# geneInfo

ensembl_gene_id: Deba_1125
symbol: Deba_1125
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR020449:IPR009057:IPR000005:IPR018060; KEGG: dsa:Desal_2087 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C6BVU4 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Deba_1126
symbol: Deba_1126
gene_biotype: protein_coding
description:
  Methyltransferase type 12; InterPro IPR013217; KEGG: dae:Dtox_2658 O-methyltransferase family 2; PFAM: Methyltransferase type 12; SPTR: D1JGE4 Putative uncharacterized protein; PFAM: O-methyltransferase.


ensembl_gene_id: Deba_1127
symbol: Deba_1127
gene_biotype: protein_coding
description:
  COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dde:Dde_1600 receptor precursor-mostly Fe transport; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Q311J9 Receptor-mostly Fe transport; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor.


ensembl_gene_id: Deba_1129
symbol: Deba_1129
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Deba_1131
symbol: Deba_1131
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR010994:IPR003488; KEGG: rmr:Rmar_1985 DNA protecting protein DprA; PFAM: SMF family protein; SPTR: D0MKF5 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA.


ensembl_gene_id: Deba_1132
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: Deba_1133
symbol: Deba_1133
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: afw:Anae109_1649 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A7HAV7 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_1134
symbol: Deba_1134
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR001757:IPR001366:IPR008250:IPR005834:IPR 018303:IPR000150:IPR006404:IPR006416; KEGG: dma:DMR_28780 putative cation translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: C4XHJ5 Putative cation translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase [...]


ensembl_gene_id: Deba_1135
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Deba_1136
symbol: Deba_1136
gene_biotype: protein_coding
description:
  Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR006662:IPR012336:IPR013766:IPR017937:IPR 012335:IPR017936:IPR005746; KEGG: sfu:Sfum_1708 thioredoxin; PFAM: Thioredoxin domain; SPTR: A0LIZ3 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.


ensembl_gene_id: Deba_1137
symbol: Deba_1137
gene_biotype: protein_coding
description:
  COGs: COG0492 Thioredoxin reductase; InterPro IPR000103:IPR013027:IPR005982; KEGG: pth:PTH_1417 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A5D2B9 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.


ensembl_gene_id: Deba_1138
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Deba_1139
symbol: Deba_1139
gene_biotype: protein_coding
description:
  KEGG: dsa:Desal_2444 hypothetical protein; SPTR: C6BXX0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2867).


ensembl_gene_id: Deba_1140
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Deba_1141
symbol: recA
gene_biotype: protein_coding
description:
  recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Deba_1142
symbol: Deba_1142
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Deba_1143
symbol: Deba_1143
gene_biotype: protein_coding
description:
  Competence/damage-inducible protein CinA; COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR001453:IPR008136:IPR008135; KEGG: gme:Gmet_0196 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: C8QYB6 Competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybden [...]


ensembl_gene_id: Deba_1144
symbol: Deba_1144
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1178; COGs: COG5319 conserved hypothetical protein; InterPro IPR009562; KEGG: dal:Dalk_4330 protein of unknown function DUF1178; PFAM: protein of unknown function DUF1178; SPTR: B8FMH2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1178).


ensembl_gene_id: Deba_1145
symbol: Deba_1145
gene_biotype: protein_coding
description:
  Methyltransferase type 12; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: Deba_1146
symbol: Deba_1146
gene_biotype: protein_coding
description:
  COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746:IPR004809; KEGG: sat:SYN_01628 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Q2LXX3 Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.


ensembl_gene_id: Deba_1147
symbol: Deba_1147
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR011322:IPR015867; KEGG: drt:Dret_0112 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: C8WZD9 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Deba_1148
symbol: Deba_1148
gene_biotype: protein_coding
description:
  Ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR002229:IPR001905:IPR018047; KEGG: tnp:Tnap_0194 ammonium transporter; PFAM: ammonium transporter; SPTR: B1L988 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.


ensembl_gene_id: Deba_1149
symbol: Deba_1149
gene_biotype: protein_coding
description:
  InterPro IPR010239; KEGG: dol:Dole_0109 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C8QW49 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial.


ensembl_gene_id: Deba_1150
symbol: Deba_1150
gene_biotype: protein_coding
description:
  Transcriptional regulator, NifA subfamily, Fis Family; COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterProIPR020441:IPR009057:IPR003018:IPR002078:IPR 002197:IPR010113:IPR003593; KEGG: cts:Ctha_1655 transcriptional regulator, NifA, fis family; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; SPTR: Q8KC95 Nitrogen fixation specific regulatory protein nifA; TIGRFAM: Nif-specific regulatory protein; PFAM: GAF domain; Bacterial regulatory pro [...]


ensembl_gene_id: Deba_1151
symbol: Deba_1151
gene_biotype: protein_coding
description:
  Glutamate synthase, NADH/NADPH, small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR000759:IPR009051:IPR013027:IPR012285:IPR 016040:IPR006005; KEGG: mva:Mvan_5697 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A1TH12 Glutamate synthase (NADH) small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit.


ensembl_gene_id: Deba_1152
symbol: Deba_1152
gene_biotype: protein_coding
description:
  COGs: COG0069 Glutamate synthase domain 2; InterProIPR002489:IPR000583:IPR006982:IPR002932:IPR 013785:IPR017932; KEGG: ttr:Tter_0474 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: D1CEN9 Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.


ensembl_gene_id: Deba_1153
symbol: Deba_1153
gene_biotype: protein_coding
description:
  COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR000991:IPR017926; KEGG: cja:CJA_0967 conserved proteinconserved protein; PFAM: glutamine amidotransferase class-I; SPTR: B3PLE3 Conserved proteinconserved protein; PFAM: Glutamine amidotransferase class-I.


