized protein; PFAM: pfkB family carbohydrate kinase.


ensembl_gene_id: Slip_0322
symbol: Slip_0322
gene_biotype: protein_coding
description:
  Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: str:Sterm_3044 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: B0NFD0 Putative uncharacterized protein; PFAM: family.


ensembl_gene_id: Slip_0323
symbol: Slip_0323
gene_biotype: protein_coding
description:
  COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759; KEGG: cth:Cthe_2784 cobalamin B12-binding protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; SPTR: B4BCQ7 Cobalamin B12-binding domain protein; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain.


ensembl_gene_id: Slip_0324
symbol: Slip_0324
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: aac:Aaci_0260 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B0NFD3 Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Slip_0325
symbol: Slip_0325
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: tnp:Tnap_1794 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: B0NFD2 Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Slip_0327
symbol: Slip_0327
gene_biotype: protein_coding
description:
  Ig domain protein group 2 domain protein; InterPro IPR008930:IPR003343:IPR001119; KEGG: mta:Moth_1459 Ig-like, group 2; PFAM: Ig domain protein group 2 domain protein; S-layer domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Q2RIH0 Ig-like, group 2; PFAM: S-layer homology domain.


ensembl_gene_id: Slip_0329
symbol: Slip_0329
gene_biotype: protein_coding
description:
  COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: pth:PTH_1480 ABC-type cobalt transport system, permease component CbiQ and related transporters; PFAM: cobalt transport protein; SPTR: A5D260 ABC-type cobalt transport system, permease component CbiQ and related transporters; PFAM: Cobalt transport protein.


ensembl_gene_id: Slip_0330
symbol: Slip_0330
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR017871:IPR003439:IPR003593; KEGG: mta:Moth_1456 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2RIH3 ABC transporter related; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit.


ensembl_gene_id: Slip_0331
symbol: Slip_0331
gene_biotype: protein_coding
description:
  S-layer domain protein; InterPro IPR008930:IPR001330:IPR001119; KEGG: afu:AF1398 hypothetical protein; PFAM: S-layer domain protein; Prenyltransferase/squalene oxidase; SPTR: C8SAK8 Prenyltransferase/squalene oxidase; PFAM: S-layer homology domain.


ensembl_gene_id: Slip_0332
symbol: Slip_0332
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1393; InterPro IPR017196:IPR009825; KEGG: mta:Moth_1455 hypothetical protein; PFAM: protein of unknown function DUF1393; SPTR: Q2RIH4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1393).


ensembl_gene_id: Slip_0333
symbol: Slip_0333
gene_biotype: protein_coding
description:
  Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: dhd:Dhaf_4027 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: B8FT21 Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel.


ensembl_gene_id: Slip_0334
symbol: Slip_0334
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1553 hypothetical protein; SPTR: Q0AWP8 Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_0336
symbol: Slip_0336
gene_biotype: protein_coding
description:
  Protein of unknown function DUF134; COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: dau:Daud_0090 hypothetical protein; PFAM: protein of unknown function DUF134; SPTR: B1I1P6 UPF0251 protein Daud_0090; manually curated; PFAM: Protein of unknown function DUF134.


ensembl_gene_id: Slip_0337
symbol: Slip_0337
gene_biotype: protein_coding
description:
  COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: adg:Adeg_1087 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: C9RD86 Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor.


ensembl_gene_id: Slip_0338
symbol: Slip_0338
gene_biotype: protein_coding
description:
  COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: mta:Moth_1411 dinitrogenase iron-molybdenum cofactor biosynthesis; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Q2RIL5 Dinitrogenase iron-molybdenum cofactor biosynthesis; PFAM: Dinitrogenase iron-molybdenum cofactor.


ensembl_gene_id: Slip_0339
symbol: Slip_0339
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017900:IPR002586:IPR001450:IPR017896; KEGG: dae:Dtox_1234 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C8W5D6 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_0340
symbol: Slip_0340
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017900:IPR002586:IPR001450:IPR017896; KEGG: dae:Dtox_1233 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C8W5D5 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S binding domain.


ensembl_gene_id: Slip_0341
symbol: Slip_0341
gene_biotype: protein_coding
description:
  ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Slip_0343
symbol: Slip_0343
gene_biotype: protein_coding
description:
  Peptidase C1A papain; InterPro IPR000668; KEGG: pst:PSPTO_3000 papain cysteine protease family protein; PFAM: peptidase C1A papain; SMART: peptidase C1A papain; SPTR: A5ZGN9 Putative uncharacterized protein; PFAM: Papain family cysteine protease.


ensembl_gene_id: Slip_0345
symbol: Slip_0345
gene_biotype: protein_coding
description:
  PRC-barrel domain protein; COGs: COG3881 conserved hypothetical protein; InterPro IPR011033:IPR007903; KEGG: swo:Swol_0459 hypothetical protein; PFAM: PRC-barrel domain protein; SPTR: Q0AZR0 Putative uncharacterized protein; PFAM: PRC-barrel domain.


ensembl_gene_id: Slip_0346
symbol: Slip_0346
gene_biotype: protein_coding
description:
  VanW family protein; COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391:IPR011098; KEGG: pth:PTH_0759 hypothetical protein; PFAM: VanW family protein; G5 domain protein; SPTR: A5D499 Uncharacterized vancomycin resistance protein; PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain.


ensembl_gene_id: Slip_0350
symbol: Slip_0350
gene_biotype: protein_coding
description:
  Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR005746:IPR017937:IPR012335:IPR012336:IPR 013766:IPR006662:IPR017936; KEGG: sth:STH2404 thioredoxin; PFAM: Thioredoxin domain; SPTR: Q67LQ7 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.


ensembl_gene_id: Slip_0351
symbol: Slip_0351
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: hmo:HM1_2414 ATPase, putative; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: B0TIM3 ATPase, putative; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA).


ensembl_gene_id: Slip_0352
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: Slip_0353
symbol: Slip_0353
gene_biotype: protein_coding
description:
  PRC-barrel domain protein; InterPro IPR011033:IPR007903; KEGG: swo:Swol_0465 hypothetical protein; PFAM: PRC-barrel domain protein; SPTR: Q0AZQ4 Putative uncharacterized protein; manually curated; PFAM: PRC-barrel domain.


ensembl_gene_id: Slip_0355
symbol: Slip_0355
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549; KEGG: swo:Swol_0467 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Q0AZQ2 Putative uncharacterized protein; PFAM: Domain of unknown function DUF20.


ensembl_gene_id: Slip_0356
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Slip_0357
symbol: Slip_0357
gene_biotype: protein_coding
description:
  Protein of unknown function DUF965; COGs: COG4472 conserved hypothetical protein; InterPro IPR009309; KEGG: swo:Swol_0469 hypothetical protein; PFAM: protein of unknown function DUF965; SPTR: Q0AZQ0 UPF0297 protein Swol_0469; PFAM: Bacterial protein of unknown function (DUF965); Belongs to the UPF0297 family.


ensembl_gene_id: Slip_0358
symbol: Slip_0358
gene_biotype: protein_coding
description:
  COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterProIPR017900:IPR001395:IPR001450:IPR020471:IPR 017896; KEGG: mta:Moth_1641 aldo/keto reductase; PFAM: aldo/keto reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q2RHZ6 Aldo/keto reductase; PFAM: Aldo/keto reductase family.


ensembl_gene_id: Slip_0359
symbol: Slip_0359
gene_biotype: protein_coding
description:
  Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: Slip_0360
symbol: Slip_0360
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1292; InterPro IPR009711; KEGG: swo:Swol_0471 hypothetical protein; PFAM: protein of unknown function DUF1292; SPTR: Q0AZP8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1292); Belongs to the UPF0473 family.


ensembl_gene_id: Slip_0361
symbol: Slip_0361
gene_biotype: protein_coding
description:
  VanW family protein; COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391:IPR011098; KEGG: swo:Swol_0472 hypothetical protein; PFAM: VanW family protein; G5 domain protein; SPTR: Q0AZP7 Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain.


ensembl_gene_id: Slip_0362
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: Slip_0363
symbol: Slip_0363
gene_biotype: protein_coding
description:
  Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: pth:PTH_1069 collagenase and related proteases; PFAM: peptidase U32; SPTR: A5D3C7 Collagenase and related proteases; PFAM: Peptidase family U32.


ensembl_gene_id: Slip_0365
symbol: Slip_0365
gene_biotype: protein_coding
description:
  Phosphate binding protein; COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR011862:IPR006059; KEGG: drm:Dred_2106 phosphate binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: A4J6C0 Phosphate binding protein; TIGRFAM: phosphate binding protein; PFAM: LysR substrate binding domain; TIGRFAM: phosphate binding protein.


ensembl_gene_id: Slip_0366
symbol: Slip_0366
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR018120:IPR012338:IPR005311:IPR001460; KEGG: swo:Swol_0489 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Q0AZN0 Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain.


ensembl_gene_id: Slip_0367
symbol: Slip_0367
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR011991:IPR011006:IPR016032:IPR001789:IPR 001867; KEGG: sas:SAS1621 alkaline phosphatase synthesis transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q8NW62 Alkaline phosphatase synthesis transcriptional regulatory protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, [...]


ensembl_gene_id: Slip_0368
symbol: Slip_0368
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterProIPR000014:IPR003594:IPR009082:IPR003660:IPR 013656:IPR003661:IPR004358:IPR005467; KEGG: pjd:Pjdr2_1502 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; SPTR: C2C319 Sensor protein; TIGRFAM: PAS sensor protein; PFA [...]


ensembl_gene_id: Slip_0369
symbol: Slip_0369
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Slip_0370
symbol: Slip_0370
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, inner membrane subunit PstA; COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR005672:IPR000515; KEGG: cpy:Cphy_1669 phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A9KRG7 Phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA.


ensembl_gene_id: Slip_0371
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: Slip_0373
symbol: Slip_0373
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afo:Afer_0175 ABC transporter related; SPTR: A9DW38 Peptide ABC transporter, ATP-binding protein, putative.


ensembl_gene_id: Slip_0374
symbol: Slip_0374
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: mba:Mbar_A2562 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q469G7 ABC transporter, ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Slip_0375
symbol: Slip_0375
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, inner membrane subunit CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR012809:IPR003339; KEGG: mpd:MCP_1084 putative cobalt ABC transporter permease protein; PFAM: cobalt transport protein; SPTR: C9R9R1 Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.


ensembl_gene_id: Slip_0376
symbol: Slip_0376
gene_biotype: protein_coding
description:
  InterPro IPR020486; KEGG: adg:Adeg_1960 hypothetical protein; SPTR: C9R9R0 Putative uncharacterized protein.


ensembl_gene_id: Slip_0377
symbol: Slip_0377
gene_biotype: protein_coding
description:
  Cobalamin (vitamin B12) biosynthesis CbiM protein; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: dtu:Dtur_1767 cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: B8E0L9 Cobalamin (Vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.


ensembl_gene_id: Slip_0378
symbol: Slip_0378
gene_biotype: protein_coding
description:
  RNA-binding protein, predicted; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019300:IPR019613; KEGG: dae:Dtox_1152 hypothetical protein; PFAM: RNA-binding protein, predicted; Nickel transport complex, NikM subunit, transmembrane; SPTR: C8W4G9 Putative uncharacterized protein; manually curated; PFAM: Nickel uptake substrate-specific transmembrane region; Predicted RNA-binding protein.


ensembl_gene_id: Slip_0379
symbol: Slip_0379
gene_biotype: protein_coding
description:
  COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: dae:Dtox_1669 formylmethanofuran dehydrogenase subunit E region; PFAM: formylmethanofuran dehydrogenase subunit E region; SPTR: A1HNQ6 Formylmethanofuran dehydrogenase, subunit E region; PFAM: FmdE, Molybdenum formylmethanofuran dehydrogenase operon.


ensembl_gene_id: Slip_0381
symbol: Slip_0381
gene_biotype: protein_coding
description:
  COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR003594:IPR005467; KEGG: mta:Moth_1579 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q2RI54 Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Slip_0382
symbol: Slip_0382
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR011006:IPR001789:IPR007492; KEGG: gka:GK1480 transcriptional regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: C6QMV8 Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.


ensembl_gene_id: Slip_0383
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase expression/synthesis HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: Slip_0384
symbol: Slip_0384
gene_biotype: protein_coding
description:
  Hydrogenase accessory protein HypB; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR004392:IPR012202:IPR003495:IPR003593; KEGG: chy:CHY_1541 hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; SMART: AAA ATPase; SPTR: C0GS73 Hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB.


ensembl_gene_id: Slip_0385
symbol: Slip_0385
gene_biotype: protein_coding
description:
  COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR006311:IPR006137:IPR017909; KEGG: chy:CHY_1546 [Ni/Fe] hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Q3ABV6 [Ni/Fe] hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence.


ensembl_gene_id: Slip_0386
symbol: Slip_0386
gene_biotype: protein_coding
description:
  COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: chy:CHY_1545 [Ni/Fe] hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: Q3ABV7 [Ni/Fe] hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase.


ensembl_gene_id: Slip_0387
symbol: Slip_0387
gene_biotype: protein_coding
description:
  COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR000516:IPR016174:IPR011577; KEGG: chy:CHY_1544 [Ni/Fe] hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; SPTR: Q3ABV8 [Ni/Fe] hydrogenase, b-type cytochrome subunit; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit.


ensembl_gene_id: Slip_0388
symbol: Slip_0388
gene_biotype: protein_coding
description:
  COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: pth:PTH_1700 Ni,Fe-hydrogenase maturation factor; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A5D1K9 Ni,Fe-hydrogenase maturation factor; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease.


ensembl_gene_id: Slip_0389
symbol: Slip_0389
gene_biotype: protein_coding
description:
  (NiFe) hydrogenase maturation protein HypF; COGs: COG0068 Hydrogenase maturation factor; InterProIPR004421:IPR017968:IPR017945:IPR001792:IPR 011125:IPR006070; KEGG: gsu:GSU0306 hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; SPTR: Q74GE0 Hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF.


ensembl_gene_id: Slip_0390
symbol: Slip_0390
gene_biotype: protein_coding
description:
  Hydrogenase assembly chaperone hypC/hupF; COGs: COG0298 Hydrogenase maturation factor; InterPro IPR001109; KEGG: dth:DICTH_1788 hydrogenase assembly chaperone HypC/HupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); SPTR: B5YB74 Hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF.


ensembl_gene_id: Slip_0391
symbol: Slip_0391
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein HypD; COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: dhd:Dhaf_3634 hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; SPTR: Q24UM8 Hydrogenase expression/formation protein hypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD.


ensembl_gene_id: Slip_0392
symbol: Slip_0392
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein HypE; COGs: COG0309 Hydrogenase maturation factor; InterPro IPR011854:IPR016188:IPR010918:IPR000728; KEGG: dhd:Dhaf_3633 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; SPTR: Q24UM9 Hydrogenase expression/formation protein hypE; TIGRFAM: hydrogenase expression/formation protein HypE; manually curated; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE.


ensembl_gene_id: Slip_0393
symbol: Slip_0393
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Slip_0394
symbol: Slip_0394
gene_biotype: protein_coding
description:
  HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; COGs: COG2179 hydrolase of the HAD superfamily; InterPro IPR010021:IPR006549:IPR005834; KEGG: swo:Swol_0523 HAD family phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q0AZJ7 HAD-superfamily phosphatase subfamily IIIA; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Protein of unknown function; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668.


ensembl_gene_id: Slip_0395
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: Slip_0396
symbol: Slip_0396
gene_biotype: protein_coding
description:
  Pilin assembly protein; InterPro IPR012902:IPR001120; KEGG: swo:Swol_0525 pilin assembly protein; SPTR: Q0AZJ5 Pilin assembly protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Slip_0397
symbol: Slip_0397
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2179; COGs: COG4843 conserved hypothetical protein; InterPro IPR019264; KEGG: swo:Swol_0526 hypothetical protein; PFAM: Protein of unknown function DUF2179; SPTR: Q0AZJ4 UPF0316 protein Swol_0526; PFAM: Uncharacterized protein conserved in bacteria (DUF2179).


ensembl_gene_id: Slip_0398
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Slip_0399
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Slip_0400
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: Slip_0401
symbol: Slip_0401
gene_biotype: protein_coding
description:
  COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482:IPR003593; KEGG: mta:Moth_1554 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Q2RI76 Type II secretion system protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.


ensembl_gene_id: Slip_0403
symbol: Slip_0403
gene_biotype: protein_coding
description:
  COGs: COG4972 Tfp pilus assembly protein ATPase PilM; KEGG: afw:Anae109_0686 type IV pilus assembly protein PilM; SPTR: A1HQ14 Type IV pilus assembly protein PilM; PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM.


ensembl_gene_id: Slip_0404
symbol: Slip_0404
gene_biotype: protein_coding
description:
  Fimbrial assembly family protein; InterPro IPR007813; KEGG: tbd:Tbd_0203 type IV pilus assembly protein PilN; PFAM: Fimbrial assembly family protein; SPTR: Q3SM93 Type IV pilus assembly protein PilN; PFAM: Fimbrial assembly protein (PilN).


ensembl_gene_id: Slip_0405
symbol: Slip_0405
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pth:PTH_1151 tfp pilus assembly protein PilO; SPTR: Q08Z00 PilO; PFAM: Pilus assembly protein, PilO.


ensembl_gene_id: Slip_0406
symbol: Slip_0406
gene_biotype: protein_coding
description:
  Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: swo:Swol_0542 peptidase U62, modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Q0AZH8 Putative uncharacterized protein; PFAM: Putative modulator of DNA gyrase.


ensembl_gene_id: Slip_0407
symbol: Slip_0407
gene_biotype: protein_coding
description:
  Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: pth:PTH_1159 Zn-dependent protease; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: A5D336 Predicted Zn-dependent protease and their inactivated homologs; PFAM: Putative modulator of DNA gyrase.


ensembl_gene_id: Slip_0408
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Slip_0409
symbol: Slip_0409
gene_biotype: protein_coding
description:
  Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR001131:IPR000994:IPR000587; KEGG: swo:Swol_0545 aminopeptidase P; PFAM: peptidase M24; creatinase; SPTR: Q0AZH5 Aminopeptidase P; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Belongs to the peptidase M24B family.


ensembl_gene_id: Slip_0410
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: Slip_0412
symbol: Slip_0412
gene_biotype: protein_coding
description:
  Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: mta:Moth_0823 hypothetical protein; PFAM: protein of unknown function DUF342; SPTR: Q2RK99 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).


ensembl_gene_id: Slip_0413
symbol: Slip_0413
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: Peptidase family M1 containing protein; SPTR: A3ZU35 Serine protease, subtilase family protein.


ensembl_gene_id: Slip_0414
symbol: Slip_0414
gene_biotype: protein_coding
description:
  Stage III sporulation protein AA; COGs: COG3854 conserved hypothetical protein; InterPro IPR014217:IPR003593; KEGG: swo:Swol_0550 stage III sporulation protein spoIIIAA; SMART: AAA ATPase; SPTR: Q0AZH0 Stage III sporulation protein spoIIIAA; TIGRFAM: stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA.


ensembl_gene_id: Slip_0415
symbol: Slip_0415
gene_biotype: protein_coding
description:
  Sporulation stage III protein AB; InterPro IPR014198; KEGG: swo:Swol_0551 hypothetical protein; PFAM: Sporulation stage III protein AB; SPTR: Q0AZG9 Putative uncharacterized protein; PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.


ensembl_gene_id: Slip_0416
symbol: Slip_0416
gene_biotype: protein_coding
description:
  Stage III sporulation protein AC; InterPro IPR009570; KEGG: swo:Swol_0552 hypothetical protein; PFAM: Stage III sporulation AC family protein; SPTR: Q0AZG8 Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC.


ensembl_gene_id: Slip_0417
symbol: Slip_0417
gene_biotype: protein_coding
description:
  Stage III sporulation protein AD; InterPro IPR014211; KEGG: swo:Swol_0553 putative sporulation protein; PFAM: Sporulation stage III protein AD; SPTR: Q0AZG7 Putative sporulation protein; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.


ensembl_gene_id: Slip_0418
symbol: Slip_0418
gene_biotype: protein_coding
description:
  Stage III sporulation protein AE; InterPro IPR014194; KEGG: swo:Swol_0554 hypothetical protein; PFAM: Sporulation stage III protein AE; SPTR: Q0AZG6 Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.


