# geneInfo

ensembl_gene_id: Deba_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Deba_0002
symbol: Deba_0002
gene_biotype: protein_coding
description:
  COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179:IPR008104; KEGG: pca:Pcar_0774 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; SPTR: Q3A6H4 Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase.


ensembl_gene_id: Deba_0003
symbol: Deba_0003
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_3725 acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FLQ8 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0004
symbol: Deba_0004
gene_biotype: protein_coding
description:
  Regulatory protein, FmdB family; InterPro IPR013429; KEGG: sfu:Sfum_3203 hypothetical protein; PFAM: Putative regulatory protein FmdB; SPTR: A0LN74 Putative uncharacterized protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.


ensembl_gene_id: Deba_0005
symbol: Deba_0005
gene_biotype: protein_coding
description:
  COGs: COG2927 DNA polymerase III chi subunit; InterPro IPR007459; KEGG: pca:Pcar_1548 DNA polymerase III, chi subunit; PFAM: DNA polymerase III chi subunit HolC; SPTR: Q3A4B4 DNA polymerase III, chi subunit; PFAM: DNA polymerase III chi subunit, HolC.


ensembl_gene_id: Deba_0006
symbol: Deba_0006
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003661:IPR003594:IPR005467:IPR 009082:IPR004358; KEGG: dal:Dalk_2165 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: B8FF41 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_0007
symbol: Deba_0007
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dal:Dalk_2166 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FF42 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0008
symbol: Deba_0008
gene_biotype: protein_coding
description:
  Response regulator receiver protein; COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR001789:IPR000292:IPR011006; KEGG: dal:Dalk_2167 response regulator receiver protein; PFAM: formate/nitrite transporter; response regulator receiver; SMART: response regulator receiver; SPTR: B8FF43 Response regulator receiver protein; PFAM: Formate/nitrite transporter; Response regulator receiver domain; TIGRFAM: formate/nitrite transporter.


ensembl_gene_id: Deba_0009
symbol: Deba_0009
gene_biotype: protein_coding
description:
  COGs: COG0506 Proline dehydrogenase; InterPro IPR002872; KEGG: bba:Bd1251 1-pyrroline-5 carboxylate dehydrogenase; PFAM: Proline dehydrogenase; SPTR: B4VMU2 Delta-1-pyrroline-5-carboxylate dehydrogenase, putative; PFAM: Proline dehydrogenase.


ensembl_gene_id: Deba_0010
symbol: Deba_0010
gene_biotype: protein_coding
description:
  KEGG: dol:Dole_3245 hypothetical protein; SPTR: A9A0C9 Putative uncharacterized protein; PFAM: YeeE/YedE family (DUF395).


ensembl_gene_id: Deba_0011
symbol: Deba_0011
gene_biotype: protein_coding
description:
  SirA family protein; InterPro IPR001455; KEGG: tye:THEYE_A1506 hypothetical protein; PFAM: SirA family protein; SPTR: B5YGA5 Putative uncharacterized protein; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Deba_0012
symbol: Deba_0012
gene_biotype: protein_coding
description:
  KEGG: dol:Dole_3247 hypothetical protein; SPTR: A9A0D1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3343).


ensembl_gene_id: Deba_0013
symbol: Deba_0013
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0031; InterPro IPR000631; KEGG: dat:HRM2_44810 hypothetical protein; PFAM: protein of unknown function UPF0031; SPTR: C0QF36 Putative uncharacterized protein; PFAM: Carbohydrate kinase.


ensembl_gene_id: Deba_0015
symbol: Deba_0015
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873:IPR020845; KEGG: ade:Adeh_2886 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Q2IDJ9 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0016
symbol: Deba_0016
gene_biotype: protein_coding
description:
  COGs: COG2406 Protein distantly related to ferritins; InterProIPR008331:IPR009040:IPR009078:IPR012347:IPR 014490; KEGG: mhu:Mhun_0131 ferritin and Dps; PFAM: Ferritin Dps family protein; SPTR: Q2FMS4 Ferritin and Dps; PFAM: Ferritin-like domain.


ensembl_gene_id: Deba_0017
symbol: Deba_0017
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR016196; KEGG: dol:Dole_3001 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ZZ31 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Deba_0019
symbol: Deba_0019
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013767:IPR003018:IPR003661:IPR003594:IPR 001789:IPR005467:IPR000014:IPR011006:IPR009082:IPR019825:I PR004358; KEGG: dal:Dalk_2518 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; response regulator recei [...]


ensembl_gene_id: Deba_0020
symbol: Deba_0020
gene_biotype: protein_coding
description:
  RND efflux system, outer membrane lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: dat:HRM2_48490 outer membrane protein; PFAM: outer membrane efflux protein; SPTR: C0QIF3 Outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.


ensembl_gene_id: Deba_0021
symbol: Deba_0021
gene_biotype: protein_coding
description:
  Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR000731:IPR004764; KEGG: dde:Dde_0401 hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; SPTR: Q316E4 Hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.


ensembl_gene_id: Deba_0022
symbol: Deba_0022
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dde:Dde_0402 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q316E3 Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Deba_0023
symbol: Deba_0023
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger; COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component; InterPro IPR006153:IPR003148:IPR006037:IPR016040; KEGG: dvm:DvMF_1119 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: B8DKB1 Sodium/hydrogen exchanger; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; TIGRFAM: potassium efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Deba_0024
symbol: Deba_0024
gene_biotype: protein_coding
description:
  UDP-sulfoquinovose synthase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: noc:Noc_1509 UDP-sulfoquinovose synthase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-sulfoquinovose synthase; SPTR: Q3JB02 UDP-sulfoquinovose synthase; PFAM: NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Deba_0025
symbol: Deba_0025
gene_biotype: protein_coding
description:
  Proline-specific peptidase; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR005945:IPR002410; KEGG: mpl:Mpal_1914 proline-specific peptidase; PFAM: alpha/beta hydrolase fold; SPTR: B8GKS2 Proline-specific peptidase; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; TIGRFAM: proline-specific peptidases, Bacillus coagulans-type subfamily; Belongs to the peptidase S33 family.


ensembl_gene_id: Deba_0027
symbol: Deba_0027
gene_biotype: protein_coding
description:
  COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638:IPR004393:IPR013785; KEGG: bpt:Bpet0626 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: A9I465 Nicotinate-mononucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.


ensembl_gene_id: Deba_0028
symbol: Deba_0028
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Deba_0029
symbol: Deba_0029
gene_biotype: protein_coding
description:
  3H domain protein; COGs: COG1827 small molecule binding protein (contains 3H domain); InterPro IPR013196:IPR004173:IPR011991; KEGG: dae:Dtox_2254 helix-turn-helix type 11 domain protein; PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; SPTR: C8VZU0 Helix-turn-helix type 11 domain protein; PFAM: HTH domain; 3H domain.


ensembl_gene_id: Deba_0030
symbol: Deba_0030
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR013656:IPR003661:IPR003594:IPR005467:IPR 000014:IPR009082:IPR004358; KEGG: cag:Cagg_2683 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: B8G4S5 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS  [...]


ensembl_gene_id: Deba_0031
symbol: Deba_0031
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR009100:IPR 009075:IPR006089:IPR013786:IPR013764; KEGG: mxa:MXAN_3048 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; PRIAM: Isovaleryl-CoA dehydrogenase; SPTR: A1ZFB4 Acyl-CoA dehydrogenase, long-chain specific; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_0032
symbol: Deba_0032
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterProIPR001753:IPR006176:IPR008927:IPR016040:IPR 013328; KEGG: hoh:Hoch_3456 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; SPTR: D0LW26 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_0033
symbol: Deba_0033
gene_biotype: protein_coding
description:
  Regulatory protein GntR HTH; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: mta:Moth_2304 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: Q2RG48 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.


ensembl_gene_id: Deba_0034
symbol: Deba_0034
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003661:IPR003594:IPR005467:IPR 009082:IPR004358; KEGG: dma:DMR_10790 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C4XL31 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_0035
symbol: Deba_0035
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR002197:IPR011006:IPR 009057:IPR003593:IPR020441; KEGG: tye:THEYE_A0743 response regulator HsfA; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: B9ZPP2 Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domai [...]


ensembl_gene_id: Deba_0036
symbol: Deba_0036
gene_biotype: protein_coding
description:
  Sulphate transporter; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645; KEGG: dde:Dde_3641 sulfate permease; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Q30V62 Sulfate permease; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1.


ensembl_gene_id: Deba_0037
symbol: Deba_0037
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dat:HRM2_40350 response regulator receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C0QC76 Response regulator receiver domain protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0038
symbol: Deba_0038
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003661:IPR003594:IPR005467:IPR009082:IPR 004358; KEGG: dal:Dalk_2933 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: B8FKY8 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_0039
symbol: Deba_0039
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: sfu:Sfum_0656 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A0LG03 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0040
symbol: Deba_0040
gene_biotype: protein_coding
description:
  KEGG: dol:Dole_2332 histidine kinase A domain-containing protein; SPTR: A8ZV46 Histidine kinase A domain protein.


ensembl_gene_id: Deba_0041
symbol: Deba_0041
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dal:Dalk_2936 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FKZ1 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0042
symbol: Deba_0042
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: similar to CG6619 CG6619-PA; SPTR: C1MP00 Endonuclease/exonuclease/phosphatase.


ensembl_gene_id: Deba_0043
symbol: Deba_0043
gene_biotype: protein_coding
description:
  COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789:IPR011006; KEGG: dma:DMR_37700 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C4XMD6 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0044
symbol: Deba_0044
gene_biotype: protein_coding
description:
  COGs: COG1639 signal transduction protein; InterPro IPR001789:IPR013976:IPR011006:IPR014626; KEGG: dma:DMR_37710 response regulator receiver protein; PFAM: Metal-dependent hydrolase HDOD; response regulator receiver; SMART: response regulator receiver; SPTR: C4XMD7 Response regulator receiver protein; PFAM: Response regulator receiver domain; HDOD domain.


ensembl_gene_id: Deba_0045
symbol: Deba_0045
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013656:IPR013767:IPR003594:IPR005467:IPR 000014:IPR000700:IPR001610:IPR004358; KEGG: dma:DMR_38800 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C4XN68 Sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosp [...]


ensembl_gene_id: Deba_0046
symbol: Deba_0046
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; COGs: COG2202 FOG: PAS/PAC domain; InterProIPR001789:IPR013656:IPR013767:IPR000014:IPR 000700:IPR011006; KEGG: mac:MA1267 sensory transduction histidine kinase; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: response regulator receiver; PAS domain containing protein; SPTR: B3U4S0 Response regulator receiver; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Deba_0047
symbol: Deba_0047
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG3359 exonuclease; InterPro IPR012337; KEGG: dal:Dalk_5288 hypothetical protein; SPTR: B8FEH6 Putative uncharacterized protein.


ensembl_gene_id: Deba_0049
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: Deba_0050
symbol: Deba_0050
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005268; KEGG: rxy:Rxyl_0512 hypothetical protein; SPTR: Q1AYP2 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1.


ensembl_gene_id: Deba_0052
symbol: Deba_0052
gene_biotype: protein_coding
description:
  Agmatinase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035:IPR020855:IPR005925; KEGG: mgm:Mmc1_3564 putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: C8R0F8 Agmatinase; TIGRFAM: agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family.


ensembl_gene_id: Deba_0053
symbol: Deba_0053
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; InterPro IPR013655:IPR000014:IPR000700:IPR001610; KEGG: dal:Dalk_0127 putative PAS/PAC sensor protein; PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein; SPTR: B8FKM2 Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Deba_0054
symbol: Deba_0054
gene_biotype: protein_coding
description:
  DGC domain protein; COGs: COG4273 conserved hypothetical protein; InterPro IPR014958; KEGG: sfu:Sfum_3599 hypothetical protein; PFAM: DGC domain protein; SPTR: A0LPB7 Putative uncharacterized protein; manually curated; PFAM: DGC domain.


ensembl_gene_id: Deba_0055
symbol: Deba_0055
gene_biotype: protein_coding
description:
  UspA domain protein; InterPro IPR006016:IPR006015:IPR014729; KEGG: dol:Dole_1330 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A8ZYM9 UspA domain protein; PFAM: Universal stress protein family.


ensembl_gene_id: Deba_0056
symbol: Deba_0056
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dol:Dole_1361 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ZYR0 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0057
symbol: Deba_0057
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR001789:IPR003661:IPR003594:IPR005467:IPR 011006:IPR009082:IPR004358; KEGG: dal:Dalk_2254 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SPTR: B8FIF7 Sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyr [...]


ensembl_gene_id: Deba_0058
symbol: Deba_0058
gene_biotype: protein_coding
description:
  Anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: dol:Dole_1359 anion transporter; PFAM: sodium/sulphate symporter; SPTR: A8ZYQ8 Anion transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter.


ensembl_gene_id: Deba_0059
symbol: Deba_0059
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dal:Dalk_2251 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FIF4 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0060
symbol: Deba_0060
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dal:Dalk_2250 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FIF3 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0061
symbol: Deba_0061
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003661:IPR003594:IPR005467:IPR009082:IPR 004358; KEGG: dal:Dalk_2249 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: B8FIF2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_0062
symbol: Deba_0062
gene_biotype: protein_coding
description:
  Response regulator receiver protein; InterPro IPR011006; KEGG: gau:GAU_2230 NarL family two-component response regulator; SPTR: C1A9U5 NarL family two-component response regulator.


ensembl_gene_id: Deba_0063
symbol: Deba_0063
gene_biotype: protein_coding
description:
  COGs: COG4564 Signal transduction histidine kinase; InterProIPR013656:IPR011712:IPR003594:IPR005467:IPR 000014:IPR000700; KEGG: reh:H16_A0780 signal transduction histidine kinase; PFAM: PAS fold-4 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein; SPTR: Q0KDJ4 Signal transduction histidine kinase containing PAS/PAC sensor domain; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS f [...]


ensembl_gene_id: Deba_0064
symbol: Deba_0064
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR001789:IPR000792:IPR011006:IPR016032:IPR 011991; KEGG: gsu:GSU3229 LuxR family DNA-binding response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Q747N6 DNA-binding response regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.


ensembl_gene_id: Deba_0065
symbol: Deba_0065
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gvi:gvip286 carbon dioxide concentrating mechanism protein; SPTR: Q7NIT9 Carbon dioxide concentrating mechanism protein.


ensembl_gene_id: Deba_0066
symbol: Deba_0066
gene_biotype: protein_coding
description:
  COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR003018:IPR003594:IPR005467:IPR009082:IPR 004358; KEGG: sfu:Sfum_0281 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; SPTR: Q2YZR5 Sensor protein; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Deba_0067
symbol: Deba_0067
gene_biotype: protein_coding
description:
  Redoxin domain protein; InterPro IPR013740:IPR017936:IPR012336:IPR012335; KEGG: afe:Lferr_0206 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: C6MAN3 Thioredoxin family protein; PFAM: Redoxin.


ensembl_gene_id: Deba_0068
symbol: Deba_0068
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase family protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: chy:CHY_0600 metallo-beta-lactamase family protein; SPTR: Q3AEH8 Metallo-beta-lactamase family protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0069
symbol: Deba_0069
gene_biotype: protein_coding
description:
  InterPro IPR011990; KEGG: sfu:Sfum_0584 hypothetical protein; SPTR: A0LFT1 Putative uncharacterized protein.


ensembl_gene_id: Deba_0070
symbol: Deba_0070
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR017896:IPR017900; KEGG: sfu:Sfum_3217 hypothetical protein; SPTR: A0LN88 Putative uncharacterized protein.


ensembl_gene_id: Deba_0071
symbol: Deba_0071
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1592 Rubrerythrin; InterProIPR003251:IPR004039:IPR009040:IPR009078:IPR 012347; KEGG: dol:Dole_2183 rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: A8ZUF5 Rubrerythrin; PFAM: Rubrerythrin.


ensembl_gene_id: Deba_0072
symbol: Deba_0072
gene_biotype: protein_coding
description:
  Transcriptional modulator of MazE/toxin, MazF; COGs: COG2337 Growth inhibitor; InterPro IPR003477:IPR011067; KEGG: pph:Ppha_0265 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: B0BJH3 Putative integron gene cassette protein; PFAM: PemK-like protein.


ensembl_gene_id: Deba_0073
symbol: Deba_0073
gene_biotype: protein_coding
description:
  Transcriptional regulator/antitoxin, MazE; COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: dra:DR_0416 ppGpp-regulated growth inhibitor suppressor ChpR/MazE, putative; PFAM: SpoVT/AbrB domain protein; SPTR: Q9RX99 PpGpp-regulated growth inhibitor suppressor ChpR/MazE, putative; PFAM: SpoVT / AbrB like domain.


ensembl_gene_id: Deba_0075
symbol: Deba_0075
gene_biotype: protein_coding
description:
  DoxX family protein; InterPro IPR011637; KEGG: dol:Dole_2885 DoxX family protein; PFAM: DoxX family protein; SPTR: A8ZYG3 DoxX family protein; PFAM: Methylamine utilisation protein MauE.


ensembl_gene_id: Deba_0076
symbol: Deba_0076
gene_biotype: protein_coding
description:
  Rhodanese domain protein; InterPro IPR001763; KEGG: dba:Dbac_0382 rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C0GSB7 Rhodanese domain protein; PFAM: Rhodanese-like domain.


ensembl_gene_id: Deba_0077
symbol: Deba_0077
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: sfu:Sfum_1392 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A0LI31 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Deba_0078
symbol: Deba_0078
gene_biotype: protein_coding
description:
  KdsC; COGs: COG1778 Low specificity phosphatase (HAD superfamily); KEGG: dat:HRM2_27830 KdsC; SPTR: C0QJ60 KdsC; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.


ensembl_gene_id: Deba_0080
symbol: queH
gene_biotype: protein_coding
description:
  Protein of unknown function DUF208; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: Deba_0081
symbol: Deba_0081
gene_biotype: protein_coding
description:
  KEGG: dde:Dde_2148 chemotaxis protein CheZ, putative; SPTR: C8QZ51 Putative chemotaxis phosphatase, CheZ; PFAM: Chemotaxis phosphatase, CheZ.


ensembl_gene_id: Deba_0082
symbol: Deba_0082
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: sat:SYN_00971 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q2LSK6 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0083
symbol: Deba_0083
gene_biotype: protein_coding
description:
  Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR013766:IPR017936:IPR012336:IPR017937:IPR 005746:IPR006662:IPR012335; KEGG: tmz:Tmz1t_0651 thioredoxin; PFAM: Thioredoxin domain; SPTR: C4ZN11 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin.


ensembl_gene_id: Deba_0084
symbol: Deba_0084
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702:IPR000182:IPR016181; KEGG: dat:HRM2_05020 putative 4-hydroxybutyrate CoA-transferase; PFAM: GCN5-related N-acetyltransferase; acetyl-CoA hydrolase/transferase; SPTR: C0QHQ8 Putative 4-hydroxybutyrate CoA-transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_0085
symbol: Deba_0085
gene_biotype: protein_coding
description:
  KEGG: fal:FRAAL0050 putative protein serine/threonine kinase; SPTR: Q0RUK6 Putative uncharacterized protein.


ensembl_gene_id: Deba_0086
symbol: Deba_0086
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR001753:IPR006176:IPR006108:IPR016040:IPR 008927:IPR018376:IPR013328; KEGG: 3-hydroxyacyl-CoA dehyrogenase, putative; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: B9RKN5 3-hydroxyacyl-CoA dehyrogenase, putative; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_0087
symbol: Deba_0087
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterProIPR001647:IPR011075:IPR009057:IPR012287:IPR 015893; KEGG: dal:Dalk_2545 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B8FFH8 Transcriptional regulator, TetR family; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_0088
symbol: Deba_0088
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: afu:AF1028 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: O29234 3-ketoacyl-CoA thiolase (FadA-1); TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Deba_0089
symbol: Deba_0089
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR013163:IPR013767:IPR003661:IPR003594:IPR 001789:IPR005467:IPR000014:IPR000700:IPR011006:IPR009082:I PR001610:IPR004358; KEGG: dol:Dole_3265 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; SPTR: A9 [...]


ensembl_gene_id: Deba_0090
symbol: hisI
gene_biotype: protein_coding
description:
  Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: Deba_0091
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: Deba_0092
symbol: Deba_0092
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterProIPR004839:IPR015424:IPR004838:IPR001176:IPR 015421; KEGG: dol:Dole_1584 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8ZZY8 Aminotransferase class I and II; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Deba_0093
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Deba_0094
symbol: Deba_0094
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG4802 Ferredoxin-thioredoxin reductase catalytic subunit; InterPro IPR004209; KEGG: dol:Dole_2967 hypothetical protein; SPTR: A8ZYZ7 Putative uncharacterized protein; PFAM: Ferredoxin thioredoxin reductase catalytic beta chain.


ensembl_gene_id: Deba_0095
symbol: Deba_0095
gene_biotype: protein_coding
description:
  Glutaredoxin; COGs: COG0695 Glutaredoxin and related protein; InterPro IPR002109:IPR012336:IPR012335; KEGG: dol:Dole_2968 glutaredoxin; PFAM: glutaredoxin; SPTR: A8ZYZ8 Glutaredoxin; PFAM: Glutaredoxin.


ensembl_gene_id: Deba_0096
symbol: Deba_0096
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060:IPR009057:IPR018062; KEGG: gvi:glr0326 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Q7NNT4 AraC family transcriptional regulatory protein.


ensembl_gene_id: Deba_0097
symbol: Deba_0097
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; InterPro IPR011701:IPR016196; KEGG: mxa:MXAN_5357 RhtX/FptX family siderophore transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Q1D1G6 Siderophore transporter, RhtX/FptX family; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Deba_0098
symbol: Deba_0098
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dal:Dalk_5103 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: D1JG71 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_0099
symbol: Deba_0099
gene_biotype: protein_coding
description:
  TonB-dependent siderophore receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531:IPR010105; KEGG: rru:Rru_A0865 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C1SI40 Outer membrane receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor.


ensembl_gene_id: Deba_0100
symbol: Deba_0100
gene_biotype: protein_coding
description:
  Protein of unknown function DUF52; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: pca:Pcar_1651 dioxygenase; PFAM: protein of unknown function DUF52; SPTR: C8QZ40 Putative uncharacterized protein; PFAM: Memo-like protein; Belongs to the MEMO1 family.


ensembl_gene_id: Deba_0101
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: Deba_0102
symbol: Deba_0102
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR019734:IPR011990; KEGG: cts:Ctha_0459 TPR repeat-containing protein; SPTR: C4RCN7 TPR repeat-containing protein.


ensembl_gene_id: Deba_0104
symbol: Deba_0104
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: pna:Pnap_3112 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: B1FBS0 Heparinase II/III family protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_0105
symbol: Deba_0105
gene_biotype: protein_coding
description:
  Integrase catalytic region; InterProIPR001584:IPR012337:IPR009061:IPR009057:IPR 012287; KEGG: dvu:DVU1140 bacteriophage transposase A protein, putative; PFAM: Integrase catalytic region; SPTR: Q72CZ1 Bacteriophage transposase A protein, putative; PFAM: Mu DNA binding, I gamma subdomain; Mu DNA-binding domain; Integrase core domain.


ensembl_gene_id: Deba_0106
symbol: Deba_0106
gene_biotype: protein_coding
description:
  KEGG: dvm:DvMF_0711 hypothetical protein; SPTR: B8DK72 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Deba_0107
symbol: Deba_0107
gene_biotype: protein_coding
description:
  Putative phage repressor; COGs: COG2932 transcriptional regulator protein; InterProIPR001387:IPR019759:IPR015927:IPR010982:IPR 011056; KEGG: csa:Csal_1365 putative phage repressor; PFAM: helix-turn-helix domain protein; Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein; SPTR: Q1QXT8 Putative phage repressor; PFAM: Helix-turn-helix; Peptidase S24-like.


ensembl_gene_id: Deba_0108
symbol: Deba_0108
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104:IPR011010:IPR013762; KEGG: pde:Pden_3122 phage integrase family protein; PFAM: integrase family protein; SPTR: B6BEF5 Phage integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Deba_0109
symbol: Deba_0109
gene_biotype: protein_coding
description:
  DNA binding domain protein, excisionase family; InterPro IPR009061:IPR010093; KEGG: pla:Plav_1818 hypothetical protein; SPTR: A7HU52 Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Deba_0111
symbol: Deba_0111
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: eic:NT01EI_1130 outer membrane usher protein FimD, putative; SPTR: B8A6Z1 Putative uncharacterized protein.


ensembl_gene_id: Deba_0113
symbol: Deba_0113
gene_biotype: protein_coding
description:
  KEGG: ank:AnaeK_1667 protein of unknown function DUF323; SPTR: B4ULN8 Putative uncharacterized protein.


ensembl_gene_id: Deba_0117
symbol: Deba_0117
gene_biotype: protein_coding
description:
  COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576:IPR015824; KEGG: dal:Dalk_0244 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: B8FMT6 Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase.


ensembl_gene_id: Deba_0118
symbol: Deba_0118
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0157; COGs: COG2320 conserved hypothetical protein; InterPro IPR007344; KEGG: geo:Geob_2091 protein of unknown function UPF0157; PFAM: protein of unknown function UPF0157; SPTR: B9M8V0 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0157).


ensembl_gene_id: Deba_0119
symbol: Deba_0119
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR018247; KEGG: esa:ESA_03941 hypothetical protein; SPTR: A7MQ19 Putative uncharacterized protein.


ensembl_gene_id: Deba_0120
symbol: Deba_0120
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: hau:Haur_2614 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A9B0E3 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.


ensembl_gene_id: Deba_0121
symbol: Deba_0121
gene_biotype: protein_coding
description:
  Phosphoglucomutase, alpha-D-glucose phosphate-specific; COGs: COG0033 Phosphoglucomutase; InterProIPR005844:IPR005845:IPR005846:IPR005843:IPR 016055:IPR016066:IPR005852; KEGG: gur:Gura_2654 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: A5G4W1 Phosphoglucomutase, alpha-D-glucose phosphate-specific; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: [...]


ensembl_gene_id: Deba_0122
symbol: Deba_0122
gene_biotype: protein_coding
description:
  Sodium:neurotransmitter symporter; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: drt:Dret_1767 sodium:neurotransmitter symporter; PFAM: sodium:neurotransmitter symporter; SPTR: C8X3Q4 Sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: Deba_0124
symbol: Deba_0124
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; InterPro IPR009875:IPR003006; KEGG: dvl:Dvul_0573 type IV pilus assembly PilZ; PFAM: type IV pilus assembly PilZ; SPTR: Q728C0 Putative uncharacterized protein; PFAM: PilZ domain.