ensembl_gene_id: Deba_1154
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Deba_1155
symbol: Deba_1155
gene_biotype: protein_coding
description:
  Protein of unknown function DUF128; COGs: COG1693 conserved hypothetical protein; InterPro IPR013668:IPR002846:IPR000169; KEGG: sat:SYN_03243 putative cytoplasmic protein; PFAM: Protein of unknown function DUF128; Ribonuclease R winged-helix domain protein; SPTR: Q2LQG6 Hypothetical cytosolic protein; PFAM: Domain of unknown function DUF128; Ribonuclease R winged-helix domain.


ensembl_gene_id: Deba_1156
symbol: Deba_1156
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ppf:Pput_2024 outer membrane porin; SPTR: C0FB13 Putative uncharacterized protein.


ensembl_gene_id: Deba_1157
symbol: Deba_1157
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: gau:GAU_1166 putative NtrC family two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C1A7J8 Putative NtrC family two-component response regulator; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_1158
symbol: Deba_1158
gene_biotype: protein_coding
description:
  COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: sfu:Sfum_0288 4-hydroxybenzoate polyprenyltransferase, putative; PFAM: UbiA prenyltransferase; SPTR: A0LEY7 4-hydroxybenzoate polyprenyltransferase, putative; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: Deba_1159
symbol: Deba_1159
gene_biotype: protein_coding
description:
  UbiD family decarboxylase; COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: hmo:HM1_1945 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative; PFAM: Carboxylyase-related protein; SPTR: B0TFS3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; Belongs to the UbiD family.


ensembl_gene_id: Deba_1160
symbol: Deba_1160
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR011006:IPR009082:IPR 011620:IPR013655:IPR013656:IPR013767:IPR003661:IPR001789:I PR005467:IPR000014:IPR000700:IPR001610; KEGG: cyn:Cyan7425_3579 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein [...]


ensembl_gene_id: Deba_1161
symbol: Deba_1161
gene_biotype: protein_coding
description:
  SMC domain protein; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395:IPR018271; KEGG: reh:H16_B0196 DNA repair exonuclease, SbcC; PFAM: SMC domain protein; SPTR: Q0K4S7 DNA repair exonuclease, SbcC; TIGRFAM: exonuclease SbcC.


ensembl_gene_id: Deba_1162
symbol: sbcD
gene_biotype: protein_coding
description:
  Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: Deba_1163
symbol: Deba_1163
gene_biotype: protein_coding
description:
  COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR011650:IPR002933:IPR010182; KEGG: dvm:DvMF_0550 diaminopimelate aminotransferase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: B8DKS8 Peptidase M20; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.


ensembl_gene_id: Deba_1165
symbol: ispH
gene_biotype: protein_coding
description:
  Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: Deba_1166
symbol: Deba_1166
gene_biotype: protein_coding
description:
  Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Deba_1167
symbol: Deba_1167
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0731 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: hha:Hhal_2049 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C8R0D6 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_1168
symbol: Deba_1168
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1555; InterPro IPR011449:IPR013424; KEGG: pat:Patl_1971 agarase; PFAM: protein of unknown function DUF1555; SPTR: B9ZJM7 Putative uncharacterized protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain.


ensembl_gene_id: Deba_1169
symbol: Deba_1169
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: dsy:DSY4797 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q24N06 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Deba_1170
symbol: Deba_1170
gene_biotype: protein_coding
description:
  COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: dds:Ddes_2195 cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; SPTR: B8J446 Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB).


ensembl_gene_id: Deba_1171
symbol: Deba_1171
gene_biotype: protein_coding
description:
  COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: sfu:Sfum_0339 cytochrome bd ubiquinol oxidase, subunit I; PFAM: cytochrome bd ubiquinol oxidase subunit I; SPTR: A0LF37 Cytochrome bd ubiquinol oxidase, subunit I; PFAM: Bacterial Cytochrome Ubiquinol Oxidase.


ensembl_gene_id: Deba_1172
symbol: Deba_1172
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006092:IPR006091:IPR 006090:IPR013786:IPR013764; KEGG: scl:sce3575 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: A9GS62 Butyryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_1173
symbol: Deba_1173
gene_biotype: protein_coding
description:
  Putative signal transduction protein with CBS domains; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: pth:PTH_2126 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: A5D0B8 FOG: CBS domain; PFAM: CBS domain.


ensembl_gene_id: Deba_1174
symbol: Deba_1174
gene_biotype: protein_coding
description:
  Methyltransferase FkbM family; InterPro IPR006342; KEGG: cyt:cce_0521 hypothetical protein; SPTR: B5JGB3 Methyltransferase, FkbM family protein; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family.


ensembl_gene_id: Deba_1175
symbol: Deba_1175
gene_biotype: protein_coding
description:
  Alpha-2-macroglobulin domain protein; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR008930:IPR002890:IPR011625:IPR001599; KEGG: acp:A2cp1_1926 alpha-2-macroglobulin domain protein; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin; SPTR: B8J778 Alpha-2-macroglobulin domain protein; PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain.


ensembl_gene_id: Deba_1176
symbol: Deba_1176
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterProIPR012338:IPR001264:IPR001460:IPR009647:IPR 011815; KEGG: ade:Adeh_2036 glycosyl transferase family penicillin-binding protein transpeptidase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Q2IJH6 Glycosyl transferase, family 51 / Penicillin-binding protein, transpeptidase; TIGRFAM: penicillin-binding protein 1C; PFAM: Penicillin-Binding Protein C-terminus Fami [...]


ensembl_gene_id: Deba_1177
symbol: Deba_1177
gene_biotype: protein_coding
description:
  COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR001451; KEGG: sfu:Sfum_2682 serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM: Serine O-acetyltransferase; SPTR: A0LLQ8 Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase.


ensembl_gene_id: Deba_1178
symbol: Deba_1178
gene_biotype: protein_coding
description:
  COGs: COG0031 Cysteine synthase; InterPro IPR001926:IPR005856:IPR005859; KEGG: dal:Dalk_2651 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: B8FIV3 Cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases.


ensembl_gene_id: Deba_1180
symbol: Deba_1180
gene_biotype: protein_coding
description:
  2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: ttu:TERTU_0169 putative 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase; SPTR: C5BLF2 Putative 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase; Belongs to the ComB family.