ensembl_gene_id: Slip_0419
symbol: Slip_0419
gene_biotype: protein_coding
description:
  Sporulation stage III protein AF; InterPro IPR014245; KEGG: swo:Swol_0555 hypothetical protein; PFAM: Sporulation stage III protein AF; SPTR: Q0AZG5 Putative uncharacterized protein; PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF.


ensembl_gene_id: Slip_0420
symbol: Slip_0420
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0556 hypothetical protein; SPTR: Q0AZG4 Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AG.


ensembl_gene_id: Slip_0422
symbol: Slip_0422
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterProIPR001249:IPR001882:IPR019757:IPR013785:IPR 011053:IPR000891:IPR003379:IPR000089; KEGG: swo:Swol_0558 pyruvate carboxylase subunit B; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; SPTR: Q0AZG2 Oxaloacetate decarboxylase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: acetyl-CoA carb [...]


ensembl_gene_id: Slip_0423
symbol: Slip_0423
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Slip_0424
symbol: Slip_0424
gene_biotype: protein_coding
description:
  Protein of unknown function DUF322; COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: swo:Swol_0561 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: Q0AZG0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322).


ensembl_gene_id: Slip_0425
symbol: Slip_0425
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0562 hypothetical protein; SPTR: Q0AZF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322).


ensembl_gene_id: Slip_0426
symbol: Slip_0426
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2273; InterPro IPR018730; KEGG: swo:Swol_0563 hypothetical protein; PFAM: Protein of unknown function DUF2273; SPTR: Q0AZF8 Putative uncharacterized protein; PFAM: Small integral membrane protein (DUF2273).


ensembl_gene_id: Slip_0427
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Slip_0428
symbol: Slip_0428
gene_biotype: protein_coding
description:
  Peptidase M22 glycoprotease; COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR017860:IPR000905:IPR017861; KEGG: swo:Swol_0565 hypothetical protein; PFAM: peptidase M22 glycoprotease; SPTR: Q0AZF6 Putative uncharacterized protein; PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, putative, glycoprotease family.


ensembl_gene_id: Slip_0429
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Slip_0431
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: Slip_0432
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Slip_0433
symbol: Slip_0433
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: swo:Swol_0569 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Q0AZF2 Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Slip_0434
symbol: dxs
gene_biotype: protein_coding
description:
  Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Slip_0435
symbol: Slip_0435
gene_biotype: protein_coding
description:
  COGs: COG1189 rRNA methylase; InterPro IPR004538:IPR002942:IPR002877; KEGG: swo:Swol_0583 hypothetical protein; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein; SPTR: A1HQ59 Hemolysin A; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein.


ensembl_gene_id: Slip_0436
symbol: nadK
gene_biotype: protein_coding
description:
  ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Slip_0437
symbol: Slip_0437
gene_biotype: protein_coding
description:
  Putative rRNA methylase; InterPro IPR010719; KEGG: lpl:lp_1314 methyltransferase (putative); PFAM: putative rRNA methylase; SPTR: Q88XB1 Methyltransferase (Putative); PFAM: Putative rRNA methylase.


ensembl_gene_id: Slip_0440
symbol: Slip_0440
gene_biotype: protein_coding
description:
  Stage IV sporulation protein B; InterPro IPR014219:IPR001478:IPR009003:IPR008763; KEGG: swo:Swol_0589 hypothetical protein; PFAM: peptidase S55 SpoIVB; PRIAM: SpoIVB peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Q0AZD6 SpoIVB peptidase. Serine peptidase. MEROPS family S55; TIGRFAM: stage IV sporulation protein B; PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B.


ensembl_gene_id: Slip_0441
symbol: Slip_0441
gene_biotype: protein_coding
description:
  Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: Slip_0442
symbol: Slip_0442
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: Slip_0443
symbol: Slip_0443
gene_biotype: protein_coding
description:
  Thiamin pyrophosphokinase catalytic region; COGs: COG4825 Uncharacterized membrane-anchored protein; InterPro IPR007371; KEGG: swo:Swol_0591 hypothetical protein; PFAM: Thiamin pyrophosphokinase catalytic region; SPTR: Q0AZD4 Putative uncharacterized protein; PFAM: Thiamine pyrophosphokinase C terminal; Thiamin pyrophosphokinase, catalytic domain.


ensembl_gene_id: Slip_0444
symbol: Slip_0444
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0592 hypothetical protein; SPTR: Q0AZD3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3186).


ensembl_gene_id: Slip_0445
symbol: Slip_0445
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: swo:Swol_0593 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Q0AZD2 Glycosyltransferase, group 2 family; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Slip_0446
symbol: Slip_0446
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0594 hypothetical protein; SPTR: Q0AZD1 Putative uncharacterized protein; PFAM: Glycosyl transferase family 4.


ensembl_gene_id: Slip_0447
symbol: Slip_0447
gene_biotype: protein_coding
description:
  Peptidase T-like protein; COGs: COG2195 Di- and tripeptidase; InterPro IPR010162:IPR001261:IPR011650:IPR002933; KEGG: swo:Swol_0595 tripeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Q0AZD0 Tripeptidase; TIGRFAM: peptidase T-like protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein.


ensembl_gene_id: Slip_0450
symbol: Slip_0450
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR004385:IPR020084:IPR000086:IPR015797; KEGG: dau:Daud_1325 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: B1I4F8 NUDIX hydrolase; PFAM: NUDIX domain; TIGRFAM: nudix hydrolase, YffH family; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Slip_0452
symbol: Slip_0452
gene_biotype: protein_coding
description:
  COGs: COG1379 conserved hypothetical protein; InterPro IPR010994; KEGG: swo:Swol_0598 hypothetical protein; SPTR: Q0AZC7 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR00375.


ensembl_gene_id: Slip_0454
symbol: Slip_0454
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: swo:Swol_2127 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Q0AV36 Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Slip_0455
symbol: Slip_0455
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR013764:IPR009100:IPR 009075:IPR006092:IPR006090; KEGG: dsy:DSY4721 hypothetical protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q24N82 Putative uncharacterized protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.


ensembl_gene_id: Slip_0456
symbol: Slip_0456
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006089:IPR013786:IPR006091:IPR013764:IPR 009100:IPR009075:IPR006092:IPR006090; KEGG: swo:Swol_2126 acyl-CoA dehydrogenase, short-chain specific; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q0AV37 Acyl-CoA dehydrogenase, short-chain specific; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_0457
symbol: Slip_0457
gene_biotype: protein_coding
description:
  COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076:IPR003042; KEGG: swo:Swol_2124 hypothetical protein; PFAM: FAD dependent oxidoreductase; PRIAM: Electron-transferring-flavoprotein dehydrogenase; SPTR: Q0AV38 Putative uncharacterized protein; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: Slip_0458
symbol: Slip_0458
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG2440 Ferredoxin-like protein; InterPro IPR017900:IPR012206:IPR017896; KEGG: swo:Swol_2123 hypothetical protein; SPTR: Q0AV39 Putative uncharacterized protein.


ensembl_gene_id: Slip_0459
symbol: Slip_0459
gene_biotype: protein_coding
description:
  COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR000049:IPR014729:IPR012255:IPR014730; KEGG: swo:Swol_2122 hypothetical protein; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Q0AV40 Putative uncharacterized protein; PFAM: Electron transfer flavoprotein domain.


ensembl_gene_id: Slip_0460
symbol: Slip_0460
gene_biotype: protein_coding
description:
  COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014729:IPR001308:IPR014730:IPR014731; KEGG: swo:Swol_2121 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Q0AV41 Electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: Slip_0461
symbol: Slip_0461
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: pth:PTH_0794 enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: A5D469 Enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_0462
symbol: Slip_0462
gene_biotype: protein_coding
description:
  COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR010916:IPR003702; KEGG: swo:Swol_2128 hypothetical protein; PFAM: acetyl-CoA hydrolase/transferase; SPTR: Q0AV35 Putative uncharacterized protein; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.


ensembl_gene_id: Slip_0464
symbol: Slip_0464
gene_biotype: protein_coding
description:
  Propanoyl-CoA C-acyltransferase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016038:IPR016039:IPR002155; KEGG: dat:HRM2_39910 AtoB4; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: C0QC32 AtoB4; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_0465
symbol: Slip_0465
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: dol:Dole_2160 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A8ZUD2 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_0466
symbol: Slip_0466
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: rop:ROP_28110 putative oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1B5D2 Putative oxidoreductase; PFAM: short chain dehydrogenase.


ensembl_gene_id: Slip_0467
symbol: Slip_0467
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: mag:amb2141 C-subunit of benzoyl-CoA reductase; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; PRIAM: Benzoyl-CoA reductase; SPTR: Q565U6 Benzoyl-CoA reductase, gamma subunit; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, bzd-type, N subunit; benzoyl-CoA reductase, subunit C.


ensembl_gene_id: Slip_0468
symbol: Slip_0468
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: dat:HRM2_43030 HgdA; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; PRIAM: Benzoyl-CoA reductase; SPTR: C0QDT8 HgdA; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Slip_0469
symbol: Slip_0469
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: mta:Moth_1005 CoA enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; PRIAM: Benzoyl-CoA reductase; SPTR: C6Q188 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; benzoyl-CoA reductase, bcr type, subunit D.


ensembl_gene_id: Slip_0470
symbol: Slip_0470
gene_biotype: protein_coding
description:
  L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: dsy:DSY3794 hypothetical protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: Q24QV9 Putative uncharacterized protein; PFAM: CoA-transferase family III.


ensembl_gene_id: Slip_0471
symbol: Slip_0471
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: tex:Teth514_1169 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: C6PBL6 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Slip_0472
symbol: Slip_0472
gene_biotype: protein_coding
description:
  COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterPro IPR000834:IPR011151:IPR011146:IPR001937; KEGG: tme:Tmel_0076 galactose-1-phosphate uridylyltransferase; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: A6LJ52 Galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1.


ensembl_gene_id: Slip_0473
symbol: Slip_0473
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR016040:IPR004089; KEGG: swo:Swol_1840 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q0AVW6 Putative methyl-accepting chemotaxis sensory transducer; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_0474
symbol: Slip_0474
gene_biotype: protein_coding
description:
  Dynamin family protein; InterPro IPR001401; KEGG: tte:TTE1899 GTPase (dynamin-related); PFAM: Dynamin family protein; SPTR: Q8R8U2 Predicted GTPases (Dynamin-related); PFAM: Dynamin family.


ensembl_gene_id: Slip_0475
symbol: Slip_0475
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: nca:Noca_4137 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A1SP99 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Slip_0477
symbol: hppA
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: Slip_0478
symbol: Slip_0478
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: kol:Kole_0767 transposase IS3/IS911 family protein; SPTR: C5CG38 Transposase IS3/IS911 family protein; PFAM: Transposase.


ensembl_gene_id: Slip_0479
symbol: Slip_0479
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: dhd:Dhaf_3545 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q24UV1 Putative uncharacterized protein; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_0480
symbol: Slip_0480
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sdn:Sden_2629 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ.


ensembl_gene_id: Slip_0481
symbol: Slip_0481
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR013764:IPR009075:IPR 009100:IPR006090; KEGG: swo:Swol_0384 hypothetical protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q0AZY2 Putative uncharacterized protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.


ensembl_gene_id: Slip_0482
symbol: Slip_0482
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR013328:IPR008927:IPR006176:IPR 006108; KEGG: tte:TTE0548 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: C6P919 3-hydroxybutyryl-CoA dehydrogenase (Fragment); PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Slip_0483
symbol: Slip_0483
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dhd:Dhaf_4704 beta-lactamase domain protein; SPTR: B8FXU8 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_0484
symbol: Slip_0484
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: gyc:GYMC61_1972 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C9RZR6 3-oxoacyl-(Acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase.


ensembl_gene_id: Slip_0485
symbol: Slip_0485
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR020053:IPR001753; KEGG: tte:TTE0544 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Q8RC92 Enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_0486
symbol: Slip_0486
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: drm:Dred_1492 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: A4J4L9 Short chain enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_0487
symbol: Slip_0487
gene_biotype: protein_coding
description:
  Transferase hexapeptide repeat containing protein; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR011004:IPR001451; KEGG: sat:SYN_01169 acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; SPTR: Q2LWG6 Predicted acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: Slip_0488
symbol: Slip_0488
gene_biotype: protein_coding
description:
  KEGG: pth:PTH_1547 hypothetical protein; SPTR: A5D1Z6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2889).


ensembl_gene_id: Slip_0489
symbol: Slip_0489
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR002078:IPR009057:IPR002197:IPR 020441:IPR003593; KEGG: swo:Swol_0792 hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Q0AYU1 Putative uncharacterized protein; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Slip_0490
symbol: Slip_0490
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: pcr:Pcryo_0750 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Q1QCS0 Enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_0491
symbol: Slip_0491
gene_biotype: protein_coding
description:
  Stage II sporulation protein M; InterPro IPR014196:IPR018062:IPR002798; KEGG: swo:Swol_0605 uncharacterized membrane protein; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Q0AZC0 Uncharacterized membrane protein; TIGRFAM: stage II sporulation protein M; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.


ensembl_gene_id: Slip_0493
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Slip_0494
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: Slip_0495
symbol: Slip_0495
gene_biotype: protein_coding
description:
  COGs: COG0213 Thymidine phosphorylase; InterProIPR018090:IPR017872:IPR020072:IPR000312:IPR 013102:IPR017459:IPR000053; KEGG: swo:Swol_0609 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; PRIAM: Pyrimidine-nucleoside phosphorylase; SPTR: Q0AZB6 Thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimid [...]


ensembl_gene_id: Slip_0496
symbol: Slip_0496
gene_biotype: protein_coding
description:
  COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR013785:IPR000644:IPR002912; KEGG: swo:Swol_2551 signal transduction protein; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein; SPTR: Q0ATW6 Putative signal transduction protein with CBS domains; PFAM: CBS domain; ACT domain.


ensembl_gene_id: Slip_0497
symbol: Slip_0497
gene_biotype: protein_coding
description:
  Silent information regulator protein Sir2; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR010916:IPR003000; KEGG: swo:Swol_1033 Sir2 family regulatory protein; PFAM: Silent information regulator protein Sir2; SPTR: Q0AY57 Regulatory protein, sir2 family; PFAM: Sir2 family.


ensembl_gene_id: Slip_0498
symbol: Slip_0498
gene_biotype: protein_coding
description:
  Diguanylate cyclase and metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterProIPR000014:IPR000160:IPR013767:IPR003018:IPR 013656:IPR006674:IPR000700:IPR001610:IPR003607; KEGG: drm:Dred_1552 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; GAF domain protein; metal-dependent phosphohydrolase HD region; SPTR: A4J4S7 Diguan [...]


ensembl_gene_id: Slip_0499
symbol: Slip_0499
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: swo:Swol_0789 acetyl-CoA C-acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q0AYU4 Acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_0500
symbol: Slip_0500
gene_biotype: protein_coding
description:
  COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: swo:Swol_0309 acetyl-CoA hydrolase/transferase; PFAM: acetyl-CoA hydrolase/transferase; SPTR: Q0B052 Acetyl-CoA hydrolase/transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.


ensembl_gene_id: Slip_0501
symbol: Slip_0501
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006089:IPR013786:IPR006091:IPR013764:IPR 009100:IPR009075:IPR006092:IPR006090; KEGG: swo:Swol_0788 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q0AYU5 Butyryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_0503
symbol: Slip_0503
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR006180:IPR016040:IPR013328:IPR008927:IPR 006176:IPR006108; KEGG: drm:Dred_1890 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: A4J5Q9 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Slip_0504
symbol: Slip_0504
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR009057:IPR013767:IPR002197:IPR 020441:IPR000014:IPR003593; KEGG: swo:Swol_0456 hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: Q0AZR3 Putative uncharacterized protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Sucrose-6F-phosph [...]


ensembl_gene_id: Slip_0505
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Slip_0506
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Slip_0507
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Slip_0508
symbol: Slip_0508
gene_biotype: protein_coding
description:
  Homocitrate synthase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR013477:IPR002034:IPR013785:IPR000891; KEGG: swo:Swol_0375 trans-homoaconitate synthase; PFAM: pyruvate carboxyltransferase; SPTR: Q0AZZ0 Putative uncharacterized protein; TIGRFAM: homocitrate synthase; manually curated; PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: Slip_0509
symbol: leuC
gene_biotype: protein_coding
description:
  Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Slip_0510
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: Slip_0511
symbol: Slip_0511
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase, NADP-dependent; COGs: COG0538 Isocitrate dehydrogenase; InterPro IPR004439:IPR019818:IPR001804; KEGG: afl:Aflv_0505 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: B7GGT7 Isocitrate dehydrogenase [NADP]; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type.


ensembl_gene_id: Slip_0512
symbol: Slip_0512
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_1937 carbohydrate-binding family 25 protein; SPTR: Q2RH54 Carbohydrate binding family 25; PFAM: Carbohydrate binding domain (family 25).


ensembl_gene_id: Slip_0514
symbol: Slip_0514
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dae:Dtox_0787 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C8W232 Glycosyl transferase group 1; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.


ensembl_gene_id: Slip_0515
symbol: Slip_0515
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013785:IPR006158:IPR007197:IPR006638; KEGG: nth:Nther_0671 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B2A770 Radical SAM domain protein; PFAM: Radical SAM superfamily; B12 binding domain.


ensembl_gene_id: Slip_0516
symbol: Slip_0516
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: tdn:Suden_0836 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q30SB7 Diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Slip_0517
symbol: Slip_0517
gene_biotype: protein_coding
description:
  Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterProIPR016055:IPR011004:IPR005835:IPR001451:IPR 005844; KEGG: dau:Daud_1040 nucleotidyl transferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; SPTR: B1I3K9 Nucleotidyl transferase; PFAM: Nucleotidyl transferase; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha  [...]


ensembl_gene_id: Slip_0518
symbol: Slip_0518
gene_biotype: protein_coding
description:
  COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterProIPR001937:IPR002052:IPR011151:IPR011146:IPR 005850; KEGG: adg:Adeg_0450 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: C9RBH5 Galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, f [...]


ensembl_gene_id: Slip_0520
symbol: addB
gene_biotype: protein_coding
description:
  ATP-dependent nuclease subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: Slip_0522
symbol: sbcD
gene_biotype: protein_coding
description:
  Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: Slip_0523
symbol: Slip_0523
gene_biotype: protein_coding
description:
  SMC domain protein; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: hmo:HM1_1589 exonuclease sbcc, putative; PFAM: SMC domain protein; SPTR: B0TDB8 Exonuclease sbcc, putative; TIGRFAM: exonuclease SbcC.


ensembl_gene_id: Slip_0524
symbol: Slip_0524
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterProIPR012338:IPR015956:IPR001967:IPR012907:IPR 018044; KEGG: swo:Swol_0612 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: Q0AZB3 Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; Belongs to the peptidase S11 family.


ensembl_gene_id: Slip_0525
symbol: Slip_0525
gene_biotype: protein_coding
description:
  Anti-sigma-factor antagonist; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR003658:IPR014237:IPR002645; KEGG: swo:Swol_0613 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Q0AZB2 Anti-sigma factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Slip_0526
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Putative anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: Slip_0527
symbol: Slip_0527
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR014322:IPR014284:IPR000943:IPR011991:IPR 013325:IPR013324:IPR007627:IPR007624:IPR007630; KEGG: swo:Swol_0615 sigma 28 (flagella/sporulation); PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; SPTR: Q0AZB0 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 r [...]


ensembl_gene_id: Slip_0528
symbol: Slip_0528
gene_biotype: protein_coding
description:
  Stage V sporulation protein AC; InterPro IPR014203:IPR005562; KEGG: drm:Dred_1106 SpoVA protein; PFAM: SpoVA protein; SPTR: A4J3I8 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC.


ensembl_gene_id: Slip_0529
symbol: Slip_0529
gene_biotype: protein_coding
description:
  InterPro IPR010894; KEGG: swo:Swol_0627 stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; SPTR: Q0AZ98 Stage V sporulation AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD.


ensembl_gene_id: Slip_0530
symbol: Slip_0530
gene_biotype: protein_coding
description:
  Stage V sporulation protein AE; InterPro IPR014204:IPR005562; KEGG: swo:Swol_0628 SpoVA protein; PFAM: SpoVA protein; SPTR: Q0AZ97 SpoVA protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE.


ensembl_gene_id: Slip_0531
symbol: Slip_0531
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2229, CoA enzyme activase; COGs: COG3580 conserved hypothetical protein; InterPro IPR018709; KEGG: amt:Amet_1169 hypothetical protein; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; SPTR: A6TMG0 Putative uncharacterized protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229).