ensembl_gene_id: Deba_0125
symbol: Deba_0125
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tau:Tola_1087 PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: C4LDB7 PpiC-type peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Deba_0126
symbol: Deba_0126
gene_biotype: protein_coding
description:
  InterPro IPR000883; KEGG: pca:Pcar_0850 hypothetical protein; SPTR: Q3A6A1 Putative uncharacterized protein; PFAM: Cytochrome C and Quinol oxidase polypeptide I.


ensembl_gene_id: Deba_0127
symbol: Deba_0127
gene_biotype: protein_coding
description:
  COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: pca:Pcar_0852 TonB-dependent outer membrane receptor for Fe3+/colicin I; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Q3A699 TonB-dependent outer membrane receptor for Fe3+/colicin I; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.


ensembl_gene_id: Deba_0128
symbol: Deba_0128
gene_biotype: protein_coding
description:
  Peptidase S45 penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692:IPR014395; KEGG: dal:Dalk_4289 peptidase S45 penicillin amidase; PFAM: peptidase S45 penicillin amidase; SPTR: B8FMD1 Peptidase S45 penicillin amidase; PFAM: Penicillin amidase.


ensembl_gene_id: Deba_0129
symbol: Deba_0129
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: dal:Dalk_3768 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: B8FLV1 Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_0130
symbol: Deba_0130
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013767:IPR003661:IPR003594:IPR001789:IPR 005467:IPR000014:IPR000700:IPR011006:IPR009082:IPR002226:I PR001610:IPR004358; KEGG: sfu:Sfum_1337 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-contain [...]


ensembl_gene_id: Deba_0131
symbol: Deba_0131
gene_biotype: protein_coding
description:
  COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123:IPR004552; KEGG: scl:sce3018 hypothetical protein; PFAM: phospholipid/glycerol acyltransferase; PRIAM: 1-acylglycerol-3-phosphate O-acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: A9GFN2 Putative uncharacterized protein; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.


ensembl_gene_id: Deba_0132
symbol: Deba_0132
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013767:IPR003661:IPR003594:IPR001789:IPR 005467:IPR000014:IPR000700:IPR011006:IPR009082:IPR004358; KEGG: dal:Dalk_2075 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; SPTR: B8FG89 Sensor protein; TIGRFAM: PAS se [...]


ensembl_gene_id: Deba_0133
symbol: Deba_0133
gene_biotype: protein_coding
description:
  COGs: COG0686 Alanine dehydrogenase; InterProIPR007886:IPR007698:IPR016040:IPR008143:IPR 008141; KEGG: dvu:DVU0571 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; PRIAM: Alanine dehydrogenase; SPTR: Q72EK7 Alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; Belongs to the AlaDH/PNT family.


ensembl_gene_id: Deba_0134
symbol: Deba_0134
gene_biotype: protein_coding
description:
  UspA domain protein; InterPro IPR006016:IPR006015:IPR014729; KEGG: dma:DMR_39250 putative universal stress protein; PFAM: UspA domain protein; SPTR: C4XNB3 Putative universal stress protein; PFAM: Universal stress protein family.


ensembl_gene_id: Deba_0135
symbol: Deba_0135
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR001647:IPR011075:IPR009057:IPR015893; KEGG: nca:Noca_4300 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A1SPR2 Transcriptional regulator; PFAM: YsiA-like protein, C-terminal region.


ensembl_gene_id: Deba_0137
symbol: Deba_0137
gene_biotype: protein_coding
description:
  Tex-like protein; COGs: COG2183 Transcriptional accessory protein; InterProIPR018974:IPR003029:IPR016027:IPR006641:IPR 012340; KEGG: sfu:Sfum_1838 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: A0LJC1 RNA binding S1 domain protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain.


ensembl_gene_id: Deba_0138
symbol: Deba_0138
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dol:Dole_0337 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A8ZSY3 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0139
symbol: Deba_0139
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099:IPR001763:IPR016156; KEGG: hor:Hore_02400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; SPTR: B8D132 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisatio [...]


ensembl_gene_id: Deba_0140
symbol: Deba_0140
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sco:SCO0391 transferase; PFAM: glycosyl transferase group 1; SPTR: Q8KN06 Putative glycosyl transferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0141
symbol: Deba_0141
gene_biotype: protein_coding
description:
  InterPro IPR005358; KEGG: dvm:DvMF_2337 protein of unknown function UPF0153; PFAM: protein of unknown function UPF0153; SPTR: B8DII0 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).


ensembl_gene_id: Deba_0142
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Deba_0143
symbol: Deba_0143
gene_biotype: protein_coding
description:
  Arginine decarboxylase, pyruvoyl-dependent; COGs: COG1945 conserved hypothetical protein; InterPro IPR002724:IPR016104; KEGG: aba:Acid345_1944 pyruvoyl-dependent arginine decarboxylase; PFAM: Pyruvoyl-dependent arginine decarboxylase; PRIAM: Arginine decarboxylase; SPTR: Q1IQA5 Arginine decarboxylase; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent.


ensembl_gene_id: Deba_0144
symbol: Deba_0144
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bpm:BURPS1710b_3218 AraC family transcriptional regulator; SPTR: Q3JPB4 Transcriptional regulator, AraC family.


ensembl_gene_id: Deba_0146
symbol: Deba_0146
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: rmr:Rmar_1316 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: D0MI98 NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Deba_0147
symbol: Deba_0147
gene_biotype: protein_coding
description:
  COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; InterPro IPR001926; KEGG: dal:Dalk_2543 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: 1-aminocyclopropane-1-carboxylate deaminase; SPTR: B8FFH6 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-phosphate dependent enzyme.


ensembl_gene_id: Deba_0148
symbol: Deba_0148
gene_biotype: protein_coding
description:
  COGs: COG3264 Small-conductance mechanosensitive channel; InterProIPR008910:IPR006685:IPR011066:IPR010920:IPR 011014; KEGG: pca:Pcar_2469 putative transport protein; PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; SPTR: Q3A1P9 Putative transport protein; PFAM: Mechanosensitive ion channel; Conserved TM helix.


ensembl_gene_id: Deba_0149
symbol: Deba_0149
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: chy:CHY_0845 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Q3ADT8 Long-chain-fatty-acid--CoA ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0151
symbol: Deba_0151
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: dvl:Dvul_2351 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: Q72EH7 Phenylacetic acid degradation protein PaaI; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_0152
symbol: Deba_0152
gene_biotype: protein_coding
description:
  Bile acid:sodium symporter; InterPro IPR002657; KEGG: sfu:Sfum_1523 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: A0LIF9 Bile acid:sodium symporter.


ensembl_gene_id: Deba_0153
symbol: Deba_0153
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: gme:Gmet_0034 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Q39ZP0 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.


ensembl_gene_id: Deba_0154
symbol: Deba_0154
gene_biotype: protein_coding
description:
  Anti-sigma-factor antagonist; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: swo:Swol_1795 anti-anti-sigma regulatory factor, SpoIIAA; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Q0AW11 Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Deba_0155
symbol: Deba_0155
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702:IPR000182:IPR016181; KEGG: sfu:Sfum_0746 acetyl-CoA hydrolase/transferase; PFAM: GCN5-related N-acetyltransferase; acetyl-CoA hydrolase/transferase; SPTR: A0LG92 Acetyl-CoA hydrolase/transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_0156
symbol: Deba_0156
gene_biotype: protein_coding
description:
  Putative cache sensor protein; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR013163; KEGG: dma:DMR_14010 methyl-accepting chemotaxis protein; PFAM: Cache type 2 domain protein; SPTR: C4XMV1 Methyl-accepting chemotaxis protein; PFAM: Cache domain.


ensembl_gene_id: Deba_0158
symbol: Deba_0158
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: dal:Dalk_3461 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: B8FLK3 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: Deba_0159
symbol: Deba_0159
gene_biotype: protein_coding
description:
  MgtC/SapB transporter; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: sfu:Sfum_3054 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: A0LMS6 MgtC/SapB transporter; PFAM: MgtC family.


ensembl_gene_id: Deba_0160
symbol: Deba_0160
gene_biotype: protein_coding
description:
  LemA family protein; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: pgn:PGN_1601 conserved hypothetical protein with LemA family domain; PFAM: LemA family protein; SPTR: Q7MX55 LemA protein; PFAM: LemA family.


ensembl_gene_id: Deba_0161
symbol: Deba_0161
gene_biotype: protein_coding
description:
  KEGG: sat:SYN_00536 putative cytoplasmic protein; SPTR: Q2LR08 Hypothetical cytosolic protein; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Deba_0162
symbol: Deba_0162
gene_biotype: protein_coding
description:
  Protein of unknown function DUF477; COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: sus:Acid_0973 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: Q02AF1 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477).


ensembl_gene_id: Deba_0163
symbol: Deba_0163
gene_biotype: protein_coding
description:
  COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001623:IPR002939:IPR008971:IPR018253:IPR 003095; KEGG: sat:SYN_00894 chaperone protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Q2LTT1 Chaperone protein; PFAM: DnaJ domain; DnaJ C terminal region.


ensembl_gene_id: Deba_0164
symbol: Deba_0164
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: dal:Dalk_2351 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q1NVV5 Chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0165
symbol: Deba_0165
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR013976:IPR003607:IPR006675; KEGG: dba:Dbac_0476 putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q1NMB7 Metal-dependent phosphohydrolase, HD subdomain; TIGRFAM: metal dependent phophohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Deba_0167
symbol: Deba_0167
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070:IPR017945:IPR004388; KEGG: ank:AnaeK_1405 SUA5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SPTR: Q1NKA5 Sua5/YciO/YrdC/YwlC; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.


ensembl_gene_id: Deba_0168
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylamine/glycine ligase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR); Belongs to the GARS family.


ensembl_gene_id: Deba_0169
symbol: Deba_0169
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamideformyltra nsferase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607:IPR013982; KEGG: glo:Glov_2760 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SPTR: B3E7F6 Bifunctional purine biosynthesis protein purH; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain.


ensembl_gene_id: Deba_0171
symbol: Deba_0171
gene_biotype: protein_coding
description:
  InterPro IPR000835:IPR011991; KEGG: drm:Dred_0308 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A4J1A3 Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Deba_0173
symbol: Deba_0173
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: sfu:Sfum_3400 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: A0LNS1 Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Deba_0174
symbol: pxpA
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: Deba_0175
symbol: Deba_0175
gene_biotype: protein_coding
description:
  COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833:IPR003778:IPR010016; KEGG: sth:STH379 putative allophanate hydrolase; PFAM: Allophanate hydrolase subunit 1; Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 1; Allophanate hydrolase subunit 2; SPTR: Q67SH9 Putative allophanate hydrolase; PFAM: Metallo-beta-lactamase superfamily; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370; biotin-dependent carboxylase uncharacterized domain.


ensembl_gene_id: Deba_0177
symbol: Deba_0177
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor); SPTR: Q2RFZ4 Putative transmembrane transcriptional regulator (Anti-sigma factor).


ensembl_gene_id: Deba_0178
symbol: Deba_0178
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR007627:IPR013249:IPR013325:IPR013324:IPR 014284; KEGG: sfu:Sfum_0272 fis family transcriptional regulator; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: A0LEX1 Transcriptional regulator, Fis family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Deba_0179
symbol: Deba_0179
gene_biotype: protein_coding
description:
  Protein of unknown function DUF81; InterPro IPR002781; KEGG: dma:DMR_43930 hypothetical membrane protein; PFAM: protein of unknown function DUF81; SPTR: C4XR04 Hypothetical membrane protein; PFAM: Sulfite exporter TauE/SafE.


ensembl_gene_id: Deba_0180
symbol: Deba_0180
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: drt:Dret_2266 protein of unknown function UPF0066; PFAM: protein of unknown function UPF0066; SPTR: C8X553 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: conserved hypothetical protein TIGR00104.


ensembl_gene_id: Deba_0181
symbol: Deba_0181
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR001638:IPR013656:IPR003661:IPR003594:IPR 005467:IPR000014:IPR000700:IPR009082:IPR001610:IPR004358; KEGG: dsa:Desal_2320 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: extracellular solute-binding protein family 3; PAS fold-4 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain pr [...]


ensembl_gene_id: Deba_0183
symbol: Deba_0183
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006690:IPR006664; KEGG: nha:Nham_0236 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: Q1QRL1 OmpA/MotB; PFAM: OmpA family.


ensembl_gene_id: Deba_0184
symbol: Deba_0184
gene_biotype: protein_coding
description:
  KEGG: mta:Moth_1438 hypothetical protein; SPTR: Q2RIJ0 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF364).


ensembl_gene_id: Deba_0185
symbol: Deba_0185
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: sfu:Sfum_3704 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0LPM2 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Deba_0186
symbol: Deba_0186
gene_biotype: protein_coding
description:
  COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ppd:Ppro_1462 transport system permease protein; PFAM: transport system permease protein; SPTR: A1AP08 Transport system permease protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Deba_0187
symbol: Deba_0187
gene_biotype: protein_coding
description:
  Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: sfu:Sfum_3702 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: A0LPM0 Periplasmic binding protein; PFAM: Periplasmic binding protein.


ensembl_gene_id: Deba_0188
symbol: Deba_0188
gene_biotype: protein_coding
description:
  COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: ppd:Ppro_1470 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A1AP16 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: outer membrane autotransporter barrel domain.


ensembl_gene_id: Deba_0189
symbol: Deba_0189
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197; KEGG: ppd:Ppro_1469 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A1AP15 Radical SAM domain protein; PFAM: Periplasmic binding protein; Radical SAM superfamily.


ensembl_gene_id: Deba_0190
symbol: Deba_0190
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ppd:Ppro_1468 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A1AP14 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_0191
symbol: Deba_0191
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG3153 acetyltransferase; InterPro IPR000182:IPR016181; KEGG: dhd:Dhaf_2458 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C6ISG3 Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_0194
symbol: Deba_0194
gene_biotype: protein_coding
description:
  COGs: COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; InterPro IPR005546:IPR006315; KEGG: gdj:Gdia_0206 outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; SPTR: B5ZKP4 Outer membrane autotransporter barrel domain protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain.


ensembl_gene_id: Deba_0195
symbol: Deba_0195
gene_biotype: protein_coding
description:
  Filamentation induced by cAMP protein Fic; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: dol:Dole_0415 filamentation induced by cAMP protein Fic; PFAM: filamentation induced by cAMP protein Fic; SPTR: Q313X5 Fic family protein; manually curated; PFAM: Fic/DOC family.


ensembl_gene_id: Deba_0196
symbol: rhlB
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: Deba_0198
symbol: Deba_0198
gene_biotype: protein_coding
description:
  UspA domain protein; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016:IPR006015:IPR014729; KEGG: rxy:Rxyl_0169 hypothetical protein; PFAM: UspA domain protein; SPTR: C6NV99 UspA domain protein; PFAM: Universal stress protein family.


ensembl_gene_id: Deba_0199
symbol: Deba_0199
gene_biotype: protein_coding
description:
  InterPro IPR001173; KEGG: dal:Dalk_2929 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: B8FBH5 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0200
symbol: Deba_0200
gene_biotype: protein_coding
description:
  COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685:IPR011066:IPR010920; KEGG: mbu:Mbur_2331 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: D1JF06 Putative mechanosensitive channel protein; PFAM: Mechanosensitive ion channel.


ensembl_gene_id: Deba_0201
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Deba_0202
symbol: Deba_0202
gene_biotype: protein_coding
description:
  Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399:IPR005829; KEGG: drt:Dret_0678 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related domain protein; SPTR: C8X0M3 Mammalian cell entry related domain protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.


ensembl_gene_id: Deba_0203
symbol: Deba_0203
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: sat:SYN_00410 ABC-type transport system, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2LS07 ABC-type transport system, ATP-binding component; PFAM: ABC transporter.


ensembl_gene_id: Deba_0204
symbol: Deba_0204
gene_biotype: protein_coding
description:
  Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sat:SYN_00411 ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: protein of unknown function DUF140; SPTR: Q2LS08 ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.


ensembl_gene_id: Deba_0205
symbol: Deba_0205
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine kinase; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR013749:IPR004399; KEGG: pla:Plav_2132 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: A7HV13 Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase.


ensembl_gene_id: Deba_0206
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: Deba_0207
symbol: Deba_0207
gene_biotype: protein_coding
description:
  Mannosyl-3-phosphoglycerate phosphatase family; COGs: COG3769 hydrolase (HAD superfamily); InterPro IPR013200:IPR006381:IPR006379; KEGG: rmr:Rmar_0501 mannosyl-3-phosphoglycerate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; PRIAM: Mannosyl-3-phosphoglycerate phosphatase; SPTR: D0MEV3 Mannosyl-3-phosphoglycerate phosphatase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily  [...]


ensembl_gene_id: Deba_0208
symbol: birA
gene_biotype: protein_coding
description:
  biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: Deba_0209
symbol: Deba_0209
gene_biotype: protein_coding
description:
  InterPro IPR000182:IPR016181; KEGG: dol:Dole_1891 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B6B805 Histone deacetylase superfamily; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_0210
symbol: Deba_0210
gene_biotype: protein_coding
description:
  COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR011095:IPR011761:IPR013816; KEGG: sfu:Sfum_0713 D-alanine--D-alanine ligase domain-containing protein; PFAM: D-alanine--D-alanine ligase domain protein; SPTR: A0LG59 D-alanine--D-alanine ligase domain protein; PFAM: D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase.


ensembl_gene_id: Deba_0211
symbol: Deba_0211
gene_biotype: protein_coding
description:
  COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR011095:IPR011761:IPR013816; KEGG: sfu:Sfum_0712 D-alanine--D-alanine ligase domain-containing protein; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: A0LG58 D-alanine--D-alanine ligase; PFAM: D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase.


ensembl_gene_id: Deba_0212
symbol: Deba_0212
gene_biotype: protein_coding
description:
  Lysine 2,3-aminomutase YodO family protein; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197:IPR003739; KEGG: sfu:Sfum_0711 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; PRIAM: Lysine 2,3-aminomutase; SPTR: A0LG57 L-lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein.


ensembl_gene_id: Deba_0214
symbol: Deba_0214
gene_biotype: protein_coding
description:
  KEGG: ter:Tery_1486 hypothetical protein; SPTR: Q115Q0 Putative uncharacterized protein; PFAM: Sulfotransferase family.


ensembl_gene_id: Deba_0215
symbol: Deba_0215
gene_biotype: protein_coding
description:
  Putative two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR011006:IPR009057:IPR 003593; KEGG: dde:Dde_3040 two component Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: AAA ATPase; SPTR: Q30WW2 Two component transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Sigma-54 interaction domain.


ensembl_gene_id: Deba_0216
symbol: Deba_0216
gene_biotype: protein_coding
description:
  COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: dat:HRM2_22260 HasA; PFAM: glycosyl transferase family 2; SPTR: C0QEI2 HasA; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0217
symbol: Deba_0217
gene_biotype: protein_coding
description:
  Peptidase S58 DmpA; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR005321:IPR016117; KEGG: svi:Svir_29210 L-aminopeptidase/D-esterase; PFAM: peptidase S58 DmpA; SPTR: C7MWD0 L-aminopeptidase/D-esterase; PFAM: Peptidase family S58.


ensembl_gene_id: Deba_0221
symbol: Deba_0221
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR007627:IPR013249:IPR013325:IPR013324:IPR 002011:IPR000838:IPR014284; KEGG: sfu:Sfum_3877 ECF subfamily RNA polymerase sigma-24 factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: A0LQ44 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Deba_0223
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: Deba_0224
symbol: Deba_0224
gene_biotype: protein_coding
description:
  Transketolase; COGs: COG0021 Transketolase; InterProIPR005474:IPR005475:IPR005476:IPR009014:IPR 005478:IPR015941; KEGG: pna:Pnap_4499 transketolase; PFAM: Transketolase domain protein; Transketolase central region; SPTR: A6C7Q1 Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; Belongs to the transketolase family.


ensembl_gene_id: Deba_0226
symbol: Deba_0226
gene_biotype: protein_coding
description:
  COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: dae:Dtox_0718 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C8W1I7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1015).


ensembl_gene_id: Deba_0227
symbol: Deba_0227
gene_biotype: protein_coding
description:
  COGs: COG4123 O-methyltransferase; InterPro IPR007848:IPR002052; KEGG: drt:Dret_0713 methyltransferase small; PFAM: methyltransferase small; SPTR: Q09D37 SAM-dependent methyltransferases; PFAM: Methyltransferase small domain; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Deba_0228
symbol: Deba_0228
gene_biotype: protein_coding
description:
  Protein of unknown function DUF721; InterPro IPR007922; KEGG: ppd:Ppro_1102 hypothetical protein; PFAM: protein of unknown function DUF721; SPTR: A1AN07 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF721).


ensembl_gene_id: Deba_0229
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: Deba_0230
symbol: Deba_0230
gene_biotype: protein_coding
description:
  COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR010075; KEGG: dol:Dole_0483 phosphoribosylformylglycinamidine synthase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: A8ZTM9 Phosphoribosylformylglycinamidine synthase.


ensembl_gene_id: Deba_0231
symbol: Deba_0231
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG3481 HD-superfamily hydrolase; InterPro IPR004365:IPR006674:IPR003607:IPR006675; KEGG: gsu:GSU1122 HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region; SPTR: C6MSS8 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; OB-fold nucleic acid binding domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Deba_0232
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Deba_0233
symbol: Deba_0233
gene_biotype: protein_coding
description:
  COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: afw:Anae109_2451 DNA polymerase III, delta prime subunit; SPTR: A7HD56 DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta' subunit.


ensembl_gene_id: Deba_0234
symbol: Deba_0234
gene_biotype: protein_coding
description:
  PSP1 domain protein; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: dal:Dalk_0025 PSP1 domain protein; PFAM: PSP1 domain protein; SPTR: B8FKC0 PSP1 domain protein; PFAM: PSP1 C-terminal conserved region.


ensembl_gene_id: Deba_0235
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Deba_0236
symbol: Deba_0236
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; InterPro IPR009875; KEGG: dde:Dde_2940 hypothetical protein; PFAM: type IV pilus assembly PilZ; SPTR: Q30X62 Putative uncharacterized protein; PFAM: PilZ domain.


ensembl_gene_id: Deba_0237
symbol: Deba_0237
gene_biotype: protein_coding
description:
  InterPro IPR008874; KEGG: lpf:plpl0013 hypothetical protein; PFAM: TraT complement resistance family protein; SPTR: Q5WRZ4 Putative uncharacterized protein; PFAM: Enterobacterial TraT complement resistance protein.


ensembl_gene_id: Deba_0238
symbol: Deba_0238
gene_biotype: protein_coding
description:
  Dihydropteroate synthase DHPS; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterPro IPR000489:IPR011005; KEGG: dol:Dole_3182 dihydropteroate synthase DhpS; PFAM: dihydropteroate synthase DHPS; SPTR: A9A066 Dihydropteroate synthase DHPS; PFAM: Pterin binding enzyme.


ensembl_gene_id: Deba_0239
symbol: Deba_0239
gene_biotype: protein_coding
description:
  CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; COGs: COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein); InterPro IPR007202:IPR016041:IPR011005:IPR016218; KEGG: dal:Dalk_0682 acetyl-CoA decarbonylase/synthase complex subunit gamma; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; Fe-S cluster domain protein; SPTR: B8FJV9 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit.


ensembl_gene_id: Deba_0240
symbol: Deba_0240
gene_biotype: protein_coding
description:
  COGs: COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit; InterPro IPR004461:IPR011254:IPR016099; KEGG: dal:Dalk_0681 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; PRIAM: CO-methylating acetyl-CoA synthase; SPTR: B8FJV8 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit.


ensembl_gene_id: Deba_0241
symbol: Deba_0241
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase, catalytic subunit; COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterProIPR004137:IPR011254:IPR010047:IPR016101:IPR 016099; KEGG: dat:HRM2_16670 CdhA; PFAM: Prismane; PRIAM: Carbon-monoxide dehydrogenase (acceptor); SPTR: C0QAX6 CdhA; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.


ensembl_gene_id: Deba_0243
symbol: Deba_0243
gene_biotype: protein_coding
description:
  COGs: COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein); InterPro IPR016041:IPR011005; KEGG: dol:Dole_3186 acetyl-CoA decarbonylase/synthase complex subunit delta; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; SPTR: A9A070 CO dehydrogenase/acetyl-CoA synthase delta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.


ensembl_gene_id: Deba_0244
symbol: Deba_0244
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG3640 CO dehydrogenase maturation factor; InterPro IPR002586:IPR014433; KEGG: dal:Dalk_1102 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: B8F959 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_0246
symbol: Deba_0246
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: Deba_0247
symbol: Deba_0247
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 3; COGs: COG0295 Cytidine deaminase; InterPro IPR001638:IPR002125:IPR016193; KEGG: dde:Dde_1459 cytidine deaminase; PFAM: extracellular solute-binding protein family 3; CMP/dCMP deaminase zinc-binding; SMART: extracellular solute-binding protein family 3; SPTR: Q311Y8 Cytidine deaminase; PFAM: Bacterial extracellular solute-binding proteins, family 3; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric.


ensembl_gene_id: Deba_0249
symbol: Deba_0249
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR012336:IPR012335; KEGG: gur:Gura_0192 hypothetical protein; SPTR: A5GDC9 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255.


ensembl_gene_id: Deba_0250
symbol: Deba_0250
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR013656:IPR003018:IPR013767:IPR003661:IPR 003594:IPR001789:IPR005467:IPR000014:IPR000700:IPR011006:I PR009082:IPR004358; KEGG: gur:Gura_2707 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; response regulator receiver; SPT [...]


ensembl_gene_id: Deba_0251
symbol: Deba_0251
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: DHPS_1; dihydrodipicolinate synthase; SPTR: A4CF28 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.


ensembl_gene_id: Deba_0253
symbol: Deba_0253
gene_biotype: protein_coding
description:
  CheW protein; InterPro IPR002545; KEGG: dau:Daud_1560 putative CheW protein; SPTR: B1I533 Putative CheW protein; PFAM: CheW-like domain.


ensembl_gene_id: Deba_0254
symbol: Deba_0254
gene_biotype: protein_coding
description:
  Putative two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR011006:IPR009057:IPR 003593; KEGG: dal:Dalk_0736 putative two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: Q74EW8 Sigma-54 dependent DNA-binding response regulator; PFAM: Response regulator receiver domain; Si [...]


ensembl_gene_id: Deba_0255
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Deba_0256
symbol: Deba_0256
gene_biotype: protein_coding
description:
  InterPro IPR000835:IPR011991; KEGG: cai:Caci_5835 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C3X2H5 Predicted protein.


ensembl_gene_id: Deba_0257
symbol: Deba_0257
gene_biotype: protein_coding
description:
  Methyltransferase FkbM family; InterPro IPR006342; KEGG: mlb:MLBr_02346 hypothetical protein; SPTR: B9YTU9 Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family.