ensembl_gene_id: Deba_1181
symbol: Deba_1181
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR000653:IPR015421:IPR015422; KEGG: bsu:BSU37890 putative glutamine-dependent sugar transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: P39623 Spore coat polysaccharide biosynthesis protein spsC; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Deba_1182
symbol: Deba_1182
gene_biotype: protein_coding
description:
  COGs: COG1787 endonuclease distantly related to Holliday junction resolvase and Mrr-like restriction enzyme; InterPro IPR011335:IPR007560; KEGG: bbe:BBR47_35100 hypothetical protein; PFAM: restriction endonuclease; SPTR: C0ZFC8 Putative uncharacterized protein; PFAM: Restriction endonuclease.


ensembl_gene_id: Deba_1183
symbol: Deba_1183
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hmo:HM1_2365 acetoin utilization protein, subunit A; SPTR: B0TIH4 Acetoin utilization protein, subunit a.


ensembl_gene_id: Deba_1184
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: Deba_1185
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: Deba_1186
symbol: Deba_1186
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mba:Mbar_A2392 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Q469Y0 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1188
symbol: Deba_1188
gene_biotype: protein_coding
description:
  KEGG: ppd:Ppro_1941 hypothetical protein; SPTR: A1AQD0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1329).


ensembl_gene_id: Deba_1189
symbol: Deba_1189
gene_biotype: protein_coding
description:
  COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: ppd:Ppro_1940 RND efflux transporter; SPTR: A1AQC9 Exporters of the RND superfamily; PFAM: MMPL family.


ensembl_gene_id: Deba_1190
symbol: Deba_1190
gene_biotype: protein_coding
description:
  InterPro IPR000835:IPR011991; KEGG: ppd:Ppro_1939 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A1AQC8 Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Deba_1191
symbol: Deba_1191
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR003881:IPR000868; KEGG: dae:Dtox_2831 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: C8W1X5 Isochorismatase hydrolase; PFAM: Isochorismatase family.


ensembl_gene_id: Deba_1192
symbol: Deba_1192
gene_biotype: protein_coding
description:
  KEGG: rpb:RPB_2177 hypothetical protein; SPTR: Q2IY27 Putative uncharacterized protein; PFAM: Secretory lipase.


ensembl_gene_id: Deba_1193
symbol: Deba_1193
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: tgr:Tgr7_1963 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q1NWX2 Chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_1194
symbol: Deba_1194
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: gvi:glr2042 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Q7NIZ0 Glr2042 protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1195
symbol: Deba_1195
gene_biotype: protein_coding
description:
  Cobalamin synthesis protein P47K; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003495:IPR012202; KEGG: ppd:Ppro_0345 cobalamin synthesis protein, P47K; PFAM: cobalamin synthesis protein P47K; SPTR: A1AKV9 Cobalamin synthesis protein, P47K; PFAM: CobW/HypB/UreG, nucleotide-binding domain.


ensembl_gene_id: Deba_1196
symbol: Deba_1196
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: mja:MJ0121 sn-glycerol-3-phosphate transport ATP-binding protein (UgpC); PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q57585 Uncharacterized ABC transporter ATP-binding protein MJ0121.


ensembl_gene_id: Deba_1197
symbol: Deba_1197
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: swo:Swol_1685 ABC-type Fe3+ transport system periplasmic component-like protein; SPTR: Q0AWC1 ABC-type Fe3+ transport system periplasmic component-like protein.


ensembl_gene_id: Deba_1198
symbol: Deba_1198
gene_biotype: protein_coding
description:
  TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531:IPR018181; KEGG: dat:HRM2_08940 TonB-dependent outer-membrane uptake protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: C0QKD6 TonB-dependent outer-membrane uptake protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.


ensembl_gene_id: Deba_1199
symbol: Deba_1199
gene_biotype: protein_coding
description:
  KEGG: pca:Pcar_0857 ABC-type transport system, periplasmic component; SPTR: Q3A695 ABC-type transport system, periplasmic component.


ensembl_gene_id: Deba_1200
symbol: Deba_1200
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: pca:Pcar_0856 ABC-type transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q3A696 ABC-type transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Deba_1201
symbol: Deba_1201
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: pca:Pcar_0855 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q3A697 ABC-type transport system, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Deba_1202
symbol: Deba_1202
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger; COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR016040:IPR006153:IPR006037; KEGG: dge:Dgeo_0222 potassium/proton antiporter; PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; SPTR: Q1J1V9 Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family; TrkA-C domain.


ensembl_gene_id: Deba_1203
symbol: Deba_1203
gene_biotype: protein_coding
description:
  KEGG: dsa:Desal_1384 hypothetical protein; SPTR: C6BRK6 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043.


ensembl_gene_id: Deba_1204
symbol: Deba_1204
gene_biotype: protein_coding
description:
  Small multidrug resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: bbr:BB3914 putative membrane transport protein; PFAM: small multidrug resistance protein; SPTR: C0N1Z3 Multidrug resistance protein, SMR family; manually curated; PFAM: Small Multidrug Resistance protein.


ensembl_gene_id: Deba_1205
symbol: Deba_1205
gene_biotype: protein_coding
description:
  Pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR020103:IPR002942:IPR006145:IPR018496:IPR 000748; KEGG: adg:Adeg_1292 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: C9R7X1 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Deba_1206
symbol: Deba_1206
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Deba_1207
symbol: Deba_1207
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Deba_1208
symbol: Deba_1208
gene_biotype: protein_coding
description:
  Peptidase M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: dps:DP0062 hypothetical protein; PFAM: peptidase M50; SPTR: Q6ASD4 Conserved hypothetical membrane protein; PFAM: Peptidase family M50.