ensembl_gene_id: Slip_0532
symbol: Slip_0532
gene_biotype: protein_coding
description:
  COGs: COG3581 conserved hypothetical protein; KEGG: swo:Swol_0631 hypothetical protein; SPTR: Q0AZ95 Putative uncharacterized protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229).


ensembl_gene_id: Slip_0533
symbol: Slip_0533
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: swo:Swol_0632 CoA-substrate-specific enzyme activase domain-containing protein; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: Q0AZ94 CoA-substrate-specific enzyme activase domain protein; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: Slip_0534
symbol: trpB
gene_biotype: protein_coding
description:
  Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Slip_0535
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Slip_0536
symbol: Slip_0536
gene_biotype: protein_coding
description:
  CBS domain containing protein; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR001667:IPR003156:IPR000644:IPR002646; KEGG: swo:Swol_1420 polyA polymerase family protein; PFAM: CBS domain containing protein; phosphoesterase DHHA1; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; SMART: CBS domain containing protein; SPTR: Q0AX27 PolyA polymerase family protein; PFAM: DHHA1 domain; DHH family; CBS domain; Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Slip_0537
symbol: Slip_0537
gene_biotype: protein_coding
description:
  Peptidase M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: swo:Swol_1419 peptidase M50; PFAM: peptidase M50; SPTR: Q0AX28 Peptidase M50; PFAM: Peptidase family M50.


ensembl_gene_id: Slip_0538
symbol: Slip_0538
gene_biotype: protein_coding
description:
  COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR001412:IPR014729:IPR002305; KEGG: hmo:HM1_1883 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: B0TFC4 Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase.


ensembl_gene_id: Slip_0539
symbol: scpA
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Slip_0540
symbol: scpB
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Slip_0541
symbol: Slip_0541
gene_biotype: protein_coding
description:
  InterPro IPR018961; KEGG: swo:Swol_1416 hypothetical protein; PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; SPTR: Q0AX31 Expressed protein; PFAM: Domain of unknown function (DUF1992).


ensembl_gene_id: Slip_0542
symbol: Slip_0542
gene_biotype: protein_coding
description:
  KEGG: pth:PTH_1240 hypothetical protein; SPTR: A5D2V8 Hypothetical membrane protein; PFAM: Protein of unknown function (DUF2953).


ensembl_gene_id: Slip_0543
symbol: Slip_0543
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR013352:IPR017900:IPR003149:IPR009016:IPR 001041:IPR019574:IPR001450:IPR004108:IPR017896; KEGG: swo:Swol_2436 (Fe) hydrogenase, large subunit HymC, putative; PFAM: hydrogenase large subunit domain protein; ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; SPTR: Q0AU79 (Fe) hydrogenase, large subunit HymC, putative; TIGRFAM: hydrogenase, Fe-only; PFAM: Iron only hydrogenase la [...]


ensembl_gene_id: Slip_0544
symbol: Slip_0544
gene_biotype: protein_coding
description:
  Addiction module toxin, RelE/StbE family; InterPro IPR012753; KEGG: pth:PTH_0033 hypothetical protein; SPTR: A5D6C5 Putative uncharacterized protein; TIGRFAM: addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family.


ensembl_gene_id: Slip_0545
symbol: Slip_0545
gene_biotype: protein_coding
description:
  SpoVT/AbrB domain protein; InterPro IPR007159:IPR015940; KEGG: pth:PTH_0034 hypothetical protein; PFAM: SpoVT/AbrB domain protein; SPTR: A5D6C6 Putative uncharacterized protein; PFAM: SpoVT / AbrB like domain.


ensembl_gene_id: Slip_0546
symbol: Slip_0546
gene_biotype: protein_coding
description:
  Protein of unknown function DUF6 transmembrane; InterPro IPR000620; KEGG: adg:Adeg_0093 conserved hypothetical protein; inner membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C9RAJ2 Putative uncharacterized protein; PFAM: EamA-like transporter family.


ensembl_gene_id: Slip_0547
symbol: Slip_0547
gene_biotype: protein_coding
description:
  Monogalactosyldiacylglycerol synthase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR009695:IPR007235; KEGG: adg:Adeg_0646 monogalactosyldiacylglycerol synthase; PFAM: Monogalactosyldiacylglycerol synthase; Glycosyltransferase 28 domain; SPTR: C9RC16 Monogalactosyldiacylglycerol synthase; PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase.


ensembl_gene_id: Slip_0548
symbol: Slip_0548
gene_biotype: protein_coding
description:
  COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: adg:Adeg_0647 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: C9RC17 Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase.


ensembl_gene_id: Slip_0549
symbol: Slip_0549
gene_biotype: protein_coding
description:
  COGs: COG1963 conserved hypothetical protein; InterPro IPR003832; KEGG: adg:Adeg_0648 acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; SPTR: C9RC18 Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family.


ensembl_gene_id: Slip_0550
symbol: Slip_0550
gene_biotype: protein_coding
description:
  Haloacid dehalogenase domain protein hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR005833; KEGG: swo:Swol_2046 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q0AVB4 Putative uncharacterized protein; PFAM: haloacid dehalogenase-like hydrolase.


ensembl_gene_id: Slip_0551
symbol: Slip_0551
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: swo:Swol_2164 nitroreductase; PFAM: nitroreductase; SPTR: Q0AUZ9 Nitroreductase; PFAM: Nitroreductase family.


ensembl_gene_id: Slip_0552
symbol: Slip_0552
gene_biotype: protein_coding
description:
  Sporulation protein YtfJ; COGs: COG3874 conserved hypothetical protein; InterPro IPR014229; KEGG: swo:Swol_1414 hypothetical protein; PFAM: Sporulation protein YtfJ; SPTR: Q0AX33 Putative uncharacterized protein; TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ.


ensembl_gene_id: Slip_0553
symbol: Slip_0553
gene_biotype: protein_coding
description:
  Nucleoside recognition domain protein; COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis; InterPro IPR011642; KEGG: swo:Swol_1413 nucleoside recognition proteinn; PFAM: nucleoside recognition domain protein; SPTR: Q0AX34 Nucleoside recognition proteinn; PFAM: Nucleoside recognition.


ensembl_gene_id: Slip_0554
symbol: Slip_0554
gene_biotype: protein_coding
description:
  Nucleoside recognition domain protein; COGs: COG0700 membrane protein; InterPro IPR011642; KEGG: swo:Swol_1412 nucleoside recognition proteinn; PFAM: nucleoside recognition domain protein; SPTR: Q0AX35 Nucleoside recognition proteinn; PFAM: Nucleoside recognition.


ensembl_gene_id: Slip_0555
symbol: Slip_0555
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: xau:Xaut_4185 ABC transporter related; SPTR: Q07Q33 ABC transporter related.


ensembl_gene_id: Slip_0557
symbol: Slip_0557
gene_biotype: protein_coding
description:
  Phage SPO1 DNA polymerase-related protein; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273:IPR005122; KEGG: swo:Swol_1870 uracil-DNA glycosylase-like protein; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Q0AVT6 Uracil-DNA glycosylase-like protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4.


ensembl_gene_id: Slip_0558
symbol: Slip_0558
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0079; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: swo:Swol_1869 hypothetical protein; PFAM: protein of unknown function UPF0079; SPTR: Q0AVT7 Putative uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein.


ensembl_gene_id: Slip_0559
symbol: Slip_0559
gene_biotype: protein_coding
description:
  Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: swo:Swol_1868 metal-dependent protease-like protein; PFAM: peptidase M22 glycoprotease; SPTR: Q0AVT8 Metal-dependent protease-like protein; PFAM: Glycoprotease family.


ensembl_gene_id: Slip_0560
symbol: Slip_0560
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: Slip_0561
symbol: tsaD
gene_biotype: protein_coding
description:
  Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Slip_0562
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Slip_0563
symbol: Slip_0563
gene_biotype: protein_coding
description:
  COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: swo:Swol_1864 5-formyltetrahydrofolate cyclo-ligase family protein; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: Q0AVU2 5-formyltetrahydrofolate cyclo-ligase family protein; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase.


ensembl_gene_id: Slip_0564
symbol: Slip_0564
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: amt:Amet_1695 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: A6TNV3 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.


ensembl_gene_id: Slip_0566
symbol: Slip_0566
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Slip_0568
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: Slip_0569
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: Slip_0570
symbol: Slip_0570
gene_biotype: protein_coding
description:
  MOSC domain containing protein; COGs: COG2258 conserved hypothetical protein; InterPro IPR015808:IPR011037:IPR005302; KEGG: pth:PTH_2622 hypothetical protein; PFAM: MOSC domain containing protein; SPTR: A5CYY9 Putative uncharacterized protein; PFAM: MOSC domain.


ensembl_gene_id: Slip_0571
symbol: Slip_0571
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain protein; COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR001453; KEGG: chy:CHY_0805 molybdenum cofactor synthesis domain-containing protein; PFAM: molybdopterin binding domain; SPTR: Q3ADX5 Molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain.


ensembl_gene_id: Slip_0572
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Slip_0573
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Slip_0575
symbol: Slip_0575
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR002078:IPR009057:IPR013767:IPR 002197:IPR020441:IPR003593; KEGG: pth:PTH_2438 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: A5CZF6 Transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction [...]


ensembl_gene_id: Slip_0576
symbol: Slip_0576
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: swo:Swol_0438 hypothetical protein; SPTR: Q0AZS8 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_0577
symbol: Slip_0577
gene_biotype: protein_coding
description:
  Thiolase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155; KEGG: dhd:Dhaf_3645 thiolase; SPTR: Q24UL8 Putative uncharacterized protein; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_0578
symbol: Slip_0578
gene_biotype: protein_coding
description:
  L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR005479:IPR003673; KEGG: dhd:Dhaf_3654 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C6MRC7 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.


ensembl_gene_id: Slip_0579
symbol: Slip_0579
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR013328:IPR008927:IPR006176:IPR 006108; KEGG: dhd:Dhaf_3651 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: Q24UL2 Putative uncharacterized protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Slip_0580
symbol: Slip_0580
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: gyc:GYMC61_2280 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: C9S1P8 Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Slip_0581
symbol: Slip_0581
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006089:IPR013786:IPR006091:IPR013764:IPR 009100:IPR009075:IPR006092:IPR006090; KEGG: dhd:Dhaf_3652 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q24UL1 Putative uncharacterized protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_0582
symbol: Slip_0582
gene_biotype: protein_coding
description:
  KEGG: amt:Amet_3705 hypothetical protein; SPTR: A6TUF7 Putative uncharacterized protein; PFAM: GPR1/FUN34/yaaH family.


ensembl_gene_id: Slip_0583
symbol: Slip_0583
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: npu:Npun_R2067 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B2J527 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Slip_0584
symbol: Slip_0584
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR016196:IPR011701; KEGG: pth:PTH_2422 arabinose efflux permease; PFAM: major facilitator superfamily MFS_1; SPTR: A5CZG9 Arabinose efflux permease; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Slip_0585
symbol: Slip_0585
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR002078:IPR009057:IPR013767:IPR 002197:IPR020441:IPR003593; KEGG: pth:PTH_2438 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: A5CZF6 Transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS [...]


ensembl_gene_id: Slip_0586
symbol: Slip_0586
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013785:IPR007197:IPR006638; KEGG: swo:Swol_0919 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AYG9 Oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_0587
symbol: Slip_0587
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: swo:Swol_1451 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q0AWZ6 Putative methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_0589
symbol: Slip_0589
gene_biotype: protein_coding
description:
  COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR005904:IPR000836; KEGG: dae:Dtox_0723 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: C8W1J2 Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Slip_0591
symbol: Slip_0591
gene_biotype: protein_coding
description:
  Helicase c2; COGs: COG1199 Rad3-related DNA helicase; InterPro IPR014013:IPR014001:IPR006555; KEGG: gau:GAU_1256 putative ATP-dependent DNA helicase; SMART: helicase c2; DEAD-like helicase; SPTR: C1F796 Putative DnaQ family exonuclease/DinG family helicase; PFAM: DEAD/DEAH box helicase.


ensembl_gene_id: Slip_0592
symbol: Slip_0592
gene_biotype: protein_coding
description:
  Copper amine oxidase domain protein; InterPro IPR012854; KEGG: bbe:BBR47_07470 hypothetical protein; PFAM: copper amine oxidase domain protein; SPTR: C0Z4J7 Putative uncharacterized protein; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_0594
symbol: sigI
gene_biotype: protein_coding
description:
  Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: Slip_0595
symbol: Slip_0595
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mka:MK0690 SMC1-family ATPase; SPTR: Q8TXI4 DNA double-strand break repair rad50 ATPase.


ensembl_gene_id: Slip_0596
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: Slip_0597
symbol: Slip_0597
gene_biotype: protein_coding
description:
  COGs: COG0015 Adenylosuccinate lyase; InterProIPR004769:IPR020557:IPR008948:IPR000362:IPR 019468:IPR003031; KEGG: swo:Swol_1779 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: Q0AW27 Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Slip_0598
symbol: purC
gene_biotype: protein_coding
description:
  COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR001636:IPR018236:IPR013816; KEGG: hmo:HM1_3111 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: C0GHA5 Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: Slip_0599
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assi [...]


ensembl_gene_id: Slip_0600
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: Slip_0601
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: Slip_0602
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: Slip_0603
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733:IPR010918:IPR016188:IPR000728; KEGG: swo:Swol_1777 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Q0AW29 Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; manually curated; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-termin [...]


ensembl_gene_id: Slip_0604
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: Slip_0605
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR002695:IPR013982:IPR011607; KEGG: swo:Swol_1775 phosphoribosylaminoimidazolecarboxamide formyltransferase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: Q0AW31 Bifunctional purine biosynthesis protein purH; TIGRFAM: phosphoribosylaminoimidazolecarbox [...]


ensembl_gene_id: Slip_0606
symbol: purD
gene_biotype: protein_coding
description:
  COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR000115:IPR020559:IPR013817:IPR013815:IPR 013816:IPR020560:IPR016185:IPR011054:IPR020562:IPR020561:I PR011761; KEGG: pth:PTH_2540 phosphoribosylamine-glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: A5CZ46 Phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribos [...]


ensembl_gene_id: Slip_0607
symbol: Slip_0607
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR019734:IPR013026; KEGG: swo:Swol_1773 hypothetical protein; SPTR: Q0AW33 Putative uncharacterized protein.


ensembl_gene_id: Slip_0608
symbol: Slip_0608
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; InterPro IPR006674:IPR003607; KEGG: swo:Swol_1772 HDIG domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AW34 HDIG domain protein, ambiguity; PFAM: HD domain.


ensembl_gene_id: Slip_0609
symbol: Slip_0609
gene_biotype: protein_coding
description:
  TrpR like protein, YerC/YecD; COGs: COG4496 conserved hypothetical protein; InterPro IPR013368:IPR013318:IPR010921:IPR000831; KEGG: swo:Swol_1771 hypothetical protein; PFAM: Trp repressor; SPTR: Q0AW35 Putative uncharacterized protein; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD.


ensembl_gene_id: Slip_0610
symbol: hisZ
gene_biotype: protein_coding
description:
  histidyl-tRNA synthetase 2; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: Slip_0611
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: Slip_0612
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Slip_0613
symbol: hisB
gene_biotype: protein_coding
description:
  COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR020565:IPR020568:IPR000807; KEGG: swo:Swol_1767 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Q0AW39 Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase.


ensembl_gene_id: Slip_0614
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Slip_0615
symbol: hisA
gene_biotype: protein_coding
description:
  COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006063:IPR013785:IPR011060:IPR006062; KEGG: swo:Swol_1766 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imid azole-4-carboxamideisomerase; PFAM: histidine biosynthesis protein; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Q0AW40 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide r [...]


ensembl_gene_id: Slip_0616
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Slip_0617
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP diphosphatase; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR008179:IPR002496; KEGG: swo:Swol_1764 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; SPTR: Q0AW42 Phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; [...]


ensembl_gene_id: Slip_0618
symbol: Slip_0618
gene_biotype: protein_coding
description:
  UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212:IPR014016:IPR014017; KEGG: swo:Swol_0368 superfamily I DNA/RNA helicase; PFAM: UvrD/REP helicase; SPTR: Q0AZZ6 ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase.


ensembl_gene_id: Slip_0619
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: Slip_0620
symbol: Slip_0620
gene_biotype: protein_coding
description:
  COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: dae:Dtox_3817 delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; SPTR: C8VXC5 Delta-lactam-biosynthetic de-N-acetylase; PFAM: Polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase.


ensembl_gene_id: Slip_0622
symbol: Slip_0622
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; COGs: COG0714 MoxR-like ATPase; InterPro IPR003959:IPR003593; KEGG: pth:PTH_1544 MoxR-like ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A5D1Z3 MoxR-like ATPase; PFAM: ATPase family associated with various cellular activities (AAA).


ensembl_gene_id: Slip_0623
symbol: Slip_0623
gene_biotype: protein_coding
description:
  COGs: COG3825 conserved hypothetical protein; KEGG: swo:Swol_2133 hypothetical protein; SPTR: Q0AV30 Putative uncharacterized protein; PFAM: VWA domain containing CoxE-like protein.


ensembl_gene_id: Slip_0624
symbol: Slip_0624
gene_biotype: protein_coding
description:
  Lysine exporter protein (LYSE/YGGA); InterPro IPR001123; KEGG: pth:PTH_0466 putative threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A5D544 Putative threonine efflux protein; PFAM: LysE type translocator.


ensembl_gene_id: Slip_0625
symbol: Slip_0625
gene_biotype: protein_coding
description:
  COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR018236:IPR013816:IPR001636; KEGG: swo:Swol_1209 phosphoribosylaminoimidazolesuccinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Q0AXN6 Phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: Slip_0626
symbol: Slip_0626
gene_biotype: protein_coding
description:
  LAO/AO transport system ATPase; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR003593:IPR005129; KEGG: dae:Dtox_1911 LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; SPTR: C8VXU6 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase.


ensembl_gene_id: Slip_0628
symbol: Slip_0628
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1242 Fe-S oxidoreductase; InterPro IPR006638:IPR013785:IPR007197:IPR005911; KEGG: drm:Dred_1358 putative radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A4J489 Conserved hypothetical radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family.


ensembl_gene_id: Slip_0629
symbol: Slip_0629
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1808 membrane protein; InterPro IPR005240; KEGG: drm:Dred_3064 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A4J913 Putative uncharacterized protein; manually curated; PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain.


ensembl_gene_id: Slip_0631
symbol: Slip_0631
gene_biotype: protein_coding
description:
  Sucrose-phosphate phosphatase subfamily; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR006380:IPR006379:IPR006378; KEGG: pth:PTH_0618 hydrolase; PFAM: sucrose-6F-phosphate phosphohydrolase; SPTR: A5D4Q2 Predicted hydrolase; TIGRFAM: Sucrose-phosphate phosphatase subfamily; HAD-superfamily hydrolase, subfamily IIB; PFAM: Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; Sucrose-phosphate phosphatase subfamily; HAD-superfamily hydrolase, subfamily IIB.


ensembl_gene_id: Slip_0632
symbol: Slip_0632
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pth:PTH_0617 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A5D4Q1 Glycosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Slip_0633
symbol: Slip_0633
gene_biotype: protein_coding
description:
  COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); InterPro IPR007210; KEGG: mta:Moth_1685 substrate-binding region of ABC-type glycine betaine transport system; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SPTR: Q2RHV2 Substrate-binding region of ABC-type glycine betaine transport system; PFAM: Substrate binding domain of ABC-type glycine betaine transport system.


ensembl_gene_id: Slip_0634
symbol: Slip_0634
gene_biotype: protein_coding
description:
  COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: mta:Moth_1686 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q2RHV1 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Slip_0635
symbol: Slip_0635
gene_biotype: protein_coding
description:
  COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: mta:Moth_1687 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q2RHV0 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Slip_0636
symbol: Slip_0636
gene_biotype: protein_coding
description:
  COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterProIPR003593:IPR000644:IPR017871:IPR013785:IPR 003439:IPR005892; KEGG: mta:Moth_1688 glycine betaine/L-proline transport ATP binding subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; CBS domain containing protein; SPTR: Q2RHU9 Glycine betaine/L-proline transport ATP binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit.


ensembl_gene_id: Slip_0638
symbol: Slip_0638
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: swo:Swol_1738 ABC transporter substrate-binding protein; SPTR: Q0AW68 ABC transporter substrate-binding protein.