ensembl_gene_id: Deba_0258
symbol: Deba_0258
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: dol:Dole_2160 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: C0GEG4 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Deba_0259
symbol: Deba_0259
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: pag:PLES_58831 putative GGDEF domain protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A3WM11 Signaling protein with a sensor domain and GGDEF domain; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Deba_0260
symbol: rtcB
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: pca:Pcar_0019 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: Q3A8L0 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027; Belongs to the RtcB family.


ensembl_gene_id: Deba_0261
symbol: Deba_0261
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR001450:IPR000415:IPR017896:IPR017900; KEGG: dol:Dole_1688 nitroreductase; PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A9A0J2 Nitroreductase; PFAM: Nitroreductase family.


ensembl_gene_id: Deba_0262
symbol: gpsA
gene_biotype: protein_coding
description:
  NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterProIPR011128:IPR006109:IPR008927:IPR016040:IPR 006168:IPR013328; KEGG: gem:GM21_0007 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: C6E7R1 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Deba_0263
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Deba_0264
symbol: Deba_0264
gene_biotype: protein_coding
description:
  COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: ppd:Ppro_0305 molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: Q1NJ69 Molybdopterin-guanine dinucleotide biosynthesis MobB region; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB.


ensembl_gene_id: Deba_0265
symbol: Deba_0265
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; InterPro IPR006674; KEGG: dps:DP1279 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Q6ANR6 Putative uncharacterized protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Deba_0268
symbol: trmFO
gene_biotype: protein_coding
description:
  Gid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: Deba_0269
symbol: Deba_0269
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013655:IPR013767:IPR003661:IPR003594:IPR 005467:IPR000014:IPR000700:IPR009082:IPR001610:IPR004358; KEGG: ppd:Ppro_3150 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: A1ATS3 Sensor protein; TIGRFAM: PAS se [...]


ensembl_gene_id: Deba_0270
symbol: rsmG
gene_biotype: protein_coding
description:
  Glucose inhibited division protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: Deba_0271
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Deba_0272
symbol: Deba_0272
gene_biotype: protein_coding
description:
  COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: dsa:Desal_1067 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; SPTR: C6C0J7 Single-stranded nucleic acid binding R3H domain protein; PFAM: R3H domain.


ensembl_gene_id: Deba_0273
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: Deba_0274
symbol: Deba_0274
gene_biotype: protein_coding
description:
  Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Deba_0275
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Deba_0276
symbol: rpmH
gene_biotype: protein_coding
description:
  Ribosomal protein L34; InterPro IPR000271; KEGG: drt:Dret_2142 ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: C8X4F2 Ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: Deba_0277
symbol: Deba_0277
gene_biotype: protein_coding
description:
  Cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753:IPR004000; KEGG: sfu:Sfum_2592 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SMART: actin/actin family protein; SPTR: A0LLG8 Rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.


ensembl_gene_id: Deba_0279
symbol: Deba_0279
gene_biotype: protein_coding
description:
  InterPro IPR007227; KEGG: gem:GM21_1756 rod shape-determining protein MreD; SPTR: C6E6G9 Rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.


ensembl_gene_id: Deba_0280
symbol: Deba_0280
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460:IPR012338:IPR017790; KEGG: geo:Geob_3477 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: B9M5R1 Penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.


ensembl_gene_id: Deba_0281
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: Deba_0282
symbol: Deba_0282
gene_biotype: protein_coding
description:
  Protein of unknown function DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: mxa:MXAN_7475 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: Q1CVJ5 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583.


ensembl_gene_id: Deba_0283
symbol: atpF
gene_biotype: protein_coding
description:
  H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Deba_0284
symbol: atpF-2
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Deba_0285
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Deba_0286
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Deba_0287
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Deba_0288
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Deba_0289
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Deba_0290
symbol: Deba_0290
gene_biotype: protein_coding
description:
  Lipolytic protein G-D-S-L family; InterPro IPR001087:IPR013830; KEGG: dal:Dalk_4253 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: B8FM96 Putative uncharacterized protein.


ensembl_gene_id: Deba_0291
symbol: Deba_0291
gene_biotype: protein_coding
description:
  COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR001228; KEGG: ppd:Ppro_0501 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: A1ALB2 Bifunctional protein glmU; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase.


ensembl_gene_id: Deba_0292
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Deba_0293
symbol: Deba_0293
gene_biotype: protein_coding
description:
  KEGG: sat:SYN_03133 putative cytoplasmic protein; SPTR: Q2LRA2 Hypothetical cytosolic protein; PFAM: Protein of unknown function (DUF904).


ensembl_gene_id: Deba_0294
symbol: Deba_0294
gene_biotype: protein_coding
description:
  Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: Deba_0296
symbol: Deba_0296
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COGs: COG1692 conserved hypothetical protein; InterPro IPR004843:IPR005235; KEGG: mta:Moth_1083 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Q74E26 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: conserved hypothetical protein TIGR00282.


ensembl_gene_id: Deba_0297
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: Deba_0298
symbol: Deba_0298
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_4880 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FDC5 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0300
symbol: trpB
gene_biotype: protein_coding
description:
  Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Deba_0301
symbol: Deba_0301
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase (SpoU); COGs: COG0565 rRNA methylase; InterPro IPR001537:IPR004384; KEGG: dma:DMR_35690 putative RNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: C4XLC1 Putative RNA methyltransferase; PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1.


ensembl_gene_id: Deba_0303
symbol: Deba_0303
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: hch:HCH_04023 Co/Zn/Cd cation transporter; PFAM: cation efflux protein; SPTR: Q2SF35 Predicted Co/Zn/Cd cation transporters; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter.


ensembl_gene_id: Deba_0304
symbol: Deba_0304
gene_biotype: protein_coding
description:
  periplasmic/7TM domain sensor diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR011622:IPR011623:IPR000160:IPR018062; KEGG: dal:Dalk_2685 periplasmic/7TM domain sensor diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; SMART: GGDEF domain containing protein; SPTR: B8FIY6 Periplasmic/7TM domain sensor diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM [...]


ensembl_gene_id: Deba_0305
symbol: Deba_0305
gene_biotype: protein_coding
description:
  COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873:IPR020845; KEGG: mhu:Mhun_2392 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Q2FT08 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0306
symbol: Deba_0306
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: bja:bll3651 O-antigen export system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q89P32 RfbA protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_0307
symbol: Deba_0307
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: cef:CE0178 putative O-antigen export system permease protein; PFAM: ABC-2 type transporter; SPTR: C0XTW7 ABC superfamily ATP binding cassette transporter, permease protein; manually curated; PFAM: ABC-2 type transporter.


ensembl_gene_id: Deba_0308
symbol: Deba_0308
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mta:Moth_1443 UbiE/COQ5 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Q2RII5 UbiE/COQ5 methyltransferase; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_0309
symbol: Deba_0309
gene_biotype: protein_coding
description:
  Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: pca:Pcar_3056 ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: periplasmic binding protein; SPTR: Q3A016 ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.


ensembl_gene_id: Deba_0310
symbol: Deba_0310
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: sat:SYN_00216 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2LY12 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; PFAM: ABC transporter.


ensembl_gene_id: Deba_0311
symbol: Deba_0311
gene_biotype: protein_coding
description:
  COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: sat:SYN_00217 ABC-type Fe3+-siderophore transport system, permease component; PFAM: transport system permease protein; SPTR: Q2LY04 ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Deba_0312
symbol: Deba_0312
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: dal:Dalk_5079 protein of unknown function UPF0066; PFAM: protein of unknown function UPF0066; SPTR: B8FDW9 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: conserved hypothetical protein TIGR00104.


ensembl_gene_id: Deba_0313
symbol: Deba_0313
gene_biotype: protein_coding
description:
  COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: ppd:Ppro_1253 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A1HNQ0 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.


ensembl_gene_id: Deba_0314
symbol: Deba_0314
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003661:IPR003594:IPR009082:IPR 004358:IPR005467; KEGG: dal:Dalk_1275 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: B8F9N2 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_0315
symbol: Deba_0315
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dat:HRM2_07150 sigma-54 dependent DNA-binding response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C0QJH6 Sigma-54 dependent DNA-binding response regulator; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0317
symbol: Deba_0317
gene_biotype: protein_coding
description:
  Response regulator receiver protein; COGs: COG1102 Cytidylate kinase; KEGG: dol:Dole_2398 response regulator receiver protein; SPTR: A8ZVL5 Response regulator receiver protein.


ensembl_gene_id: Deba_0318
symbol: Deba_0318
gene_biotype: protein_coding
description:
  TrkA-C domain protein; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037:IPR016040; KEGG: dol:Dole_2399 TrkA domain-containing protein; PFAM: TrkA-C domain protein; Citrate transporter; SPTR: A8ZVL6 TrkA-C domain protein; PFAM: TrkA-C domain; Citrate transporter.


ensembl_gene_id: Deba_0319
symbol: Deba_0319
gene_biotype: protein_coding
description:
  InterPro IPR014729; KEGG: dol:Dole_2400 hypothetical protein; SPTR: A8ZVL7 Putative uncharacterized protein; PFAM: Universal stress protein family.


ensembl_gene_id: Deba_0320
symbol: Deba_0320
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR002197:IPR011006:IPR 009057:IPR003593:IPR020441; KEGG: dol:Dole_2401 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: A8ZVL8 Two component, sigma54 specific, transcriptional regulator, Fis fam [...]


ensembl_gene_id: Deba_0322
symbol: Deba_0322
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; SPTR: A0E9P2 Chromosome undetermined scaffold_85, whole genome shotgun sequence.


ensembl_gene_id: Deba_0323
symbol: Deba_0323
gene_biotype: protein_coding
description:
  Protein of unknown function DUF134; COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: rru:Rru_A1194 hypothetical protein; PFAM: protein of unknown function DUF134; SPTR: Q2RV50 UPF0251 protein Rru_A1194; PFAM: Protein of unknown function DUF134; Belongs to the UPF0251 family.


ensembl_gene_id: Deba_0324
symbol: Deba_0324
gene_biotype: protein_coding
description:
  InterPro IPR010305; KEGG: dsa:Desal_2293 protein of unknown function DUF903; PFAM: protein of unknown function DUF903; SPTR: C6BWR9 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF903).


ensembl_gene_id: Deba_0325
symbol: Deba_0325
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: dal:Dalk_2350 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8FAV7 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_0326
symbol: Deba_0326
gene_biotype: protein_coding
description:
  COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterProIPR003660:IPR013656:IPR003661:IPR003594:IPR 017232:IPR009082:IPR000014:IPR004358:IPR005467; KEGG: gsu:GSU0812 nitrogen regulation protein NtrY, putative; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: Q [...]


ensembl_gene_id: Deba_0327
symbol: Deba_0327
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR002197:IPR011006:IPR 009057:IPR003593:IPR020441; KEGG: sat:SYN_02713 response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Q2LRW3 Response regulator containing sigma 54 interaction domain; PFAM: Response regulator receiver domain; Bacterial regulat [...]


ensembl_gene_id: Deba_0329
symbol: Deba_0329
gene_biotype: protein_coding
description:
  COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR016040:IPR006367; KEGG: sfu:Sfum_1588 siroheme synthase; SPTR: A0LIM3 Precorrin-2 dehydrogenase; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain.


ensembl_gene_id: Deba_0330
symbol: Deba_0330
gene_biotype: protein_coding
description:
  Cytochrome c assembly protein; COGs: COG4137 ABC-type uncharacterized transport system permease component; InterPro IPR002541; KEGG: pca:Pcar_3065 cytochrome c biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: Q3A007 Cytochrome c biogenesis protein; PFAM: Cytochrome C assembly protein.


ensembl_gene_id: Deba_0331
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Deba_0333
symbol: Deba_0333
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1458; InterPro IPR009923; KEGG: jan:Jann_3624 hypothetical protein; PFAM: protein of unknown function DUF1458; SPTR: A4EEU5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1458).


ensembl_gene_id: Deba_0334
symbol: Deba_0334
gene_biotype: protein_coding
description:
  Methyltransferase small; COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR007848; KEGG: dal:Dalk_1101 ribosomal L11 methyltransferase; PFAM: methyltransferase small; SPTR: B8F958 Ribosomal L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase.


ensembl_gene_id: Deba_0335
symbol: ilvD
gene_biotype: protein_coding
description:
  COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR000581:IPR004404:IPR020558; KEGG: mja:MJ1276 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: C5U5V1 Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: Deba_0336
symbol: Deba_0336
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR012001:IPR012000:IPR011766:IPR012846:IPR 000399; KEGG: mtp:Mthe_0110 acetolactate synthase 3 catalytic subunit; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A0B5D8 Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, [...]


ensembl_gene_id: Deba_0337
symbol: Deba_0337
gene_biotype: protein_coding
description:
  COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: pth:PTH_0528 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: A5D4Z3 Acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit.


ensembl_gene_id: Deba_0338
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: Deba_0339
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Deba_0340
symbol: Deba_0340
gene_biotype: protein_coding
description:
  KEGG: bra:BRADO0955 putative thioesterase/thiol ester dehydrase-isomerase; SPTR: A4YLU5 Putative thioesterase/thiol ester dehydrase-isomerase; PFAM: Thioesterase superfamily.


ensembl_gene_id: Deba_0341
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: Deba_0342
symbol: Deba_0342
gene_biotype: protein_coding
description:
  COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804:IPR019818; KEGG: afu:AF0628 multifunctional 3-isopropylmalate dehydrogenase/D-malate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: O29627 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isopropylmalate/isohomocitrate dehydrogenases.


ensembl_gene_id: Deba_0343
symbol: Deba_0343
gene_biotype: protein_coding
description:
  COGs: COG3527 Alpha-acetolactate decarboxylase; InterPro IPR005128; KEGG: pth:PTH_2358 alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase; PRIAM: Acetolactate decarboxylase; SPTR: Q1JWS4 Acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase; PFAM: Alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase.


ensembl_gene_id: Deba_0344
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: Deba_0345
symbol: asnS
gene_biotype: protein_coding
description:
  COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR004365:IPR004364:IPR016027:IPR012340:IPR 002312:IPR004522:IPR006195; KEGG: dvu:DVU0007 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: Asparagine--tRNA ligase; SPTR: C5TZ48 Asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase.


ensembl_gene_id: Deba_0346
symbol: Deba_0346
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: rce:RC1_1008 chemotaxis MotB protein; PFAM: OmpA/MotB domain protein; SPTR: A6EY60 Flagellar motor protein; PFAM: OmpA family.


ensembl_gene_id: Deba_0347
symbol: Deba_0347
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898:IPR000540; KEGG: amt:Amet_2714 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A6TRP8 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family.


ensembl_gene_id: Deba_0348
symbol: Deba_0348
gene_biotype: protein_coding
description:
  COGs: COG2945 hydrolase of the alpha/beta superfamily; KEGG: dol:Dole_3190 alpha/beta hydrolase family protein; SPTR: A9A074 Alpha/beta hydrolase family protein; PFAM: X-Pro dipeptidyl-peptidase (S15 family).


ensembl_gene_id: Deba_0349
symbol: Deba_0349
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013767:IPR003661:IPR003594:IPR009082:IPR 000014:IPR004358:IPR005467; KEGG: sfu:Sfum_2495 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: A0LL72 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-l [...]


ensembl_gene_id: Deba_0350
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Deba_0351
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Deba_0354
symbol: Deba_0354
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422; KEGG: sus:Acid_2338 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C5T0P3 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Deba_0355
symbol: Deba_0355
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ppf:Pput_3929 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: C5T0P4 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0356
symbol: Deba_0356
gene_biotype: protein_coding
description:
  Transferase hexapeptide repeat containing protein; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR001451:IPR011004:IPR018357; KEGG: rpi:Rpic_0635 hypothetical protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: B2U7C4 Putative uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: Deba_0357
symbol: Deba_0357
gene_biotype: protein_coding
description:
  WxcM domain protein; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterProIPR001451:IPR008894:IPR011004:IPR011051:IPR 018357; KEGG: rfr:Rfer_0690 WxcM-like; PFAM: WxcM domain protein domain protein; transferase hexapeptide repeat containing protein; SPTR: C5T0P5 WxcM domain protein; PFAM: WxcM-like, C-terminal.


ensembl_gene_id: Deba_0358
symbol: Deba_0358
gene_biotype: protein_coding
description:
  GtrA family protein; InterPro IPR007267; KEGG: gym:GYMC10_5809 GtrA family protein; PFAM: GtrA family protein; SPTR: C5T0P6 GtrA family protein; PFAM: GtrA-like protein.


ensembl_gene_id: Deba_0360
symbol: Deba_0360
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: gur:Gura_4185 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: A5G960 Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase.


ensembl_gene_id: Deba_0361
symbol: Deba_0361
gene_biotype: protein_coding
description:
  InterPro IPR011467; KEGG: dal:Dalk_3698 protein of unknown function DUF1573; PFAM: protein of unknown function DUF1573; SPTR: B8FLN2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573).


ensembl_gene_id: Deba_0362
symbol: Deba_0362
gene_biotype: protein_coding
description:
  Polyketide cyclase/dehydrase; InterPro IPR019587; KEGG: dol:Dole_0158 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: A8ZSQ5 Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.


ensembl_gene_id: Deba_0363
symbol: Deba_0363
gene_biotype: protein_coding
description:
  COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; KEGG: dol:Dole_2797 putative tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase; SPTR: Q1K1V6 Thiamine biosynthesis protein; PFAM: Thiamine biosynthesis protein (ThiI).


ensembl_gene_id: Deba_0364
symbol: Deba_0364
gene_biotype: protein_coding
description:
  Protein of unknown function DUF434; COGs: COG2454 conserved hypothetical protein; InterPro IPR007368; KEGG: scl:sce7378 hypothetical protein; PFAM: protein of unknown function DUF434; SPTR: A9EYI8 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF434).


ensembl_gene_id: Deba_0365
symbol: Deba_0365
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR013767:IPR003594:IPR001789:IPR011006:IPR 000014:IPR001610:IPR004358:IPR005467:IPR000700; KEGG: rpd:RPD_3277 ATP-binding region, ATPase-like; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; SPTR: Q134I8 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-li [...]


ensembl_gene_id: Deba_0366
symbol: Deba_0366
gene_biotype: protein_coding
description:
  COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056:IPR011060:IPR013785; KEGG: gyc:GYMC61_1959 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: C9RZQ3 Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.


ensembl_gene_id: Deba_0367
symbol: Deba_0367
gene_biotype: protein_coding
description:
  KEGG: lxx:Lxx09000 hypothetical protein; SPTR: A6FRA1 Putative uncharacterized protein; PFAM: VanZ like family.


ensembl_gene_id: Deba_0368
symbol: Deba_0368
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0060; COGs: COG1742 conserved hypothetical protein; InterPro IPR003844; KEGG: cja:CJA_3703 hypothetical protein; PFAM: protein of unknown function UPF0060; SPTR: B3PHW0 UPF0060 membrane protein CJA_3703; PFAM: Uncharacterised BCR, YnfA/UPF0060 family.


ensembl_gene_id: Deba_0370
symbol: Deba_0370
gene_biotype: protein_coding
description:
  COGs: COG1196 Chromosome segregation ATPase; KEGG: hypothetical protein; SPTR: Q4Q3D8 Putative uncharacterized protein.


ensembl_gene_id: Deba_0371
symbol: Deba_0371
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tcu:Tcur_3642 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: D1CAK6 Putative uncharacterized protein.


ensembl_gene_id: Deba_0372
symbol: Deba_0372
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1713; InterPro IPR013177; KEGG: dat:HRM2_30640 hypothetical protein; PFAM: Protein of unknown function DUF1713; SPTR: C0QKQ7 Putative uncharacterized protein; PFAM: Mitochondrial domain of unknown function (DUF1713).


ensembl_gene_id: Deba_0373
symbol: Deba_0373
gene_biotype: protein_coding
description:
  COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258:IPR000189; KEGG: maq:Maqu_2905 lytic transglycosylase, catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: A1U4R0 Lytic transglycosylase, catalytic; PFAM: Transglycosylase SLT domain.


ensembl_gene_id: Deba_0374
symbol: Deba_0374
gene_biotype: protein_coding
description:
  Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: Deba_0375
symbol: mtaD
gene_biotype: protein_coding
description:
  Amidohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: Deba_0376
symbol: Deba_0376
gene_biotype: protein_coding
description:
  Amidohydrolase; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680:IPR011059; KEGG: sat:SYN_01991 chlorohydrolase/deaminase family protein; PFAM: amidohydrolase; SPTR: Q2LUH4 5-methylthioadenosine/S-adenosylhomocysteine deaminase 2; PFAM: Amidohydrolase family.


ensembl_gene_id: Deba_0377
symbol: Deba_0377
gene_biotype: protein_coding
description:
  Endonuclease/exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: sru:SRU_2696 endonuclease/exonuclease/phosphatase family protein, putative; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: B4WQH8 Endonuclease/exonuclease/phosphatase family; PFAM: Endonuclease/Exonuclease/phosphatase family.


ensembl_gene_id: Deba_0380
symbol: Deba_0380
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0052 and CofD; COGs: COG0391 conserved hypothetical protein; InterPro IPR002882; KEGG: dma:DMR_20270 hypothetical protein; PFAM: protein of unknown function UPF0052 and CofD; SPTR: C4XRH3 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related.


ensembl_gene_id: Deba_0381
symbol: Deba_0381
gene_biotype: protein_coding
description:
  HPr kinase; KEGG: dma:DMR_18060 hypothetical protein; SPTR: C4XQD2 Putative uncharacterized protein.


ensembl_gene_id: Deba_0382
symbol: Deba_0382
gene_biotype: protein_coding
description:
  RimK domain protein ATP-grasp; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651:IPR011761; KEGG: dba:Dbac_2700 RimK domain protein ATP-grasp; PFAM: RimK domain protein ATP-grasp; SPTR: C7LTL0 RimK domain protein ATP-grasp; PFAM: RimK-like ATP-grasp domain.


ensembl_gene_id: Deba_0383
symbol: Deba_0383
gene_biotype: protein_coding
description:
  COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170:IPR002575:IPR011009; KEGG: dma:DMR_33380 hypothetical protein; PFAM: PhoU family protein; aminoglycoside phosphotransferase; SPTR: C4XK89 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF227); PhoU domain.


ensembl_gene_id: Deba_0386
symbol: Deba_0386
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_0599 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FHL6 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0387
symbol: Deba_0387
gene_biotype: protein_coding
description:
  Aryldialkylphosphatase; COGs: COG1735 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001559:IPR017947; KEGG: dal:Dalk_0598 aryldialkylphosphatase; PFAM: aryldialkylphosphatase; SPTR: B8FHL5 Aryldialkylphosphatase; PFAM: Phosphotriesterase family.


ensembl_gene_id: Deba_0388
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: Deba_0389
symbol: Deba_0389
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR013976:IPR003607:IPR006675; KEGG: dal:Dalk_0653 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; SPTR: B8FJT0 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Deba_0390
symbol: Deba_0390
gene_biotype: protein_coding
description:
  Molybdopterin dinucleotide-binding region; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006657:IPR009010; KEGG: dol:Dole_1621 nitrate reductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: A9A025 Nitrate reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Deba_0391
symbol: Deba_0391
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991:IPR000792; KEGG: gme:Gmet_2133 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Q39TR2 Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Deba_0392
symbol: Deba_0392
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013656:IPR013767:IPR003661:IPR003594:IPR 001789:IPR011006:IPR009082:IPR000014:IPR001610:IPR004358:I PR005467:IPR000700; KEGG: ppd:Ppro_3150 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing pro [...]


ensembl_gene_id: Deba_0393
symbol: Deba_0393
gene_biotype: protein_coding
description:
  Beta-lactamase; COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: rpd:RPD_2374 beta-lactamase-like; SPTR: Q137Y3 Beta-lactamase-like; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0394
symbol: Deba_0394
gene_biotype: protein_coding
description:
  InterPro IPR011006:IPR001789; KEGG: dal:Dalk_2680 response regulator receiver protein; SMART: response regulator receiver; SPTR: B8FIY1 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0395
symbol: Deba_0395
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR001732:IPR014026:IPR014027:IPR008927:IPR 016040:IPR017476; KEGG: dal:Dalk_1698 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase; SPTR: B8FEJ1 Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mann [...]


ensembl_gene_id: Deba_0396
symbol: Deba_0396
gene_biotype: protein_coding
description:
  ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: gbm:Gbem_1326 ROK family protein; PFAM: ROK family protein; SPTR: B5EI81 ROK family protein; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).


ensembl_gene_id: Deba_0397
symbol: Deba_0397
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat protein; InterProIPR011717:IPR013105:IPR019734:IPR011990:IPR 013026; KEGG: dal:Dalk_1963 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide repeat; SPTR: B8FEY2 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.


ensembl_gene_id: Deba_0399
symbol: Deba_0399
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hba:Hbal_2364 glycosyl transferase family 39; SPTR: C6XNA0 Glycosyl transferase family 39.


ensembl_gene_id: Deba_0400
symbol: Deba_0400
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR011009:IPR000719; KEGG: dsa:Desal_2316 hypothetical protein; SPTR: C6BWU2 Putative uncharacterized protein.


ensembl_gene_id: Deba_0401
symbol: Deba_0401
gene_biotype: protein_coding
description:
  UspA domain protein; InterPro IPR006016:IPR014729:IPR006015; KEGG: dba:Dbac_2062 UspA domain protein; PFAM: UspA domain protein; SPTR: C7LNS3 UspA domain protein; PFAM: Universal stress protein family.


ensembl_gene_id: Deba_0402
symbol: Deba_0402
gene_biotype: protein_coding
description:
  COGs: COG3920 Signal transduction histidine kinase; InterProIPR013767:IPR013655:IPR011495:IPR003594:IPR 000014:IPR001610:IPR005467:IPR000700; KEGG: ppd:Ppro_3009 hypothetical protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A1ATD6 Signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-li [...]


ensembl_gene_id: Deba_0403
symbol: Deba_0403
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR013655:IPR013767:IPR003661:IPR 003594:IPR011006:IPR009082:IPR000014:IPR001610:IPR004358:I PR005467:IPR000700; KEGG: sfu:Sfum_3740 putative PAS/PAC sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region  [...]


ensembl_gene_id: Deba_0405
symbol: Deba_0405
gene_biotype: protein_coding
description:
  Cyclase family protein; COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325:IPR000169; KEGG: dal:Dalk_1541 cyclase family protein; PFAM: cyclase family protein; SPTR: B8FAE3 Cyclase family protein; PFAM: Putative cyclase.