ensembl_gene_id: Deba_1209
symbol: Deba_1209
gene_biotype: protein_coding
description:
  Polynucleotide adenylyltransferase region; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR001667:IPR003156:IPR000644:IPR002646; KEGG: sfu:Sfum_0679 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; CBS domain containing protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: CBS domain containing protein; SPTR: A0LG26 Polynucleotide adenylyltransferase region; PFAM: DHH family; DHHA1 domain; CBS domain; Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Deba_1210
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Deba_1211
symbol: Deba_1211
gene_biotype: protein_coding
description:
  Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR001714:IPR000994:IPR000587; KEGG: sfu:Sfum_0169 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Q1NY97 Peptidase M24; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.


ensembl_gene_id: Deba_1212
symbol: Deba_1212
gene_biotype: protein_coding
description:
  Putative sigma54 specific transcriptional regulator; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR003593; KEGG: aav:Aave_0172 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; SPTR: A1TIJ6 Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Sigma-54 interaction domain.


ensembl_gene_id: Deba_1213
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Deba_1214
symbol: Deba_1214
gene_biotype: protein_coding
description:
  COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: glo:Glov_2032 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B3E3C9 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Deba_1215
symbol: Deba_1215
gene_biotype: protein_coding
description:
  COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sat:SYN_01341 oligopeptide transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C6MN67 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Deba_1216
symbol: Deba_1216
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: sat:SYN_00608 oligopeptide-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Q2LVZ1 Oligopeptide-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.


ensembl_gene_id: Deba_1217
symbol: Deba_1217
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: gsu:GSU2525 nitroreductase family protein; PFAM: nitroreductase; SPTR: Q74A65 Nitroreductase family protein; PFAM: Nitroreductase family.


ensembl_gene_id: Deba_1219
symbol: Deba_1219
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Deba_1220
symbol: Deba_1220
gene_biotype: protein_coding
description:
  Phage SPO1 DNA polymerase-related protein; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122:IPR005273; KEGG: hoh:Hoch_5015 phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; SPTR: D0LVE3 Phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4.


ensembl_gene_id: Deba_1221
symbol: Deba_1221
gene_biotype: protein_coding
description:
  Protein of unknown function DUF107; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: tye:THEYE_A0592 membrane-bound serine protease; PFAM: protein of unknown function DUF107; SPTR: B5YJM0 Membrane-bound serine protease; PFAM: Clp protease; NfeD-like.


ensembl_gene_id: Deba_1222
symbol: Deba_1222
gene_biotype: protein_coding
description:
  Band 7 protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR001972; KEGG: sfu:Sfum_0464 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: A0LFG2 SPFH domain, Band 7 family protein; PFAM: SPFH domain / Band 7 family.


ensembl_gene_id: Deba_1223
symbol: Deba_1223
gene_biotype: protein_coding
description:
  KEGG: dal:Dalk_0401 hypothetical protein; SPTR: B8FH22 Putative uncharacterized protein; PFAM: Rho termination factor, N-terminal domain.


ensembl_gene_id: Deba_1224
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Deba_1225
symbol: Deba_1225
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003594:IPR011006; KEGG: lic:LIC11110 histidine kinase response regulator hybrid protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; SPTR: Q8F227 Two-component hybrid sensor and regulator; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Deba_1226
symbol: Deba_1226
gene_biotype: protein_coding
description:
  COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001789:IPR010822:IPR001932:IPR011006; KEGG: hmo:HM1_2362 response regulator receiver modulated serine phosphatase; PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; SPTR: B0TIH1 Response regulator receiver modulated serine phosphatase; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).


ensembl_gene_id: Deba_1227
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Deba_1228
symbol: cheD
gene_biotype: protein_coding
description:
  CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Deba_1229
symbol: Deba_1229
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: Deba_1230
symbol: Deba_1230
gene_biotype: protein_coding
description:
  CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR008207:IPR002545; KEGG: dba:Dbac_0868 CheA signal transduction histidine kinase; PFAM: CheW domain protein; Hpt domain protein; SMART: CheW domain protein; Hpt domain protein; SPTR: C7LPE3 CheA signal transduction histidine kinase; PFAM: CheW-like domain; Hpt domain.


ensembl_gene_id: Deba_1231
symbol: Deba_1231
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR004105:IPR003594:IPR002545:IPR 005467:IPR004358:IPR009082; KEGG: xom:XOO_2693 chemotaxis protein; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SPTR: Q2P1X9 Chemotaxis protein; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing [...]


ensembl_gene_id: Deba_1232
symbol: Deba_1232
gene_biotype: protein_coding
description:
  COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: hor:Hore_22620 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8D0S1 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_1233
symbol: Deba_1233
gene_biotype: protein_coding
description:
  Putative anti-anti-sigma factor; InterPro IPR002645; KEGG: xca:xccb100_1462 putative anti-anti-sigma factor; SPTR: Q8P7B2 Putative uncharacterized protein.


ensembl_gene_id: Deba_1234
symbol: Deba_1234
gene_biotype: protein_coding
description:
  Anti-sigma-factor antagonist; InterPro IPR002645; KEGG: pca:Pcar_1874 anti-anti-sigma regulatory factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Q1NPE5 Sulfate transporter/antisigma-factor antagonist STAS; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.


ensembl_gene_id: Deba_1235
symbol: Deba_1235
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; InterPro IPR009875; KEGG: hypothetical protein; PFAM: type IV pilus assembly PilZ; SPTR: C3Y8B3 Putative uncharacterized protein; PFAM: PilZ domain.


ensembl_gene_id: Deba_1236
symbol: Deba_1236
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: dat:HRM2_28640 MotB2; PFAM: OmpA/MotB domain protein; SPTR: C0QJD9 MotB2; PFAM: OmpA family.


ensembl_gene_id: Deba_1237
symbol: Deba_1237
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898:IPR000540; KEGG: dma:DMR_12670 chemotaxis protein MotA; PFAM: MotA/TolQ/ExbB proton channel; SPTR: C0GN88 MotA/TolQ/ExbB proton channel; manually curated; PFAM: MotA/TolQ/ExbB proton channel family.


ensembl_gene_id: Deba_1238
symbol: Deba_1238
gene_biotype: protein_coding
description:
  Protein of unknown function DUF399; COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314:IPR001478; KEGG: sfu:Sfum_2732 hypothetical protein; PFAM: protein of unknown function DUF399; SMART: PDZ/DHR/GLGF domain protein; SPTR: A0LLV8 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF399; PDZ domain (Also known as DHR or GLGF).