ensembl_gene_id: Slip_0639
symbol: Slip_0639
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR016040:IPR011991:IPR006037; KEGG: dhd:Dhaf_1338 transcriptional regulator, GntR family; PFAM: TrkA-C domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Q24Q77 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, gntR family; TrkA-C domain.


ensembl_gene_id: Slip_0640
symbol: Slip_0640
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: tsi:TSIB_1862 hypothetical protein; PFAM: protein of unknown function UPF0066; SPTR: C8SBB5 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: conserved hypothetical protein TIGR00104.


ensembl_gene_id: Slip_0641
symbol: Slip_0641
gene_biotype: protein_coding
description:
  Capsule synthesis protein, CapA; COGs: COG2843 Putative protein of poly-gamma-glutamate biosynthesis (capsule formation); InterPro IPR019079; KEGG: sth:STH526 hypothetical protein; PFAM: Capsule synthesis protein, CapA; SPTR: Q67S32 Putative uncharacterized protein; PFAM: Bacterial capsule synthesis protein PGA_cap.


ensembl_gene_id: Slip_0643
symbol: Slip_0643
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: swo:Swol_0708 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Q0AZ22 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: Slip_0644
symbol: Slip_0644
gene_biotype: protein_coding
description:
  InterPro IPR010106; KEGG: dae:Dtox_3455 hypothetical protein; SPTR: C8W6R9 Putative uncharacterized protein; manually curated; TIGRFAM: conserved hypothetical protein (putative transposase or invertase).


ensembl_gene_id: Slip_0646
symbol: Slip_0646
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1957; COGs: COG1543 conserved hypothetical protein; InterPro IPR011330:IPR004300:IPR015293; KEGG: pth:PTH_2228 hypothetical protein; PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; SPTR: A5D025 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57.


ensembl_gene_id: Slip_0647
symbol: Slip_0647
gene_biotype: protein_coding
description:
  COGs: COG3330 conserved hypothetical protein; KEGG: adg:Adeg_0430 hypothetical protein; SPTR: C9RBF6 Putative uncharacterized protein.


ensembl_gene_id: Slip_0648
symbol: Slip_0648
gene_biotype: protein_coding
description:
  Glycoside hydrolase 15-related protein; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR008928:IPR012341:IPR011613; KEGG: bbe:BBR47_37840 hypothetical protein; PFAM: glycoside hydrolase 15-related; SPTR: C0GDS6 Glycoside hydrolase 15-related protein.


ensembl_gene_id: Slip_0649
symbol: Slip_0649
gene_biotype: protein_coding
description:
  Abortive infection protein; InterPro IPR003675; KEGG: swo:Swol_2118 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: Q0AV44 CAAX amino terminal protease family protein; PFAM: CAAX amino terminal protease family.


ensembl_gene_id: Slip_0650
symbol: Slip_0650
gene_biotype: protein_coding
description:
  Regulatory protein, FmdB family; COGs: COG2331 conserved hypothetical protein; InterPro IPR013429; KEGG: swo:Swol_2117 hypothetical protein; PFAM: Putative regulatory protein FmdB; SPTR: Q0AV45 Putative uncharacterized protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.


ensembl_gene_id: Slip_0651
symbol: Slip_0651
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR006439:IPR006402; KEGG: rci:RCIX924 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q0W5S3 Putative hydrolase (HAD superfamily); TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, vari [...]


ensembl_gene_id: Slip_0652
symbol: Slip_0652
gene_biotype: protein_coding
description:
  InterPro IPR019657; KEGG: hmo:HM1_0267 hypothetical protein; PFAM: Late competence development protein ComFB; SPTR: A1HQ15 Putative uncharacterized protein; PFAM: Late competence development protein ComFB.


ensembl_gene_id: Slip_0654
symbol: Slip_0654
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_2114 hypothetical protein; SPTR: Q0AV48 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).


ensembl_gene_id: Slip_0655
symbol: Slip_0655
gene_biotype: protein_coding
description:
  NADH/Ubiquinone/plastoquinone (complex I); COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916:IPR001516:IPR001750; KEGG: det:DET0860 hydrogenase, EchA subunit, putative; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Q3Z863 Hydrogenase, EchA subunit, putative; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus.


ensembl_gene_id: Slip_0656
symbol: Slip_0656
gene_biotype: protein_coding
description:
  Respiratory-chain NADH dehydrogenase subunit 1; COGs: COG0650 Formate hydrogenlyase subunit 4; InterPro IPR001694; KEGG: dau:Daud_1099 respiratory-chain NADH dehydrogenase, subunit 1; PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: B1I3Q1 Respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH dehydrogenase.


ensembl_gene_id: Slip_0657
symbol: Slip_0657
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137; KEGG: dma:DMR_02750 Ech hydrogenase subunit EchC; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: C6MRU1 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit.


ensembl_gene_id: Slip_0658
symbol: Slip_0658
gene_biotype: protein_coding
description:
  NADH dehydrogenase (ubiquinone) 30 kDa subunit; InterPro IPR005829:IPR001268; KEGG: adg:Adeg_0552 hypothetical protein; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: C9RBS3 Putative uncharacterized protein; manually curated; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit.


ensembl_gene_id: Slip_0659
symbol: Slip_0659
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR018194:IPR001135; KEGG: ate:Athe_1086 NADH-ubiquinone oxidoreductase chain 49kDa; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: B9MR83 NADH-ubiquinone oxidoreductase chain 49kDa; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase.


ensembl_gene_id: Slip_0660
symbol: Slip_0660
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017900:IPR001450:IPR017896; KEGG: tte:TTE0128 formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I); PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Slip_0661
symbol: Slip_0661
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR003593:IPR009057:IPR002078:IPR020441:IPR 013767:IPR002197:IPR000014; KEGG: pth:PTH_0850 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: A5D3Y8 Transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS [...]


ensembl_gene_id: Slip_0662
symbol: Slip_0662
gene_biotype: protein_coding
description:
  Vinylacetyl-CoA Delta-isomerase; COGs: COG2368 Aromatic ring hydroxylase; InterPro IPR004925:IPR006091:IPR013764; KEGG: pgn:PGN_0727 4-hydroxybutyryl-CoA dehydratase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; PRIAM: Vinylacetyl-CoA Delta-isomerase; SPTR: A1HPH9 Vinylacetyl-CoA delta-isomerase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase N terminal; 4-hydroxyphenylacetate 3-hydroxylase C terminal.


ensembl_gene_id: Slip_0663
symbol: Slip_0663
gene_biotype: protein_coding
description:
  COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: ckr:CKR_2667 hypothetical protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: B9E5E3 Putative uncharacterized protein; PFAM: NifU-like domain.


ensembl_gene_id: Slip_0665
symbol: Slip_0665
gene_biotype: protein_coding
description:
  COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: cbe:Cbei_2103 acetyl-CoA hydrolase/transferase; PFAM: acetyl-CoA hydrolase/transferase; SPTR: A6LV90 Acetyl-CoA hydrolase/transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.


ensembl_gene_id: Slip_0666
symbol: Slip_0666
gene_biotype: protein_coding
description:
  KEGG: vei:Veis_4948 glutathione-regulated potassium-efflux system protein; SPTR: A1WSM8 Glutathione-regulated potassium-efflux system protein; PFAM: Protein of unknown function (DUF1097).


ensembl_gene_id: Slip_0667
symbol: Slip_0667
gene_biotype: protein_coding
description:
  Beta-lactamase domain-containing protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: acr:Acry_1421 beta-lactamase domain-containing protein; SPTR: A5FYE9 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_0668
symbol: Slip_0668
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709:IPR001828; KEGG: swo:Swol_2113 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; PFAM: Extracellular ligand-binding receptor; SPTR: Q0AV49 Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Slip_0669
symbol: Slip_0669
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: swo:Swol_2112 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Q0AV50 Branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Slip_0670
symbol: Slip_0670
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: swo:Swol_2111 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Q0AV51 Branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Slip_0671
symbol: Slip_0671
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: swo:Swol_2110 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q0AV52 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.


ensembl_gene_id: Slip_0672
symbol: Slip_0672
gene_biotype: protein_coding
description:
  InterPro IPR000620; KEGG: swo:Swol_2109 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Q0AV53 Putative uncharacterized protein; PFAM: EamA-like transporter family.


ensembl_gene_id: Slip_0673
symbol: Slip_0673
gene_biotype: protein_coding
description:
  SpoIID/LytB domain protein; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013693:IPR013486; KEGG: swo:Swol_2108 sporulation protein and related proteins; PFAM: Stage II sporulation D domain protein; SPTR: Q0AV54 Sporulation protein and related proteins; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain.


ensembl_gene_id: Slip_0674
symbol: Slip_0674
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: Slip_0675
symbol: Slip_0675
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: Slip_0676
symbol: Slip_0676
gene_biotype: protein_coding
description:
  COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: hor:Hore_21480 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; SPTR: B8D0F7 Phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases.


ensembl_gene_id: Slip_0678
symbol: Slip_0678
gene_biotype: protein_coding
description:
  COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: swo:Swol_1760 Zn-dependent hydrolase including glyoxylases; SPTR: Q0AW46 Zn-dependent hydrolase including glyoxylases; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_0679
symbol: Slip_0679
gene_biotype: protein_coding
description:
  COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: swo:Swol_1480 Zn-dependent hydrolases including glyoxylases-like protein; SPTR: Q0AWW9 Zn-dependent hydrolases including glyoxylases-like protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_0680
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Slip_0681
symbol: Slip_0681
gene_biotype: protein_coding
description:
  FolC bifunctional protein; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR004101:IPR018109:IPR001645; KEGG: swo:Swol_1648 hypothetical protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: Q0AWF7 Putative uncharacterized protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase.


ensembl_gene_id: Slip_0682
symbol: Slip_0682
gene_biotype: protein_coding
description:
  COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR000178:IPR018445; KEGG: swo:Swol_1647 hypothetical protein; PFAM: Putitive phosphate transport regulator; SPTR: Q0AWF8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF47.


ensembl_gene_id: Slip_0683
symbol: Slip_0683
gene_biotype: protein_coding
description:
  COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: swo:Swol_1646 phosphate transporter; PFAM: phosphate transporter; SPTR: Q0AWF9 Phosphate transporter; PFAM: Phosphate transporter family.


ensembl_gene_id: Slip_0684
symbol: rex
gene_biotype: protein_coding
description:
  CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: Slip_0686
symbol: Slip_0686
gene_biotype: protein_coding
description:
  Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Slip_0687
symbol: Slip_0687
gene_biotype: protein_coding
description:
  COGs: COG2003 DNA repair protein; InterPro IPR010994:IPR001405; KEGG: swo:Swol_1642 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: Q0AWG3 UPF0758 protein Swol_1642; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; Belongs to the UPF0758 family.


ensembl_gene_id: Slip_0688
symbol: Slip_0688
gene_biotype: protein_coding
description:
  Cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: swo:Swol_1641 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: Q0AWG4 Rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.


ensembl_gene_id: Slip_0692
symbol: Slip_0692
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; InterPro IPR017225:IPR007227; KEGG: swo:Swol_1639 hypothetical protein; SPTR: Q0AWG6 Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD; PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.


ensembl_gene_id: Slip_0693
symbol: Slip_0693
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterProIPR012338:IPR005311:IPR014798:IPR002345:IPR 001460:IPR017790; KEGG: swo:Swol_1638 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Q0AWG7 Peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.


ensembl_gene_id: Slip_0694
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: Slip_0695
symbol: Slip_0695
gene_biotype: protein_coding
description:
  Septum site-determining protein MinD; COGs: COG2894 Septum formation inhibitor-activating ATPase; InterPro IPR002586:IPR010223; KEGG: swo:Swol_1636 septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: Q0AWG9 Septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD.


ensembl_gene_id: Slip_0696
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: Slip_0697
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: Slip_0698
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: Slip_0700
symbol: Slip_0700
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR011055:IPR016047; KEGG: swo:Swol_1618 metalloendopeptidase-like membrane protein; PFAM: Peptidase M23; SPTR: Q0AWI5 Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.


ensembl_gene_id: Slip_0701
symbol: Slip_0701
gene_biotype: protein_coding
description:
  Peptidase M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: swo:Swol_1617 putative protease; PFAM: peptidase M50; SPTR: Q0AWI6 Putative protease; PFAM: Peptidase family M50.


ensembl_gene_id: Slip_0702
symbol: Slip_0702
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: swo:Swol_1616 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AWI7 Putative uncharacterized protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_0703
symbol: Slip_0703
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2344; COGs: COG5011 conserved hypothetical protein; InterPro IPR018768; KEGG: swo:Swol_1615 hypothetical protein; PFAM: Protein of unknown function DUF2344; SPTR: Q0AWI8 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2344).


ensembl_gene_id: Slip_0704
symbol: Slip_0704
gene_biotype: protein_coding
description:
  Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR016027:IPR012340:IPR019307:IPR004659; KEGG: swo:Swol_1614 ribonuclease E and G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Q0AWI9 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; TIGRFAM: ribonuclease, Rne/Rng family.


ensembl_gene_id: Slip_0705
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Slip_0706
symbol: Slip_0706
gene_biotype: protein_coding
description:
  Protein of unknown function DUF464; COGs: COG2868 ribosomal protein; InterPro IPR007422; KEGG: swo:Swol_1612 hypothetical protein; PFAM: protein of unknown function DUF464; SPTR: Q0AWJ1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF464).


ensembl_gene_id: Slip_0707
symbol: rpmA
gene_biotype: protein_coding
description:
  COGs: COG0211 Ribosomal protein L27; InterPro IPR001684:IPR018261; KEGG: swo:Swol_1611 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: Q0AWJ2 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: Slip_0708
symbol: Slip_0708
gene_biotype: protein_coding
description:
  InterPro IPR016120:IPR016121; KEGG: adg:Adeg_0184 signal transduction histidine kinase regulating citrate/malate metabolism; SPTR: C9RAS9 Signal transduction histidine kinase regulating citrate/malate metabolism.


ensembl_gene_id: Slip_0709
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Slip_0710
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: Slip_0711
symbol: Slip_0711
gene_biotype: protein_coding
description:
  COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203:IPR013984; KEGG: csc:Csac_0969 aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: A4XI48 Aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3.


ensembl_gene_id: Slip_0712
symbol: Slip_0712
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017900:IPR001450:IPR017896; KEGG: dau:Daud_0134 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B1I101 4Fe-4S ferredoxin, iron-sulfur binding domain protein.


ensembl_gene_id: Slip_0713
symbol: Slip_0713
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0153; InterPro IPR005358; KEGG: ctc:CTC02003 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Q892T6 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153); SEC-C motif.


ensembl_gene_id: Slip_0714
symbol: Slip_0714
gene_biotype: protein_coding
description:
  COGs: COG1184 Translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR000649; KEGG: dka:DKAM_0459 translation initiation factor IF-2B subunit delta; PFAM: initiation factor 2B related; SPTR: B8D3V4 Putative ribulose-1,5-bisphosphate isomerase; PFAM: Initiation factor 2 subunit family; Belongs to the eIF-2B alpha/beta/delta subunits family.


ensembl_gene_id: Slip_0715
symbol: Slip_0715
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR015797:IPR000086; KEGG: det:DET1290 NUDIX domain-containing protein; PFAM: NUDIX hydrolase; SPTR: Q3Z6Z7 NUDIX domain protein; PFAM: NUDIX domain.


ensembl_gene_id: Slip_0716
symbol: Slip_0716
gene_biotype: protein_coding
description:
  Protein of unknown function DUF815; COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR008533; KEGG: cpy:Cphy_1275 hypothetical protein; PFAM: protein of unknown function DUF815; SPTR: C6PXX0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF815).


ensembl_gene_id: Slip_0717
symbol: Slip_0717
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269:IPR005268; KEGG: dau:Daud_1584 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: B1I515 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1.


ensembl_gene_id: Slip_0718
symbol: Slip_0718
gene_biotype: protein_coding
description:
  COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR012336:IPR012335:IPR013766:IPR017936; KEGG: mta:Moth_0927 thioredoxin; PFAM: Thioredoxin domain; SPTR: Q2RJZ5 Thioredoxin; PFAM: Thioredoxin; Belongs to the thioredoxin family.


ensembl_gene_id: Slip_0720
symbol: Slip_0720
gene_biotype: protein_coding
description:
  COGs: COG0194 Guanylate kinase; InterPro IPR008145:IPR008144; KEGG: mgm:Mmc1_0641 guanylate kinase/L-type calcium channel region; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: A0L5B9 Guanylate kinase/L-type calcium channel region; PFAM: Guanylate kinase.


ensembl_gene_id: Slip_0721
symbol: Slip_0721
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR001264:IPR001460:IPR011816; KEGG: swo:Swol_1109 peptidoglycan glycosyltransferase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: Q0AXY5 Peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; penicillin-binding protei [...]


ensembl_gene_id: Slip_0722
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Slip_0723
symbol: Slip_0723
gene_biotype: protein_coding
description:
  Sporulation protein YunB; InterPro IPR019061:IPR014197; KEGG: swo:Swol_0931 hypothetical protein; PFAM: Sporulation protein YunB-like; SPTR: Q0AYF7 Putative uncharacterized protein; TIGRFAM: sporulation protein YunB; manually curated; PFAM: Sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB.


ensembl_gene_id: Slip_0724
symbol: Slip_0724
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; COGs: COG2206 HD-GYP domain; InterProIPR000014:IPR003018:IPR003607:IPR013767:IPR 006674:IPR006675; KEGG: sat:SYN_01234 response regulator receiver domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; PAS fold domain protein; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; PAS domain containing protein; SPTR: Q2YZR2 Putative uncharacterized protein; TIGRFAM: PAS sensor protein; metal dependent phophohydrolase; PFAM: HD domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; uncharact [...]


ensembl_gene_id: Slip_0725
symbol: Slip_0725
gene_biotype: protein_coding
description:
  Flagellar protein FlgJ; InterPro IPR019301; KEGG: hmo:HM1_0498 hypothetical protein; PFAM: Flagellar protein FlgJ-like; SPTR: B0TFL3 Putative uncharacterized protein; PFAM: Rod binding protein.


ensembl_gene_id: Slip_0726
symbol: Slip_0726
gene_biotype: protein_coding
description:
  COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444:IPR010930:IPR020013:IPR012834; KEGG: swo:Swol_0947 flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Q0AYE2 Flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria.


ensembl_gene_id: Slip_0727
symbol: Slip_0727
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: pth:PTH_1517 membrane-fusion protein; PFAM: secretion protein HlyD family protein; SPTR: A5D233 Membrane-fusion protein; PFAM: HlyD family secretion protein.


ensembl_gene_id: Slip_0728
symbol: Slip_0728
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: pth:PTH_1516 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A5D232 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Slip_0729
symbol: Slip_0729
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: pth:PTH_1515 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A5D231 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Slip_0730
symbol: Slip_0730
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR017985:IPR013525:IPR000412; KEGG: swo:Swol_2449 ABC-type multidrug transport system permease component; PFAM: ABC-2 type transporter; SPTR: Q0AU66 ABC-type multidrug transport system permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.


ensembl_gene_id: Slip_0731
symbol: Slip_0731
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR009057:IPR011075:IPR012287:IPR001647; KEGG: swo:Swol_2450 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q0AU65 Putative transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Slip_0732
symbol: Slip_0732
gene_biotype: protein_coding
description:
  COGs: COG3408 Glycogen debranching protein; InterPro IPR008928:IPR010401:IPR006451; KEGG: cth:Cthe_0115 glycogen debranching enzyme, putative; PFAM: Amylo-alpha-16-glucosidase; SPTR: A3DBM7 Glycogen debranching enzyme, putative; TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative.


ensembl_gene_id: Slip_0733
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Slip_0734
symbol: Slip_0734
gene_biotype: protein_coding
description:
  Homocysteine S-methyltransferase; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR003726:IPR011005:IPR006158:IPR003759:IPR 017215:IPR000489; KEGG: swo:Swol_1442 5-methyltetrahydrofolate-homocysteine methyltransferase, truncation; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; SPTR: Q0AX05 Methionine synthase (B12-dependent); PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methyltransferase cognate c [...]


ensembl_gene_id: Slip_0735
symbol: Slip_0735
gene_biotype: protein_coding
description:
  Protein of unknown function DUF39; COGs: COG1900 conserved hypothetical protein; InterPro IPR002708; KEGG: swo:Swol_1441 hypothetical protein; PFAM: protein of unknown function DUF39; SPTR: Q0AX06 Conserved hypothetical cytosolic protein; PFAM: Domain of unknown function DUF39.