ensembl_gene_id: Deba_0406
symbol: Deba_0406
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dal:Dalk_0098 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: B8FKJ3 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_0407
symbol: htpX
gene_biotype: protein_coding
description:
  Peptidase M48 Ste24p; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: glo:Glov_0554 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SPTR: B3E370 Peptidase M48 Ste24p; PFAM: Peptidase family M48; Belongs to the peptidase M48B family.


ensembl_gene_id: Deba_0408
symbol: Deba_0408
gene_biotype: protein_coding
description:
  Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254:IPR001478:IPR009003:IPR001940; KEGG: dde:Dde_3776 PDZ/DHR/GLGF; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Q30US8 PDZ/DHR/GLGF; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family.


ensembl_gene_id: Deba_0410
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Deba_0411
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Deba_0412
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Deba_0413
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Deba_0414
symbol: Deba_0414
gene_biotype: protein_coding
description:
  Protein of unknown function DUF362; COGs: COG2006 conserved hypothetical protein; InterPro IPR007160:IPR001450:IPR017896:IPR017900; KEGG: gsu:GSU0494 iron-sulfur cluster-binding protein; PFAM: protein of unknown function DUF362; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1TQG7 Uncharacterized conserved protein; PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362).


ensembl_gene_id: Deba_0415
symbol: Deba_0415
gene_biotype: protein_coding
description:
  Peptidoglycan-binding lysin domain protein; InterPro IPR018392:IPR002482; KEGG: mpt:Mpe_A2160 putative transmembrane protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: A2SHS7 Putative transmembrane protein; PFAM: LysM domain.


ensembl_gene_id: Deba_0416
symbol: Deba_0416
gene_biotype: protein_coding
description:
  Histidine kinase; COGs: COG1639 signal transduction protein; InterPro IPR013976:IPR003661:IPR003594:IPR005467; KEGG: aeh:Mlg_1873 diguanylate cyclase; PFAM: Metal-dependent hydrolase HDOD; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Q0A7H0 Diguanylate cyclase; PFAM: HDOD domain; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_0419
symbol: Deba_0419
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: nth:Nther_1582 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B2A4I0 NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Deba_0420
symbol: Deba_0420
gene_biotype: protein_coding
description:
  ybaK/ebsC protein; COGs: COG2606 conserved hypothetical protein; InterPro IPR007214:IPR004369; KEGG: gsu:GSU3088 YbaK/EbsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: Q748B9 YbaK/EbsC protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: Deba_0421
symbol: Deba_0421
gene_biotype: protein_coding
description:
  KEGG: dal:Dalk_4656 integrin-like repeat-containing protein; SPTR: B8FNQ3 Integrin-like repeat-containing protein.


ensembl_gene_id: Deba_0423
symbol: Deba_0423
gene_biotype: protein_coding
description:
  COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: dol:Dole_1493 putative 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: A8ZZE4 Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein.


ensembl_gene_id: Deba_0424
symbol: sat
gene_biotype: protein_coding
description:
  COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); InterPro IPR002650:IPR015947:IPR014729; KEGG: abo:ABO_0730 sulfate adenylyltransferase; PFAM: ATP-sulfurylase; PRIAM: Sulfate adenylyltransferase; SPTR: B9ZMM6 Sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase; Belongs to the sulfate adenylyltransferase family.


ensembl_gene_id: Deba_0425
symbol: Deba_0425
gene_biotype: protein_coding
description:
  Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: Deba_0427
symbol: Deba_0427
gene_biotype: protein_coding
description:
  Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterProIPR011765:IPR007863:IPR011249:IPR011237:IPR 001431; KEGG: mxa:MXAN_1141 M16 family peptidase; PFAM: peptidase M16 domain protein; SPTR: Q1DD72 Peptidase, M16 (Pitrilysin) family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.


ensembl_gene_id: Deba_0428
symbol: Deba_0428
gene_biotype: protein_coding
description:
  COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sat:SYN_02851 Zn-dependent hydrolase; SPTR: Q2LSY9 Zn-dependent hydrolase including glyoxylases; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0430
symbol: Deba_0430
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG3375 conserved hypothetical protein; InterPro IPR000182:IPR016181; KEGG: tpe:Tpen_1785 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: B7A7E4 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_0431
symbol: Deba_0431
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545:IPR001650:IPR005580:IPR014001:IPR 014021:IPR014014:IPR000629; KEGG: dps:DP1690 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Q6AMK6 Probable ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: Deba_0432
symbol: Deba_0432
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hoh:Hoch_5429 TonB-dependent receptor; SPTR: C1WWS0 2-oxoglutarate dehydrogenase E2 component.


ensembl_gene_id: Deba_0433
symbol: Deba_0433
gene_biotype: protein_coding
description:
  Pyruvate carboxyltransferase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013785; KEGG: cag:Cagg_1303 pyruvate carboxyltransferase; PFAM: pyruvate carboxyltransferase; SPTR: B8G8E9 Pyruvate carboxyltransferase; PFAM: HMGL-like.


ensembl_gene_id: Deba_0434
symbol: Deba_0434
gene_biotype: protein_coding
description:
  Nitrogenase cofactor biosynthesis protein NifB; COGs: COG0535 Fe-S oxidoreductase; InterProIPR007197:IPR003731:IPR006638:IPR013785:IPR 005980; KEGG: sfu:Sfum_1011 nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM domain protein; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C8QZK3 Nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.


ensembl_gene_id: Deba_0435
symbol: Deba_0435
gene_biotype: protein_coding
description:
  Nitrogenase; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510:IPR000318; KEGG: dma:DMR_17510 nitrogenase molybdenum-iron cofactor biosynthesis protein; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: C4XQ77 Nitrogenase molybdenum-iron cofactor biosynthesis protein; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Deba_0436
symbol: Deba_0436
gene_biotype: protein_coding
description:
  Nitrogenase MoFe cofactor biosynthesis protein NifE; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510:IPR005973:IPR000318; KEGG: dba:Dbac_0841 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; SPTR: C7LPB6 Nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Deba_0438
symbol: Deba_0438
gene_biotype: protein_coding
description:
  Dinitrogenase iron-molybdenum cofactor biosynthesis protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR003731; KEGG: dsa:Desal_0442 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; SPTR: C6BX29 Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor.


ensembl_gene_id: Deba_0439
symbol: Deba_0439
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Deba_0440
symbol: Deba_0440
gene_biotype: protein_coding
description:
  COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510:IPR005972:IPR010143:IPR000318; KEGG: dsa:Desal_0444 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: C8R0M9 Nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain.


ensembl_gene_id: Deba_0441
symbol: Deba_0441
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR011322:IPR015867:IPR017918; KEGG: dsa:Desal_0445 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: C6BX32 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Deba_0442
symbol: Deba_0442
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR011322:IPR015867; KEGG: dba:Dbac_0835 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: C7LPB0 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Deba_0443
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: Deba_0444
symbol: Deba_0444
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037:IPR016040; KEGG: dba:Dbac_0339 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: C7LVC4 TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain.


ensembl_gene_id: Deba_0445
symbol: Deba_0445
gene_biotype: protein_coding
description:
  H(+)-transporting two-sector ATPase; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: pca:Pcar_0086 TrkH family potassium uptake protein; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: Q3A8E3 Potassium uptake protein, TrkH family; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family.


ensembl_gene_id: Deba_0446
symbol: surE
gene_biotype: protein_coding
description:
  Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: Deba_0447
symbol: Deba_0447
gene_biotype: protein_coding
description:
  Putative regulatory protein FmdB; InterPro IPR013429; KEGG: rmu:RMDY18_05530 hypothetical protein; PFAM: Putative regulatory protein FmdB; SPTR: C6R3Q5 Type I antifreeze protein; PFAM: Zinc ribbon domain.


ensembl_gene_id: Deba_0448
symbol: Deba_0448
gene_biotype: protein_coding
description:
  KEGG: dae:Dtox_1266 protein of unknown function UPF0153; SPTR: C8W5G6 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Deba_0449
symbol: Deba_0449
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: dat:HRM2_39120 HD-GYP hydrolase domain family protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C0QBG8 HD-GYP hydrolase domain family protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Deba_0450
symbol: Deba_0450
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dra:DR_2413 chromate transport protein; SPTR: A4TWU0 Putative uncharacterized protein.


ensembl_gene_id: Deba_0451
symbol: Deba_0451
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_0904 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: D1C274 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0452
symbol: Deba_0452
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mba:Mbar_A0373 hexosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q46FI5 Hexosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0453
symbol: Deba_0453
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: mac:MA1178 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Q8TRJ7 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_0454
symbol: Deba_0454
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: mxa:MXAN_4622 O-antigen ABC exporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q1D3I3 O-antigen ABC exporter, ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_0455
symbol: Deba_0455
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR016040:IPR017473:IPR017475; KEGG: mxa:MXAN_2922 sugar transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Q1PWC3 Similar to capsular polysaccharide synthesis protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; e [...]


ensembl_gene_id: Deba_0456
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: Deba_0457
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: Deba_0458
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: Deba_0459
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Deba_0461
symbol: Deba_0461
gene_biotype: protein_coding
description:
  Sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR010523:IPR004096:IPR002078:IPR002197:IPR 009057:IPR003593:IPR020441; KEGG: dal:Dalk_3884 sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; 4-vinyl reductase 4VR; Activator of aromatic catabolism; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: B8FCF2 Sigma54 specific transcriptional regulator, Fis family; PFAM: Activator of aromatic catabolism; Bacterial r [...]


ensembl_gene_id: Deba_0463
symbol: Deba_0463
gene_biotype: protein_coding
description:
  Peptidase S16 lon domain protein; COGs: COG1750 serine protease; InterPro IPR008269:IPR020568; KEGG: pfu:PF1438 hypothetical protein; PFAM: peptidase S16 lon domain protein; SPTR: Q8U0Z2 Putative uncharacterized protein; PFAM: Lon protease (S16) C-terminal proteolytic domain.


ensembl_gene_id: Deba_0464
symbol: Deba_0464
gene_biotype: protein_coding
description:
  InterPro IPR004360; KEGG: mac:MA0108 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C0EBN9 Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.


ensembl_gene_id: Deba_0465
symbol: Deba_0465
gene_biotype: protein_coding
description:
  acetoacetyl-CoA synthase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873:IPR005914:IPR020845; KEGG: noc:Noc_2047 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Q3J9I9 Acetoacetyl-CoA synthase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase.


ensembl_gene_id: Deba_0466
symbol: Deba_0466
gene_biotype: protein_coding
description:
  Beta-lactamase domain-containing protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dol:Dole_2556 beta-lactamase domain-containing protein; SPTR: A8ZWM9 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0467
symbol: Deba_0467
gene_biotype: protein_coding
description:
  COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027:IPR000103; KEGG: dal:Dalk_2354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B8FAW1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Deba_0468
symbol: Deba_0468
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: kse:Ksed_04660 major facilitator superfamily transporter; SPTR: B0BI40 Putative integron gene cassette protein.


ensembl_gene_id: Deba_0469
symbol: Deba_0469
gene_biotype: protein_coding
description:
  NAD(+) diphosphatase; COGs: COG2816 NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding; InterProIPR015375:IPR015376:IPR000086:IPR015797:IPR 020084; KEGG: scl:sce4370 NADH pyrophosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase; PRIAM: NAD(+) diphosphatase; SPTR: A9F2Z4 NADH pyrophosphatase; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain.


ensembl_gene_id: Deba_0470
symbol: Deba_0470
gene_biotype: protein_coding
description:
  KEGG: bpy:Bphyt_2747 thioesterase superfamily protein; SPTR: B2SZF3 Thioesterase superfamily protein; PFAM: Thioesterase superfamily.


ensembl_gene_id: Deba_0471
symbol: Deba_0471
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ote:Oter_1689 cell wall surface anchor family protein; SPTR: B1ZUT9 Cell wall surface anchor family protein.


ensembl_gene_id: Deba_0472
symbol: Deba_0472
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sus:Acid_7814 YVTN beta-propeller repeat-containing protein; SPTR: Q01NQ8 40-residue YVTN family beta-propeller repeat protein.


ensembl_gene_id: Deba_0474
symbol: Deba_0474
gene_biotype: protein_coding
description:
  COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662:IPR012910:IPR000531:IPR010917; KEGG: wsu:WS1416 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; SPTR: Q7MRE4 HUGA; PFAM: TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain.


ensembl_gene_id: Deba_0475
symbol: Deba_0475
gene_biotype: protein_coding
description:
  COGs: COG2875 Precorrin-4 methylase; InterPro IPR000878:IPR014777:IPR014776; KEGG: ppd:Ppro_1250 uroporphyrin-III C/tetrapyrrole methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Q1JX26 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases.


ensembl_gene_id: Deba_0476
symbol: Deba_0476
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mmi:MMAR_5339 PE-PGRS family protein; SPTR: B2HLL1 PE-PGRS family protein.


ensembl_gene_id: Deba_0478
symbol: Deba_0478
gene_biotype: protein_coding
description:
  COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099:IPR016040; KEGG: dal:Dalk_1765 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: B8FFQ7 Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase.


ensembl_gene_id: Deba_0479
symbol: Deba_0479
gene_biotype: protein_coding
description:
  COGs: COG0077 Prephenate dehydratase; InterProIPR020822:IPR001086:IPR002912:IPR008242:IPR 002701:IPR018528; KEGG: pca:Pcar_1887 chorismate mutase-P and prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein; SPTR: Q1K0T9 Chorismate mutase; PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II.


ensembl_gene_id: Deba_0480
symbol: Deba_0480
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR013785:IPR006268; KEGG: sat:SYN_01940 phospho-2-dehydro-3-deoxyheptanoate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: Q2LUE1 Phospho-2-dehydro-3-deoxyheptanoate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.


ensembl_gene_id: Deba_0481
symbol: Deba_0481
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR001450:IPR006963:IPR006656:IPR 009051:IPR017896:IPR017900:IPR006655; KEGG: dds:Ddes_1544 molybdopterin oxidoreductase Fe4s4 region; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8J119 Molybdopterin oxidoreductase Fe4S4 region; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain.


ensembl_gene_id: Deba_0482
symbol: Deba_0482
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR006656:IPR006657:IPR009010; KEGG: sfu:Sfum_0031 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: A0LE82 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Deba_0483
symbol: Deba_0483
gene_biotype: protein_coding
description:
  AsmA family protein; InterPro IPR007844:IPR016160; KEGG: noc:Noc_2265 hypothetical protein; PFAM: AsmA family protein; SPTR: Q3J8X3 Putative uncharacterized protein; PFAM: AsmA family.


ensembl_gene_id: Deba_0485
symbol: Deba_0485
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004090:IPR018212; KEGG: dba:Dbac_1917 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: C0GS91 Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0486
symbol: Deba_0486
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mgi:Mflv_4017 alanine dehydrogenase; SPTR: A4TCI0 L-alanine dehydrogenase.


ensembl_gene_id: Deba_0487
symbol: Deba_0487
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR019575:IPR013027:IPR009051:IPR012285:IPR 016040:IPR000759:IPR001949; KEGG: dds:Ddes_1543 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: B8J118 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; manually curated; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH-u [...]


ensembl_gene_id: Deba_0488
symbol: Deba_0488
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR019574:IPR001450:IPR006963:IPR 006656:IPR017896:IPR017900; KEGG: sfu:Sfum_3509 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LP28 Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S bind [...]


ensembl_gene_id: Deba_0489
symbol: Deba_0489
gene_biotype: protein_coding
description:
  Nuclease (SNase domain protein); COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021:IPR016071; KEGG: mpt:Mpe_B0143 putative nuclease; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); SPTR: A2SMY2 Putative nuclease; PFAM: Staphylococcal nuclease homologue.


ensembl_gene_id: Deba_0490
symbol: Deba_0490
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Deba_0491
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: Deba_0493
symbol: Deba_0493
gene_biotype: protein_coding
description:
  Integrase catalytic region; InterPro IPR001584:IPR012337:IPR009057; KEGG: dvl:Dvul_0877 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: A1VBQ7 Integrase, catalytic region; PFAM: Integrase core domain.


ensembl_gene_id: Deba_0494
symbol: Deba_0494
gene_biotype: protein_coding
description:
  KEGG: cpb:Cphamn1_2546 hypothetical protein; SPTR: B3EQE2 Putative uncharacterized protein; PFAM: Putative Phosphatase.


ensembl_gene_id: Deba_0496
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Deba_0497
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Deba_0498
symbol: rlmN
gene_biotype: protein_coding
description:
  Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: Deba_0499
symbol: Deba_0499
gene_biotype: protein_coding
description:
  SagB-type dehydrogenase domain protein; InterPro IPR000415:IPR020051; KEGG: dol:Dole_2124 hypothetical protein; PFAM: nitroreductase; SPTR: A8ZTZ5 Putative uncharacterized protein; TIGRFAM: SagB-type dehydrogenase domain; PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain.


ensembl_gene_id: Deba_0500
symbol: Deba_0500
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: lbf:LBF_4045 transglycosylase; SPTR: B0STQ0 Putative soluble lytic murein transglycosylase; putative SLT domain.


ensembl_gene_id: Deba_0501
symbol: Deba_0501
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300:IPR011330; KEGG: tro:trd_1935 glycosyl hydrolase, family 57; PFAM: glycoside hydrolase family 57; SPTR: B9L234 Glycosyl hydrolase, family 57; PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF3536).


ensembl_gene_id: Deba_0502
symbol: Deba_0502
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterProIPR004300:IPR015178:IPR015179:IPR011330:IPR 011013:IPR000602; KEGG: rba:RB2160 alpha-amylase; PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; PRIAM: 4-alpha-glucanotransferase; SPTR: Q7UWA6 Alpha-amylase; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926).


ensembl_gene_id: Deba_0503
symbol: Deba_0503
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000644:IPR000160; KEGG: drt:Dret_0176 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C8WZK3 Diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Deba_0505
symbol: Deba_0505
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006091:IPR006090:IPR009075:IPR009100:IPR 013764; KEGG: dal:Dalk_3085 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B8FBM2 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.


ensembl_gene_id: Deba_0506
symbol: Deba_0506
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_3084 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FBM1 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0507
symbol: Deba_0507
gene_biotype: protein_coding
description:
  Diguanylate cyclase and serine/threonine protein kinase with TPR repeats; InterProIPR000160:IPR001440:IPR013105:IPR006597:IPR 011717:IPR019734:IPR011990:IPR013026; KEGG: drt:Dret_2188 diguanylate cyclase and serine/threonine protein kinase with TPR repeats; PFAM: Tetratricopeptide TPR_2 repeat protein; GGDEF domain containing protein; TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_4; SMART: GGDEF domain containing protein; Tetratricopeptide repeat; SPTR: C8X4X5 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats; [...]


ensembl_gene_id: Deba_0508
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: Deba_0509
symbol: Deba_0509
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR000086:IPR015797:IPR020084; KEGG: rmr:Rmar_0039 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: D0MK35 NUDIX hydrolase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Deba_0510
symbol: Deba_0510
gene_biotype: protein_coding
description:
  CheC domain protein; COGs: COG1406 inhibitor of MCP methylation homolog of CheC; InterPro IPR007597; KEGG: dat:HRM2_37370 CheX2; PFAM: CheC domain protein; SPTR: C0QAL2 CheX2.


ensembl_gene_id: Deba_0511
symbol: Deba_0511
gene_biotype: protein_coding
description:
  Protein of unknown function YGGT; InterPro IPR003425; KEGG: pmx:PERMA_1227 YGGT family protein; PFAM: protein of unknown function YGGT; SPTR: A6DA20 YGGT family protein; PFAM: YGGT family.


ensembl_gene_id: Deba_0512
symbol: Deba_0512
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; InterPro IPR009875; KEGG: sat:SYN_02698 putative cytoplasmic protein; PFAM: type IV pilus assembly PilZ; SPTR: Q2LWK0 Hypothetical cytosolic protein; PFAM: PilZ domain.


ensembl_gene_id: Deba_0513
symbol: Deba_0513
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR019734:IPR013026; KEGG: hypothetical protein; SPTR: A0FJY8 Type I fatty acid synthase.


ensembl_gene_id: Deba_0514
symbol: Deba_0514
gene_biotype: protein_coding
description:
  Rhodanese domain protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: dat:HRM2_03660 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C0QGL1 Putative uncharacterized protein; PFAM: Rhodanese-like domain.


ensembl_gene_id: Deba_0515
symbol: Deba_0515
gene_biotype: protein_coding
description:
  Hydroxypyruvate reductase; COGs: COG2379 Putative glycerate kinase; InterPro IPR007835; KEGG: sus:Acid_0778 glycerate 2-kinase; PFAM: MOFRL domain protein; PRIAM: Hydroxypyruvate reductase; SPTR: Q02AY9 Glycerate 2-kinase; PFAM: MOFRL family.


ensembl_gene_id: Deba_0516
symbol: Deba_0516
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR003439:IPR013563:IPR003593:IPR010066:IPR 017871; KEGG: gau:GAU_0758 putative peptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: C1A6E0 Putative peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;  [...]


ensembl_gene_id: Deba_0517
symbol: Deba_0517
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterProIPR003439:IPR013563:IPR002696:IPR003593:IPR 010066:IPR017871; KEGG: sro:Sros_5910 peptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: B5GVG5 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; Belong [...]


ensembl_gene_id: Deba_0518
symbol: Deba_0518
gene_biotype: protein_coding
description:
  Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127:IPR006128; KEGG: dal:Dalk_1551 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: B8FAF3 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: Deba_0519
symbol: Deba_0519
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: lsa:LSA0016 chromosome partitioning ATPase; SPTR: A2AXF8 Putative mevalonate kinase.


ensembl_gene_id: Deba_0520
symbol: Deba_0520
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004090; KEGG: dal:Dalk_0574 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: B8FHJ1 Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0522
symbol: Deba_0522
gene_biotype: protein_coding
description:
  Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR013022; KEGG: sfu:Sfum_0023 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: A0LE74 Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel.


ensembl_gene_id: Deba_0525
symbol: Deba_0525
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dsa:Desal_2286 calcium-binding EF-hand-containing protein; SPTR: C6BWR2 Calcium-binding EF-hand-containing protein.


ensembl_gene_id: Deba_0526
symbol: Deba_0526
gene_biotype: protein_coding
description:
  COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: kol:Kole_1745 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: B9R0S1 Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Deba_0527
symbol: Deba_0527
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: dsa:Desal_2341 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: C6BX91 Secretion protein HlyD family protein.


ensembl_gene_id: Deba_0528
symbol: Deba_0528
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: dma:DMR_22930 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C4XSU2 Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_0529
symbol: Deba_0529
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR000412; KEGG: dma:DMR_22920 putative ABC transporter permease protein; PFAM: ABC-2 type transporter; SPTR: B4D6L5 ABC-2 type transporter; PFAM: ABC-2 type transporter.


ensembl_gene_id: Deba_0530
symbol: Deba_0530
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: similar to peroxisomal enoyl-coenzyme A hydratase-like protein; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: C9Y8M4 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_0531
symbol: Deba_0531
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: afw:Anae109_4101 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A7HHT3 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_0532
symbol: Deba_0532
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase (quinone); COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: ank:AnaeK_0029 NAD(P)H dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone); SPTR: B4UKI1 NAD(P)H dehydrogenase (Quinone); PFAM: Flavodoxin-like fold.


ensembl_gene_id: Deba_0533
symbol: Deba_0533
gene_biotype: protein_coding
description:
  Protein of unknown function DUF88; InterPro IPR002790; KEGG: rfr:Rfer_1542 hypothetical protein; PFAM: protein of unknown function DUF88; SPTR: Q21Y79 Putative uncharacterized protein; PFAM: Protein of unknown function DUF88.


ensembl_gene_id: Deba_0534
symbol: cysS
gene_biotype: protein_coding
description:
  COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR015803:IPR015273:IPR009080:IPR014729:IPR 002308; KEGG: sfu:Sfum_1634 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: A0LIR9 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Deba_0535
symbol: ispDF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: Deba_0536
symbol: Deba_0536
gene_biotype: protein_coding
description:
  Protein of unknown function DUF309; InterPro IPR005500; KEGG: dat:HRM2_21250 hypothetical protein; PFAM: protein of unknown function DUF309; SPTR: C0QDF9 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF309).


ensembl_gene_id: Deba_0537
symbol: Deba_0537
gene_biotype: protein_coding
description:
  COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020828:IPR020829:IPR020831:IPR016040:IPR 020832:IPR006424:IPR020830; KEGG: sfu:Sfum_1468 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: A0LIA5 Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehyd [...]


ensembl_gene_id: Deba_0538
symbol: Deba_0538
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: dde:Dde_1077 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Q313L8 Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0539
symbol: Deba_0539
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1313 Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating protein; InterPro IPR007197:IPR016431; KEGG: glo:Glov_2082 radical SAM; PFAM: Radical SAM domain protein; SPTR: B3E3H9 Radical SAM; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_0540
symbol: Deba_0540
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR013767:IPR000160:IPR001633:IPR000014:IPR 000700; KEGG: tmz:Tmz1t_3959 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); T [...]


ensembl_gene_id: Deba_0541
symbol: Deba_0541
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dvm:DvMF_1514 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: B8DLT6 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Deba_0542
symbol: Deba_0542
gene_biotype: protein_coding
description:
  Nickel transport complex, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: dal:Dalk_2736 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: B8FKQ6 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region.


ensembl_gene_id: Deba_0544
symbol: Deba_0544
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: Deba_0545
symbol: Deba_0545
gene_biotype: protein_coding
description:
  FeoA family protein; COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167:IPR008988; KEGG: dds:Ddes_0645 FeoA family protein; PFAM: FeoA family protein; SPTR: B8IYF8 FeoA family protein; PFAM: FeoA domain.


ensembl_gene_id: Deba_0546
symbol: Deba_0546
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR008250:IPR005834:IPR001757:IPR000695:IPR 006416:IPR018303:IPR000150; KEGG: dde:Dde_0489 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Q315V6 Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPa [...]


ensembl_gene_id: Deba_0552
symbol: Deba_0552
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR008250:IPR005834:IPR001757:IPR006416:IPR 018303:IPR000150; KEGG: dde:Dde_0495 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Q315V0 Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type [...]


ensembl_gene_id: Deba_0553
symbol: Deba_0553
gene_biotype: protein_coding
description:
  FeoA family protein; InterPro IPR007167; KEGG: dsa:Desal_0100 FeoA family protein; PFAM: FeoA family protein; SPTR: C6BV34 FeoA family protein; PFAM: FeoA domain.


ensembl_gene_id: Deba_0554
symbol: Deba_0554
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004090; KEGG: dal:Dalk_0094 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: B8FKI9 Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0555
symbol: Deba_0555
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: gbm:Gbem_3415 Polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: B5EBB6 Polyprenyl synthetase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Deba_0556
symbol: Deba_0556
gene_biotype: protein_coding
description:
  Excinuclease ABC C subunit domain protein; InterPro IPR000305; KEGG: cyh:Cyan8802_3969 group I intron endonuclease; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: C7QQW2 Group I intron endonuclease; PFAM: GIY-YIG catalytic domain; TIGRFAM: group I intron endonuclease.