ensembl_gene_id: Deba_1239
symbol: Deba_1239
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: sat:SYN_00940 peptidoglycan-specific endopeptidase, M23 family; PFAM: Peptidase M23; SPTR: Q1NUT6 Peptidase M23B; PFAM: Peptidase family M23.


ensembl_gene_id: Deba_1240
symbol: Deba_1240
gene_biotype: protein_coding
description:
  Transferase hexapeptide repeat protein; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451:IPR011004; KEGG: ank:AnaeK_1516 transferase hexapeptide repeat protein; SPTR: B4UK37 Transferase hexapeptide repeat protein; manually curated.


ensembl_gene_id: Deba_1242
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Deba_1243
symbol: rpmB
gene_biotype: protein_coding
description:
  COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: dal:Dalk_2403 ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: C7LSI8 Ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: Deba_1244
symbol: Deba_1244
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Deba_1245
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: Deba_1246
symbol: ispG
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: Deba_1247
symbol: Deba_1247
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cma:Cmaq_0628 alpha-L-glutamate ligase; SPTR: A8MCG3 Alpha-L-glutamate ligase, RimK family.


ensembl_gene_id: Deba_1248
symbol: Deba_1248
gene_biotype: protein_coding
description:
  Protein of unknown function DUF523; COGs: COG1683 conserved hypothetical protein; InterPro IPR007553; KEGG: sth:STH1078 hypothetical protein; PFAM: protein of unknown function DUF523; SPTR: Q67QI0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF523).


ensembl_gene_id: Deba_1249
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR000728:IPR010918:IPR004733:IPR016188; KEGG: pca:Pcar_1293 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Q3A515 Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosp [...]


ensembl_gene_id: Deba_1250
symbol: Deba_1250
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1592 Rubrerythrin; InterProIPR003251:IPR004039:IPR009040:IPR012347:IPR 009078; KEGG: sat:SYN_00469 rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: Q2LUY1 Rubrerythrin; PFAM: Rubrerythrin.


ensembl_gene_id: Deba_1251
symbol: tpx
gene_biotype: protein_coding
description:
  Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: Deba_1253
symbol: Deba_1253
gene_biotype: protein_coding
description:
  InterPro IPR001647:IPR012287:IPR009057; KEGG: cmi:CMM_0286 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A6FY19 Putative TetR-family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_1254
symbol: Deba_1254
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR000169:IPR016040; KEGG: drt:Dret_1322 NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C8X2G3 NmrA family protein; PFAM: Protein of unknown function (DUF2867); NmrA-like family.


ensembl_gene_id: Deba_1255
symbol: Deba_1255
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dde:Dde_0384 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C0GLF0 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_1257
symbol: Deba_1257
gene_biotype: protein_coding
description:
  COGs: COG5587 conserved hypothetical protein; InterPro IPR012808:IPR015996; KEGG: sun:SUN_1370 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: B6BL81 Putative uncharacterized protein; PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: conserved hypothetical protein TIGR02453.


ensembl_gene_id: Deba_1258
symbol: Deba_1258
gene_biotype: protein_coding
description:
  COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR015590:IPR001670:IPR018211:IPR016160:IPR 016162:IPR016161; KEGG: dal:Dalk_3586 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; iron-containing alcohol dehydrogenase; SPTR: B8FGP4 Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase.


ensembl_gene_id: Deba_1259
symbol: Deba_1259
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: pmy:Pmen_1368 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A4XS17 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.


ensembl_gene_id: Deba_1264
symbol: Deba_1264
gene_biotype: protein_coding
description:
  FeoA family protein; COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167:IPR008988; KEGG: dvm:DvMF_1016 FeoA family protein; PFAM: FeoA family protein; SPTR: B8DPR4 FeoA family protein; PFAM: FeoA domain.


ensembl_gene_id: Deba_1265
symbol: Deba_1265
gene_biotype: protein_coding
description:
  KEGG: dba:Dbac_1912 hypothetical protein; SPTR: C7LXD2 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325).


ensembl_gene_id: Deba_1266
symbol: Deba_1266
gene_biotype: protein_coding
description:
  Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR011991:IPR000835:IPR001808; KEGG: sfu:Sfum_3768 DtxR family iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; regulatory protein Crp; regulatory protein MarR; SPTR: A0LPT5 Iron (Metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.


ensembl_gene_id: Deba_1267
symbol: Deba_1267
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, ATPase subunit; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: Deba_1268
symbol: Deba_1268
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Deba_1269
symbol: Deba_1269
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter, periplasmic molybdate-binding protein; COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR006059:IPR010916:IPR005950; KEGG: dat:HRM2_09850 ModA4; PFAM: extracellular solute-binding protein family 1; SPTR: C0QL11 ModA4; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein.


ensembl_gene_id: Deba_1272
symbol: Deba_1272
gene_biotype: protein_coding
description:
  COGs: COG5345 conserved hypothetical protein; InterPro IPR016936; KEGG: kko:Kkor_0593 hypothetical protein; PFAM: Uncharacterised conserved protein UCP029693; SPTR: C0N6C1 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2333).


ensembl_gene_id: Deba_1273
symbol: Deba_1273
gene_biotype: protein_coding
description:
  rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: Deba_1274
symbol: Deba_1274
gene_biotype: protein_coding
description:
  COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: ajs:Ajs_3540 ComF family protein; PFAM: phosphoribosyltransferase; SPTR: A1WBM8 ComF family protein; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.


ensembl_gene_id: Deba_1275
symbol: Deba_1275
gene_biotype: protein_coding
description:
  COGs: COG0538 Isocitrate dehydrogenase; InterPro IPR001804:IPR019818; KEGG: dol:Dole_1908 isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: A8ZSH5 Isocitrate dehydrogenase [NADP]; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type.