ensembl_gene_id: Slip_0736
symbol: Slip_0736
gene_biotype: protein_coding
description:
  NIL domain protein; InterProIPR009051:IPR017900:IPR018449:IPR001450:IPR 017896; KEGG: swo:Swol_1440 ferridoxin; PFAM: NIL domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AX07 Ferridoxin; PFAM: 4Fe-4S binding domain; NIL domain.


ensembl_gene_id: Slip_0737
symbol: Slip_0737
gene_biotype: protein_coding
description:
  ApbE family lipoprotein; COGs: COG2122 conserved hypothetical protein; InterPro IPR007183:IPR003374; KEGG: swo:Swol_1439 hypothetical protein; PFAM: ApbE family lipoprotein; SPTR: Q0AX08 Conserved hypothetical cytosolic protein; PFAM: ApbE family.


ensembl_gene_id: Slip_0738
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: Slip_0739
symbol: Slip_0739
gene_biotype: protein_coding
description:
  Protein of unknown function DUF28; COGs: COG0217 conserved hypothetical protein; InterPro IPR002876:IPR017856; KEGG: hor:Hore_12350 conserved hypothetical protein TIGR01033; PFAM: protein of unknown function DUF28; SPTR: B8CXG6 UPF0082 protein Hore_12350; PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033.


ensembl_gene_id: Slip_0740
symbol: Slip_0740
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1434 hypothetical protein; SPTR: Q0AX13 Putative uncharacterized protein; PFAM: Domain of unkown function (DUF1901).


ensembl_gene_id: Slip_0741
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Slip_0742
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Slip_0743
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Slip_0744
symbol: queH
gene_biotype: protein_coding
description:
  Protein of unknown function DUF208; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: Slip_0745
symbol: Slip_0745
gene_biotype: protein_coding
description:
  KEGG: drm:Dred_1664 hypothetical protein; SPTR: A4J539 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2905).


ensembl_gene_id: Slip_0746
symbol: Slip_0746
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: swo:Swol_0944 putative RNA polymerase sigma factor SigI; SPTR: Q0AYE5 RNA polymerase sigma factor.


ensembl_gene_id: Slip_0748
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Slip_0749
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: Slip_0750
symbol: Slip_0750
gene_biotype: protein_coding
description:
  COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: swo:Swol_1427 preprotein translocase YajC subunit; PFAM: YajC family protein; SPTR: Q0AX20 Protein translocase subunit yajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit.


ensembl_gene_id: Slip_0751
symbol: Slip_0751
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG3294 conserved hypothetical protein; InterPro IPR003607:IPR006674:IPR006675; KEGG: swo:Swol_1426 HDIG domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q0AX21 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Slip_0752
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Slip_0753
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Slip_0754
symbol: Slip_0754
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: swo:Swol_1916 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q0AVP1 Glycosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Slip_0755
symbol: Slip_0755
gene_biotype: protein_coding
description:
  InterPro IPR008928; KEGG: swo:Swol_1917 hypothetical protein; SPTR: Q0AVP0 Putative uncharacterized protein.


ensembl_gene_id: Slip_0757
symbol: Slip_0757
gene_biotype: protein_coding
description:
  COGs: COG2109 ATP:corrinoid adenosyltransferase; InterPro IPR003724; KEGG: pth:PTH_1324 ATP:corrinoid adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: A5D2M1 ATP:corrinoid adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase.


ensembl_gene_id: Slip_0758
symbol: Slip_0758
gene_biotype: protein_coding
description:
  COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR016176:IPR014348:IPR006099:IPR006098; KEGG: drm:Dred_1768 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: A4J5E0 Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain.


ensembl_gene_id: Slip_0759
symbol: Slip_0759
gene_biotype: protein_coding
description:
  Cobalamin B12-binding domain protein; COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006158:IPR006159; KEGG: dae:Dtox_1910 cobalamin B12-binding domain protein; PFAM: cobalamin B12-binding domain protein; SPTR: C8VXU5 Cobalamin B12-binding domain protein; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain.


ensembl_gene_id: Slip_0761
symbol: Slip_0761
gene_biotype: protein_coding
description:
  Beta-galactosidase; COGs: COG3934 Endo-beta-mannanase; InterPro IPR017853:IPR013781; KEGG: swo:Swol_1899 beta-galactosidase; SPTR: Q0AVQ8 Beta-galactosidase; PFAM: Beta-galactosidase.


ensembl_gene_id: Slip_0762
symbol: Slip_0762
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rmr:Rmar_2613 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: D0MFZ7 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; Mannose-6-phosphate isomerase.


ensembl_gene_id: Slip_0763
symbol: Slip_0763
gene_biotype: protein_coding
description:
  Glycosidase-related protein; COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: swo:Swol_1919 glycosylase-like protein; PFAM: glycosidase PH1107-related; SPTR: Q0AVN8 Glycosylase-like protein; PFAM: Domain of unknown function (DUF377).


ensembl_gene_id: Slip_0764
symbol: Slip_0764
gene_biotype: protein_coding
description:
  COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835:IPR001538; KEGG: swo:Swol_1914 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Q0AVP3 Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.


ensembl_gene_id: Slip_0765
symbol: Slip_0765
gene_biotype: protein_coding
description:
  Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; COGs: COG1109 Phosphomannomutase; InterProIPR016055:IPR016066:IPR005841:IPR005844:IPR 005845:IPR005846:IPR005843; KEGG: swo:Swol_2154 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Q0AV09 Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phos [...]


ensembl_gene_id: Slip_0766
symbol: Slip_0766
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR010916:IPR002524; KEGG: chy:CHY_0502 cation efflux family protein; PFAM: cation efflux protein; SPTR: Q3AES4 Cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: Slip_0767
symbol: Slip_0767
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: swo:Swol_0805 single-stranded DNA-specific exonuclease-like protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Q0AYS8 Single-stranded DNA-specific exonuclease-like protein; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ.


ensembl_gene_id: Slip_0768
symbol: Slip_0768
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Slip_0769
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Slip_0770
symbol: Slip_0770
gene_biotype: protein_coding
description:
  Beta-lactamase-like protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: swo:Swol_0808 beta-lactamase-like protein; SPTR: Q0AYS5 Beta-lactamase-like protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_0771
symbol: Slip_0771
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR013785:IPR006218:IPR006268; KEGG: swo:Swol_0809 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Q0AYS4 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.


ensembl_gene_id: Slip_0772
symbol: Slip_0772
gene_biotype: protein_coding
description:
  COGs: COG0077 Prephenate dehydratase; InterPro IPR018528:IPR001086; KEGG: swo:Swol_0810 prephenate dehydratase; PFAM: prephenate dehydratase; SPTR: Q0AYS3 Prephenate dehydratase; PFAM: Prephenate dehydratase.


ensembl_gene_id: Slip_0773
symbol: Slip_0773
gene_biotype: protein_coding
description:
  COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR013785:IPR007197; KEGG: drm:Dred_2881 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A4J8I2 Coproporphyrinogen III oxidase, anaerobic; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_0774
symbol: hisS
gene_biotype: protein_coding
description:
  COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR004154:IPR004516:IPR002314:IPR015807:IPR 006195; KEGG: swo:Swol_0811 histidine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: Q0AYS2 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase.


ensembl_gene_id: Slip_0775
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Slip_0776
symbol: Slip_0776
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR009036:IPR016040:IPR000594; KEGG: swo:Swol_0813 hypothetical protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: C0CPG2 Putative uncharacterized protein; manually curated; PFAM: ThiF family.


ensembl_gene_id: Slip_0777
symbol: Slip_0777
gene_biotype: protein_coding
description:
  thiamineS protein; InterPro IPR016155; KEGG: sfu:Sfum_2286 thiamineS protein; SPTR: A0LKL6 ThiamineS protein; PFAM: ThiS family.


ensembl_gene_id: Slip_0778
symbol: Slip_0778
gene_biotype: protein_coding
description:
  Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: Slip_0779
symbol: Slip_0779
gene_biotype: protein_coding
description:
  COGs: COG4747 ACT domain-containing protein; InterPro IPR002912; KEGG: swo:Swol_0816 amino acid-binding ACT; PFAM: amino acid-binding ACT domain protein; SPTR: Q0AYR7 ACT domain protein; PFAM: ACT domain.


ensembl_gene_id: Slip_0780
symbol: Slip_0780
gene_biotype: protein_coding
description:
  COGs: COG4978 Transcriptional regulator effector-binding domain/component; InterPro IPR011256:IPR010499; KEGG: str:Sterm_3611 transcriptional regulator, MerR family; PFAM: transcription activator effector binding; SPTR: C6PRQ6 Transcriptional regulator, MerR family; PFAM: Bacterial transcription activator, effector binding domain.


ensembl_gene_id: Slip_0781
symbol: Slip_0781
gene_biotype: protein_coding
description:
  PHP domain protein; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR003141:IPR016195:IPR004013; KEGG: nth:Nther_2823 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: C0GGU4 PHP domain protein; PFAM: PHP domain.


ensembl_gene_id: Slip_0782
symbol: Slip_0782
gene_biotype: protein_coding
description:
  COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR013785:IPR002915; KEGG: pth:PTH_0625 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Fructose-bisphosphate aldolase; SPTR: A5D4M2 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; PFAM: DeoC/LacD family aldolase.


ensembl_gene_id: Slip_0783
symbol: Slip_0783
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase GroES domain protein; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR011032:IPR016040:IPR002328:IPR013154:IPR 013149; KEGG: dae:Dtox_2740 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: C8W1P7 Alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.


ensembl_gene_id: Slip_0784
symbol: trpF
gene_biotype: protein_coding
description:
  COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR011060:IPR013785:IPR001240; KEGG: pth:PTH_0623 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: A5D4M0 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.


ensembl_gene_id: Slip_0785
symbol: Slip_0785
gene_biotype: protein_coding
description:
  COGs: COG1907 sugar kinase; InterPro IPR020568; KEGG: pth:PTH_0622 sugar kinases; SPTR: A5D4L9 Predicted archaeal sugar kinases; TIGRFAM: beta-RFAP synthase.


ensembl_gene_id: Slip_0786
symbol: mraZ
gene_biotype: protein_coding
description:
  MraZ protein; COGs: COG2001 conserved hypothetical protein; InterPro IPR020603:IPR003444; KEGG: swo:Swol_0817 hypothetical protein; PFAM: MraZ domain; SPTR: Q0AYR6 Protein mraZ; TIGRFAM: MraZ protein; PFAM: MraZ protein; TIGRFAM: mraZ protein; Belongs to the MraZ family.


ensembl_gene_id: Slip_0787
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Slip_0789
symbol: Slip_0789
gene_biotype: protein_coding
description:
  COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterProIPR005543:IPR012338:IPR005311:IPR001460:IPR 011927; KEGG: swo:Swol_0820 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA domain containing protein; SPTR: Q0AYR4 Peptidoglycan glycosyltransferase; TIGRFAM: stage V sporulation protein D; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PA [...]


ensembl_gene_id: Slip_0790
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Slip_0791
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/ D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Slip_0792
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide-transferas e; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Slip_0793
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Slip_0794
symbol: Slip_0794
gene_biotype: protein_coding
description:
  COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR006162:IPR018365:IPR001182:IPR013437; KEGG: swo:Swol_0825 cell cycle protein; PFAM: cell cycle protein; SPTR: Q0AYQ9 Cell cycle protein; TIGRFAM: cell division protein FtsW; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW; Belongs to the SEDS family.


ensembl_gene_id: Slip_0795
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Slip_0797
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Slip_0798
symbol: Slip_0798
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase, low molecular weight; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: dth:DICTH_0400 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: B5YCM4 Arsenate reductase; PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin).


ensembl_gene_id: Slip_0799
symbol: Slip_0799
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; InterPro IPR001845:IPR018334:IPR011991; KEGG: swo:Swol_2087 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q0AV75 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.


ensembl_gene_id: Slip_0800
symbol: Slip_0800
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR018303:IPR017969:IPR001366:IPR 001757:IPR008250:IPR005834:IPR006404:IPR006416; KEGG: swo:Swol_2086 cadmium-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Q0AV76 Cadmium-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal- [...]


ensembl_gene_id: Slip_0802
symbol: Slip_0802
gene_biotype: protein_coding
description:
  Protein of unknown function DUF881; COGs: COG3879 conserved hypothetical protein; InterPro IPR010273; KEGG: swo:Swol_0830 hypothetical protein; PFAM: protein of unknown function DUF881; SPTR: Q0AYQ4 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF881).


ensembl_gene_id: Slip_0803
symbol: Slip_0803
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1290; COGs: COG3856 conserved hypothetical protein (small basic protein); InterPro IPR009709; KEGG: swo:Swol_0831 hypothetical protein; PFAM: protein of unknown function DUF1290; SPTR: Q0AYQ3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1290).


ensembl_gene_id: Slip_0804
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: Slip_0805
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Slip_0806
symbol: Slip_0806
gene_biotype: protein_coding
description:
  Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: Slip_0810
symbol: Slip_0810
gene_biotype: protein_coding
description:
  Sporulation protein, YlmC/YmxH family; InterPro IPR011033:IPR007903:IPR014238; KEGG: swo:Swol_0948 hypothetical protein; PFAM: PRC-barrel domain protein; SPTR: Q0AYE1 Putative uncharacterized protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family.


ensembl_gene_id: Slip_0811
symbol: nrdR
gene_biotype: protein_coding
description:
  ATP-cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Slip_0812
symbol: Slip_0812
gene_biotype: protein_coding
description:
  COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR005144:IPR012833; KEGG: pth:PTH_1842 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein; PRIAM: Ribonucleoside-triphosphate reductase; SPTR: A5D164 Oxygen-sensitive ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP cone domain; Protein of unknown function (DUF3029); TIGRFAM: anaerobic ribonucleoside-triphosphate reductase.


ensembl_gene_id: Slip_0813
symbol: Slip_0813
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: Slip_0814
symbol: Slip_0814
gene_biotype: protein_coding
description:
  Protein of unknown function DUF152; COGs: COG1496 conserved hypothetical protein; InterPro IPR011324:IPR003730; KEGG: dae:Dtox_1076 protein of unknown function DUF152; PFAM: protein of unknown function DUF152; SPTR: C8W494 Putative uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: Slip_0815
symbol: Slip_0815
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: swo:Swol_0951 response regulator receiver protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q0AYD8 Response regulator receiver protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Slip_0816
symbol: Slip_0816
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterProIPR000014:IPR003661:IPR003594:IPR009082:IPR 004358:IPR013656:IPR005467; KEGG: swo:Swol_0952 sensory box histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Q0AYD7 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS do [...]


ensembl_gene_id: Slip_0817
symbol: Slip_0817
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_0857 hypothetical protein; SPTR: Q2RK65 Putative uncharacterized protein; TIGRFAM: putative membrane fusion protein.


ensembl_gene_id: Slip_0818
symbol: Slip_0818
gene_biotype: protein_coding
description:
  Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Slip_0819
symbol: sepF
gene_biotype: protein_coding
description:
  Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: Slip_0820
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Slip_0821
symbol: Slip_0821
gene_biotype: protein_coding
description:
  InterPro IPR003425; KEGG: swo:Swol_0956 protein of unknown function YGGT; PFAM: protein of unknown function YGGT; SPTR: Q0AYD3 Putative uncharacterized protein; PFAM: YGGT family.


ensembl_gene_id: Slip_0822
symbol: Slip_0822
gene_biotype: protein_coding
description:
  Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: swo:Swol_0957 collagenase-like protease; PFAM: peptidase U32; SPTR: Q0AYD2 Collagenase and related proteases-like protein; PFAM: Peptidase family U32.


ensembl_gene_id: Slip_0823
symbol: Slip_0823
gene_biotype: protein_coding
description:
  DivIVA domain protein; InterPro IPR007793:IPR019933; KEGG: swo:Swol_0958 cell division initiation protein; PFAM: DivIVA family protein; SPTR: Q0AYD1 Cell division initiation protein; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain.


ensembl_gene_id: Slip_0824
symbol: Slip_0824
gene_biotype: protein_coding
description:
  Protein of unknown function DUF167; COGs: COG1872 conserved hypothetical protein; InterPro IPR003746:IPR005228; KEGG: cts:Ctha_0036 protein of unknown function DUF167; PFAM: protein of unknown function DUF167; SPTR: B3QSB7 Putative uncharacterized protein; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: conserved hypothetical protein TIGR00251; Belongs to the UPF0235 family.


ensembl_gene_id: Slip_0825
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Slip_0827
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Slip_0828
symbol: Slip_0828
gene_biotype: protein_coding
description:
  COGs: COG3830 ACT domain-containing protein; InterPro IPR002912; KEGG: pth:PTH_0988 hypothetical protein; PFAM: amino acid-binding ACT domain protein; SPTR: C0GHW5 ACT domain-containing protein; PFAM: ACT domain; Belongs to the UPF0237 family.


ensembl_gene_id: Slip_0829
symbol: Slip_0829
gene_biotype: protein_coding
description:
  Protein of unknown function DUF711; COGs: COG2848 conserved hypothetical protein; InterPro IPR007841; KEGG: mta:Moth_1377 hypothetical protein; PFAM: protein of unknown function DUF711; SPTR: Q2RIP9 Putative uncharacterized protein; PFAM: Uncharacterized ACR (DUF711).


ensembl_gene_id: Slip_0830
symbol: Slip_0830
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: glo:Glov_0123 nitroreductase; PFAM: nitroreductase; SPTR: B3EA32 Nitroreductase; PFAM: Nitroreductase family.


ensembl_gene_id: Slip_0831
symbol: Slip_0831
gene_biotype: protein_coding
description:
  Protein of unknown function DUF169; COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: afw:Anae109_4088 hypothetical protein; PFAM: protein of unknown function DUF169; SPTR: C0GJP9 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043.


ensembl_gene_id: Slip_0833
symbol: Slip_0833
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; COGs: COG1734 DnaK suppressor protein; InterPro IPR020458:IPR000962; KEGG: swo:Swol_0964 TraR/DksA family transcriptional regulator; SPTR: Q0AYC5 Transcriptional regulators, TraR/DksA family; PFAM: Prokaryotic dksA/traR C4-type zinc finger.


ensembl_gene_id: Slip_0834
symbol: Slip_0834
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: swo:Swol_0965 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Q0AYC4 1,2-diacylglycerol 3-glucosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Slip_0835
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Slip_0836
symbol: Slip_0836
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Slip_0837
symbol: pyrR
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: Slip_0838
symbol: pyrB
gene_biotype: protein_coding
description:
  COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006130:IPR002082:IPR006132:IPR006131; KEGG: swo:Swol_1284 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: Q0AXG1 Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate ca [...]


ensembl_gene_id: Slip_0839
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: Slip_0840
symbol: pyrK
gene_biotype: protein_coding
description:
  Oxidoreductase FAD/NAD(P)-binding domain protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: Slip_0842
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: Slip_0843
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Slip_0844
symbol: Slip_0844
gene_biotype: protein_coding
description:
  COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: swo:Swol_1275 RNA-binding protein-like protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: Q0AXH0 RNA-binding protein-like protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA).


ensembl_gene_id: Slip_0846
symbol: Slip_0846
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763:IPR016156:IPR004099:IPR013027; KEGG: afl:Aflv_0303 multidomain redox protein (NAD(FAD)-dependent oxidoreductase; rhodanese domain; SirA-like redox domain; peroxiredoxin domain); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: B7GG08 Multidomain redox protein (NAD(FAD)-dependent oxidoreductase; Rhodanese domain; S [...]


ensembl_gene_id: Slip_0847
symbol: Slip_0847
gene_biotype: protein_coding
description:
  TOBE domain protein; InterPro IPR008995:IPR005116; KEGG: swo:Swol_1488 hypothetical protein; PFAM: TOBE domain protein; SPTR: Q0AWW2 Putative uncharacterized protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain.


ensembl_gene_id: Slip_0849
symbol: Slip_0849
gene_biotype: protein_coding
description:
  ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterProIPR018303:IPR001757:IPR000695:IPR004014:IPR 008250:IPR005834:IPR006068; KEGG: swo:Swol_1240 hypothetical protein; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Q0AXK5 Putative uncharacterized protein; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalo [...]