ensembl_gene_id: Deba_0557
symbol: Deba_0557
gene_biotype: protein_coding
description:
  COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: pca:Pcar_2939 carbonic anhydrase; PFAM: carbonic anhydrase; SPTR: Q3A0D3 Carbonic anhydrase; PFAM: Carbonic anhydrase.


ensembl_gene_id: Deba_0558
symbol: Deba_0558
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR002731:IPR008275; KEGG: adg:Adeg_1706 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; PRIAM: Benzoyl-CoA reductase; SPTR: C6PAT9 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: Deba_0559
symbol: Deba_0559
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: afu:AF1958 2-hydroxyglutaryl-CoA dehydratase, subunit alpha (HgdA); PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; PRIAM: Benzoyl-CoA reductase; SPTR: O28321 2-hydroxyglutaryl-CoA dehydratase, subunit alpha (HgdA); PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Deba_0560
symbol: Deba_0560
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: dal:Dalk_0249 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: B8F8S6 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Deba_0562
symbol: Deba_0562
gene_biotype: protein_coding
description:
  InterPro IPR004360; KEGG: dma:DMR_03790 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C4XHA2 Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.


ensembl_gene_id: Deba_0564
symbol: Deba_0564
gene_biotype: protein_coding
description:
  COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: drt:Dret_0235 nitrate reductase gamma subunit; PFAM: Nitrate reductase gamma subunit; SPTR: C8WZR2 Membrane-bound menaquinol oxidoreductase, cytochrome b subunit; PFAM: Nitrate reductase gamma subunit.


ensembl_gene_id: Deba_0565
symbol: Deba_0565
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin, iron-sulfur binding protein; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR009051:IPR012285:IPR017896:IPR017900; KEGG: mta:Moth_1606 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: Q2RI27 4Fe-4S ferredoxin, iron-sulfur binding.


ensembl_gene_id: Deba_0566
symbol: Deba_0566
gene_biotype: protein_coding
description:
  InterPro IPR011031; KEGG: sfu:Sfum_1148 cytochrome c family protein; SPTR: A0LHD9 Cytochrome c family protein.


ensembl_gene_id: Deba_0567
symbol: Deba_0567
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR001450:IPR006311:IPR017909:IPR017896:IPR 017900; KEGG: dal:Dalk_0608 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FJN5 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Deba_0568
symbol: Deba_0568
gene_biotype: protein_coding
description:
  COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: dol:Dole_0454 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: A8ZTK0 Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD.


ensembl_gene_id: Deba_0569
symbol: Deba_0569
gene_biotype: protein_coding
description:
  Protein of unknown function DUF296; COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: plt:Plut_1663 DNA-binding protein; PFAM: protein of unknown function DUF296; SPTR: Q3B2B4 DNA-binding proteins with PD1-like DNA-binding motif; PFAM: Domain of unknown function (DUF296).


ensembl_gene_id: Deba_0570
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: Deba_0571
symbol: Deba_0571
gene_biotype: protein_coding
description:
  Bile acid:sodium symporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: SORBIDRAFT_09g028950; hypothetical protein; PFAM: Bile acid:sodium symporter; SPTR: A6DUG7 Putative uncharacterized protein; PFAM: Sodium Bile acid symporter family.


ensembl_gene_id: Deba_0572
symbol: Deba_0572
gene_biotype: protein_coding
description:
  Peptidase M20; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650:IPR001261; KEGG: mrd:Mrad2831_2432 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: B1LZ06 Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.


ensembl_gene_id: Deba_0573
symbol: Deba_0573
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: bbt:BBta_5735 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: A5ENE3 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_0574
symbol: Deba_0574
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tnp:Tnap_1048 formate--tetrahydrofolate ligase; SPTR: B1FY89 Putative uncharacterized protein.


ensembl_gene_id: Deba_0575
symbol: Deba_0575
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR009100:IPR 009075:IPR013786:IPR013764:IPR006089; KEGG: dal:Dalk_2663 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B8FIW4 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_0576
symbol: Deba_0576
gene_biotype: protein_coding
description:
  Diheme cytochrome c; InterPro IPR018588:IPR009056; KEGG: dde:Dde_1896 putative lipoprotein; PFAM: Dihaem cytochrome c; SPTR: Q310F3 Lipoprotein, putative; PFAM: Dihaem cytochrome c.


ensembl_gene_id: Deba_0577
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR015424:IPR015421:IPR004639; KEGG: pca:Pcar_0266 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: Q3A7W5 Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.


ensembl_gene_id: Deba_0578
symbol: Deba_0578
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR011991; KEGG: dal:Dalk_4278 putative transcriptional regulator, AsnC family; SPTR: B8FMC0 Putative transcriptional regulator, AsnC family.


ensembl_gene_id: Deba_0579
symbol: Deba_0579
gene_biotype: protein_coding
description:
  Formyl transferase domain protein; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376; KEGG: sss:SSUSC84_0029 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: A6PR94 Putative uncharacterized protein; PFAM: Formyl transferase.


ensembl_gene_id: Deba_0580
symbol: tadA
gene_biotype: protein_coding
description:
  CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Deba_0581
symbol: Deba_0581
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR018486:IPR020845; KEGG: dal:Dalk_0694 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FJX1 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0582
symbol: Deba_0582
gene_biotype: protein_coding
description:
  Rubrerythrin; InterPro IPR003251:IPR009078:IPR012347; KEGG: dal:Dalk_3005 rubrerythrin; PFAM: Rubrerythrin; SPTR: B8FL60 Rubrerythrin; PFAM: Rubrerythrin.


ensembl_gene_id: Deba_0583
symbol: Deba_0583
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: pca:Pcar_0052 putative methyl-accepting chemotaxis protein (MCP); PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: C1SLV7 Methyl-accepting chemotaxis protein; PFAM: EAL-domain associated signalling protein domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0584
symbol: speE
gene_biotype: protein_coding
description:
  Spermine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: Deba_0585
symbol: Deba_0585
gene_biotype: protein_coding
description:
  COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: dol:Dole_1973 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A8ZT94 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0586
symbol: Deba_0586
gene_biotype: protein_coding
description:
  COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: dol:Dole_1974 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily; SPTR: A8ZT95 Histone deacetylase superfamily; PFAM: Histone deacetylase domain.


ensembl_gene_id: Deba_0587
symbol: Deba_0587
gene_biotype: protein_coding
description:
  Cl- channel voltage-gated family protein; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644:IPR014743; KEGG: sfu:Sfum_2352 Cl-channel, voltage-gated family protein; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: A0LKT1 Cl-channel, voltage-gated family protein; PFAM: CBS domain; Voltage gated chloride channel.


ensembl_gene_id: Deba_0588
symbol: Deba_0588
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; InterPro IPR001440:IPR019734:IPR011990:IPR013026; KEGG: rca:Rcas_0215 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: A7NFW7 Tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Deba_0589
symbol: Deba_0589
gene_biotype: protein_coding
description:
  Protein of unknown function DUF330; InterPro IPR005586; KEGG: dol:Dole_1014 ABC-type transport system auxiliary component-like protein; PFAM: protein of unknown function DUF330; SPTR: A8ZWW8 ABC-type transport system auxiliary component-like protein; PFAM: Protein of unknown function (DUF330).


ensembl_gene_id: Deba_0590
symbol: Deba_0590
gene_biotype: protein_coding
description:
  Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: dol:Dole_1015 hypothetical protein; PFAM: Mammalian cell entry related domain protein; SPTR: A8ZWW9 Mammalian cell entry related domain protein; PFAM: mce related protein.


ensembl_gene_id: Deba_0591
symbol: Deba_0591
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: pca:Pcar_2750 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9ZQV3 ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_0592
symbol: Deba_0592
gene_biotype: protein_coding
description:
  Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR002645:IPR003453; KEGG: dba:Dbac_0468 protein of unknown function DUF140; PFAM: protein of unknown function DUF140; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C7LVW4 Putative uncharacterized protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.


ensembl_gene_id: Deba_0593
symbol: Deba_0593
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: asa:ASA_4345 sensory histidine kinase CreC; SPTR: Q0UKW3 Putative uncharacterized protein.


ensembl_gene_id: Deba_0594
symbol: Deba_0594
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: sml:Smlt2170 putative calcineurin phosphoesterase; PFAM: metallophosphoesterase; SPTR: B2FPM6 Putative calcineurin phosphoesterase; PFAM: Calcineurin-like phosphoesterase.


ensembl_gene_id: Deba_0595
symbol: Deba_0595
gene_biotype: protein_coding
description:
  Protein-disulfide reductase; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834:IPR012336:IPR012335:IPR017936; KEGG: sfu:Sfum_2885 cytochrome c biogenesis protein, transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; PRIAM: Protein-disulfide reductase; SPTR: C0GMD4 Cytochrome c biogenesis protein transmembrane region; PFAM: Thioredoxin; Cytochrome C biogenesis protein transmembrane region.


ensembl_gene_id: Deba_0596
symbol: Deba_0596
gene_biotype: protein_coding
description:
  Lytic transglycosylase catalytic; InterPro IPR008258:IPR018392:IPR002482; KEGG: pca:Pcar_2042 membrane-bound lytic murein transglycosylase D precursor; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Q3A2X4 Membrane-bound lytic murein transglycosylase D; PFAM: Transglycosylase SLT domain; LysM domain.


ensembl_gene_id: Deba_0597
symbol: Deba_0597
gene_biotype: protein_coding
description:
  COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR013105:IPR011717:IPR001440:IPR 011006:IPR019734:IPR011990:IPR013026:IPR005829; KEGG: hch:HCH_04305 FOG: CheY-like receiver; PFAM: response regulator receiver; Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; TPR repeat-containing protein; SMART: response regulator receiver; Tetratricopeptide repeat; SPTR: A6F3F5 CheY-like receiver protein; PFAM: Response regulator receiver domain; Tetratricopeptide repeat.


ensembl_gene_id: Deba_0598
symbol: Deba_0598
gene_biotype: protein_coding
description:
  GAF sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR003018:IPR003661:IPR003594:IPR004358:IPR 005467; KEGG: dal:Dalk_2141 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SPTR: Q1NPH4 Sensor protein; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_0599
symbol: Deba_0599
gene_biotype: protein_coding
description:
  Protein of unknown function DUF88; COGs: COG1432 conserved hypothetical protein; InterPro IPR002790; KEGG: hmo:HM1_0800 hypothetical protein; PFAM: protein of unknown function DUF88; SPTR: B0TB28 Putative uncharacterized protein; PFAM: Protein of unknown function DUF88.


ensembl_gene_id: Deba_0600
symbol: Deba_0600
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: dal:Dalk_3435 beta-lactamase domain protein; SPTR: B8FLH7 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0601
symbol: Deba_0601
gene_biotype: protein_coding
description:
  PHP domain protein; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013:IPR016195:IPR003141; KEGG: chy:CHY_2227 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: Q3A9Z4 PHP domain protein; PFAM: PHP domain.


ensembl_gene_id: Deba_0602
symbol: Deba_0602
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: sat:SYN_01292 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q2LX20 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0603
symbol: Deba_0603
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: dal:Dalk_2384 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C8R0H6 ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_0604
symbol: Deba_0604
gene_biotype: protein_coding
description:
  ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: noc:Noc_2421 ABC Mn2+/Zn2+ transporter,inner membrane subunit; PFAM: ABC-3 protein; SPTR: C5SCP6 ABC-3 protein; PFAM: ABC 3 transport family.


ensembl_gene_id: Deba_0605
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: Deba_0606
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: Deba_0607
symbol: Deba_0607
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: Deba_0608
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: Deba_0609
symbol: Deba_0609
gene_biotype: protein_coding
description:
  Potassium uptake protein, TrkH family; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: Deba_0610
symbol: Deba_0610
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037:IPR016040:IPR006036; KEGG: dol:Dole_3218 potassium transporter peripheral membrane component; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: A9A0A2 TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain.


ensembl_gene_id: Deba_0611
symbol: Deba_0611
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_2921 putative mannosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q1D891 Putative mannosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0612
symbol: Deba_0612
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_2920 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Q1D892 Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0613
symbol: Deba_0613
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rrs:RoseRS_3332 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: A5UYJ0 Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0614
symbol: Deba_0614
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: glo:Glov_2754 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: B3E7F0 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0615
symbol: Deba_0615
gene_biotype: protein_coding
description:
  Membrane-bound metal-dependent hydrolase; InterPro IPR007404; KEGG: hch:HCH_06173 hypothetical protein; PFAM: membrane-bound metal-dependent hydrolase; SPTR: A0YXX1 Putative uncharacterized protein; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457).


ensembl_gene_id: Deba_0616
symbol: Deba_0616
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gbm:Gbem_3449 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B5EBF0 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0617
symbol: Deba_0617
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: amr:AM1_2706 NAD-dependent epimerase/dehydratase, putative; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B0C822 NAD-dependent epimerase/dehydratase, putative; PFAM: NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Deba_0618
symbol: Deba_0618
gene_biotype: protein_coding
description:
  KEGG: glo:Glov_0605 hypothetical protein; SPTR: B3E3C0 Putative uncharacterized protein; PFAM: Prolipoprotein diacylglyceryl transferase.


ensembl_gene_id: Deba_0619
symbol: Deba_0619
gene_biotype: protein_coding
description:
  COGs: COG0688 Phosphatidylserine decarboxylase; InterPro IPR003817; KEGG: gur:Gura_1505 phosphatidylserine decarboxylase-related; PFAM: phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: A5GE49 Phosphatidylserine decarboxylase-related; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; Belongs to the phosphatidylserine decarboxylase family.


ensembl_gene_id: Deba_0620
symbol: Deba_0620
gene_biotype: protein_coding
description:
  KEGG: ppd:Ppro_2684 hypothetical protein; SPTR: A1ASG7 Putative uncharacterized protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.


ensembl_gene_id: Deba_0621
symbol: Deba_0621
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: dal:Dalk_3066 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: B8FBK3 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Deba_0622
symbol: Deba_0622
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: dps:DP1699 transcription regulator; PFAM: regulatory protein TetR; SPTR: Q1JVZ2 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_0623
symbol: Deba_0623
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rmr:Rmar_0901 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: D0MH10 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Deba_0624
symbol: Deba_0624
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: hoh:Hoch_6213 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: D0LMK0 Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Deba_0625
symbol: Deba_0625
gene_biotype: protein_coding
description:
  Transcriptional regulator, NifA subfamily, Fis Family; COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterProIPR003018:IPR003593:IPR002078:IPR009057:IPR 020441:IPR002197; KEGG: sfu:Sfum_1010 NifA subfamily transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; SPTR: C0GSN4 Transcriptional regulator, NifA subfamily, Fis Family; PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRF [...]


ensembl_gene_id: Deba_0626
symbol: Deba_0626
gene_biotype: protein_coding
description:
  Vinylacetyl-CoA Delta-isomerase; COGs: COG2368 Aromatic ring hydroxylase; InterPro IPR006091:IPR013764:IPR004925; KEGG: cbe:Cbei_2100 vinylacetyl-CoA delta-isomerase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; PRIAM: Vinylacetyl-CoA Delta-isomerase; SPTR: A6LV87 Vinylacetyl-CoA Delta-isomerase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase N terminal; 4-hydroxyphenylacetate 3-hydroxylase C terminal.


ensembl_gene_id: Deba_0627
symbol: Deba_0627
gene_biotype: protein_coding
description:
  Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR017896:IPR012285:IPR009051:IPR004017:IPR 017900:IPR017969; KEGG: sfu:Sfum_2146 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A0LK76 Putative uncharacterized protein; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_0628
symbol: Deba_0628
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR013830:IPR003006; KEGG: lhk:LHK_02194 probable oxidoreductase; SPTR: B4D6B2 Putative uncharacterized protein.


ensembl_gene_id: Deba_0629
symbol: Deba_0629
gene_biotype: protein_coding
description:
  Membrane bound O-acyl transferase MBOAT family protein; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299:IPR020726; KEGG: pdi:BDI_1486 alginate O-acetylation protein, putative alginate O-acetyltransferase; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: B4D6B3 Membrane bound O-acyl transferase MBOAT family protein; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: Deba_0630
symbol: Deba_0630
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR003018:IPR003661:IPR003594:IPR 001789:IPR005467:IPR011006:IPR009082:IPR004358:IPR013656:I PR013767; KEGG: sfu:Sfum_3740 putative PAS/PAC sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; GAF domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; re [...]


ensembl_gene_id: Deba_0631
symbol: Deba_0631
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: pth:PTH_0666 signaling protein; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: A5D4I7 Hypothetical signaling protein; PFAM: EAL domain.


ensembl_gene_id: Deba_0632
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Deba_0633
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Deba_0634
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'phosphoribosyl)anthranilate isomerase (PRAI); COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR013785:IPR011060:IPR001240; KEGG: gme:Gmet_2492 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: Q39SQ9 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.


ensembl_gene_id: Deba_0635
symbol: trpC
gene_biotype: protein_coding
description:
  COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013785:IPR011060:IPR013798:IPR001468; KEGG: afw:Anae109_0373 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: A7H792 Indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.


ensembl_gene_id: Deba_0636
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Deba_0637
symbol: Deba_0637
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR001647:IPR012287:IPR009057; KEGG: dal:Dalk_3086 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B8FBM3 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_0638
symbol: Deba_0638
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 001789:IPR005467:IPR000700:IPR003660:IPR011006:IPR009082:I PR004358:IPR004010:IPR013767; KEGG: drt:Dret_0936 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; Cache domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat [...]


ensembl_gene_id: Deba_0639
symbol: Deba_0639
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709:IPR001828; KEGG: geo:Geob_3442 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: B9M5M6 Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Deba_0640
symbol: Deba_0640
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: app:CAP2UW1_2211 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: C7RP21 Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Deba_0643
symbol: Deba_0643
gene_biotype: protein_coding
description:
  FeoA family protein; COGs: COG1918 Fe2+ transport system protein A; InterPro IPR008988:IPR007167; KEGG: drt:Dret_0317 FeoA family protein; PFAM: FeoA family protein; SPTR: C8WZZ4 FeoA family protein; PFAM: FeoA domain.


ensembl_gene_id: Deba_0644
symbol: Deba_0644
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dsa:Desal_2695 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: C6BZB2 TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7.


ensembl_gene_id: Deba_0645
symbol: Deba_0645
gene_biotype: protein_coding
description:
  KEGG: dol:Dole_2002 tripartite ATP-independent periplasmic transporter DctQ; SPTR: A8ZTC3 Tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.


ensembl_gene_id: Deba_0646
symbol: Deba_0646
gene_biotype: protein_coding
description:
  TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: dat:HRM2_35000 TRAP-type C4-dicarboxylate transport system, large permease component; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C0Q966 TRAP-type C4-dicarboxylate transport system, large permease component; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.


ensembl_gene_id: Deba_0649
symbol: Deba_0649
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: 3110006E14Rik; RIKEN cDNA 3110006E14 gene; K10582 ubiquitin-conjugating enzyme E2 Q; SPTR: A7M8L6 Major ampullate spidroin 1 (Fragment).


ensembl_gene_id: Deba_0650
symbol: Deba_0650
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR013704:IPR007197; KEGG: dvu:DVU2413 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q729D8 Radical SAM domain protein; manually curated; PFAM: Radical SAM superfamily; Radical SAM N-terminal.


ensembl_gene_id: Deba_0652
symbol: Deba_0652
gene_biotype: protein_coding
description:
  COGs: COG0015 Adenylosuccinate lyase; InterProIPR004769:IPR008948:IPR000362:IPR003031:IPR 019468:IPR020557; KEGG: dal:Dalk_1188 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: B8F9E5 Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Deba_0653
symbol: Deba_0653
gene_biotype: protein_coding
description:
  Protein of unknown function DUF401; COGs: COG1906 conserved hypothetical protein; InterPro IPR007294; KEGG: dol:Dole_1082 hypothetical protein; PFAM: protein of unknown function DUF401; SPTR: A8ZX33 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF401); TIGRFAM: converved hypothetical integral membrane protein.


ensembl_gene_id: Deba_0655
symbol: Deba_0655
gene_biotype: protein_coding
description:
  InterPro IPR013247; KEGG: dal:Dalk_4331 SH3 type 3 domain protein; PFAM: SH3 type 3 domain protein; SPTR: B8FMH3 SH3 type 3 domain protein; PFAM: Bacterial SH3 domain.


ensembl_gene_id: Deba_0656
symbol: Deba_0656
gene_biotype: protein_coding
description:
  Response regulator receiver modulated metal dependent phosphohydrolase; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789:IPR003607:IPR011006:IPR006674; KEGG: tye:THEYE_A0181 response regulator; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; SPTR: C6MU13 Response regulator receiver modulated metal dependent phosphohydrolase; PFAM: HD domain; Response regulator receiver domain.


ensembl_gene_id: Deba_0657
symbol: Deba_0657
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR018202:IPR019775; KEGG: azc:AZC_3620 hypothetical protein; SPTR: B4V1D3 Superoxide dismutase.


ensembl_gene_id: Deba_0658
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: Deba_0659
symbol: Deba_0659
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015421:IPR015424:IPR000653; KEGG: dps:DP1941 aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C8R1K8 Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Deba_0660
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: Deba_0661
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Deba_0662
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Deba_0663
symbol: Deba_0663
gene_biotype: protein_coding
description:
  COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779; KEGG: sml:Smlt1304 putative 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: B2FTF6 Putative 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase family.


ensembl_gene_id: Deba_0664
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: Deba_0665
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: Deba_0666
symbol: Deba_0666
gene_biotype: protein_coding
description:
  InterPro IPR000551:IPR009061; KEGG: sfu:Sfum_0360 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: A0LF58 Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein.


ensembl_gene_id: Deba_0667
symbol: Deba_0667
gene_biotype: protein_coding
description:
  KEGG: hsm:HSM_1696 hypothetical protein; SPTR: B0UVR5 Haemophilus-specific protein, uncharacterized.


ensembl_gene_id: Deba_0668
symbol: Deba_0668
gene_biotype: protein_coding
description:
  Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000160:IPR000700:IPR013767:IPR 006089; KEGG: dsa:Desal_3020 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; SPTR: Q2BH87 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) (Fragment); TIGRFAM: diguanylate cyclase; PAS sensor protein; manually curated; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Deba_0669
symbol: Deba_0669
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; COGs: COG2202 FOG: PAS/PAC domain; InterProIPR000014:IPR001610:IPR000700:IPR009082:IPR 013655:IPR013767; KEGG: dal:Dalk_3642 PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: PAS fold domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; SPTR: B8FGV0 PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Deba_0670
symbol: Deba_0670
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753:IPR018376; KEGG: acr:Acry_1715 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: A5FZ87 Enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_0671
symbol: Deba_0671
gene_biotype: protein_coding
description:
  Peptidoglycan-binding lysin domain protein; InterPro IPR002482:IPR018392; KEGG: rmr:Rmar_0215 lytic transglycosylase catalytic; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: D0MD11 Lytic transglycosylase catalytic; PFAM: LysM domain.


ensembl_gene_id: Deba_0672
symbol: Deba_0672
gene_biotype: protein_coding
description:
  Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674; KEGG: chl:Chy400_2505 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SPTR: Q1NUR4 Polynucleotide adenylyltransferase region:Metal-dependent phosphohydrolase, HD subdomain; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Deba_0674
symbol: Deba_0674
gene_biotype: protein_coding
description:
  Putative enzyme (3.4.-); COGs: COG1073 Hydrolase of the alpha/beta superfamily; KEGG: pca:Pcar_2424 putative enzyme (3.4.-); SPTR: Q3A1U4 Putative enzyme (3.4.-); PFAM: Prolyl oligopeptidase family; Putative lysophospholipase.


ensembl_gene_id: Deba_0676
symbol: Deba_0676
gene_biotype: protein_coding
description:
  InterPro IPR010753; KEGG: dal:Dalk_0245 protein of unknown function DUF1330; PFAM: protein of unknown function DUF1330; SPTR: B8FMT7 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF1330).


ensembl_gene_id: Deba_0677
symbol: Deba_0677
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789:IPR002545:IPR011006; KEGG: dal:Dalk_0296 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: response regulator receiver; CheW domain protein; SPTR: C8QZE4 Response regulator receiver modulated CheW protein; PFAM: CheW-like domain; Response regulator receiver domain.


ensembl_gene_id: Deba_0678
symbol: Deba_0678
gene_biotype: protein_coding
description:
  Protein of unknown function DUF169; COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: dal:Dalk_1633 protein of unknown function DUF169; PFAM: protein of unknown function DUF169; SPTR: B8FAN5 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043.


ensembl_gene_id: Deba_0681
symbol: Deba_0681
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; InterProIPR000014:IPR001610:IPR000700:IPR013656:IPR 013655; KEGG: dal:Dalk_1610 putative PAS/PAC sensor protein; PFAM: PAS fold-4 domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; SPTR: B8FAL2 Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Deba_0682
symbol: Deba_0682
gene_biotype: protein_coding
description:
  CoA-binding domain protein; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterProIPR011761:IPR016040:IPR016102:IPR013650:IPR 003781; KEGG: dat:HRM2_02900 hypothetical protein; PFAM: CoA-binding domain protein; ATP-grasp domain protein; SPTR: C0QFL6 Putative uncharacterized protein; PFAM: CoA binding domain.


ensembl_gene_id: Deba_0684
symbol: Deba_0684
gene_biotype: protein_coding
description:
  COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043; KEGG: mem:Memar_0808 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: A3CTP1 Xanthine/uracil/vitamin C permease; PFAM: Permease family.


ensembl_gene_id: Deba_0685
symbol: Deba_0685
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase; InterPro IPR000868; KEGG: aba:Acid345_0669 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Q1ITX6 Isochorismatase hydrolase; PFAM: Isochorismatase family.


ensembl_gene_id: Deba_0686
symbol: Deba_0686
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004090; KEGG: vap:Vapar_4189 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C5CXU6 Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0687
symbol: Deba_0687
gene_biotype: protein_coding
description:
  Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: adg:Adeg_0325 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: C9RB61 Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel.


ensembl_gene_id: Deba_0688
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: Deba_0689
symbol: Deba_0689
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.


ensembl_gene_id: Deba_0690
symbol: Deba_0690
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; InterPro IPR017515:IPR004360; KEGG: sfu:Sfum_0455 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A0LFF3 Methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.


ensembl_gene_id: Deba_0691
symbol: Deba_0691
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR001387:IPR011051:IPR010982:IPR013096; KEGG: sfu:Sfum_4068 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: A0LQN1 Transcriptional regulator, XRE family; PFAM: Cupin domain; Helix-turn-helix.