ensembl_gene_id: Deba_1276
symbol: Deba_1276
gene_biotype: protein_coding
description:
  InterPro IPR005358; KEGG: drt:Dret_1006 protein of unknown function UPF0153; PFAM: protein of unknown function UPF0153; SPTR: C8X1J7 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).


ensembl_gene_id: Deba_1277
symbol: Deba_1277
gene_biotype: protein_coding
description:
  COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286:IPR003084; KEGG: gme:Gmet_1739 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Q39UV4 Histone deacetylase superfamily; PFAM: Histone deacetylase domain.


ensembl_gene_id: Deba_1278
symbol: Deba_1278
gene_biotype: protein_coding
description:
  COGs: COG1610 conserved hypothetical protein; InterPro IPR019004:IPR003789; KEGG: fre:Franean1_0338 hypothetical protein; PFAM: Protein of unknown function; SPTR: A8LF59 Putative uncharacterized protein; PFAM: Yqey-like protein.


ensembl_gene_id: Deba_1279
symbol: mutS2
gene_biotype: protein_coding
description:
  Smr protein/MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: Deba_1280
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Deba_1281
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Deba_1282
symbol: Deba_1282
gene_biotype: protein_coding
description:
  COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR006261:IPR003607; KEGG: ade:Adeh_2590 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C8R019 Deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: Deba_1283
symbol: Deba_1283
gene_biotype: protein_coding
description:
  Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: dal:Dalk_0348 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: B8F925 Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family.


ensembl_gene_id: Deba_1284
symbol: Deba_1284
gene_biotype: protein_coding
description:
  Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: sat:SYN_00415 permease; PFAM: permease YjgP/YjgQ family protein; SPTR: Q2LSQ8 Permease; PFAM: Predicted permease YjgP/YjgQ family.


ensembl_gene_id: Deba_1285
symbol: Deba_1285
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR006089:IPR 013786:IPR013764:IPR009100:IPR009075; KEGG: dal:Dalk_3776 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B8FLV9 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_1286
symbol: Deba_1286
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR001387:IPR013096:IPR014710:IPR011051; KEGG: dal:Dalk_3777 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B8FLW0 Transcriptional regulator, XRE family; PFAM: Cupin domain; Helix-turn-helix.


ensembl_gene_id: Deba_1287
symbol: Deba_1287
gene_biotype: protein_coding
description:
  LAO/AO transport system ATPase; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129:IPR003593; KEGG: ppd:Ppro_0389 LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; SPTR: A1AL03 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase.


ensembl_gene_id: Deba_1288
symbol: Deba_1288
gene_biotype: protein_coding
description:
  COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: scl:sce0893 hypothetical protein; SPTR: A9ETY3 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_1289
symbol: Deba_1289
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: dol:Dole_2557 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A8ZWN0 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_1290
symbol: Deba_1290
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR013767:IPR003018:IPR013656:IPR 003661:IPR003594:IPR008207:IPR005467:IPR000014:IPR000700:I PR004358:IPR001610:IPR011006:IPR009082; KEGG: dvm:DvMF_1096 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain con [...]


ensembl_gene_id: Deba_1291
symbol: Deba_1291
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR006089:IPR 013786:IPR013764:IPR009100:IPR009075; KEGG: hoh:Hoch_3778 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: D0LYC8 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_1292
symbol: Deba_1292
gene_biotype: protein_coding
description:
  COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753:IPR018376; KEGG: chy:CHY_1601 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: C0GKR8 Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Deba_1293
symbol: Deba_1293
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: cbe:Cbei_0411 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A8U754 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Deba_1294
symbol: Deba_1294
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: dol:Dole_2187 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: A8ZUF9 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Deba_1295
symbol: Deba_1295
gene_biotype: protein_coding
description:
  COGs: COG2378 transcriptional regulator protein; KEGG: sat:SYN_02988 transcriptional regulator; SPTR: Q2LX17 Transcriptional regulator.


ensembl_gene_id: Deba_1296
symbol: Deba_1296
gene_biotype: protein_coding
description:
  ApbE family lipoprotein; COGs: COG2122 conserved hypothetical protein; InterPro IPR003374:IPR007183; KEGG: sfu:Sfum_2124 hypothetical protein; PFAM: ApbE family lipoprotein; SPTR: A0LK55 Putative uncharacterized protein; PFAM: ApbE family.


ensembl_gene_id: Deba_1297
symbol: Deba_1297
gene_biotype: protein_coding
description:
  Phosphodiesterase, MJ0936 family; COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: dal:Dalk_0913 phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; SPTR: Q2YZQ0 Putative uncharacterized protein; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family.


ensembl_gene_id: Deba_1298
symbol: Deba_1298
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: sfu:Sfum_2126 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: A0LK57 Histidine triad (HIT) protein; PFAM: HIT domain.


ensembl_gene_id: Deba_1299
symbol: Deba_1299
gene_biotype: protein_coding
description:
  KEGG: drt:Dret_1341 hypothetical protein; SPTR: C8X2I2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1049).


ensembl_gene_id: Deba_1300
symbol: lapB
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: Deba_1301
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Deba_1302
symbol: Deba_1302
gene_biotype: protein_coding
description:
  Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: drt:Dret_0142 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: C8WZG9 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes.


ensembl_gene_id: Deba_1303
symbol: Deba_1303
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: dvl:Dvul_0562 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Q727W0 High-affinity branched-chain amino acid ABC transporter, perisplasmic amino acid binding protein; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Deba_1304
symbol: Deba_1304
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dsa:Desal_2944 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C6C0P9 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_1305
symbol: Deba_1305
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dvm:DvMF_1164 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: B8DKF6 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_1306
symbol: Deba_1306
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dvm:DvMF_1163 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8DKF5 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.