ensembl_gene_id: Slip_0850
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Slip_0851
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: Slip_0852
symbol: Slip_0852
gene_biotype: protein_coding
description:
  YicC domain protein; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: swo:Swol_1239 hypothetical protein; PFAM: YicC domain protein; domain of unknown function DUF1732; SPTR: Q0AXK6 Putative uncharacterized protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255.


ensembl_gene_id: Slip_0853
symbol: Slip_0853
gene_biotype: protein_coding
description:
  Protein of unknown function DUF370; COGs: COG2052 conserved hypothetical protein; InterPro IPR007169; KEGG: swo:Swol_1238 hypothetical protein; PFAM: protein of unknown function DUF370; SPTR: Q0AXK7 UPF0296 protein Swol_1238; PFAM: Domain of unknown function (DUF370); Belongs to the RemA family.


ensembl_gene_id: Slip_0855
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Slip_0856
symbol: Slip_0856
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Slip_0857
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Slip_0858
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Slip_0859
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Slip_0860
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Slip_0861
symbol: Slip_0861
gene_biotype: protein_coding
description:
  Protein of unknown function DUF116; COGs: COG1852 conserved hypothetical protein; InterPro IPR002829; KEGG: swo:Swol_1230 hypothetical protein; PFAM: protein of unknown function DUF116; SPTR: Q0AXL5 Putative uncharacterized protein; PFAM: Protein of unknown function DUF116.


ensembl_gene_id: Slip_0862
symbol: Slip_0862
gene_biotype: protein_coding
description:
  Peptidase membrane zinc metallopeptidase putative; COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: dtu:Dtur_1438 peptidase membrane zinc metallopeptidase putative; PFAM: peptidase membrane zinc metallopeptidase putative; SPTR: B8E0X5 Peptidase membrane zinc metallopeptidase putative; PFAM: Putative neutral zinc metallopeptidase.


ensembl_gene_id: Slip_0864
symbol: rlmN
gene_biotype: protein_coding
description:
  Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: Slip_0865
symbol: Slip_0865
gene_biotype: protein_coding
description:
  COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: swo:Swol_1226 serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: Q0AXL9 Serine/threonine phosphatase; PFAM: Protein phosphatase 2C.


ensembl_gene_id: Slip_0866
symbol: Slip_0866
gene_biotype: protein_coding
description:
  COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635:IPR002290:IPR005543:IPR011009:IPR 017441:IPR008271:IPR017442:IPR000719; KEGG: swo:Swol_1225 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA domain containing protein; SPTR: Q0AXM0 Serine/threonine protein kinase; PFAM: Protein kinase domain; PASTA domain.


ensembl_gene_id: Slip_0867
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Slip_0868
symbol: Slip_0868
gene_biotype: protein_coding
description:
  COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR011060:IPR000056:IPR013785; KEGG: swo:Swol_1223 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Q0AXM2 Ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.


ensembl_gene_id: Slip_0869
symbol: Slip_0869
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Slip_0870
symbol: Slip_0870
gene_biotype: protein_coding
description:
  COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR017938:IPR001783; KEGG: swo:Swol_1221 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Q8GDW2 Riboflavin synthase alpha chain (Fragment); TIGRFAM: riboflavin synthase, alpha subunit; manually curated; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit.


ensembl_gene_id: Slip_0871
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: Slip_0872
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: Slip_0873
symbol: Slip_0873
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: swo:Swol_0269 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Q0B087 Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Slip_0874
symbol: Slip_0874
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006089:IPR013786:IPR 006091:IPR013764:IPR006092:IPR006090; KEGG: swo:Swol_0268 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q0B088 Butyryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_0875
symbol: Slip_0875
gene_biotype: protein_coding
description:
  COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR000049:IPR012255:IPR014729:IPR014730; KEGG: pth:PTH_1768 electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: A5D1D7 Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.


ensembl_gene_id: Slip_0876
symbol: Slip_0876
gene_biotype: protein_coding
description:
  COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308:IPR014729:IPR014730:IPR014731; KEGG: pth:PTH_0017 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: A5D6D9 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: Slip_0877
symbol: Slip_0877
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR019756:IPR003042:IPR006076; KEGG: pth:PTH_0018 dehydrogenases; PFAM: FAD dependent oxidoreductase; SPTR: A5D6E0 Dehydrogenases; PFAM: HI0933-like protein.


ensembl_gene_id: Slip_0878
symbol: Slip_0878
gene_biotype: protein_coding
description:
  COGs: COG2440 Ferredoxin-like protein; InterPro IPR017900:IPR012206:IPR017896; KEGG: sfu:Sfum_3926 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: A0LQ93 4Fe-4S ferredoxin, iron-sulfur binding domain protein.


ensembl_gene_id: Slip_0879
symbol: Slip_0879
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000644:IPR000014:IPR003593:IPR009057:IPR 002078:IPR012287:IPR013767:IPR002197:IPR000700; KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: CBS domain containing protein; PAS domain containing protein; AAA ATPase; SPTR: Q0AWW3 Sigma-L-dependent trans [...]


ensembl_gene_id: Slip_0880
symbol: Slip_0880
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: swo:Swol_2051 acetyl-CoA C-acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Q0AVA9 Acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Slip_0881
symbol: Slip_0881
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006089:IPR013786:IPR 006091:IPR013764:IPR006090; KEGG: swo:Swol_2052 hypothetical protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q0AVA8 Putative uncharacterized protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.


ensembl_gene_id: Slip_0882
symbol: Slip_0882
gene_biotype: protein_coding
description:
  COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: pca:Pcar_2447 putative acetyl-CoA hydrolase; PFAM: acetyl-CoA hydrolase/transferase; SPTR: Q3A1S1 Putative acetyl-CoA hydrolase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.


ensembl_gene_id: Slip_0883
symbol: Slip_0883
gene_biotype: protein_coding
description:
  Putative sigma54 specific transcriptional regulator; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000644:IPR000014:IPR003593:IPR009057:IPR 002078:IPR012287:IPR013767:IPR000700; KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; SMART: CBS domain containing protein; PAS domain containing protein; AAA ATPase; SPTR: Q0AWW3 Sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFA [...]


ensembl_gene_id: Slip_0884
symbol: Slip_0884
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006089:IPR013786:IPR 006091:IPR013764:IPR006092:IPR006090; KEGG: gyc:GYMC61_3450 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q5KUF8 Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Slip_0885
symbol: Slip_0885
gene_biotype: protein_coding
description:
  COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR000160:IPR011006; KEGG: cyh:Cyan8802_1169 response regulator receiver modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; response regulator receiver; SPTR: C7QN79 Response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Slip_0886
symbol: Slip_0886
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dia:Dtpsy_3297 magnesium and cobalt transport protein CorA; SPTR: C6MLA7 Response regulator receiver modulated diguanylate cyclase.


ensembl_gene_id: Slip_0887
symbol: Slip_0887
gene_biotype: protein_coding
description:
  InterPro IPR012854; KEGG: drm:Dred_1644 copper amine oxidase domain-containing protein; PFAM: copper amine oxidase domain protein; SPTR: A4J519 Copper amine oxidase domain protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_0888
symbol: rpmB
gene_biotype: protein_coding
description:
  COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: swo:Swol_0757 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: Q0AYX5 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: Slip_0889
symbol: Slip_0889
gene_biotype: protein_coding
description:
  Protein of unknown function DUF322; COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: swo:Swol_0758 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: Q0AYX4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322).


ensembl_gene_id: Slip_0890
symbol: Slip_0890
gene_biotype: protein_coding
description:
  DAK2 domain fusion protein YloV; COGs: COG1461 kinase related to dihydroxyacetone kinase; InterPro IPR004007:IPR019986; KEGG: swo:Swol_0759 hypothetical protein; PFAM: Dak phosphatase; SPTR: Q0AYX3 Putative uncharacterized protein; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV.


ensembl_gene_id: Slip_0891
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Slip_0892
symbol: Slip_0892
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; SPTR: B0NWV3 Putative uncharacterized protein; PFAM: Small, acid-soluble spore proteins, alpha/beta type.


ensembl_gene_id: Slip_0893
symbol: Slip_0893
gene_biotype: protein_coding
description:
  InterPro IPR001448; KEGG: swo:Swol_0760 small acid-soluble spore protein; PFAM: small acid-soluble spore protein alpha/beta type; SPTR: Q0AYX2 Small acid-soluble spore protein; PFAM: Small, acid-soluble spore proteins, alpha/beta type.


ensembl_gene_id: Slip_0894
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: Slip_0895
symbol: Slip_0895
gene_biotype: protein_coding
description:
  Methyltransferase; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR002052:IPR004398:IPR016065; KEGG: hmo:HM1_2153 methyltransferase, putative; PFAM: Protein of unknown function methylase putative; SPTR: B0TGU8 Methyltransferase, putative; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family.


ensembl_gene_id: Slip_0896
symbol: Slip_0896
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0763 vacuolar-type H+-ATPase subunit H; SPTR: Q0AYX0 Vacuolar-type H+-ATPase subunit H.


ensembl_gene_id: Slip_0898
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: Slip_0899
symbol: Slip_0899
gene_biotype: protein_coding
description:
  Sporulation integral membrane protein YlbJ; COGs: COG3314 conserved hypothetical protein; InterPro IPR011642:IPR014226; KEGG: swo:Swol_0764 hypothetical protein; PFAM: nucleoside recognition domain protein; SPTR: Q0AYW9 Putative uncharacterized protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ.


ensembl_gene_id: Slip_0900
symbol: Slip_0900
gene_biotype: protein_coding
description:
  Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: swo:Swol_0765 phospholipase, putative; PFAM: Patatin; SPTR: Q0AYW8 Phospholipase, putative; PFAM: Patatin-like phospholipase.


ensembl_gene_id: Slip_0901
symbol: tmcAL
gene_biotype: protein_coding
description:
  Protein of unknown function DUF795; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: Slip_0902
symbol: Slip_0902
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR012147:IPR002505:IPR004614; KEGG: swo:Swol_0767 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; SPTR: Q0AYW6 Phosphotransacetylase; TIGRFAM: phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase.


ensembl_gene_id: Slip_0903
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Slip_0904
symbol: Slip_0904
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1633 conserved hypothetical protein; InterPro IPR009078:IPR003251; KEGG: bcg:BCG9842_B2134 YhjR; PFAM: Rubrerythrin; SPTR: C1P7C4 Rubrerythrin.


ensembl_gene_id: Slip_0905
symbol: Slip_0905
gene_biotype: protein_coding
description:
  Putative helix-turn-helix protein YlxM/p13 family protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: Slip_0906
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: Slip_0907
symbol: rpsP
gene_biotype: protein_coding
description:
  COGs: COG0228 Ribosomal protein S16; InterPro IPR000307:IPR020592; KEGG: swo:Swol_1497 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: Q0AWV4 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: Slip_0908
symbol: Slip_0908
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1837 RNA-binding protein (contains KH domain); InterPro IPR009019:IPR004088; KEGG: ckr:CKR_1299 hypothetical protein; SPTR: B9E1H5 Putative uncharacterized protein; Belongs to the UPF0109 family.


ensembl_gene_id: Slip_0909
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: Slip_0910
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: Slip_0911
symbol: Slip_0911
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2168; COGs: COG4752 conserved hypothetical protein; InterPro IPR019230; KEGG: swo:Swol_1492 hypothetical protein; PFAM: Protein of unknown function DUF2168; SPTR: Q0AWV8 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2168).


ensembl_gene_id: Slip_0912
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Slip_0913
symbol: Slip_0913
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: Slip_0915
symbol: Slip_0915
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1477 hypothetical protein; SPTR: Q0AWX2 Putative uncharacterized protein; PFAM: Flagellar hook-length control protein FliK.


ensembl_gene_id: Slip_0916
symbol: Slip_0916
gene_biotype: protein_coding
description:
  Type III secretion exporter; COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; InterPro IPR006135; KEGG: swo:Swol_1476 flagellar biosynthesis; PFAM: type III secretion exporter; SPTR: Q0AWX3 Flagellar biosynthesis; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein.


ensembl_gene_id: Slip_0917
symbol: Slip_0917
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0102; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR011335:IPR003509; KEGG: swo:Swol_1475 endonuclease; PFAM: protein of unknown function UPF0102; SPTR: Q0AWX4 UPF0102 protein Swol_1475; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252.


ensembl_gene_id: Slip_0918
symbol: nfo
gene_biotype: protein_coding
description:
  Apurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: Slip_0920
symbol: Slip_0920
gene_biotype: protein_coding
description:
  COGs: COG2099 Precorrin-6x reductase; InterPro IPR003723; KEGG: dae:Dtox_1297 precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; SPTR: A1HPX1 Precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase.


ensembl_gene_id: Slip_0921
symbol: Slip_0921
gene_biotype: protein_coding
description:
  COGs: COG1010 Precorrin-3B methylase; InterPro IPR000878:IPR014777:IPR006363; KEGG: mta:Moth_1094 precorrin-3 methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Q2RJI1 Precorrin-3 methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase.


ensembl_gene_id: Slip_0922
symbol: Slip_0922
gene_biotype: protein_coding
description:
  COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: tex:Teth514_0314 cobalamin biosynthesis protein CbiG; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; SPTR: C6PD90 Cobalamin (Vitamin B12) biosynthesis CbiG protein; PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal.


ensembl_gene_id: Slip_0923
symbol: Slip_0923
gene_biotype: protein_coding
description:
  COGs: COG2875 Precorrin-4 methylase; InterProIPR000878:IPR003043:IPR014777:IPR014776:IPR 006362; KEGG: hmo:HM1_2389 precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-4 C(11)-methyltransferase; SPTR: C5RMQ3 Precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase.


ensembl_gene_id: Slip_0925
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: Slip_0926
symbol: Slip_0926
gene_biotype: protein_coding
description:
  Precorrin-8X methylmutase; COGs: COG2082 Precorrin isomerase; InterPro IPR003722; KEGG: tex:Teth514_0308 precorrin-8X methylmutase CbiC/CobH; PFAM: Precorrin-8X methylmutase CbiC/CobH; PRIAM: Precorrin-8X methylmutase; SPTR: C6PHX2 Precorrin-8X methylmutase CbiC/CobH; PFAM: Precorrin-8X methylmutase.


ensembl_gene_id: Slip_0927
symbol: Slip_0927
gene_biotype: protein_coding
description:
  COGs: COG2243 Precorrin-2 methylase; InterPro IPR000878:IPR012382:IPR014777:IPR006364; KEGG: dae:Dtox_1293 precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: C8W686 Precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase.


ensembl_gene_id: Slip_0928
symbol: Slip_0928
gene_biotype: protein_coding
description:
  Sirohydrochlorin cobaltochelatase; COGs: COG4822 Cobalamin biosynthesis protein CbiK Co2+ chelatase; InterPro IPR010388; KEGG: ctc:CTC00743 anaerobic cobalt chelatase CbiK; PFAM: anaerobic cobalt chelatase; PRIAM: Sirohydrochlorin cobaltochelatase; SPTR: Q897J2 Anaerobic cobalt chelatase cbiK; PFAM: Cobalt chelatase (CbiK).


ensembl_gene_id: Slip_0929
symbol: Slip_0929
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: Slip_0930
symbol: Slip_0930
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, inner membrane subunit CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339:IPR012809; KEGG: cno:NT01CX_1331 cobalt transport protein; PFAM: cobalt transport protein; SPTR: A0PYG2 Cobalt transport protein; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.


ensembl_gene_id: Slip_0931
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: Slip_0932
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: Slip_0933
symbol: Slip_0933
gene_biotype: protein_coding
description:
  L-threonine-O-3-phosphate decarboxylase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR004839:IPR001176:IPR005860:IPR015424:IPR 015421:IPR015422; KEGG: cno:NT01CX_2083 L-threonine-O-3-phosphate decarboxylase, putative; PFAM: aminotransferase class I and II; SPTR: A0Q0K4 L-threonine-O-3-phosphate decarboxylase, putative; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase.


ensembl_gene_id: Slip_0934
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: Slip_0935
symbol: Slip_0935
gene_biotype: protein_coding
description:
  Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: swo:Swol_1295 rrf2 family protein; PFAM: protein of unknown function UPF0074; SPTR: Q0AXF1 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator).


ensembl_gene_id: Slip_0937
symbol: Slip_0937
gene_biotype: protein_coding
description:
  Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068:IPR008978; KEGG: cth:Cthe_0037 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: A3DBE9 Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family.


ensembl_gene_id: Slip_0938
symbol: Slip_0938
gene_biotype: protein_coding
description:
  Mg chelatase, subunit ChlI; COGs: COG0606 ATPase with chaperone activity; InterProIPR003593:IPR000523:IPR001208:IPR004482:IPR 020568; KEGG: swo:Swol_1445 Mg chelatase-related protein; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: Q0AX02 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein.


ensembl_gene_id: Slip_0939
symbol: Slip_0939
gene_biotype: protein_coding
description:
  Rubrerythrin; InterPro IPR003251:IPR009078:IPR012347; KEGG: tga:TGAM_1258 rubrerythrin-related protein (Rr); PFAM: Rubrerythrin; SPTR: C5A698 Rubrerythrin-related protein (Rr); PFAM: Rubrerythrin.


ensembl_gene_id: Slip_0941
symbol: Slip_0941
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0047; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: pth:PTH_0565 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: A5D4S3 Uncharacterized conserved protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149.


ensembl_gene_id: Slip_0943
symbol: Slip_0943
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: swo:Swol_0839 Rossmann-fold nucleotide-binding protein involved in DNA uptake; PFAM: SMF family protein; SPTR: Q0AYP6 Rossmann-fold nucleotide-binding protein involved in DNA uptake; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA.


ensembl_gene_id: Slip_0944
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: Slip_0945
symbol: trmFO
gene_biotype: protein_coding
description:
  Gid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: Slip_0946
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Slip_0947
symbol: hslV
gene_biotype: protein_coding
description:
  20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Slip_0948
symbol: hslU
gene_biotype: protein_coding
description:
  Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: Slip_0949
symbol: codY
gene_biotype: protein_coding
description:
  GTP-sensing pleiotropic transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: Slip_0950
symbol: Slip_0950
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Slip_0951
symbol: Slip_0951
gene_biotype: protein_coding
description:
  COGs: COG1558 Flagellar basal body rod protein; InterPro IPR019776:IPR001444:IPR010930:IPR006299; KEGG: cce:Ccel_2053 flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: A1HN44 Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Slip_0952
symbol: fliE
gene_biotype: protein_coding
description:
  COGs: COG1677 Flagellar hook-basal body protein; InterPro IPR001624; KEGG: swo:Swol_0848 flagellar hook-basal body protein; PFAM: flagellar hook-basal body complex protein FliE; SPTR: Q0AYN7 Flagellar hook-basal body protein; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.


ensembl_gene_id: Slip_0953
symbol: Slip_0953
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Slip_0954
symbol: Slip_0954
gene_biotype: protein_coding
description:
  COGs: COG1536 Flagellar motor switch protein; InterPro IPR006668:IPR000090:IPR011002; KEGG: hmo:HM1_2222 flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; MgtE intracellular region; SPTR: B0THA3 Flagellar motor switch protein flig; TIGRFAM: flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.


ensembl_gene_id: Slip_0955
symbol: Slip_0955
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliH/Type III secretion system HrpE; COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein; InterPro IPR018035; KEGG: swo:Swol_0851 flagellar biosynthesis/type III secretory pathway protein-like protein; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: Q0AYN5 Flagellar biosynthesis/type III secretory pathway protein-like protein; PFAM: Flagellar assembly protein FliH; TIGRFAM: prevent-host-death family protein.


ensembl_gene_id: Slip_0956
symbol: Slip_0956
gene_biotype: protein_coding
description:
  Flagellar protein export ATPase FliI; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterProIPR020003:IPR003593:IPR004100:IPR000194:IPR 005714:IPR020005; KEGG: swo:Swol_0852 sodium-transporting two-sector ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; SPTR: Q0AYN4 Type III secretion system ATPase, FliI/YscN; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP [...]


ensembl_gene_id: Slip_0957
symbol: Slip_0957
gene_biotype: protein_coding
description:
  Flagellar export protein FliJ; InterPro IPR012823; KEGG: swo:Swol_0853 hypothetical protein; SPTR: Q0AYN3 Putative uncharacterized protein; TIGRFAM: flagellar export protein FliJ; PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ.