ensembl_gene_id: Deba_0692
symbol: Deba_0692
gene_biotype: protein_coding
description:
  COGs: COG0069 Glutamate synthase domain 2; InterPro IPR013785:IPR002932; KEGG: ate:Athe_2034 ferredoxin-dependent glutamate synthase; PFAM: ferredoxin-dependent glutamate synthase; SPTR: B9MLC1 Ferredoxin-dependent glutamate synthase; PFAM: Conserved region in glutamate synthase.


ensembl_gene_id: Deba_0693
symbol: Deba_0693
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR004099:IPR016156:IPR013027:IPR000815:IPR 012999; KEGG: rxy:Rxyl_1767 mercuric reductase MerA; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: B4D639 Pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.


ensembl_gene_id: Deba_0694
symbol: Deba_0694
gene_biotype: protein_coding
description:
  Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550; KEGG: dps:DP2605 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; SPTR: Q6AJZ2 Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21.


ensembl_gene_id: Deba_0695
symbol: Deba_0695
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: rha:RHA1_ro03772 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: B5HUR7 Alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold.


ensembl_gene_id: Deba_0696
symbol: Deba_0696
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterProIPR010099:IPR016040:IPR001509:IPR013549:IPR 003006; KEGG: dal:Dalk_2593 domain of unknown function DUF1731; PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; SPTR: Q1NNH6 Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777.


ensembl_gene_id: Deba_0697
symbol: Deba_0697
gene_biotype: protein_coding
description:
  COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR012833; KEGG: tai:Taci_0633 anaerobic ribonucleoside-triphosphate reductase; SPTR: D1B9B6 Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase.


ensembl_gene_id: Deba_0698
symbol: Deba_0698
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ava:Ava_3599 FAD dependent oxidoreductase; SPTR: Q3M731 FAD dependent oxidoreductase.


ensembl_gene_id: Deba_0699
symbol: Deba_0699
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012840:IPR007197; KEGG: pvi:Cvib_0808 anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; SPTR: Q1PZG6 Similar to ribonucleoside triphosphate reductase activating protein NrdG; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein.


ensembl_gene_id: Deba_0700
symbol: Deba_0700
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dge:Dgeo_0876 tetratricopeptide TPR_2; SPTR: Q1J006 P-loop ATPase, LuxR family containing TPR repeats.


ensembl_gene_id: Deba_0702
symbol: Deba_0702
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: dvm:DvMF_0135 haloacid dehalogenase domain protein hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: B8DNN9 Haloacid dehalogenase domain protein hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfami [...]


ensembl_gene_id: Deba_0703
symbol: Deba_0703
gene_biotype: protein_coding
description:
  Molybdopterin binding domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Deba_0704
symbol: Deba_0704
gene_biotype: protein_coding
description:
  COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: aba:Acid345_0503 formylmethanofuran dehydrogenase, subunit E; PFAM: formylmethanofuran dehydrogenase subunit E region; SPTR: Q1IUE2 Formylmethanofuran dehydrogenase, subunit E; PFAM: FmdE, Molybdenum formylmethanofuran dehydrogenase operon.


ensembl_gene_id: Deba_0705
symbol: Deba_0705
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216:IPR017441; KEGG: dol:Dole_1525 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A8ZZS9 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_0707
symbol: Deba_0707
gene_biotype: protein_coding
description:
  SNARE associated Golgi protein-related protein; COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: dal:Dalk_0616 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: B8FJP3 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein.


ensembl_gene_id: Deba_0708
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.


ensembl_gene_id: Deba_0709
symbol: Deba_0709
gene_biotype: protein_coding
description:
  COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670:IPR018211; KEGG: tai:Taci_1279 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Q1NLZ5 Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase.


ensembl_gene_id: Deba_0710
symbol: Deba_0710
gene_biotype: protein_coding
description:
  COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: mhu:Mhun_1561 acetyl-CoA hydrolase/transferase; PFAM: acetyl-CoA hydrolase/transferase; SPTR: Q2FRF0 Acetyl-CoA hydrolase/transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.


ensembl_gene_id: Deba_0711
symbol: Deba_0711
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR001958:IPR011701:IPR005829; KEGG: drt:Dret_2117 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C8X4C7 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Deba_0712
symbol: Deba_0712
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bav:BAV2236 lipopolysaccharide core biosynthesis glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Q2KYR6 Lipopolysaccharide core biosynthesis glycosyl transferase; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0713
symbol: Deba_0713
gene_biotype: protein_coding
description:
  COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: sco:SCO2710 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Q9KYG2 Putative polysaccharide deacetylase; PFAM: Polysaccharide deacetylase.


ensembl_gene_id: Deba_0714
symbol: Deba_0714
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nam:NAMH_1720 putative WalR protein; PFAM: glycosyl transferase group 1; SPTR: B9L6W2 Putative WalR protein; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0715
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Deba_0716
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Deba_0717
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: Deba_0718
symbol: Deba_0718
gene_biotype: protein_coding
description:
  InterPro IPR002781; KEGG: dal:Dalk_2526 protein of unknown function DUF81; PFAM: protein of unknown function DUF81; SPTR: B8FFF9 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE.


ensembl_gene_id: Deba_0721
symbol: Deba_0721
gene_biotype: protein_coding
description:
  COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterProIPR015421:IPR015422:IPR015424:IPR000192:IPR 020578; KEGG: tye:THEYE_A0936 soluble hydrogenase 42 kDa subunit; PFAM: aminotransferase class V; SPTR: A3EWA6 Aminotransferase, class V; PFAM: Aminotransferase class-V.


ensembl_gene_id: Deba_0722
symbol: Deba_0722
gene_biotype: protein_coding
description:
  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006139:IPR006140; KEGG: dal:Dalk_3379 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: B8FLC2 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase.


ensembl_gene_id: Deba_0723
symbol: Deba_0723
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1844; InterPro IPR014995; KEGG: sfu:Sfum_3650 hypothetical protein; PFAM: Domain of unknown function DUF1844; SPTR: A0LPG8 Conserved hypothetical cytosolic protein; PFAM: Domain of unknown function (DUF1844).


ensembl_gene_id: Deba_0724
symbol: Deba_0724
gene_biotype: protein_coding
description:
  Protease Do; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterProIPR011782:IPR001478:IPR009003:IPR001940:IPR 001254; KEGG: gme:Gmet_1014 peptidase S1C, Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Q39WW8 Peptidase S1C, Do; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.


ensembl_gene_id: Deba_0725
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritolkinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: Deba_0727
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Deba_0728
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: Deba_0729
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Deba_0730
symbol: hppA
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: Deba_0731
symbol: Deba_0731
gene_biotype: protein_coding
description:
  COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: dal:Dalk_3372 transcriptional regulator, CarD family; PFAM: transcription factor CarD; SPTR: B8FLB5 Transcriptional regulator, CarD family; PFAM: CarD-like/TRCF domain.


ensembl_gene_id: Deba_0732
symbol: Deba_0732
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Deba_0733
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Deba_0734
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Deba_0736
symbol: Deba_0736
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1385; COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: dma:DMR_31290 hypothetical membrane protein; PFAM: protein of unknown function DUF1385; SPTR: C4XIQ2 Hypothetical membrane protein; PFAM: Protein of unknown function (DUF1385).


ensembl_gene_id: Deba_0737
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Deba_0738
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Deba_0739
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Deba_0740
symbol: rpsB
gene_biotype: protein_coding
description:
  COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: gur:Gura_3733 30S ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: A5G7W8 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: Deba_0741
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Deba_0743
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Deba_0744
symbol: Deba_0744
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: Deba_0745
symbol: Deba_0745
gene_biotype: protein_coding
description:
  COGs: COG4589 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: bgl:bglu_1g12770 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: Q1NXW7 Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family; Belongs to the CDS family.


ensembl_gene_id: Deba_0746
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: Deba_0747
symbol: Deba_0747
gene_biotype: protein_coding
description:
  Membrane-associated zinc metalloprotease; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387:IPR001478:IPR008915; KEGG: dol:Dole_0481 putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8ZTM7 Putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.


ensembl_gene_id: Deba_0748
symbol: Deba_0748
gene_biotype: protein_coding
description:
  Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: dps:DP1162 glycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; SPTR: Q6AP33 Related to glycoprotein endopeptidase; PFAM: Glycoprotease family.


ensembl_gene_id: Deba_0749
symbol: Deba_0749
gene_biotype: protein_coding
description:
  Protein of unknown function DUF541; COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: pde:Pden_1932 hypothetical protein; PFAM: protein of unknown function DUF541; SPTR: Q1N8P4 Outer membrane protein; PFAM: Protein of unknown function (DUF541).


ensembl_gene_id: Deba_0751
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: Deba_0752
symbol: Deba_0752
gene_biotype: protein_coding
description:
  COGs: COG1183 Phosphatidylserine synthase; InterPro IPR004533:IPR000462; KEGG: glo:Glov_2499 CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: B3E5X2 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Deba_0753
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: Deba_0754
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Deba_0755
symbol: Deba_0755
gene_biotype: protein_coding
description:
  Methyltransferase; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398:IPR016065:IPR002052; KEGG: scl:sce8059 putative methylase; PFAM: Protein of unknown function methylase putative; SPTR: A9FHL8 Putative methylase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family.


ensembl_gene_id: Deba_0756
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: Deba_0757
symbol: Deba_0757
gene_biotype: protein_coding
description:
  AMMECR1 domain protein; COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: sat:SYN_00073 putative cytoplasmic protein; PFAM: AMMECR1 domain protein; SPTR: Q2LQ75 Hypothetical cytosolic protein; PFAM: AMMECR1; TIGRFAM: conserved hypothetical protein TIGR00296.


ensembl_gene_id: Deba_0758
symbol: Deba_0758
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086:IPR015797:IPR020476:IPR020084; KEGG: gme:Gmet_0988 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: Q39WZ4 NUDIX hydrolase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Deba_0760
symbol: Deba_0760
gene_biotype: protein_coding
description:
  MOSC domain containing protein; COGs: COG2258 conserved hypothetical protein; InterPro IPR005302:IPR015808:IPR011037; KEGG: ppd:Ppro_0303 MOSC domain-containing protein; PFAM: MOSC domain containing protein; SPTR: A1AKR7 MOSC domain containing protein; PFAM: MOSC domain.


ensembl_gene_id: Deba_0761
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Deba_0762
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Deba_0763
symbol: Deba_0763
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: Deba_0764
symbol: dacA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: Deba_0765
symbol: Deba_0765
gene_biotype: protein_coding
description:
  YbbR family protein; InterPro IPR012505; KEGG: pca:Pcar_1000 hypothetical protein; PFAM: YbbR family protein; SPTR: Q1JY24 YbbR-like; PFAM: YbbR-like protein.


ensembl_gene_id: Deba_0766
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Deba_0767
symbol: coaX
gene_biotype: protein_coding
description:
  Transcriptional activator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Deba_0768
symbol: Deba_0768
gene_biotype: protein_coding
description:
  Peptidase U61 LD-carboxypeptidase A; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: ade:Adeh_3395 peptidase S66, LD-carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A; SPTR: Q2IF02 Peptidase S66, LD-carboxypeptidase A; PFAM: LD-carboxypeptidase.


ensembl_gene_id: Deba_0769
symbol: Deba_0769
gene_biotype: protein_coding
description:
  COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR012338:IPR001466; KEGG: dol:Dole_0591 beta-lactamase; PFAM: beta-lactamase; SPTR: A8ZU89 Beta-lactamase; PFAM: Beta-lactamase.


ensembl_gene_id: Deba_0770
symbol: Deba_0770
gene_biotype: protein_coding
description:
  Mur ligase middle domain protein; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR016040:IPR013221:IPR004101:IPR000713; KEGG: dps:DP2930 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: Q1NLI3 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diam [...]


ensembl_gene_id: Deba_0771
symbol: Deba_0771
gene_biotype: protein_coding
description:
  TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: sat:SYN_01425 outer membrane B12 receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: C0GQ96 Outer membrane insertion C-terminal signal; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.


ensembl_gene_id: Deba_0772
symbol: Deba_0772
gene_biotype: protein_coding
description:
  Protein of unknown function DUF105; COGs: COG1865 conserved hypothetical protein; InterPro IPR002808; KEGG: ppd:Ppro_1265 hypothetical protein; PFAM: protein of unknown function DUF105; SPTR: A1ANG6 Putative uncharacterized protein; PFAM: Adenosylcobinamide amidohydrolase.


ensembl_gene_id: Deba_0773
symbol: Deba_0773
gene_biotype: protein_coding
description:
  Transcriptional regulator, IclR family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: dal:Dalk_2985 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: B8FL40 Transcriptional regulator, IclR family; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.


ensembl_gene_id: Deba_0774
symbol: Deba_0774
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2088; COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: afu:AF0049 hypothetical protein; PFAM: Protein of unknown function DUF2088; SPTR: O30187 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088).


ensembl_gene_id: Deba_0775
symbol: Deba_0775
gene_biotype: protein_coding
description:
  COGs: COG4843 conserved hypothetical protein; KEGG: dal:Dalk_1835 hypothetical protein; SPTR: B8FFX7 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2179).


ensembl_gene_id: Deba_0776
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: Deba_0777
symbol: Deba_0777
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR001647:IPR012287:IPR009057; KEGG: dal:Dalk_2753 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B8FKS3 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_0779
symbol: Deba_0779
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR017200; KEGG: sfu:Sfum_3058 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A0LMT0 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_0780
symbol: Deba_0780
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1150 Heterodisulfide reductase subunit C; InterProIPR009056:IPR017896:IPR012285:IPR009051:IPR 017900; KEGG: dal:Dalk_5066 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FDV6 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Nitrate reductase gamma subunit.


ensembl_gene_id: Deba_0781
symbol: Deba_0781
gene_biotype: protein_coding
description:
  COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: dal:Dalk_5067 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: B8FDV7 CoB--CoM heterodisulfide reductase; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_0783
symbol: Deba_0783
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR003593:IPR002078:IPR000700:IPR 009057:IPR020441:IPR013767:IPR013656:IPR002197; KEGG: dal:Dalk_2273 PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: B8FIH6 PAS modulated sigma54 specific tr [...]


ensembl_gene_id: Deba_0784
symbol: Deba_0784
gene_biotype: protein_coding
description:
  COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012335:IPR012336; KEGG: dal:Dalk_2272 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: B8FIH5 NADH dehydrogenase (Ubiquinone) 24 kDa subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit.


ensembl_gene_id: Deba_0785
symbol: Deba_0785
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017896:IPR012335:IPR012336:IPR011538:IPR 019554:IPR019575:IPR001450:IPR017900:IPR019825:IPR001949; KEGG: dal:Dalk_2271 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: B8FIH4 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoredu [...]


ensembl_gene_id: Deba_0786
symbol: Deba_0786
gene_biotype: protein_coding
description:
  Ferredoxin; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR001041:IPR017896:IPR001450:IPR017900:IPR 000283; KEGG: dal:Dalk_2270 ferredoxin; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FIH3 Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.


ensembl_gene_id: Deba_0787
symbol: Deba_0787
gene_biotype: protein_coding
description:
  Methyl-viologen-reducing hydrogenase delta subunit; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR017896:IPR001450:IPR003813; KEGG: dal:Dalk_2269 methyl-viologen-reducing hydrogenase delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FIH2 Methyl-viologen-reducing hydrogenase delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.


ensembl_gene_id: Deba_0788
symbol: Deba_0788
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR000485:IPR011991:IPR011008; KEGG: dal:Dalk_4142 putative transcriptional regulator, AsnC family; SMART: Transcription regulator, AsnC-type; SPTR: B8FMV6 Putative transcriptional regulator, AsnC family; PFAM: AsnC family.


ensembl_gene_id: Deba_0790
symbol: Deba_0790
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387:IPR010982; KEGG: rsq:Rsph17025_1373 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A4WSA6 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.


ensembl_gene_id: Deba_0791
symbol: Deba_0791
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterProIPR001647:IPR012287:IPR015893:IPR011075:IPR 009057:IPR013570; KEGG: dal:Dalk_3280 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YsiA domain protein; SPTR: B8FJ43 Transcriptional regulator, TetR family; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_0792
symbol: Deba_0792
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000160:IPR001610:IPR001633:IPR 000700:IPR013767:IPR013656:IPR013655; KEGG: pap:PSPA7_0717 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; PAS fold-3 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A6UZ77 Putative uncharacterized p [...]


ensembl_gene_id: Deba_0793
symbol: Deba_0793
gene_biotype: protein_coding
description:
  Flavodoxin; InterPro IPR008254; KEGG: sat:SYN_01229 flavodoxin; SPTR: Q2LW80 Flavodoxin; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Deba_0794
symbol: Deba_0794
gene_biotype: protein_coding
description:
  KEGG: dma:DMR_26440 hypothetical membrane protein; SPTR: C4XUB3 Hypothetical membrane protein; PFAM: Protein of unknown function (DUF2975).


ensembl_gene_id: Deba_0795
symbol: Deba_0795
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: glo:Glov_0100 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; SPTR: B3E9H1 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.


ensembl_gene_id: Deba_0796
symbol: Deba_0796
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR020080:IPR013838; KEGG: ppd:Ppro_2085 hypothetical protein; SPTR: A1AQS3 Putative uncharacterized protein.


ensembl_gene_id: Deba_0798
symbol: Deba_0798
gene_biotype: protein_coding
description:
  Iron-containing alcohol dehydrogenase; COGs: COG0371 Glycerol dehydrogenase; InterPro IPR001670:IPR016160:IPR018211:IPR016205; KEGG: sth:STH1267 glycerol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: C1TM17 Glycerol dehydrogenase-like oxidoreductase; PFAM: Iron-containing alcohol dehydrogenase.


ensembl_gene_id: Deba_0799
symbol: Deba_0799
gene_biotype: protein_coding
description:
  Catalase; COGs: COG0753 Catalase; InterProIPR011614:IPR020835:IPR018028:IPR010582:IPR 002226; KEGG: mbu:Mbur_0523 catalase; PFAM: Catalase related subgroup; Catalase domain protein; PRIAM: Catalase; SPTR: Q12YH1 Catalase; PFAM: Catalase; Catalase-related immune-responsive; Belongs to the catalase family.


ensembl_gene_id: Deba_0800
symbol: fur
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dvm:DvMF_1241 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: B8DLC9 Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Deba_0801
symbol: Deba_0801
gene_biotype: protein_coding
description:
  Thioesterase putative; InterPro IPR006683:IPR012660; KEGG: pmy:Pmen_0555 hypothetical protein; PFAM: Thioesterase putative; thioesterase superfamily protein; SPTR: A4XPQ9 Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; thioesterase domain, putative.


ensembl_gene_id: Deba_0802
symbol: Deba_0802
gene_biotype: protein_coding
description:
  Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterProIPR000644:IPR000595:IPR014710:IPR018490:IPR 005105:IPR018821; KEGG: tye:THEYE_A0033 putative nucleotidyltransferase family; PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein; SPTR: B5YGV7 Putative nucleotidyltransferase  [...]


ensembl_gene_id: Deba_0803
symbol: Deba_0803
gene_biotype: protein_coding
description:
  COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006054:IPR006055:IPR012337:IPR013520; KEGG: cte:CT1039 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: Q8KDK8 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family.


ensembl_gene_id: Deba_0804
symbol: Deba_0804
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hmo:HM1_1627 flagellar hook-associated protein 2, putative; SPTR: B0TE02 Flagellar hook-associated protein 2, putative.


ensembl_gene_id: Deba_0805
symbol: Deba_0805
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dat:HRM2_38320 AcsA3; PFAM: AMP-dependent synthetase and ligase; SPTR: C0GH76 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0806
symbol: Deba_0806
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR017853; KEGG: ank:AnaeK_4399 glycoside hydrolase family 3 domain protein; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Q1NXP1 Glycoside hydrolase, family 3-like; PFAM: Glycosyl hydrolase family 3 N terminal domain.


ensembl_gene_id: Deba_0807
symbol: Deba_0807
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mar:MAE_45780 magnesium protoporphyrin IX chelatase subunit D; SPTR: A8YEX0 Similar to Q4BXZ0_CROWT Magnesium chelatase.


ensembl_gene_id: Deba_0808
symbol: Deba_0808
gene_biotype: protein_coding
description:
  Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR011004:IPR005835:IPR018357; KEGG: ank:AnaeK_3750 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: B4UE03 Nucleotidyl transferase; PFAM: Nucleotidyl transferase.


ensembl_gene_id: Deba_0809
symbol: Deba_0809
gene_biotype: protein_coding
description:
  COGs: COG3178 phosphotransferase related to Ser/Thr protein kinase; InterPro IPR011009:IPR002575; KEGG: dps:DP2940 hypothetical protein; PFAM: aminoglycoside phosphotransferase; SPTR: C8QX22 Aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.


ensembl_gene_id: Deba_0810
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Deba_0811
symbol: gmhA
gene_biotype: protein_coding
description:
  Sugar isomerase (SIS); Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: Deba_0813
symbol: Deba_0813
gene_biotype: protein_coding
description:
  Regulatory protein, FmdB family; InterPro IPR013429:IPR006058; KEGG: sfu:Sfum_3203 hypothetical protein; PFAM: Putative regulatory protein FmdB; SPTR: Q30Y30 Putative uncharacterized protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.


ensembl_gene_id: Deba_0814
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Deba_0815
symbol: Deba_0815
gene_biotype: protein_coding
description:
  uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterProIPR006366:IPR014777:IPR014776:IPR000878:IPR 003754:IPR003043; KEGG: sfu:Sfum_3201 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: A0LN72 Uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.


ensembl_gene_id: Deba_0816
symbol: Deba_0816
gene_biotype: protein_coding
description:
  UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: dma:DMR_07030 ATP-dependent DNA helicase; PFAM: UvrD/REP helicase; SPTR: Q1NUA0 UvrD/REP helicase; PFAM: UvrD/REP helicase.


ensembl_gene_id: Deba_0817
symbol: Deba_0817
gene_biotype: protein_coding
description:
  FolC bifunctional protein; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR001645:IPR013221:IPR004101; KEGG: sfu:Sfum_1671 FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; PRIAM: Tetrahydrofolate synthase; SPTR: A0LIV6 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase.


ensembl_gene_id: Deba_0818
symbol: lptD
gene_biotype: protein_coding
description:
  OstA family protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: Deba_0819
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Deba_0820
symbol: rpsI
gene_biotype: protein_coding
description:
  COGs: COG0103 Ribosomal protein S9; InterProIPR014721:IPR020568:IPR000754:IPR017441:IPR 020574; KEGG: pca:Pcar_1899 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: Q3A3B7 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: Deba_0821
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: Deba_0822
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Deba_0824
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Deba_0825
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Deba_0827
symbol: thrS
gene_biotype: protein_coding
description:
  COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR002320:IPR006195:IPR004154:IPR018163:IPR 018158:IPR012947:IPR002314; KEGG: dde:Dde_2639 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; Anticodon-binding domain protein; SPTR: Q30Y11 Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; Belongs to the class-II  [...]


ensembl_gene_id: Deba_0828
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Deba_0829
symbol: rpmI
gene_biotype: protein_coding
description:
  Ribosomal protein L35; InterPro IPR001706:IPR018265; KEGG: mgm:Mmc1_0365 50S ribosomal protein L35P; PFAM: ribosomal protein L35; SPTR: A6BKH0 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Deba_0830
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Deba_0831
symbol: pheS
gene_biotype: protein_coding
description:
  COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterProIPR004529:IPR006195:IPR010978:IPR004188:IPR 002319; KEGG: sfu:Sfum_0428 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; SPTR: C8QYJ1 Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA syn [...]


ensembl_gene_id: Deba_0832
symbol: pheT
gene_biotype: protein_coding
description:
  COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR004532:IPR002547:IPR005121:IPR012340:IPR 020825:IPR005147:IPR016027:IPR009061:IPR005146; KEGG: sfu:Sfum_0429 phenylalanyl-tRNA synthetase, beta subunit; PFAM: B3/4 domain protein; t-RNA-binding domain protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: A0LFC7 Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synth [...]


ensembl_gene_id: Deba_0833
symbol: Deba_0833
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; InterPro IPR000551:IPR009061; KEGG: aca:ACP_2017 transcription regulator protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1F8V8 Transcription regulator protein; PFAM: MerR family regulatory protein.


ensembl_gene_id: Deba_0835
symbol: Deba_0835
gene_biotype: protein_coding
description:
  DNA polymerase beta domain protein region; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: cyn:Cyan7425_1203 DNA polymerase beta domain protein region; PFAM: DNA polymerase beta domain protein region; SPTR: B8HMG8 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Deba_0836
symbol: Deba_0836
gene_biotype: protein_coding
description:
  Methyltransferase-16, putative; InterPro IPR019410; KEGG: sfu:Sfum_0452 methyltransferase type 12; PFAM: Methyltransferase-16, putative; SPTR: C0GTM9 Methyltransferase small; PFAM: Putative methyltransferase.


ensembl_gene_id: Deba_0837
symbol: Deba_0837
gene_biotype: protein_coding
description:
  Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR017039:IPR004664; KEGG: gme:Gmet_2779 ribonuclease BN; PFAM: ribonuclease BN; SPTR: Q39RX7 Ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).


ensembl_gene_id: Deba_0838
symbol: ade
gene_biotype: protein_coding
description:
  COGs: COG1001 Adenine deaminase; InterPro IPR006679:IPR011059:IPR006680; KEGG: dma:DMR_21960 adenine deaminase; PFAM: amidohydrolase; PRIAM: Adenine deaminase; SPTR: C4XSJ0 Adenine deaminase; TIGRFAM: adenine deaminase; PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: Deba_0839
symbol: Deba_0839
gene_biotype: protein_coding
description:
  Surface antigen (D15); COGs: COG0729 Outer membrane protein; InterPro IPR010827:IPR000184; KEGG: sfu:Sfum_0758 surface antigen (D15); PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: A0LGA4 Surface antigen (D15); PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.


ensembl_gene_id: Deba_0840
symbol: Deba_0840
gene_biotype: protein_coding
description:
  Protein of unknown function DUF490; COGs: COG2911 conserved hypothetical protein; InterPro IPR007452; KEGG: rce:RC1_3925 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: B6IY93 Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).


ensembl_gene_id: Deba_0841
symbol: Deba_0841
gene_biotype: protein_coding
description:
  Transport-associated protein; COGs: COG1102 Cytidylate kinase; InterPro IPR007055; KEGG: gbm:Gbem_2312 transport-associated; PFAM: transport-associated; SPTR: C6MT75 Transport-associated protein; PFAM: Putative phospholipid-binding domain.


ensembl_gene_id: Deba_0842
symbol: Deba_0842
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cpy:Cphy_3493 acyltransferase 3; SPTR: Q3HTI6 Putative acyltransferase; PFAM: Acyltransferase family.