ensembl_gene_id: Deba_1307
symbol: Deba_1307
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: dsa:Desal_2947 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6C0Q2 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Deba_1308
symbol: Deba_1308
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: bth:BT_1258 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C0D719 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_1309
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Deba_1311
symbol: Deba_1311
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR013656:IPR003661:IPR003594:IPR005467:IPR 000014:IPR004358:IPR009082; KEGG: cph:Cpha266_1787 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A1BHC7 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Deba_1312
symbol: Deba_1312
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR001387:IPR015927:IPR010982; KEGG: dvm:DvMF_1678 putative phage repressor; SMART: helix-turn-helix domain protein; SPTR: B8DLY0 Putative phage repressor.


ensembl_gene_id: Deba_1313
symbol: Deba_1313
gene_biotype: protein_coding
description:
  KEGG: tgr:Tgr7_1417 outer membrane protein domain-containing protein; SPTR: Q0YQX8 Putative uncharacterized protein.


ensembl_gene_id: Deba_1316
symbol: Deba_1316
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR017871:IPR003593; KEGG: ele:Elen_1434 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C8WH12 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Deba_1317
symbol: Deba_1317
gene_biotype: protein_coding
description:
  COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: ele:Elen_0314 cobalt transport protein; PFAM: cobalt transport protein; SPTR: D0YS34 Putative ABC transporter associated permease; PFAM: Cobalt transport protein.


ensembl_gene_id: Deba_1318
symbol: Deba_1318
gene_biotype: protein_coding
description:
  InterPro IPR011733; KEGG: ele:Elen_0322 hypothetical protein; PFAM: Conserved hypothetical CHP02185 integral membrane family protein; SPTR: C7HSW0 Membrane protein; PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep); TIGRFAM: conserved hypothetical integral membrane protein TIGR02185.


ensembl_gene_id: Deba_1319
symbol: Deba_1319
gene_biotype: protein_coding
description:
  COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dal:Dalk_0342 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: B8F919 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.


ensembl_gene_id: Deba_1320
symbol: Deba_1320
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR012287:IPR020449:IPR 009057; KEGG: gvi:glr0326 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Q7NNT4 AraC family transcriptional regulatory protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Deba_1321
symbol: Deba_1321
gene_biotype: protein_coding
description:
  Protein of unknown function DUF486; COGs: COG3169 conserved hypothetical protein; InterPro IPR007437; KEGG: dal:Dalk_4457 protein of unknown function DUF486; PFAM: protein of unknown function DUF486; SPTR: B8FCH3 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF486.


ensembl_gene_id: Deba_1322
symbol: Deba_1322
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: ote:Oter_0563 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: B1ZSJ6 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1323
symbol: Deba_1323
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR013656:IPR013767:IPR003661:IPR003594:IPR 001789:IPR005467:IPR000014:IPR000700:IPR004358:IPR003018:I PR001610:IPR011006:IPR009082; KEGG: dal:Dalk_0107 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; GAF domain protein; PAC repeat-containing protein; response  [...]


ensembl_gene_id: Deba_1324
symbol: Deba_1324
gene_biotype: protein_coding
description:
  Hypothetical protein; Contains Selenocysteine; KEGG: dma:DMR_38750 hypothetical protein; SPTR: C4XN63 Putative uncharacterized protein; manually curated; PFAM: DsrE/DsrF-like family.


ensembl_gene_id: Deba_1325
symbol: Deba_1325
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: Deba_1326
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoatehydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Deba_1327
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Deba_1328
symbol: Deba_1328
gene_biotype: protein_coding
description:
  Formiminotransferase-cyclodeaminase; COGs: COG3404 Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR007044; KEGG: hmo:HM1_1889 methenyltetrahydrofolate cyclohydrolase, putative; PFAM: Formiminotransferase-cyclodeaminase; SPTR: Q24UZ8 Putative uncharacterized protein; PFAM: Formiminotransferase-cyclodeaminase.


ensembl_gene_id: Deba_1329
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Deba_1330
symbol: Deba_1330
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tro:trd_1922 putative cadherin domain/calx-beta domain protein; SPTR: C1MN99 Predicted protein.


ensembl_gene_id: Deba_1332
symbol: Deba_1332
gene_biotype: protein_coding
description:
  Hydroxylamine oxidase; InterPro IPR011031; KEGG: sfu:Sfum_2550 hydroxylamine oxidase; SPTR: A0LLC6 Hydroxylamine oxidase.


ensembl_gene_id: Deba_1334
symbol: Deba_1334
gene_biotype: protein_coding
description:
  M6 family metalloprotease domain protein; InterProIPR008454:IPR008757:IPR018247:IPR018249:IPR 017683:IPR008969; KEGG: bbe:BBR47_51520 hypothetical protein; PFAM: peptidase M6 immune inhibitor A; Cna B domain protein; SPTR: C3AXM7 Secreted metalloprotease; TIGRFAM: M6 family metalloprotease domain protein; PFAM: Immune inhibitor A peptidase M6; TIGRFAM: M6 family metalloprotease domain.


ensembl_gene_id: Deba_1337
symbol: Deba_1337
gene_biotype: protein_coding
description:
  COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593; KEGG: mca:MCA1114 general secretion pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Q609W3 General secretion pathway protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E.


ensembl_gene_id: Deba_1338
symbol: Deba_1338
gene_biotype: protein_coding
description:
  Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076:IPR003004; KEGG: acr:Acry_0892 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: A0Z1L3 General secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Deba_1339
symbol: Deba_1339
gene_biotype: protein_coding
description:
  General secretion pathway protein G; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterProIPR012902:IPR013545:IPR001120:IPR000983:IPR 010054; KEGG: mca:MCA1116 general secretion pathway protein G; PFAM: type II secretion system protein G; SPTR: Q609W1 General secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Deba_1340
symbol: Deba_1340
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR012902:IPR001120; KEGG: eba:ebA1616 general secretion protein H; SPTR: Q5P6Q7 General secretion protein H; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Deba_1341
symbol: Deba_1341
gene_biotype: protein_coding
description:
  InterPro IPR012902:IPR001120; KEGG: ctt:CtCNB1_0632 general secretion pathway protein I; SPTR: B8KPH1 General secretion pathway protein I; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Deba_1342
symbol: Deba_1342
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR012902; KEGG: noc:Noc_0756 general secretion pathway protein J; SPTR: Q3JD27 General secretion pathway protein J; PFAM: Pseudopilin GspJ; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: Deba_1343
symbol: Deba_1343
gene_biotype: protein_coding
description:
  COGs: COG3156 Type II secretory pathway component PulK; KEGG: dat:HRM2_30150 GspK2; SPTR: C0QK72 GspK2; PFAM: General secretion pathway protein K.