ensembl_gene_id: Slip_0958
symbol: Slip_0958
gene_biotype: protein_coding
description:
  MgtE intracellular region; InterPro IPR006668; KEGG: swo:Swol_0854 hypothetical protein; PFAM: MgtE intracellular region; SPTR: Q0AYN2 Putative uncharacterized protein; PFAM: MgtE intracellular N domain.


ensembl_gene_id: Slip_0959
symbol: Slip_0959
gene_biotype: protein_coding
description:
  InterPro IPR001635; KEGG: swo:Swol_0855 flagellar hook-length control protein-like protein; PFAM: flagellar hook-length control protein; SPTR: Q0AYN1 Flagellar hook-length control protein-like protein; PFAM: Flagellar hook-length control protein FliK.


ensembl_gene_id: Slip_0960
symbol: Slip_0960
gene_biotype: protein_coding
description:
  COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: gym:GYMC10_4184 flagellar hook capping protein; PFAM: flagellar hook capping protein; SPTR: Q0AYN0 Flagellar hook capping protein-like protein; PFAM: Flagellar hook capping protein.


ensembl_gene_id: Slip_0961
symbol: Slip_0961
gene_biotype: protein_coding
description:
  Flagellar operon protein; InterPro IPR013367; KEGG: swo:Swol_0857 hypothetical protein; SPTR: A1HN33 Flagellar operon protein; TIGRFAM: flagellar operon protein; PFAM: Protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein.


ensembl_gene_id: Slip_0962
symbol: Slip_0962
gene_biotype: protein_coding
description:
  Fagellar hook-basal body protein; COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR001444:IPR011491:IPR010930:IPR020013; KEGG: swo:Swol_0858 flagellar hook protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body FlaE domain protein; SPTR: Q0AYM8 Flagellar hook protein; TIGRFAM: fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Slip_0963
symbol: Slip_0963
gene_biotype: protein_coding
description:
  Flagellar FlbD family protein; COGs: COG1582 Uncharacterized protein possibly involved in motility; InterPro IPR009384; KEGG: swo:Swol_0859 hypothetical protein; PFAM: flagellar FlbD family protein; SPTR: Q0AYM7 Putative uncharacterized protein; PFAM: Flagellar protein (FlbD).


ensembl_gene_id: Slip_0964
symbol: Slip_0964
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Slip_0965
symbol: Slip_0965
gene_biotype: protein_coding
description:
  COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543; KEGG: swo:Swol_0861 hypothetical protein; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: Q0AYM5 Putative uncharacterized protein; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.


ensembl_gene_id: Slip_0966
symbol: Slip_0966
gene_biotype: protein_coding
description:
  COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597:IPR001543:IPR001172:IPR012826; KEGG: swo:Swol_0862 CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; SPTR: Q0AYM4 CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN.


ensembl_gene_id: Slip_0967
symbol: Slip_0967
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: swo:Swol_0863 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q0AYM3 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Slip_0968
symbol: Slip_0968
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0864 hypothetical protein; SPTR: Q0AYM2 Putative uncharacterized protein; PFAM: Flagellar biosynthesis protein, FliO.


ensembl_gene_id: Slip_0969
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Slip_0970
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Slip_0971
symbol: Slip_0971
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Slip_0972
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Slip_0973
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Slip_0974
symbol: Slip_0974
gene_biotype: protein_coding
description:
  COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR003593:IPR000897:IPR020006; KEGG: swo:Swol_0870 hypothetical protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: Q0AYL6 Putative uncharacterized protein; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF.


ensembl_gene_id: Slip_0975
symbol: Slip_0975
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: swo:Swol_0871 ParA protein; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: Q0AYL5 ParA protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Slip_0976
symbol: Slip_0976
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; COGs: COG5581 glycosyltransferase; InterPro IPR009875; KEGG: swo:Swol_0872 glycosyltransferase-like protein; PFAM: type IV pilus assembly PilZ; SPTR: Q0AYL4 Glycosyltransferase-like protein; PFAM: PilZ domain.


ensembl_gene_id: Slip_0977
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Slip_0978
symbol: Slip_0978
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR003594:IPR002545:IPR010808:IPR 004105:IPR004358:IPR009082:IPR005467; KEGG: swo:Swol_0874 putative CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; P2 response regulator binding domain protein; Hpt domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SPTR: Q0AYL2 Putative CheA signal transduc [...]


ensembl_gene_id: Slip_0979
symbol: Slip_0979
gene_biotype: protein_coding
description:
  CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: swo:Swol_0875 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Q0AYL1 CheW protein; PFAM: CheW-like domain.


ensembl_gene_id: Slip_0980
symbol: Slip_0980
gene_biotype: protein_coding
description:
  COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: swo:Swol_0876 CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; SPTR: Q0AYL0 CheC, inhibitor of MCP methylation; PFAM: CheC-like family.


ensembl_gene_id: Slip_0981
symbol: cheD
gene_biotype: protein_coding
description:
  CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Slip_0982
symbol: Slip_0982
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR000943:IPR007627:IPR007624:IPR007630:IPR 014284:IPR012845:IPR013325:IPR013324:IPR011991; KEGG: swo:Swol_0878 putative RNA polymerase sigma factor; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; SPTR: Q0AYK8 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 regi [...]


ensembl_gene_id: Slip_0983
symbol: Slip_0983
gene_biotype: protein_coding
description:
  Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: swo:Swol_0879 hypothetical protein; PFAM: protein of unknown function DUF342; SPTR: Q0AYK7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).


ensembl_gene_id: Slip_0986
symbol: rpsB
gene_biotype: protein_coding
description:
  COGs: COG0052 Ribosomal protein S2; InterPro IPR018130:IPR001865:IPR005706; KEGG: swo:Swol_0882 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: Q0AYK4 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: Slip_0987
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Slip_0989
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Slip_0990
symbol: Slip_0990
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: Slip_0991
symbol: Slip_0991
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: swo:Swol_0887 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: Q0AYJ9 Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family; Belongs to the CDS family.


ensembl_gene_id: Slip_0992
symbol: Slip_0992
gene_biotype: protein_coding
description:
  Sporulation integral membrane protein YtvI; COGs: COG0628 permease; InterPro IPR002549:IPR014227; KEGG: swo:Swol_0888 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Q0AYJ8 Putative uncharacterized protein; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI.


ensembl_gene_id: Slip_0993
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: Slip_0994
symbol: Slip_0994
gene_biotype: protein_coding
description:
  Membrane-associated zinc metalloprotease; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478:IPR008915:IPR004387; KEGG: swo:Swol_0890 peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Q0AYJ6 Peptidase M50, putative membrane-associated zinc metallopeptidase; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.


ensembl_gene_id: Slip_0995
symbol: ispG
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: Slip_0996
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: Slip_0997
symbol: Slip_0997
gene_biotype: protein_coding
description:
  MgtC/SapB transporter; COGs: COG1285 membrane protein; InterPro IPR003416:IPR002912; KEGG: swo:Swol_0894 MgtC family protein; PFAM: MgtC/SapB transporter; amino acid-binding ACT domain protein; SPTR: Q0AYJ3 MgtC family protein; PFAM: MgtC family; ACT domain.


ensembl_gene_id: Slip_0998
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Slip_0999
symbol: rimP
gene_biotype: protein_coding
description:
  Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Slip_1000
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Slip_1001
symbol: Slip_1001
gene_biotype: protein_coding
description:
  Protein of unknown function DUF448; COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination; InterPro IPR007393; KEGG: pth:PTH_1267 nucleic acid-binding protein; PFAM: protein of unknown function DUF448; SPTR: A5D2V0 Predicted nucleic acid-binding protein; PFAM: Protein of unknown function (DUF448).


ensembl_gene_id: Slip_1002
symbol: Slip_1002
gene_biotype: protein_coding
description:
  COGs: COG1358 Ribosomal protein HS6-type (S12/L30/L7a); InterPro IPR004038; KEGG: sca:Sca_0903 putative ribosomal_L7Ae protein family protein; PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; SPTR: B9DPF4 Putative ribosomal_L7Ae protein family protein; PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family.


ensembl_gene_id: Slip_1003
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Slip_1004
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Slip_1005
symbol: Slip_1005
gene_biotype: protein_coding
description:
  Phosphoesterase RecJ domain protein; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: swo:Swol_0902 phosphoesterase, RecJ-like protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Q0AYI6 Phosphoesterase, RecJ-like protein; PFAM: DHH family; DHHA1 domain.


ensembl_gene_id: Slip_1006
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Slip_1007
symbol: Slip_1007
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterPro IPR015864:IPR015865:IPR002606:IPR014729; KEGG: swo:Swol_0904 riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Q0AYI4 Riboflavin kinase / FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.


ensembl_gene_id: Slip_1008
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: Slip_1009
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Slip_1010
symbol: Slip_1010
gene_biotype: protein_coding
description:
  VanW family protein; COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391; KEGG: swo:Swol_0907 hypothetical protein; PFAM: VanW family protein; SPTR: Q0AYI1 Putative uncharacterized protein; PFAM: VanW like protein.


ensembl_gene_id: Slip_1011
symbol: Slip_1011
gene_biotype: protein_coding
description:
  COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509:IPR011330; KEGG: swo:Swol_0908 xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase; SPTR: Q0AYI0 Xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase; TIGRFAM: probable sporulation protein, polysaccharide deacetylase family; polysaccharide deacetylase family sporulation protein PdaB.


ensembl_gene_id: Slip_1012
symbol: Slip_1012
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterPro IPR001967:IPR018044:IPR012338:IPR015956; KEGG: swo:Swol_0909 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: Q0AYH9 Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; Belongs to the peptidase S11 family.


ensembl_gene_id: Slip_1013
symbol: Slip_1013
gene_biotype: protein_coding
description:
  Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterProIPR001431:IPR011765:IPR007863:IPR011249:IPR 011237; KEGG: swo:Swol_0910 processing peptidase; PFAM: peptidase M16 domain protein; SPTR: Q0AYH8 Processing peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.


ensembl_gene_id: Slip_1014
symbol: Slip_1014
gene_biotype: protein_coding
description:
  InterPro IPR009875; KEGG: dhd:Dhaf_4131 type IV pilus assembly PilZ; PFAM: type IV pilus assembly PilZ; SPTR: Q24T82 Putative uncharacterized protein; PFAM: PilZ domain.


ensembl_gene_id: Slip_1015
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: Slip_1016
symbol: Slip_1016
gene_biotype: protein_coding
description:
  Sporulation protein, YlmC/YmxH family; InterPro IPR007903:IPR014238:IPR011033; KEGG: swo:Swol_0912 hypothetical protein; PFAM: PRC-barrel domain protein; SPTR: Q0AYH6 Putative uncharacterized protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family.


ensembl_gene_id: Slip_1017
symbol: Slip_1017
gene_biotype: protein_coding
description:
  Haloacid dehalogenase domain protein hydrolase; COGs: COG4087 Soluble P-type ATPase; InterPro IPR005834; KEGG: adg:Adeg_1236 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q2RJE0 Putative uncharacterized protein; PFAM: haloacid dehalogenase-like hydrolase.


ensembl_gene_id: Slip_1018
symbol: Slip_1018
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: asu:Asuc_1822 transport system permease protein; SPTR: A6VQC6 Transport system permease protein.


ensembl_gene_id: Slip_1019
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Slip_1020
symbol: Slip_1020
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: drm:Dred_0439 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A4J1N2 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Slip_1021
symbol: Slip_1021
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: ckr:CKR_2109 hypothetical protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B9E3T5 Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Slip_1022
symbol: Slip_1022
gene_biotype: protein_coding
description:
  NMT1/THI5 like domain protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR015168; KEGG: amt:Amet_1129 putative sulfonate/nitrate transport system substrate-binding protein; PFAM: NMT1/THI5 like domain protein; SPTR: A6TMC2 Putative sulfonate/nitrate transport system substrate-binding protein; PFAM: NMT1/THI5 like.


ensembl_gene_id: Slip_1023
symbol: Slip_1023
gene_biotype: protein_coding
description:
  InterPro IPR006140:IPR016040; KEGG: swo:Swol_1272 dipicolinate synthase subunit A; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; SPTR: Q0AXH3 Putative uncharacterized protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit.


ensembl_gene_id: Slip_1024
symbol: Slip_1024
gene_biotype: protein_coding
description:
  Dipicolinic acid synthetase, B subunit; InterPro IPR003382:IPR014214; KEGG: swo:Swol_1271 dipicolinate synthase subunit B; PFAM: flavoprotein; SPTR: Q0AXH4 Putative uncharacterized protein; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit.


ensembl_gene_id: Slip_1025
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Slip_1026
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Slip_1027
symbol: rnj
gene_biotype: protein_coding
description:
  RNA-metabolising metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: Slip_1028
symbol: Slip_1028
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017900:IPR001450:IPR009051:IPR017896; KEGG: dsa:Desal_2047 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C6BVD2 4Fe-4S ferredoxin iron-sulfur binding domain protein; TIGRFAM: iron-sulfur cluster binding protein, putative.


ensembl_gene_id: Slip_1029
symbol: Slip_1029
gene_biotype: protein_coding
description:
  Putative signal transduction protein with CBS domains; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: mta:Moth_1134 signal transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Q2RJE1 Putative signal transduction protein with CBS domains; PFAM: CBS domain.


ensembl_gene_id: Slip_1030
symbol: Slip_1030
gene_biotype: protein_coding
description:
  Drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR001411:IPR004638:IPR016196; KEGG: pth:PTH_2781 transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A5CYH9 Hypothetical transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Slip_1031
symbol: Slip_1031
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900:IPR006655:IPR000283:IPR001041:IPR 019574:IPR001450:IPR006963:IPR006656:IPR017896; KEGG: swo:Swol_0785 NADH dehydrogenase I chain G; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; SPTR: Q0AYU8 NADH dehydrogenase I chain G; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoredu [...]


ensembl_gene_id: Slip_1032
symbol: Slip_1032
gene_biotype: protein_coding
description:
  Formate dehydrogenase, alpha subunit; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR006656:IPR006657:IPR006478:IPR009010; KEGG: swo:Swol_0786 formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: Q0AYU7 Formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Slip_1033
symbol: Slip_1033
gene_biotype: protein_coding
description:
  Peptidase S14 ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907; KEGG: swo:Swol_1267 peptidase S14, ClpP; PFAM: peptidase S14 ClpP; SPTR: Q0AXH8 ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: Clp protease.


ensembl_gene_id: Slip_1035
symbol: Slip_1035
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: cac:CAC0443 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C4ILN2 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_1037
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: Slip_1038
symbol: Slip_1038
gene_biotype: protein_coding
description:
  Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593:IPR002543:IPR018541; KEGG: swo:Swol_1265 DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: Q0AXI0 DNA translocase FtsK; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.


ensembl_gene_id: Slip_1039
symbol: Slip_1039
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR000835:IPR011611:IPR000485; KEGG: swo:Swol_1264 hypothetical protein; PFAM: PfkB domain protein; regulatory protein MarR; SPTR: Q0AXI1 Putative uncharacterized protein; PFAM: pfkB family carbohydrate kinase.


ensembl_gene_id: Slip_1040
symbol: Slip_1040
gene_biotype: protein_coding
description:
  tRNA 2-selenouridine synthase; COGs: COG2603 ATPase; InterPro IPR001763:IPR017582; KEGG: dsy:DSY1972 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; SPTR: Q24W31 Putative uncharacterized protein; TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase.


ensembl_gene_id: Slip_1041
symbol: Slip_1041
gene_biotype: protein_coding
description:
  COGs: COG1426 conserved hypothetical protein; KEGG: swo:Swol_1263 hypothetical protein; SPTR: Q0AXI2 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Slip_1042
symbol: rimO
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Slip_1043
symbol: Slip_1043
gene_biotype: protein_coding
description:
  CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462:IPR004570; KEGG: swo:Swol_1261 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; PRIAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; SPTR: Q0AXI4 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; manually curated; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacy [...]


ensembl_gene_id: Slip_1044
symbol: Slip_1044
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1259 hypothetical protein; SPTR: Q0AXI6 Putative uncharacterized protein; PFAM: Heavy-metal-associated domain.


ensembl_gene_id: Slip_1045
symbol: Slip_1045
gene_biotype: protein_coding
description:
  Vesicle-fusing ATPase; COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003960:IPR003593:IPR003959:IPR000642; KEGG: swo:Swol_1258 vesicle-fusing ATPase; PFAM: AAA ATPase central domain protein; peptidase M41; PRIAM: Vesicle-fusing ATPase; SMART: AAA ATPase; SPTR: Q0AXI7 Vesicle-fusing ATPase; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family.


ensembl_gene_id: Slip_1046
symbol: Slip_1046
gene_biotype: protein_coding
description:
  Plasmid stabilization system; InterPro IPR007712; KEGG: dae:Dtox_2782 plasmid stabilization system; PFAM: plasmid stabilization system; SPTR: C8W1T1 Plasmid stabilization system; PFAM: Plasmid stabilisation system protein.


ensembl_gene_id: Slip_1048
symbol: cinA
gene_biotype: protein_coding
description:
  Competence/damage-inducible protein CinA; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453:IPR008136:IPR008135; KEGG: swo:Swol_1257 hypothetical protein; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: Q0AXI8 CinA-like protein; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain.


ensembl_gene_id: Slip_1049
symbol: Slip_1049
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Slip_1050
symbol: recA
gene_biotype: protein_coding
description:
  recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Slip_1051
symbol: rny
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: Slip_1052
symbol: Slip_1052
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COGs: COG1692 conserved hypothetical protein; InterPro IPR004843:IPR005235; KEGG: swo:Swol_1251 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Q0AXJ4 Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: conserved hypothetical protein TIGR00282.


ensembl_gene_id: Slip_1053
symbol: Slip_1053
gene_biotype: protein_coding
description:
  COGs: COG2359 conserved hypothetical protein; InterPro IPR007347; KEGG: swo:Swol_1250 stage V sporulation protein S; PFAM: Stage V sporulation protein S; SPTR: Q0AXJ5 Stage V sporulation protein S; PFAM: Stage V sporulation protein S (SpoVS).


ensembl_gene_id: Slip_1054
symbol: Slip_1054
gene_biotype: protein_coding
description:
  COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR000180:IPR008257; KEGG: swo:Swol_1249 Zn-dependent dipeptidase, microsomal dipeptidase-like protein; PFAM: peptidase M19 renal dipeptidase; PRIAM: Membrane dipeptidase; SPTR: Q0AXJ6 Thermostable dipeptidase. Metallo peptidase. MEROPS family M19; PFAM: Membrane dipeptidase (Peptidase family M19).


ensembl_gene_id: Slip_1055
symbol: Slip_1055
gene_biotype: protein_coding
description:
  PHP domain protein; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR003141:IPR004013:IPR016195; KEGG: swo:Swol_1248 PHP family metal-dependent phosphoesterase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: Q0AXJ7 Metal-dependent phosphoesterases (PHP family); PFAM: PHP domain.


ensembl_gene_id: Slip_1056
symbol: Slip_1056
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR000683:IPR016040; KEGG: swo:Swol_1840 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; oxidoreductase domain protein; SMART: chemotaxis sensory transducer; SPTR: Q0AVW6 Putative methyl-accepting chemotaxis sensory transducer; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Slip_1057
symbol: Slip_1057
gene_biotype: protein_coding
description:
  NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR002482:IPR018392:IPR000064; KEGG: chy:CHY_0674 putative cell-wall associated endopeptidase; PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Q3AEA5 Putative cell-wall associated endopeptidase; PFAM: NlpC/P60 family; LysM domain.


ensembl_gene_id: Slip_1058
symbol: Slip_1058
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0915 response regulator receiver protein; SPTR: Q0AYH3 Response regulator receiver protein.


ensembl_gene_id: Slip_1059
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: Slip_1060
symbol: Slip_1060
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683:IPR006684; KEGG: cbi:CLJ_B1202 thioesterase family protein; PFAM: thioesterase superfamily protein; SPTR: C3KT69 Thioesterase family protein; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051.


ensembl_gene_id: Slip_1061
symbol: Slip_1061
gene_biotype: protein_coding
description:
  MgtC/SapB transporter; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: swo:Swol_0917 cation transport ATPase; PFAM: MgtC/SapB transporter; SPTR: Q0AYH1 Cation transport ATPase; PFAM: MgtC family.


ensembl_gene_id: Slip_1062
symbol: Slip_1062
gene_biotype: protein_coding
description:
  InterPro IPR004995; KEGG: mta:Moth_2042 GerA spore germination protein; PFAM: GerA spore germination protein; SPTR: Q2RGV1 GerA spore germination protein; PFAM: Bacillus/Clostridium GerA spore germination protein.