ensembl_gene_id: Deba_0844
symbol: Deba_0844
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: Deba_0845
symbol: Deba_0845
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003593:IPR002078:IPR011006:IPR 009057:IPR020441:IPR002197; KEGG: dvu:DVU3381 transcriptional regulatory protein ZraR; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Q725P3 Transcriptional regulatory protein zraR; PFAM: Response regulator receiver domain; Bacterial regula [...]


ensembl_gene_id: Deba_0846
symbol: Deba_0846
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dat:HRM2_30840 PhoR; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C0QKS7 Sensor protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_0847
symbol: Deba_0847
gene_biotype: protein_coding
description:
  COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544:IPR018300; KEGG: bsu:BSU38550 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: C8R2U2 Branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II.


ensembl_gene_id: Deba_0848
symbol: mtnA
gene_biotype: protein_coding
description:
  Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: Deba_0849
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Deba_0850
symbol: Deba_0850
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701:IPR005829; KEGG: dol:Dole_1430 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ZZ81 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Deba_0851
symbol: Deba_0851
gene_biotype: protein_coding
description:
  UspA domain protein; InterPro IPR014729:IPR006015:IPR006016; KEGG: dol:Dole_1866 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A8ZSD3 UspA domain protein; PFAM: Universal stress protein family.


ensembl_gene_id: Deba_0855
symbol: Deba_0855
gene_biotype: protein_coding
description:
  KEGG: cdl:CDR20291_0586 hypothetical protein; SPTR: B0PCE4 Putative uncharacterized protein; PFAM: Pathogenicity locus.


ensembl_gene_id: Deba_0856
symbol: lexA
gene_biotype: protein_coding
description:
  Transcriptional repressor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: Deba_0857
symbol: Deba_0857
gene_biotype: protein_coding
description:
  COGs: COG1639 signal transduction protein; InterPro IPR013976; KEGG: aeh:Mlg_1873 diguanylate cyclase; PFAM: Metal-dependent hydrolase HDOD; SPTR: Q0A7H0 Diguanylate cyclase; PFAM: HDOD domain.


ensembl_gene_id: Deba_0858
symbol: Deba_0858
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: dal:Dalk_1038 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8FK66 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_0859
symbol: Deba_0859
gene_biotype: protein_coding
description:
  COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: dba:Dbac_2275 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: C7LQF5 Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor.


ensembl_gene_id: Deba_0860
symbol: Deba_0860
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_3279 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FJ42 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_0861
symbol: Deba_0861
gene_biotype: protein_coding
description:
  Putative two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003593:IPR002078:IPR011006:IPR 009057; KEGG: gur:Gura_2708 two component, sigma-54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: A5G514 Putative two component, sigma-54 specific, transcriptional regulator, Fis family; PFAM: Response regulat [...]


ensembl_gene_id: Deba_0862
symbol: Deba_0862
gene_biotype: protein_coding
description:
  COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 001789:IPR005467:IPR000700:IPR011006:IPR009082:IPR004358:I PR013767:IPR000169; KEGG: sfu:Sfum_2401 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; response regulator receiver; SPTR: A0LKY0 Sensor p [...]


ensembl_gene_id: Deba_0865
symbol: dinB
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: Deba_0867
symbol: Deba_0867
gene_biotype: protein_coding
description:
  Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760:IPR020583:IPR020550; KEGG: mxa:MXAN_1914 inositol-1-monophosphatase; PFAM: inositol monophosphatase; SPTR: Q1DB15 Inositol-1-monophosphatase; PFAM: Inositol monophosphatase family.


ensembl_gene_id: Deba_0868
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Deba_0869
symbol: Deba_0869
gene_biotype: protein_coding
description:
  InterPro IPR017896:IPR001450:IPR017900; KEGG: dat:HRM2_45120 iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C0QF67 Iron-sulfur cluster binding protein; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Deba_0870
symbol: Deba_0870
gene_biotype: protein_coding
description:
  cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: Deba_0873
symbol: Deba_0873
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR015867:IPR011322; KEGG: nis:NIS_0493 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Q1PX04 Strongly similar to nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Deba_0874
symbol: Deba_0874
gene_biotype: protein_coding
description:
  Ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR018047; KEGG: csc:Csac_1344 ammonium transporter; PFAM: ammonium transporter; SPTR: A4XJ61 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.


ensembl_gene_id: Deba_0875
symbol: Deba_0875
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR015867:IPR011322; KEGG: sdl:Sdel_0104 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Q1PX04 Strongly similar to nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Deba_0876
symbol: Deba_0876
gene_biotype: protein_coding
description:
  Ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR018047; KEGG: mpd:MCP_0587 ammonium transporter; PFAM: ammonium transporter; SPTR: A4XJ61 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.


ensembl_gene_id: Deba_0877
symbol: hisS
gene_biotype: protein_coding
description:
  COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR015807:IPR006195:IPR004154:IPR002314:IPR 004516; KEGG: ppd:Ppro_1381 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: A1ANS7 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; manually curated; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase.


ensembl_gene_id: Deba_0878
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Deba_0879
symbol: Deba_0879
gene_biotype: protein_coding
description:
  Peptidoglycan-binding lysin domain protein; InterPro IPR018392; KEGG: tgr:Tgr7_2244 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: C0GS09 Putative uncharacterized protein; PFAM: LysM domain.


ensembl_gene_id: Deba_0880
symbol: Deba_0880
gene_biotype: protein_coding
description:
  Biotin/lipoyl attachment domain-containing protein; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089:IPR011053:IPR001882; KEGG: hoh:Hoch_6688 biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: D0LT17 Biotin/lipoyl attachment domain-containing protein; manually curated; PFAM: Biotin-requiring enzyme.


ensembl_gene_id: Deba_0881
symbol: Deba_0881
gene_biotype: protein_coding
description:
  COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR011762:IPR011763:IPR000438:IPR000022; KEGG: pdi:BDI_0075 propionyl-CoA carboxylase beta chain; PFAM: carboxyl transferase; SPTR: C1SKV2 Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta); PFAM: Carboxyl transferase domain.


ensembl_gene_id: Deba_0882
symbol: Deba_0882
gene_biotype: protein_coding
description:
  COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098:IPR014348:IPR016176:IPR006099; KEGG: tex:Teth514_1855 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: C7IS99 Methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain.


ensembl_gene_id: Deba_0883
symbol: Deba_0883
gene_biotype: protein_coding
description:
  Cobalamin B12-binding domain protein; COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006159:IPR006158; KEGG: pth:PTH_1362 methylmalonyl-CoA mutase C-terminal domain-containing protein; PFAM: cobalamin B12-binding domain protein; SPTR: A5D2I7 Methylmalonyl-CoA mutase, C-terminal domain/subunit; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain.


ensembl_gene_id: Deba_0885
symbol: Deba_0885
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR002869; KEGG: dat:HRM2_33520 IorB3; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: C0QMB0 IorB3; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.


ensembl_gene_id: Deba_0886
symbol: Deba_0886
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: Deba_0887
symbol: Deba_0887
gene_biotype: protein_coding
description:
  COGs: COG1035 Coenzyme F420-reducing hydrogenase beta subunit; InterProIPR017896:IPR001450:IPR007516:IPR007525:IPR 017900; KEGG: dal:Dalk_2982 coenzyme F420 hydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: Coenzyme F420 hydrogenase; SPTR: B8FL37 Coenzyme F420 hydrogenase; PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.


ensembl_gene_id: Deba_0888
symbol: rimP
gene_biotype: protein_coding
description:
  Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Deba_0889
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Deba_0890
symbol: Deba_0890
gene_biotype: protein_coding
description:
  Protein of unknown function DUF448; COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination; InterPro IPR007393; KEGG: hor:Hore_07830 predicted nucleic-acid-binding protein implicated in transcription termination; PFAM: protein of unknown function DUF448; SPTR: B8DN13 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF448).


ensembl_gene_id: Deba_0891
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Deba_0892
symbol: Deba_0892
gene_biotype: protein_coding
description:
  Protein of unknown function DUF503; COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: drm:Dred_1275 hypothetical protein; PFAM: protein of unknown function DUF503; SPTR: A4J406 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF503).


ensembl_gene_id: Deba_0893
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Deba_0894
symbol: Deba_0894
gene_biotype: protein_coding
description:
  Phosphoesterase RecJ domain protein; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: hmo:HM1_2316 dhh family domain protein, putative; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: B0THR6 Dhh family domain protein, putative; PFAM: DHH family; DHHA1 domain.


ensembl_gene_id: Deba_0895
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Deba_0896
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: Deba_0897
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Deba_0898
symbol: Deba_0898
gene_biotype: protein_coding
description:
  Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterProIPR011237:IPR011249:IPR011765:IPR007863:IPR 001431; KEGG: gem:GM21_2975 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: C6E2P4 Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.


ensembl_gene_id: Deba_0899
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: Deba_0900
symbol: Deba_0900
gene_biotype: protein_coding
description:
  Beta-lactamase; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: gme:Gmet_1944 beta-lactamase-like; SPTR: C8QYE7 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0901
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Deba_0902
symbol: Deba_0902
gene_biotype: protein_coding
description:
  Protein of unknown function DUF111; COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: gsu:GSU0141 hypothetical protein; PFAM: protein of unknown function DUF111; SPTR: Q74GV3 UPF0272 protein GSU0141; PFAM: Protein of unknown function DUF111; TIGRFAM: conserved hypothetical protein TIGR00299; Belongs to the LarC family.


ensembl_gene_id: Deba_0903
symbol: Deba_0903
gene_biotype: protein_coding
description:
  Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068:IPR008978; KEGG: dol:Dole_2642 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: A8ZX66 Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Deba_0904
symbol: Deba_0904
gene_biotype: protein_coding
description:
  Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068:IPR008978; KEGG: dol:Dole_2643 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: A8ZX67 Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Deba_0905
symbol: Deba_0905
gene_biotype: protein_coding
description:
  COGs: COG1503 Peptide chain release factor 1 (eRF1); KEGG: rmr:Rmar_2532 peptide chain release factor 1 (eRF1)-like protein; SPTR: D0MFR9 Peptide chain release factor 1 (ERF1)-like protein.


ensembl_gene_id: Deba_0906
symbol: Deba_0906
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR003593:IPR002078:IPR001789:IPR011006:IPR 009057:IPR020441:IPR002197; KEGG: dal:Dalk_0661 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: B8FJT8 Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial  [...]


ensembl_gene_id: Deba_0907
symbol: Deba_0907
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat protein; InterProIPR019734:IPR013026:IPR011990:IPR001440:IPR 013105; KEGG: dvm:DvMF_1325 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: B8DLL2 TPR repeat-containing protein; TIGRFAM: outer membrane assembly lipoprotein YfiO.


ensembl_gene_id: Deba_0908
symbol: Deba_0908
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003593:IPR002078:IPR011006:IPR 009057:IPR020441:IPR002197; KEGG: dal:Dalk_0663 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Q1NVH0 Response regulator receiver; PFAM: Response regulator receiver dom [...]


ensembl_gene_id: Deba_0909
symbol: Deba_0909
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Deba_0910
symbol: Deba_0910
gene_biotype: protein_coding
description:
  COGs: COG1558 Flagellar basal body rod protein; InterPro IPR001444:IPR010930:IPR006299; KEGG: mgm:Mmc1_0267 flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: C7ILJ6 Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Deba_0911
symbol: fliE
gene_biotype: protein_coding
description:
  COGs: COG1677 Flagellar hook-basal body protein; InterPro IPR001624; KEGG: gem:GM21_3923 flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; SPTR: C6MM83 Flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.


ensembl_gene_id: Deba_0912
symbol: Deba_0912
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Deba_0913
symbol: Deba_0913
gene_biotype: protein_coding
description:
  COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090:IPR011002; KEGG: dba:Dbac_3030 flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; SPTR: C0GRQ1 Flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.


ensembl_gene_id: Deba_0914
symbol: Deba_0914
gene_biotype: protein_coding
description:
  COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein; KEGG: dal:Dalk_0669 flagellar assembly protein FliH; SPTR: B8FJU6 Flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH.


ensembl_gene_id: Deba_0915
symbol: Deba_0915
gene_biotype: protein_coding
description:
  Flagellar protein export ATPase FliI; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterProIPR004100:IPR000194:IPR005714:IPR020005:IPR 003593; KEGG: dma:DMR_45080 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; SPTR: Q1NVG3 ATPase FliI/YscN; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-bin [...]


ensembl_gene_id: Deba_0916
symbol: Deba_0916
gene_biotype: protein_coding
description:
  InterPro IPR012823; KEGG: gem:GM21_3918 flagellar export protein FliJ; SPTR: C6E8E4 Flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ.


ensembl_gene_id: Deba_0917
symbol: Deba_0917
gene_biotype: protein_coding
description:
  MgtE intracellular region; InterPro IPR006668; KEGG: mag:amb3500 FlaA locus 229 kDa protein; PFAM: MgtE intracellular region; SPTR: Q2W1H1 FlaA locus 229 kDa protein; PFAM: MgtE intracellular N domain.


ensembl_gene_id: Deba_0918
symbol: Deba_0918
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR009010:IPR006963:IPR006656:IPR006657; KEGG: dal:Dalk_0693 molydopterin dinucleotide-binding region; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: B8FJX0 Molydopterin dinucleotide-binding region; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Deba_0919
symbol: Deba_0919
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; COGs: COG3576 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase; InterPro IPR009002:IPR011576; KEGG: sat:SYN_02719 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Q2LRW1 Flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Deba_0920
symbol: Deba_0920
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1847; COGs: COG4887 Uncharacterized metal-binding protein; InterPro IPR014997; KEGG: dal:Dalk_4328 protein of unknown function DUF1847; PFAM: Protein of unknown function DUF1847; SPTR: B8FMH0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1847).


ensembl_gene_id: Deba_0921
symbol: Deba_0921
gene_biotype: protein_coding
description:
  KEGG: dba:Dbac_0543 hypothetical protein; SPTR: C7LWH5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3124).


ensembl_gene_id: Deba_0922
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: Deba_0924
symbol: Deba_0924
gene_biotype: protein_coding
description:
  Putative phytochrome sensor protein; InterPro IPR003018; KEGG: sfu:Sfum_1918 hypothetical protein; PFAM: GAF domain protein; SMART: GAF domain protein; SPTR: A0LJK1 Putative uncharacterized protein; PFAM: GAF domain.


ensembl_gene_id: Deba_0925
symbol: Deba_0925
gene_biotype: protein_coding
description:
  Cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: sfu:Sfum_1917 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: A0LJK0 Rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.


ensembl_gene_id: Deba_0928
symbol: Deba_0928
gene_biotype: protein_coding
description:
  Protein of unknown function DUF167; COGs: COG1872 conserved hypothetical protein; InterPro IPR003746; KEGG: dae:Dtox_1088 protein of unknown function DUF167; PFAM: protein of unknown function DUF167; SPTR: C8W4A6 Putative uncharacterized protein; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: conserved hypothetical protein TIGR00251; Belongs to the UPF0235 family.


ensembl_gene_id: Deba_0929
symbol: Deba_0929
gene_biotype: protein_coding
description:
  DivIVA domain protein; InterPro IPR007793:IPR019933; KEGG: dsa:Desal_2401 DivIVA family protein; PFAM: DivIVA family protein; SPTR: C0GMA7 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain.


ensembl_gene_id: Deba_0930
symbol: Deba_0930
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR015797:IPR000086; KEGG: rde:RD1_0410 hydrolase, putative; PFAM: NUDIX hydrolase; SPTR: Q16D17 Hydrolase, putative; PFAM: NUDIX domain.


ensembl_gene_id: Deba_0931
symbol: Deba_0931
gene_biotype: protein_coding
description:
  COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: bvu:BVU_2240 putative hydrolase; SPTR: C6Z5F9 Metal-dependent hydrolase; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0933
symbol: Deba_0933
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afu:AF0367 oxalate/formate antiporter (OxlT-2); SPTR: O29880 Oxalate/formate antiporter (OxlT-2).


ensembl_gene_id: Deba_0934
symbol: Deba_0934
gene_biotype: protein_coding
description:
  Peptidoglycan binding domain protein; COGs: COG3926 Putative secretion activating protein; InterPro IPR008565:IPR018537; KEGG: pde:Pden_4087 hypothetical protein; PFAM: Peptidoglycan binding domain; protein of unknown function DUF847; SPTR: A1B9F9 Putative uncharacterized protein; PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847).


ensembl_gene_id: Deba_0936
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Deba_0937
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Deba_0938
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Deba_0939
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Deba_0940
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Deba_0941
symbol: tsaD
gene_biotype: protein_coding
description:
  Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Deba_0942
symbol: fbp
gene_biotype: protein_coding
description:
  Inositol phosphatase/fructose-16-bisphosphatase; COGs: COG0158 Fructose-1 6-bisphosphatase; InterPro IPR000146:IPR020548; KEGG: dvm:DvMF_0404 fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; SPTR: C0GQU0 Inositol phosphatase/fructose-16-bisphosphatase; PFAM: Fructose-1-6-bisphosphatase.


ensembl_gene_id: Deba_0943
symbol: Deba_0943
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase/homocitrate synthase family protein; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR013709:IPR000891:IPR002034:IPR013785:IPR 005675; KEGG: sfu:Sfum_2174 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; SPTR: A0LKA4 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family pro [...]


ensembl_gene_id: Deba_0944
symbol: Deba_0944
gene_biotype: protein_coding
description:
  COGs: COG0527 Aspartokinase; InterProIPR001057:IPR001048:IPR002912:IPR018042:IPR 001341:IPR005260; KEGG: pca:Pcar_1006 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: Q3A5V0 Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Belongs to the aspartokinase family.


ensembl_gene_id: Deba_0945
symbol: Deba_0945
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0079; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: sat:SYN_02780 ATP/GTP hydrolase; PFAM: protein of unknown function UPF0079; SPTR: Q2LTJ6 ATP/GTP hydrolase; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein.


ensembl_gene_id: Deba_0946
symbol: nnrD
gene_biotype: protein_coding
description:
  Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]


ensembl_gene_id: Deba_0947
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-acyl-carrier-protein synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: Deba_0948
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: Deba_0949
symbol: ybeY
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Deba_0950
symbol: Deba_0950
gene_biotype: protein_coding
description:
  7TM receptor with intracellular metal dependent phosphohydrolase; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR011621:IPR006674:IPR006675:IPR003607; KEGG: dol:Dole_0778 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; SMART: metal-dependent phosphohydrolase HD region; SPTR: A8ZVC7 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: ATP synthase subunit 6 (eukaryotes),a [...]


ensembl_gene_id: Deba_0951
symbol: Deba_0951
gene_biotype: protein_coding
description:
  PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: dal:Dalk_3324 PhoH family protein; PFAM: PhoH family protein; SPTR: B8FJ86 PhoH family protein; PFAM: PhoH-like protein.


ensembl_gene_id: Deba_0952
symbol: Deba_0952
gene_biotype: protein_coding
description:
  COGs: COG1286 membrane protein required for colicin V production; InterPro IPR003825; KEGG: dal:Dalk_3649 colicin V production protein; PFAM: Colicin V production protein; SPTR: B8FGV7 Colicin V production protein; PFAM: Colicin V production protein.


ensembl_gene_id: Deba_0953
symbol: Deba_0953
gene_biotype: protein_coding
description:
  MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR011551; KEGG: scl:sce4803 hypothetical protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: A9FF91 Putative uncharacterized protein mazG; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.


ensembl_gene_id: Deba_0954
symbol: Deba_0954
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR002322; KEGG: dat:HRM2_40490 hypothetical protein; SPTR: C0QC90 Putative uncharacterized protein; PFAM: Class III cytochrome C family.


ensembl_gene_id: Deba_0955
symbol: Deba_0955
gene_biotype: protein_coding
description:
  InterPro IPR001450:IPR017900:IPR017896; KEGG: dba:Dbac_0275 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C7LUW8 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Deba_0956
symbol: Deba_0956
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; InterProIPR001440:IPR011717:IPR011990:IPR019734:IPR 013026; KEGG: mta:Moth_1598 hypothetical protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide repeat; SPTR: Q2RI35 Putative uncharacterized protein.


ensembl_gene_id: Deba_0957
symbol: Deba_0957
gene_biotype: protein_coding
description:
  InterPro IPR014793:IPR011991; KEGG: dba:Dbac_0281 dissimilatory sulfite reductase D; PFAM: Dissimilatory sulfite reductase D; SPTR: C7LUX4 Dissimilatory sulfite reductase D; PFAM: Dissimilatory sulfite reductase D (DsrD).


ensembl_gene_id: Deba_0958
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: Deba_0959
symbol: Deba_0959
gene_biotype: protein_coding
description:
  COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterProIPR005117:IPR006067:IPR001450:IPR017900:IPR 017896:IPR011808; KEGG: sfu:Sfum_4043 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: Hydrogensulfite reductase; SPTR: A0LQK7 Sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: Nitrite an [...]


ensembl_gene_id: Deba_0960
symbol: Deba_0960
gene_biotype: protein_coding
description:
  COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterPro IPR006067:IPR011806; KEGG: dal:Dalk_4301 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; PRIAM: Hydrogensulfite reductase; SPTR: Q93EU9 Dissimilatory sulfite reductase alpha subunit (Fragment); TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.


ensembl_gene_id: Deba_0961
symbol: Deba_0961
gene_biotype: protein_coding
description:
  KEGG: gyc:GYMC61_2168 protein of unknown function DUF955; SPTR: C9S113 Putative uncharacterized protein.


ensembl_gene_id: Deba_0962
symbol: Deba_0962
gene_biotype: protein_coding
description:
  Protein of unknown function DUF500; COGs: COG2930 conserved hypothetical protein; InterPro IPR007461; KEGG: xac:XAC4219 hypothetical protein; PFAM: protein of unknown function DUF500; SPTR: Q8PEX1 Putative uncharacterized protein; PFAM: Family of unknown function (DUF500).


ensembl_gene_id: Deba_0963
symbol: Deba_0963
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; InterPro IPR001440:IPR011990:IPR019734:IPR013026; KEGG: ami:Amir_6259 NB-ARC domain protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: C6WIY7 NB-ARC domain protein; PFAM: Tetratricopeptide repeat.


ensembl_gene_id: Deba_0964
symbol: Deba_0964
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0047; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: pth:PTH_0986 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: A5D3M9 Uncharacterized conserved protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149.


ensembl_gene_id: Deba_0965
symbol: Deba_0965
gene_biotype: protein_coding
description:
  COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sat:SYN_02143 Zn-dependent hydrolases; SPTR: Q2LSA2 Zn-dependent hydrolases; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_0967
symbol: pyrR
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: Deba_0968
symbol: Deba_0968
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR001647:IPR009057:IPR012287; KEGG: dat:HRM2_21660 HTH-type transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C0QDK0 HTH-type transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_0969
symbol: Deba_0969
gene_biotype: protein_coding
description:
  Propanoyl-CoA C-acyltransferase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR016038:IPR002155; KEGG: dat:HRM2_45290 AtoB5; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: D1JF94 Putative thiolase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Deba_0970
symbol: Deba_0970
gene_biotype: protein_coding
description:
  Protein of unknown function DUF35; COGs: COG1545 nucleic-acid-binding protein containing a Zn-ribbon; InterPro IPR002878; KEGG: afu:AF1292 hypothetical protein; PFAM: protein of unknown function DUF35; SPTR: O28977 Putative uncharacterized protein; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain.


ensembl_gene_id: Deba_0971
symbol: Deba_0971
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198:IPR016040; KEGG: dat:HRM2_45260 FabG9; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C0QF81 FabG9; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Deba_0972
symbol: Deba_0972
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006092:IPR006091:IPR 006090:IPR006089:IPR013786:IPR013764; KEGG: afu:AF0436 acyl-CoA dehydrogenase (acd-2); PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B9ZGA7 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_0974
symbol: Deba_0974
gene_biotype: protein_coding
description:
  Protein of unknown function DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR008928:IPR012336:IPR004879:IPR012335; KEGG: sfu:Sfum_2547 hypothetical protein; PFAM: protein of unknown function DUF255; SPTR: A0LLC3 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255.


ensembl_gene_id: Deba_0978
symbol: Deba_0978
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: mno:Mnod_1560 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8IPQ2 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_0980
symbol: Deba_0980
gene_biotype: protein_coding
description:
  Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterProIPR016027:IPR003029:IPR019307:IPR012340:IPR 004659; KEGG: gme:Gmet_2546 ribonuclease E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Q39SK9 Ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.


ensembl_gene_id: Deba_0981
symbol: Deba_0981
gene_biotype: protein_coding
description:
  InterPro IPR001450:IPR017900:IPR017896:IPR011802; KEGG: sfu:Sfum_1047 adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6ZJS6 AprB (Fragment); TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: Adenosine-5'-phosphosulfate reductase beta subunit; TIGRFAM: adenosine phosphosulphate reductase, beta subunit.


ensembl_gene_id: Deba_0982
symbol: Deba_0982
gene_biotype: protein_coding
description:
  Dissimilatory adenylylsulfate reductase alpha subunit precursor; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR015939:IPR003953:IPR011803; KEGG: sfu:Sfum_1048 adenylylsulfate reductase subunit alpha; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A6ZJS7 AprA (Fragment); TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: domain; FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit.


ensembl_gene_id: Deba_0983
symbol: Deba_0983
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR006076; KEGG: sfu:Sfum_1287 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: FAD dependent oxidoreductase; SPTR: A0LHS7 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: Deba_0984
symbol: Deba_0984
gene_biotype: protein_coding
description:
  Methyl-viologen-reducing hydrogenase delta subunit; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterProIPR013027:IPR004792:IPR001450:IPR003813:IPR 017900:IPR017896; KEGG: adg:Adeg_1078 methyl-viologen-reducing hydrogenase delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit; HI0933 family protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C9RD78 Methyl-viologen-reducing hydrogenase delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Deba_0985
symbol: Deba_0985
gene_biotype: protein_coding
description:
  COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR009051:IPR017900:IPR012285:IPR017896; KEGG: drm:Dred_0633 putative heterodisulfide reductase, C subunit; SPTR: A7BT24 Heterodisulfide reductase subunit C.


ensembl_gene_id: Deba_0986
symbol: Deba_0986
gene_biotype: protein_coding
description:
  COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: dae:Dtox_3573 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: C8VVZ8 CoB--CoM heterodisulfide reductase; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_0987
symbol: Deba_0987
gene_biotype: protein_coding
description:
  KEGG: sfu:Sfum_1055 hypothetical protein; SPTR: A0LH47 Putative uncharacterized protein; PFAM: Ogr/Delta-like zinc finger.


ensembl_gene_id: Deba_0988
symbol: Deba_0988
gene_biotype: protein_coding
description:
  SEC-C motif domain protein; InterPro IPR004027:IPR010916; KEGG: chl:Chy400_0565 preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SPTR: B9LJ40 Protein translocase subunit secA; PFAM: SEC-C motif.


ensembl_gene_id: Deba_0989
symbol: Deba_0989
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: azc:AZC_1520 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A8HXN1 Glycosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0990
symbol: Deba_0990
gene_biotype: protein_coding
description:
  InterPro IPR001173; KEGG: azc:AZC_1521 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: A8HXN4 Glycosyltransferase; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0991
symbol: Deba_0991
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; InterPro IPR001440:IPR011990:IPR019734:IPR013026; KEGG: ter:Tery_2862 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: Q4CAF1 TPR repeat:Sel1-like repeat:Sel1-like repeat; TIGRFAM: pentatricopeptide repeat domain (PPR motif).


ensembl_gene_id: Deba_0992
symbol: Deba_0992
gene_biotype: protein_coding
description:
  COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: ter:Tery_4437 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Q10WF0 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0993
symbol: Deba_0993
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hau:Haur_2165 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: A2BD23 WsbJ; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_0994
symbol: Deba_0994
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: dvm:DvMF_2922 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B9BAZ3 UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Deba_0995
symbol: Deba_0995
gene_biotype: protein_coding
description:
  COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: mag:amb1074 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Q2W8E7 Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_0996
symbol: Deba_0996
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR003660:IPR004089:IPR018212; KEGG: dps:DP0161 methyl-accepting chemotaxis protein (TlpB); PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: Q6ARY5 Related to methyl-accepting chemotaxis protein (TlpB); PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_0997
symbol: Deba_0997
gene_biotype: protein_coding
description:
  COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterProIPR001821:IPR019546:IPR006137:IPR016160:IPR 017909:IPR006311; KEGG: dps:DP0160 periplasmic [NiFeSe] hydrogenase, small subunit [precursor]; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Twin-arginine translocation pathway, signal sequence, subgroup; PRIAM: Hydrogenase (acceptor); SPTR: Q6ARY6 Related to periplasmic [NiFeSe] hydrogenase, small subunit [Precursor]; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal seq [...]


ensembl_gene_id: Deba_0998
symbol: Deba_0998
gene_biotype: protein_coding
description:
  COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501:IPR018194; KEGG: dps:DP0159 cytochrome-c3 hydrogenase (NiFeSe), large subunit; PFAM: nickel-dependent hydrogenase large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: Q6ARY7 Related to cytochrome-c3 hydrogenase (NiFeSe), large subunit; PFAM: Nickel-dependent hydrogenase.


ensembl_gene_id: Deba_0999
symbol: Deba_0999
gene_biotype: protein_coding
description:
  SMC domain protein; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: ppf:Pput_2963 ATPase involved in DNA repair-like protein; PFAM: SMC domain protein; SPTR: A5W4N1 ATPase involved in DNA repair-like protein.


ensembl_gene_id: Deba_1000
symbol: Deba_1000
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pmi:PMT9312_0494 thermostable carboxypeptidase 1; SPTR: Q31C40 Thermostable carboxypeptidase 1.


ensembl_gene_id: Deba_1003
symbol: Deba_1003
gene_biotype: protein_coding
description:
  COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: gsu:GSU3025 heptosyltransferase family protein; PFAM: glycosyl transferase family 9; SPTR: Q748H7 Heptosyltransferase family protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II.


ensembl_gene_id: Deba_1004
symbol: Deba_1004
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fjo:Fjoh_1898 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: C3FB30 Glycosyl transferase, group 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1005
symbol: Deba_1005
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rxy:Rxyl_3107 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Q1ARG4 Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_1006
symbol: Deba_1006
gene_biotype: protein_coding
description:
  COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein; PFAM: glycosyl transferase family 2; SPTR: Q748H9 Glycosyl transferase, group 1/2 family protein; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1008
symbol: Deba_1008
gene_biotype: protein_coding
description:
  COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterProIPR013105:IPR011717:IPR011990:IPR019734:IPR 013026; KEGG: cbh:CLC_2580 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; SPTR: C6PUP8 Putative uncharacterized protein.


ensembl_gene_id: Deba_1009
symbol: Deba_1009
gene_biotype: protein_coding
description:
  Dihydropteroate synthase DHPS; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterPro IPR011005:IPR000489; KEGG: dal:Dalk_4619 dihydropteroate synthase DhpS; PFAM: dihydropteroate synthase DHPS; SPTR: B8FNL6 Dihydropteroate synthase DHPS; PFAM: Pterin binding enzyme.


ensembl_gene_id: Deba_1010
symbol: Deba_1010
gene_biotype: protein_coding
description:
  COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR006261:IPR003607; KEGG: dol:Dole_1124 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q1NXY4 Deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: Deba_1011
symbol: Deba_1011
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: rca:Rcas_0546 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A7NGS9 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.


ensembl_gene_id: Deba_1013
symbol: Deba_1013
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: adg:Adeg_1596 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C9R8R2 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_1014
symbol: Deba_1014
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dba:Dbac_2284 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C7LQG4 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_1015
symbol: Deba_1015
gene_biotype: protein_coding
description:
  ABC transporter substrate binding protein precursor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; KEGG: dma:DMR_09050 ABC transporter substrate binding protein precursor; SPTR: C4XK41 ABC transporter substrate binding protein.


ensembl_gene_id: Deba_1016
symbol: Deba_1016
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: cag:Cagg_2428 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8G3C8 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Deba_1017
symbol: Deba_1017
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: dvm:DvMF_2446 phenylacetate-coenzyme A ligase, putative; PFAM: AMP-dependent synthetase and ligase; SPTR: B8DMU7 Phenylacetate-coenzyme A ligase, putative; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_1018
symbol: mqnA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Deba_1019
symbol: Deba_1019
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: cbh:CLC_2580 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: C6PUP8 Putative uncharacterized protein; PFAM: Methyltransferase domain; Glycosyl transferases group 1.


ensembl_gene_id: Deba_1022
symbol: Deba_1022
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 4,6-dehydratase; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869:IPR020025; KEGG: dsa:Desal_3630 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: C6BTJ5 Polysaccharide biosynthesis protein CapD; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase.


ensembl_gene_id: Deba_1023
symbol: Deba_1023
gene_biotype: protein_coding
description:
  COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: phe:Phep_3568 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: C4V428 Aldo/keto reductase; PFAM: Aldo/keto reductase family.


ensembl_gene_id: Deba_1024
symbol: Deba_1024
gene_biotype: protein_coding
description:
  Acylneuraminate cytidylyltransferase; COGs: COG1861 Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase homolog; InterPro IPR003329; KEGG: rpf:Rpic12D_0583 acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: C6BDF3 Acylneuraminate cytidylyltransferase; PFAM: Cytidylyltransferase.


ensembl_gene_id: Deba_1025
symbol: Deba_1025
gene_biotype: protein_coding
description:
  Aminotransferase class-III; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR015424:IPR005814:IPR015421; KEGG: nwi:Nwi_2388 aminotransferase class-III; PFAM: aminotransferase class-III; SPTR: Q3SPZ9 Aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Deba_1026
symbol: Deba_1026
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: Deba_1027
symbol: Deba_1027
gene_biotype: protein_coding
description:
  COGs: COG2089 Sialic acid synthase; InterPro IPR006190:IPR013132:IPR013974:IPR013785; KEGG: fnu:FN1684 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acetylneuraminate synthase; SPTR: A3Z4G4 N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family.


ensembl_gene_id: Deba_1028
symbol: Deba_1028
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sye:Syncc9902_0083 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Q2BI18 Glycosyltransferase; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1029
symbol: Deba_1029
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sye:Syncc9902_0043 methylase involved in ubiquinone/menaquinone biosynthesis-like; PFAM: Methyltransferase type 11; SPTR: Q3B0W0 Methylase involved in ubiquinone/menaquinone biosynthesis-like; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1030
symbol: Deba_1030
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR019809; KEGG: mtp:Mthe_1067 methyltransferase type 11; SPTR: A0B827 Methyltransferase type 11.


ensembl_gene_id: Deba_1031
symbol: Deba_1031
gene_biotype: protein_coding
description:
  COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR011004:IPR001451:IPR018357; KEGG: ade:Adeh_4281 acetyltransferase; SPTR: Q2IHI8 Acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: Deba_1032
symbol: Deba_1032
gene_biotype: protein_coding
description:
  Radical SAM domain protein; InterPro IPR007197; KEGG: cbh:CLC_2585 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A7FQ13 Putative uncharacterized protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_1033
symbol: Deba_1033
gene_biotype: protein_coding
description:
  COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: tro:trd_1593 dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Q2BI24 Teichoic acid biosynthesis protein; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1034
symbol: Deba_1034
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158:IPR007197:IPR013785:IPR006638; KEGG: dol:Dole_1742 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A9A0S1 Radical SAM domain protein; PFAM: Radical SAM superfamily; B12 binding domain.


ensembl_gene_id: Deba_1035
symbol: Deba_1035
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sit:TM1040_1022 L-glutamine synthetase; SPTR: C9D3W7 Glutamine synthetase, type I.


ensembl_gene_id: Deba_1036
symbol: Deba_1036
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: amc:MADE_02638 enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: B4RTC8 Enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_1037
symbol: Deba_1037
gene_biotype: protein_coding
description:
  COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766:IPR011896; KEGG: drt:Dret_0516 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; PRIAM: 2-oxoglutarate synthase; SPTR: C8X0I8 Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; T [...]


ensembl_gene_id: Deba_1038
symbol: Deba_1038
gene_biotype: protein_coding
description:
  Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002869:IPR009014:IPR019752:IPR002880; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: B8DNT7 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.


ensembl_gene_id: Deba_1039
symbol: Deba_1039
gene_biotype: protein_coding
description:
  Intracellular protease, PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818:IPR006286; KEGG: dba:Dbac_2033 intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; SPTR: Q1NLN4 Peptidase C56, PfpI; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family.


ensembl_gene_id: Deba_1040
symbol: Deba_1040
gene_biotype: protein_coding
description:
  AIG2 family protein; COGs: COG2105 conserved hypothetical protein; InterPro IPR009288:IPR013024; KEGG: ent:Ent638_0400 hypothetical protein; PFAM: AIG2 family protein; SPTR: A3UE45 Putative uncharacterized protein; PFAM: AIG2-like family.


ensembl_gene_id: Deba_1041
symbol: trmB
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: Deba_1042
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase D TruD; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: Deba_1044
symbol: sfsA
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding protein; COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224:IPR000595; KEGG: gsu:GSU2716 sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; SPTR: P61664 Sugar fermentation stimulation protein homolog; TIGRFAM: sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; Belongs to the SfsA family.


ensembl_gene_id: Deba_1045
symbol: Deba_1045
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158:IPR007197:IPR013785:IPR006638; KEGG: dol:Dole_3058 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ZZI9 Radical SAM domain protein; PFAM: Radical SAM superfamily; B12 binding domain.


ensembl_gene_id: Deba_1047
symbol: Deba_1047
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR008930:IPR001300; KEGG: dal:Dalk_2453 hypothetical protein; SPTR: B8FB60 Putative uncharacterized protein.


ensembl_gene_id: Deba_1048
symbol: Deba_1048
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dol:Dole_2593 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A8ZWR5 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1049
symbol: Deba_1049
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dal:Dalk_3322 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B8FJ84 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_1050
symbol: Deba_1050
gene_biotype: protein_coding
description:
  COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: rxy:Rxyl_3119 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Q1ARF2 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1051
symbol: Deba_1051
gene_biotype: protein_coding
description:
  Vinylacetyl-CoA Delta-isomerase; COGs: COG2368 Aromatic ring hydroxylase; InterPro IPR009100:IPR004925:IPR006091:IPR013764; KEGG: chy:CHY_1730 4-hydroxyphenylacetate 3-hydroxylase family protein; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; PRIAM: Vinylacetyl-CoA Delta-isomerase; SPTR: Q3ABD4 4-hydroxyphenylacetate 3-hydroxylase family protein; PFAM: 4-hydroxyphenylacetate 3-hydroxylase N terminal; 4-hydroxyphenylacetate 3-hydroxylase C terminal.


ensembl_gene_id: Deba_1052
symbol: Deba_1052
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR009057:IPR001647:IPR012287; KEGG: dat:HRM2_21370 HTH-type transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C0QDH1 HTH-type transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_1053
symbol: prfB
gene_biotype: protein_coding
description:
  LigA; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Deba_1054
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Deba_1055
symbol: Deba_1055
gene_biotype: protein_coding
description:
  COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR005170; KEGG: gme:Gmet_2368 CBS:transporter-associated region; PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; SPTR: Q39T31 CBS:Transporter-associated region; PFAM: CBS domain; Transporter associated domain.


ensembl_gene_id: Deba_1057
symbol: Deba_1057
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: sfu:Sfum_0187 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A0LEN7 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_1058
symbol: Deba_1058
gene_biotype: protein_coding
description:
  KEGG: sfu:Sfum_0186 glycosyl transferase family protein; SPTR: A0LEN6 Glycosyl transferase, family 2.


ensembl_gene_id: Deba_1059
symbol: Deba_1059
gene_biotype: protein_coding
description:
  Peptidase S58 DmpA; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR016117:IPR005321; KEGG: vap:Vapar_3677 peptidase S58 DmpA; PFAM: peptidase S58 DmpA; SPTR: C5CU81 Peptidase S58 DmpA; PFAM: Peptidase family S58.


ensembl_gene_id: Deba_1060
symbol: Deba_1060
gene_biotype: protein_coding
description:
  Phosphate binding protein; COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR006059:IPR011862; KEGG: sat:SYN_00056 ABC-type phosphate transport system, periplasmic component; PFAM: extracellular solute-binding protein family 1; SPTR: Q2LTF4 ABC-type phosphate transport system, periplasmic component; TIGRFAM: phosphate binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein.


ensembl_gene_id: Deba_1062
symbol: Deba_1062
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Deba_1063
symbol: Deba_1063
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, inner membrane subunit PstA; COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: sat:SYN_00058 ABC-type phosphate transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q2LTG1 ABC-type phosphate transport system, permease component; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA.


ensembl_gene_id: Deba_1064
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: Deba_1066
symbol: Deba_1066
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867:IPR018480; KEGG: sfu:Sfum_0707 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A0LG53 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Deba_1067
symbol: Deba_1067
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR009082:IPR003660:IPR 013656:IPR003661:IPR005467:IPR000014; KEGG: ppd:Ppro_3156 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; SPTR: A1ATS9 Sensor protein; TIGRFAM: PAS sensor protein; PFAM:  [...]


ensembl_gene_id: Deba_1068
symbol: Deba_1068
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aba:Acid345_0890 polysaccharide biosynthesis protein; SPTR: C0W543 Membrane protein.


ensembl_gene_id: Deba_1069
symbol: Deba_1069
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bba:Bd2232 single-strand DNA-specific exonuclease; SPTR: C1MHE7 Predicted protein.


ensembl_gene_id: Deba_1070
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine/tRNA-ribosyltransferase-iso merase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Deba_1071
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: Deba_1072
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: Deba_1073
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Deba_1074
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Deba_1075
symbol: Deba_1075
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: gsu:GSU0106 soj protein; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: Q74GY7 Soj protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_1076
symbol: Deba_1076
gene_biotype: protein_coding
description:
  parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: gme:Gmet_3412 chromosome segregation DNA-binding protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: B9XGP1 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.


ensembl_gene_id: Deba_1077
symbol: Deba_1077
gene_biotype: protein_coding
description:
  Protein of unknown function DUF901; InterPro IPR010298; KEGG: dol:Dole_1633 hypothetical protein; PFAM: protein of unknown function DUF901; SPTR: A9A0D7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF901).


ensembl_gene_id: Deba_1078
symbol: Deba_1078
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR009082:IPR001789:IPR003661; KEGG: mxa:MXAN_1245 sigma-54 dependent DNA-binding response regulator SasR; PFAM: response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; SPTR: Q1DCW9 Sigma-54 dependent DNA-binding response regulator SasR; PFAM: Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_1079
symbol: plsY
gene_biotype: protein_coding
description:
  Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Deba_1081
symbol: Deba_1081
gene_biotype: protein_coding
description:
  RNA-binding protein, predicted; InterPro IPR019300; KEGG: tye:THEYE_A0086 hypothetical protein; PFAM: RNA-binding protein, predicted; SPTR: B5YHB6 Putative uncharacterized protein; PFAM: Predicted RNA-binding protein.


ensembl_gene_id: Deba_1082
symbol: Deba_1082
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: dol:Dole_2131 hypothetical protein; SPTR: A8ZU02 Putative uncharacterized protein.


ensembl_gene_id: Deba_1083
symbol: Deba_1083
gene_biotype: protein_coding
description:
  InterPro IPR000620; KEGG: gur:Gura_2208 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A5G3M5 Putative uncharacterized protein; PFAM: EamA-like transporter family.


ensembl_gene_id: Deba_1084
symbol: Deba_1084
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterProIPR016040:IPR013099:IPR003148:IPR006037:IPR 000209; KEGG: glo:Glov_0875 TrkA-N domain protein; PFAM: TrkA-N domain protein; Ion transport 2 domain protein; TrkA-C domain protein; SPTR: B3E534 TrkA-N domain protein; PFAM: TrkA-N domain; Ion channel; TrkA-C domain.


ensembl_gene_id: Deba_1085
symbol: Deba_1085
gene_biotype: protein_coding
description:
  MJ0042 family finger-like protein; InterPro IPR011723; KEGG: dma:DMR_21170 hypothetical protein; SPTR: C4XS86 Putative uncharacterized protein; TIGRFAM: MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like domain.


ensembl_gene_id: Deba_1086
symbol: Deba_1086
gene_biotype: protein_coding
description:
  COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836:IPR005904; KEGG: sfu:Sfum_1422 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: A0LI61 Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Deba_1087
symbol: Deba_1087
gene_biotype: protein_coding
description:
  Protein of unknown function DUF339; InterPro IPR005631; KEGG: rce:RC1_1263 TPR domain protein; PFAM: protein of unknown function DUF339; SPTR: Q2C9T4 TPR repeat family protein; PFAM: Protein of unknown function (DUF339).


ensembl_gene_id: Deba_1088
symbol: Deba_1088
gene_biotype: protein_coding
description:
  COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR009051:IPR001041:IPR017900:IPR012675:IPR 012285:IPR017896:IPR004489; KEGG: bpt:Bpet1823 succinate dehydrogenase iron-sulfur subunit; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: C1SJU7 Succinate dehydrogenase subunit B; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.


ensembl_gene_id: Deba_1089
symbol: Deba_1089
gene_biotype: protein_coding
description:
  COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR015939:IPR003953:IPR004112:IPR003952:IPR 011281:IPR014006; KEGG: apt:APA01_00330 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1SJU6 Succinate dehydrogenase subunit A; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; su [...]


ensembl_gene_id: Deba_1090
symbol: Deba_1090
gene_biotype: protein_coding
description:
  COGs: COG2142 Succinate dehydrogenase hydrophobic anchor subunit; InterPro IPR000701:IPR014312; KEGG: cts:Ctha_0457 succinate dehydrogenase, membrane subunit, putative; PFAM: succinate dehydrogenase cytochrome b subunit; SPTR: B3QUM2 Succinate dehydrogenase, membrane subunit, putative; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein.


ensembl_gene_id: Deba_1091
symbol: Deba_1091
gene_biotype: protein_coding
description:
  InterPro IPR000701:IPR014314:IPR014312; KEGG: rmr:Rmar_0208 succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; SPTR: D0MD04 Succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, cytochrome b556 subunit.


ensembl_gene_id: Deba_1092
symbol: Deba_1092
gene_biotype: protein_coding
description:
  Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: nis:NIS_0837 fumarate/tartrate hydratase, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: A6Q390 Fumarate/tartrate hydratase, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region.


ensembl_gene_id: Deba_1093
symbol: Deba_1093
gene_biotype: protein_coding
description:
  Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: dma:DMR_05730 L-tartrate dehydratase alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; SPTR: C0GM93 Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha  [...]


ensembl_gene_id: Deba_1094
symbol: Deba_1094
gene_biotype: protein_coding
description:
  KEGG: mxa:MXAN_3189 hypothetical protein; SPTR: C1FJ82 Aspartate/tyrosine/aromatic aminotransferase; PFAM: Protein of unknown function (DUF493); Belongs to the UPF0250 family.


ensembl_gene_id: Deba_1096
symbol: Deba_1096
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: SPATA5L1; spermatogenesis associated 5-like 1; SPTR: C2CXF7 Putative uncharacterized protein.


ensembl_gene_id: Deba_1097
symbol: Deba_1097
gene_biotype: protein_coding
description:
  Patatin; InterPro IPR016035:IPR002641; KEGG: reu:Reut_A3434 patatin; PFAM: Patatin; SPTR: Q8Y3G7 Putative esterase of the alpha-beta hydrolase superfamily protein; PFAM: Patatin-like phospholipase.


ensembl_gene_id: Deba_1098
symbol: Deba_1098
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753:IPR018376; KEGG: dal:Dalk_0778 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: B8FHR6 Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_1099
symbol: Deba_1099
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR015424:IPR004839:IPR015421; KEGG: gme:Gmet_0487 L-threonine O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; SPTR: Q39YE4 L-threonine O-3-phosphate decarboxylase; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase.


ensembl_gene_id: Deba_1100
symbol: Deba_1100
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR011006:IPR009057:IPR001789:IPR002078:IPR 002197:IPR003593; KEGG: acp:A2cp1_0976 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: B8JEK1 Sensor protein; PFAM: Response regulator receiver domain; Sigma-54 interact [...]


ensembl_gene_id: Deba_1101
symbol: Deba_1101
gene_biotype: protein_coding
description:
  LIM zinc-binding protein; InterPro IPR001781; KEGG: dat:HRM2_33650 hypothetical protein; PFAM: LIM zinc-binding protein; SPTR: B2DD80 Putative uncharacterized protein; PFAM: LIM domain.


ensembl_gene_id: Deba_1103
symbol: Deba_1103
gene_biotype: protein_coding
description:
  MinD-related ATP-binding protein; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: bga:BG0748 MinD-related ATP-binding protein; SPTR: C0T1H1 ATP-binding protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_1104
symbol: Deba_1104
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cce:Ccel_0234 cadmium-translocating P-type ATPase; SPTR: B8I541 Cadmium-translocating P-type ATPase.


ensembl_gene_id: Deba_1105
symbol: Deba_1105
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1291; COGs: COG3370 conserved hypothetical protein; InterPro IPR009710; KEGG: dal:Dalk_4103 protein of unknown function DUF1291; PFAM: protein of unknown function DUF1291; SPTR: B8FM55 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family.


ensembl_gene_id: Deba_1106
symbol: Deba_1106
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: Deba_1107
symbol: Deba_1107
gene_biotype: protein_coding
description:
  COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123:IPR004552; KEGG: sat:SYN_01275 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Q2LQ66 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: Deba_1108
symbol: Deba_1108
gene_biotype: protein_coding
description:
  Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: sat:SYN_01274 cell division protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: Q2LQ67 Cell division protein; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.


ensembl_gene_id: Deba_1109
symbol: Deba_1109
gene_biotype: protein_coding
description:
  COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073:IPR012020; KEGG: dal:Dalk_0422 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: B8FH42 Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold.


ensembl_gene_id: Deba_1110
symbol: Deba_1110
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR006176:IPR006108:IPR 006180:IPR013328; KEGG: dal:Dalk_2639 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: B8FIU1 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Deba_1111
symbol: Deba_1111
gene_biotype: protein_coding
description:
  CoA-binding domain protein; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR016102:IPR016040:IPR003781; KEGG: dat:HRM2_21900 hypothetical protein; PFAM: CoA-binding domain protein; SPTR: C0QDM4 Putative uncharacterized protein; PFAM: CoA binding domain.


ensembl_gene_id: Deba_1112
symbol: Deba_1112
gene_biotype: protein_coding
description:
  ATP-grasp domain protein; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR013650:IPR011761; KEGG: dol:Dole_0137 ATP-grasp domain-containing protein; PFAM: ATP-grasp domain protein; SPTR: A8ZSN4 ATP-grasp domain protein; PFAM: ATP-grasp domain.


ensembl_gene_id: Deba_1113
symbol: Deba_1113
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198:IPR016040; KEGG: dal:Dalk_2964 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: B8FL19 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.


ensembl_gene_id: Deba_1114
symbol: Deba_1114
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753:IPR018376; KEGG: chy:CHY_1739 putative 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Q3ABC5 Putative 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_1115
symbol: Deba_1115
gene_biotype: protein_coding
description:
  COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: gsu:GSU0237 MaoC-like domain-containing protein; PFAM: MaoC domain protein dehydratase; PRIAM: Enoyl-CoA hydratase; SPTR: Q74GK9 MaoC-like domain protein; PFAM: MaoC like domain.


ensembl_gene_id: Deba_1116
symbol: Deba_1116
gene_biotype: protein_coding
description:
  L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: dsy:DSY3794 hypothetical protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: Q24QV9 Putative uncharacterized protein; PFAM: CoA-transferase family III.


ensembl_gene_id: Deba_1117
symbol: Deba_1117
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: Deba_1118
symbol: Deba_1118
gene_biotype: protein_coding
description:
  KEGG: pau:PA14_64420 hypothetical protein; SPTR: A8MSS4 Putative uncharacterized protein OGG1 (Fragment).


ensembl_gene_id: Deba_1119
symbol: Deba_1119
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nml:Namu_3183 glycosyl transferase family 2; SPTR: C8XC11 Glycosyl transferase family 2.


ensembl_gene_id: Deba_1120
symbol: Deba_1120
gene_biotype: protein_coding
description:
  PBS lyase HEAT domain protein repeat-containing protein; InterProIPR016024:IPR004155:IPR000357:IPR011989:IPR 000225; KEGG: mba:Mbar_A1826 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SPTR: A0ZHQ4 Putative uncharacterized protein; PFAM: PBS lyase HEAT-like repeat.


ensembl_gene_id: Deba_1121
symbol: Deba_1121
gene_biotype: protein_coding
description:
  COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dal:Dalk_0342 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C1SI40 Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.


ensembl_gene_id: Deba_1122
symbol: Deba_1122
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dal:Dalk_5103 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: D1JGD8 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1123
symbol: Deba_1123
gene_biotype: protein_coding
description:
  InterPro IPR016196:IPR011701; KEGG: amr:AM1_A0171 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ZKH8 Major facilitator superfamily transporter, putative; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Deba_1124
symbol: Deba_1124
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR009057:IPR000005:IPR018062:IPR012287:IPR 018060; KEGG: cyn:Cyan7425_2438 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: B8HXA5 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