ensembl_gene_id: Slip_1064
symbol: Slip_1064
gene_biotype: protein_coding
description:
  InterPro IPR008844; KEGG: adg:Adeg_0298 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: C9RB34 Germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.


ensembl_gene_id: Slip_1066
symbol: Slip_1066
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1858; Contains selenocysteine; InterPro IPR015077; KEGG: cce:Ccel_1108 domain of unknown function DUF1858; PFAM: Domain of unknown function DUF1858; SPTR: B8HZW7 Putative uncharacterized protein; manually curated; PFAM: Domain of unknown function (DUF1858).


ensembl_gene_id: Slip_1067
symbol: Slip_1067
gene_biotype: protein_coding
description:
  InterPro IPR018126; KEGG: swo:Swol_0918 hypothetical protein; SPTR: Q0AYH0 Putative uncharacterized protein; PFAM: Small, acid-soluble spore proteins, alpha/beta type.


ensembl_gene_id: Slip_1068
symbol: Slip_1068
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR013785; KEGG: swo:Swol_0919 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AYG9 Oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_1069
symbol: Slip_1069
gene_biotype: protein_coding
description:
  degV family protein; COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: dhd:Dhaf_2746 DegV family protein; PFAM: DegV family protein; SPTR: B8FWG0 DegV family protein; TIGRFAM: degV family protein; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family.


ensembl_gene_id: Slip_1070
symbol: Slip_1070
gene_biotype: protein_coding
description:
  COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: swo:Swol_0920 hypothetical protein; PFAM: Putitive phosphate transport regulator; SPTR: Q0AYG8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153.


ensembl_gene_id: Slip_1071
symbol: miaB
gene_biotype: protein_coding
description:
  RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: Slip_1072
symbol: Slip_1072
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_0973 hypothetical protein; SPTR: Q0AYB6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.


ensembl_gene_id: Slip_1073
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Slip_1074
symbol: Slip_1074
gene_biotype: protein_coding
description:
  Hydantoinase/oxoprolinase; COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: swo:Swol_0975 hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; SPTR: Q0AYB4 Hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region.


ensembl_gene_id: Slip_1075
symbol: Slip_1075
gene_biotype: protein_coding
description:
  COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: mtp:Mthe_1405 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily; SPTR: A0B906 Histone deacetylase superfamily; PFAM: Histone deacetylase domain.


ensembl_gene_id: Slip_1076
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Slip_1077
symbol: Slip_1077
gene_biotype: protein_coding
description:
  Protein of unknown function DUF548; InterPro IPR007536; KEGG: swo:Swol_0978 hypothetical protein; PFAM: protein of unknown function DUF548; SPTR: Q0AYB1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF548).


ensembl_gene_id: Slip_1078
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Slip_1079
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: Slip_1080
symbol: Slip_1080
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR000627:IPR003593:IPR003959:IPR000641; KEGG: swo:Swol_0983 hypothetical protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: Q0AYA7 SpoVK; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K.


ensembl_gene_id: Slip_1081
symbol: Slip_1081
gene_biotype: protein_coding
description:
  COGs: COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance; InterPro IPR009651:IPR015424:IPR015421; KEGG: swo:Swol_1005 putative aluminum resistance protein; PFAM: Aluminium resistance family protein; SPTR: Q0AY85 Putative aluminum resistance protein; PFAM: Aluminium resistance protein.


ensembl_gene_id: Slip_1082
symbol: Slip_1082
gene_biotype: protein_coding
description:
  Protein of unknown function DUF456; COGs: COG2839 conserved hypothetical protein; InterPro IPR007403; KEGG: swo:Swol_1006 hypothetical protein; PFAM: protein of unknown function DUF456; SPTR: Q0AY84 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF456).


ensembl_gene_id: Slip_1083
symbol: Slip_1083
gene_biotype: protein_coding
description:
  COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR004809:IPR014746; KEGG: pth:PTH_0733 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: C0GKN5 Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.


ensembl_gene_id: Slip_1084
symbol: lexA
gene_biotype: protein_coding
description:
  Transcriptional repressor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: Slip_1085
symbol: Slip_1085
gene_biotype: protein_coding
description:
  PP-loop domain protein; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR011063:IPR012089:IPR014729; KEGG: swo:Swol_1011 PP family ATPase; PFAM: PP-loop domain protein; SPTR: Q0AY79 ATPase of the pp-loop superfamily; PFAM: PP-loop family; Belongs to the TtcA family.


ensembl_gene_id: Slip_1086
symbol: Slip_1086
gene_biotype: protein_coding
description:
  Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR017900:IPR001450:IPR004017:IPR012257:IPR 009051:IPR012285:IPR017896; KEGG: swo:Swol_1012 glycolate oxidase iron-sulfur subunit, putative; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0AY78 Glycolate oxidase iron-sulfur subunit, putative; PFAM: Cysteine-rich domain.


ensembl_gene_id: Slip_1087
symbol: Slip_1087
gene_biotype: protein_coding
description:
  FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR006094:IPR004113:IPR016166:IPR016164:IPR 016167:IPR016168; KEGG: swo:Swol_1013 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; SPTR: Q0AY77 D-lactate dehydrogenase (Cytochrome); PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.


ensembl_gene_id: Slip_1088
symbol: Slip_1088
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2088; COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: sth:STH1673 hypothetical protein; PFAM: Protein of unknown function DUF2088; SPTR: Q67NT5 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088).


ensembl_gene_id: Slip_1090
symbol: Slip_1090
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901:IPR009036:IPR016040; KEGG: adg:Adeg_1008 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: C9RD14 UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; ThiF family.


ensembl_gene_id: Slip_1091
symbol: Slip_1091
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG3863 Uncharacterized distant relative of cell wall-associated hydrolase; KEGG: swo:Swol_0390 hypothetical protein; SPTR: Q0AZX6 Putative uncharacterized protein; PFAM: Orthopoxvirus protein of unknown function (DUF830).


ensembl_gene_id: Slip_1093
symbol: Slip_1093
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR006158:IPR007197:IPR013785; KEGG: swo:Swol_1016 magnesium-protoporphyrin IX monomethyl ester oxidative cyclase; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0AY74 Magnesium-protoporphyrin IX monomethyl ester oxidative cyclase; PFAM: Radical SAM superfamily; B12 binding domain.


ensembl_gene_id: Slip_1094
symbol: Slip_1094
gene_biotype: protein_coding
description:
  CBS domain containing protein; COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR000644:IPR001667:IPR004097; KEGG: swo:Swol_0602 putative manganese-dependent inorganic pyrophosphatase; PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; DHHA2 domain protein; SMART: CBS domain containing protein; SPTR: Q0AZC3 Inorganic diphosphatase; PFAM: DHH family; CBS domain; DHHA2 domain.


ensembl_gene_id: Slip_1095
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: Slip_1096
symbol: Slip_1096
gene_biotype: protein_coding
description:
  CDP-diacylglycerol/serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: chy:CHY_0922 CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: Q3ADL5 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Slip_1098
symbol: Slip_1098
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR002052; KEGG: dau:Daud_1260 hypothetical protein; SPTR: B1I407 Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201).


ensembl_gene_id: Slip_1099
symbol: Slip_1099
gene_biotype: protein_coding
description:
  AAA ATPase; InterPro IPR003593; KEGG: dau:Daud_1259 AAA ATPase; SMART: AAA ATPase; SPTR: B1I406 AAA ATPase; PFAM: ATPase family associated with various cellular activities (AAA).


ensembl_gene_id: Slip_1100
symbol: Slip_1100
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264:IPR001460:IPR011816:IPR012338; KEGG: drm:Dred_1803 1A family penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: A4J5H5 Penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.


ensembl_gene_id: Slip_1102
symbol: Slip_1102
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2225; COGs: COG1655 conserved hypothetical protein; InterPro IPR018708; KEGG: ctc:CTC00335 hypothetical protein; PFAM: Protein of unknown function DUF2225; SPTR: C6Q1Q4 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2225).


ensembl_gene_id: Slip_1104
symbol: Slip_1104
gene_biotype: protein_coding
description:
  Protein of unknown function DUF362; COGs: COG2006 conserved hypothetical protein; InterPro IPR007160; KEGG: nth:Nther_0571 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: protein of unknown function DUF362; SPTR: D1JBW0 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362).


ensembl_gene_id: Slip_1105
symbol: Slip_1105
gene_biotype: protein_coding
description:
  COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: swo:Swol_1292 Zn-dependent hydrolases including glyoxylases-like protein; SPTR: Q0AXF4 Zn-dependent hydrolases including glyoxylases-like protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_1106
symbol: Slip_1106
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger; COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component; InterPro IPR006153:IPR003148:IPR006037:IPR016040; KEGG: swo:Swol_1178 putative potassium efflux transporter; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: Q0AXR7 Putative potassium efflux transporter; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Slip_1107
symbol: Slip_1107
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: aae:aq_429 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: O66743 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Slip_1108
symbol: Slip_1108
gene_biotype: protein_coding
description:
  Protein of unknown function DUF503; COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: swo:Swol_1177 hypothetical protein; PFAM: protein of unknown function DUF503; SPTR: Q0AXR8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF503).


ensembl_gene_id: Slip_1109
symbol: Slip_1109
gene_biotype: protein_coding
description:
  Protein of unknown function DUF35; COGs: COG1545 nucleic-acid-binding protein containing a Zn-ribbon; InterPro IPR002878; KEGG: dal:Dalk_3386 protein of unknown function DUF35; PFAM: protein of unknown function DUF35; SPTR: B8FLC9 Putative uncharacterized protein; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain.


ensembl_gene_id: Slip_1110
symbol: Slip_1110
gene_biotype: protein_coding
description:
  Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: drm:Dred_1765 creatinase; PFAM: peptidase M24; creatinase; SPTR: A4J5D7 Creatinase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.


ensembl_gene_id: Slip_1111
symbol: Slip_1111
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039; KEGG: rha:RHA1_ro08876 acetyl-CoA acetyltransferase; SPTR: Q0RXR6 Probable acetyl-CoA C-acetyltransferase.


ensembl_gene_id: Slip_1112
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Slip_1113
symbol: Slip_1113
gene_biotype: protein_coding
description:
  KEGG: swo:Swol_1172 hypothetical protein; SPTR: Q0AXS3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2679).


ensembl_gene_id: Slip_1114
symbol: pfkA
gene_biotype: protein_coding
description:
  Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: Slip_1115
symbol: Slip_1115
gene_biotype: protein_coding
description:
  KEGG: dau:Daud_0760 hypothetical protein; SPTR: B1I2R8 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Slip_1116
symbol: Slip_1116
gene_biotype: protein_coding
description:
  HtrA2 peptidase; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254:IPR001940:IPR009003; KEGG: swo:Swol_1169 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Q0AXS6 Peptidase S1 and S6, chymotrypsin/Hap; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family.


ensembl_gene_id: Slip_1117
symbol: Slip_1117
gene_biotype: protein_coding
description:
  Von Willebrand factor type A; COGs: COG1240 Mg-chelatase subunit ChlD; InterPro IPR002035; KEGG: swo:Swol_0446 Mg-chelatase subunit ChlD-like protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Q0AZS1 Mg-chelatase subunit ChlD-like protein; PFAM: von Willebrand factor type A domain.


ensembl_gene_id: Slip_1118
symbol: Slip_1118
gene_biotype: protein_coding
description:
  COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR003593; KEGG: swo:Swol_0445 magnesium chelatase; PRIAM: Magnesium chelatase; SMART: AAA ATPase; SPTR: Q0AZS2 Magnesium chelatase; PFAM: MCM2/3/5 family.


ensembl_gene_id: Slip_1119
symbol: Slip_1119
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; COGs: COG2202 FOG: PAS/PAC domain; InterProIPR000014:IPR001610:IPR013656:IPR013767:IPR 000700; KEGG: swo:Swol_1938 PAS/PAC domain-containing protein; PFAM: PAS fold domain protein; PAS fold-4 domain protein; SPTR: Q0AVL9 PAS/PAC domain-like protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Slip_1121
symbol: Slip_1121
gene_biotype: protein_coding
description:
  Protein of unknown function DUF523; COGs: COG1683 conserved hypothetical protein; InterPro IPR007553; KEGG: sth:STH1078 hypothetical protein; PFAM: protein of unknown function DUF523; SPTR: Q67QI0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF523).


ensembl_gene_id: Slip_1122
symbol: Slip_1122
gene_biotype: protein_coding
description:
  Queuosine synthesis; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR018317:IPR008532; KEGG: swo:Swol_1163 hypothetical protein; PFAM: Queuosine synthesis-like; protein of unknown function DUF814; SPTR: Q0AXT2 Putative uncharacterized protein; manually curated; PFAM: Domain of unknown function (DUF814); Thiamine biosynthesis protein (ThiI).


ensembl_gene_id: Slip_1123
symbol: Slip_1123
gene_biotype: protein_coding
description:
  degV family protein; COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: ckr:CKR_2224 hypothetical protein; PFAM: DegV family protein; SPTR: B0MNZ4 Putative uncharacterized protein; TIGRFAM: degV family protein; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family.


ensembl_gene_id: Slip_1124
symbol: Slip_1124
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197; KEGG: pth:PTH_2598 DNA repair photolyase; PFAM: Radical SAM domain protein; SPTR: A5CYZ6 DNA repair photolyase; PFAM: Radical SAM superfamily.


ensembl_gene_id: Slip_1125
symbol: Slip_1125
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: Slip_1126
symbol: Slip_1126
gene_biotype: protein_coding
description:
  Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: mba:Mbar_A2665 type I restriction-modification system specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: Q468X1 Type I restriction-modification system specificity subunit; PFAM: Type I restriction modification DNA specificity domain.


ensembl_gene_id: Slip_1127
symbol: Slip_1127
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR002296; KEGG: dol:Dole_2236 N-6 DNA methylase; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: A1HQI1 N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.


ensembl_gene_id: Slip_1128
symbol: Slip_1128
gene_biotype: protein_coding
description:
  Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: pth:PTH_0693 site-specific recombinases; PFAM: Resolvase domain; Recombinase; SPTR: C6Q3S3 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.


ensembl_gene_id: Slip_1129
symbol: Slip_1129
gene_biotype: protein_coding
description:
  Peptidoglycan-binding lysin domain protein; InterPro IPR002482:IPR018392; KEGG: glo:Glov_0582 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: C6Q3R9 Putative uncharacterized protein; PFAM: LysM domain.


ensembl_gene_id: Slip_1130
symbol: Slip_1130
gene_biotype: protein_coding
description:
  COGs: COG3663 G:T/U mismatch-specific DNA glycosylase; InterPro IPR005122; KEGG: fjo:Fjoh_4322 G:T/U mismatch-specific DNA glycosylase-like protein; SPTR: A5FBU1 G:T/U mismatch-specific DNA glycosylase-like protein; PFAM: Uracil DNA glycosylase superfamily.


ensembl_gene_id: Slip_1131
symbol: Slip_1131
gene_biotype: protein_coding
description:
  COGs: COG0782 Transcription elongation factor; InterPro IPR003006:IPR018151:IPR001437; KEGG: pth:PTH_0541 hypothetical protein; PFAM: transcription elongation factor GreA/GreB domain protein; SPTR: A5D4X0 Putative uncharacterized protein; PFAM: Transcription elongation factor, GreA/GreB, C-term.


ensembl_gene_id: Slip_1134
symbol: Slip_1134
gene_biotype: protein_coding
description:
  KEGG: sti:Sthe_2247 transcriptional regulator, LuxR family; SPTR: C6Q3R6 Putative uncharacterized protein.


ensembl_gene_id: Slip_1135
symbol: Slip_1135
gene_biotype: protein_coding
description:
  Regulatory protein DeoR; InterPro IPR018356:IPR001034; KEGG: chy:CHY_0837 DNA repair protein RadA; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C7HHG0 Helix-turn-helix type 11 domain protein; PFAM: HTH domain.


ensembl_gene_id: Slip_1138
symbol: Slip_1138
gene_biotype: protein_coding
description:
  KEGG: Os12g0446500; hypothetical protein; SPTR: Q2QRX9 Metallopeptidase family M24 containing protein, expressed.


ensembl_gene_id: Slip_1139
symbol: Slip_1139
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with GAF sensor; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR003018:IPR000160:IPR001633; KEGG: ava:Ava_4425 diguanylate cyclase/phosphodiesterase with FHA and GAF sensor; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SPTR: Q3M4R3 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate [...]


ensembl_gene_id: Slip_1146
symbol: Slip_1146
gene_biotype: protein_coding
description:
  Copper amine oxidase domain protein; COGs: COG3858 glycosyl hydrolase; InterProIPR011583:IPR012854:IPR001223:IPR017853:IPR 013781; KEGG: dae:Dtox_1598 copper amine oxidase domain protein; PFAM: copper amine oxidase domain protein; glycoside hydrolase family 18; SMART: chitinase II; SPTR: C7HHF7 Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18.


ensembl_gene_id: Slip_1147
symbol: Slip_1147
gene_biotype: protein_coding
description:
  InterPro IPR012854; KEGG: tpd:Teth39_1861 copper amine oxidase domain-containing protein; PFAM: copper amine oxidase domain protein; SPTR: B0KCN8 Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_1150
symbol: Slip_1150
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1670; InterPro IPR012872; KEGG: dau:Daud_0686 hypothetical protein; PFAM: Protein of unknown function DUF1670; SPTR: B1I2I7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1670).


ensembl_gene_id: Slip_1153
symbol: Slip_1153
gene_biotype: protein_coding
description:
  Copper amine oxidase domain protein; InterPro IPR012854; KEGG: tte:TTE0424 hypothetical protein; PFAM: copper amine oxidase domain protein; SPTR: C6Q4M5 Putative uncharacterized protein; PFAM: Copper amine oxidase N-terminal domain.


ensembl_gene_id: Slip_1155
symbol: Slip_1155
gene_biotype: protein_coding
description:
  Addiction module toxin, RelE/StbE family; InterPro IPR000834:IPR007712:IPR012753; KEGG: hor:Hore_13720 addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; SPTR: C6PA36 Plasmid stabilization system protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.


ensembl_gene_id: Slip_1157
symbol: Slip_1157
gene_biotype: protein_coding
description:
  Addiction module antitoxin, RelB/DinJ family; COGs: COG3077 DNA-damage-inducible protein J; InterPro IPR007337; KEGG: hmo:HM1_2851 hypothetical protein; PFAM: RelB antitoxin; SPTR: B0TCH2 Putative uncharacterized protein; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.


ensembl_gene_id: Slip_1158
symbol: Slip_1158
gene_biotype: protein_coding
description:
  Addiction module toxin, RelE/StbE family; InterPro IPR007712:IPR012753; KEGG: swo:Swol_0151 hypothetical protein; PFAM: plasmid stabilization system; SPTR: Q0B0J9 Putative uncharacterized protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.


ensembl_gene_id: Slip_1159
symbol: Slip_1159
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmA family; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterProIPR010280:IPR002792:IPR007848:IPR001566:IPR 016027; KEGG: sth:STH2818 RNA methyltransferase; PFAM: deoxyribonuclease/rho motif-related TRAM; methyltransferase small; SPTR: Q67KJ5 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: Slip_1160
symbol: Slip_1160
gene_biotype: protein_coding
description:
  Beta-lactamase domain-containing protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dol:Dole_0336 beta-lactamase domain-containing protein; SPTR: C0GF39 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_1161
symbol: Slip_1161
gene_biotype: protein_coding
description:
  Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087:IPR013830:IPR013831; KEGG: swo:Swol_1162 lipolytic enzyme, G-D-S-L; PFAM: lipolytic protein G-D-S-L family; SPTR: Q0AXT3 Lipolytic enzyme, G-D-S-L; PFAM: GDSL-like Lipase/Acylhydrolase.


ensembl_gene_id: Slip_1162
symbol: Slip_1162
gene_biotype: protein_coding
description:
  COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: swo:Swol_1061 Zn-dependent hydrolases including glyoxylases-like protein; SPTR: C0GF39 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Slip_1163
symbol: Slip_1163
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0182; COGs: COG1615 conserved hypothetical protein; InterPro IPR005372; KEGG: swo:Swol_1161 hypothetical protein; PFAM: protein of unknown function UPF0182; SPTR: Q0AXT4 UPF0182 protein Swol_1161; PFAM: Uncharacterised protein family (UPF0182).