ensembl_gene_id: Deba_1345
symbol: Deba_1345
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pol:Bpro_0175 17 kDa surface antigen; SPTR: Q12H52 17 kDa surface antigen.


ensembl_gene_id: Deba_1347
symbol: Deba_1347
gene_biotype: protein_coding
description:
  Peptidase A24A prepilin type IV; InterPro IPR000045; KEGG: bbr:BB0792 type 4 prepilin-like proteins leader peptide processing enzyme; PFAM: peptidase A24A prepilin type IV; SPTR: A3W196 Peptidase A24A-like; PFAM: Type IV leader peptidase family.


ensembl_gene_id: Deba_1348
symbol: Deba_1348
gene_biotype: protein_coding
description:
  General secretion pathway protein D; COGs: COG1450 Type II secretory pathway component PulD; InterProIPR005644:IPR004846:IPR004845:IPR001775:IPR 013356; KEGG: dat:HRM2_30110 GspD2; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: C5S7Y5 General secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D.


ensembl_gene_id: Deba_1352
symbol: Deba_1352
gene_biotype: protein_coding
description:
  Protein of unknown function DUF324; InterPro IPR005537; KEGG: syn:sll7066 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: Q6ZED2 Putative uncharacterized protein sll7066; PFAM: RAMP superfamily.


ensembl_gene_id: Deba_1353
symbol: Deba_1353
gene_biotype: protein_coding
description:
  Protein of unknown function DUF324; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: syn:sll7065 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: Q6ZED3 Putative uncharacterized protein sll7065; PFAM: RAMP superfamily.


ensembl_gene_id: Deba_1355
symbol: Deba_1355
gene_biotype: protein_coding
description:
  Protein of unknown function DUF324; InterPro IPR005537; KEGG: syn:sll7063 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: B5WA38 Putative uncharacterized protein; PFAM: RAMP superfamily.


ensembl_gene_id: Deba_1356
symbol: ectC
gene_biotype: protein_coding
description:
  Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.


ensembl_gene_id: Deba_1357
symbol: Deba_1357
gene_biotype: protein_coding
description:
  Diaminobutyrate/2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Deba_1358
symbol: ectA
gene_biotype: protein_coding
description:
  L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.


ensembl_gene_id: Deba_1359
symbol: Deba_1359
gene_biotype: protein_coding
description:
  COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR000634:IPR004450; KEGG: dal:Dalk_4397 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: B8FNA7 Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase.


ensembl_gene_id: Deba_1360
symbol: Deba_1360
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; InterPro IPR006683; KEGG: tye:THEYE_A0630 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: B5YJQ8 Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_1361
symbol: rlmH
gene_biotype: protein_coding
description:
  Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Deba_1362
symbol: Deba_1362
gene_biotype: protein_coding
description:
  ANTAR domain protein with unknown sensor; InterPro IPR005561:IPR011991:IPR011006; KEGG: gau:GAU_0397 two-component response regulator; PFAM: ANTAR domain protein; SPTR: C0GKN6 Response regulator receiver and ANTAR domain protein; PFAM: ANTAR domain.


ensembl_gene_id: Deba_1363
symbol: Deba_1363
gene_biotype: protein_coding
description:
  COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594; KEGG: tro:trd_0267 probable two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: B9KXS9 Probable two component sensor kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; HWE histidine kinase.


ensembl_gene_id: Deba_1364
symbol: Deba_1364
gene_biotype: protein_coding
description:
  COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: sat:SYN_02452 NifU-like domain-containing protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: C0GLY6 Nitrogen-fixing NifU domain protein; PFAM: NifU-like domain.


ensembl_gene_id: Deba_1365
symbol: purC
gene_biotype: protein_coding
description:
  COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR001636:IPR018236:IPR013816; KEGG: glo:Glov_3047 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: B3E940 Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: Deba_1366
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: Deba_1367
symbol: Deba_1367
gene_biotype: protein_coding
description:
  Phosphoesterase RecJ domain protein; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667; KEGG: dol:Dole_0370 phosphoesterase domain-containing protein; PFAM: phosphoesterase RecJ domain protein; SPTR: A8ZT16 Phosphoesterase RecJ domain protein; PFAM: DHH family.


ensembl_gene_id: Deba_1368
symbol: Deba_1368
gene_biotype: protein_coding
description:
  Conserved carboxylase region; COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891:IPR003379:IPR013785; KEGG: dat:HRM2_31800 Pcb; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; SPTR: C0QLF7 Pcb; PFAM: HMGL-like; Conserved carboxylase domain.


ensembl_gene_id: Deba_1369
symbol: Deba_1369
gene_biotype: protein_coding
description:
  Thioredoxin domain-containing protein; InterPro IPR012335:IPR012336; KEGG: sfu:Sfum_3604 thioredoxin domain-containing protein; SPTR: A0LPC2 Thioredoxin domain; PFAM: Thioredoxin.


ensembl_gene_id: Deba_1370
symbol: Deba_1370
gene_biotype: protein_coding
description:
  COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017:IPR009051; KEGG: dol:Dole_0768 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A8ZVB7 Putative uncharacterized protein; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_1371
symbol: Deba_1371
gene_biotype: protein_coding
description:
  FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR006094:IPR004113:IPR016166:IPR016167:IPR 016168:IPR016164; KEGG: dol:Dole_0769 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; SPTR: A8ZVB8 FAD linked oxidase domain protein; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain.


ensembl_gene_id: Deba_1372
symbol: Deba_1372
gene_biotype: protein_coding
description:
  COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017:IPR017900; KEGG: dol:Dole_0770 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A8ZVB9 Putative uncharacterized protein; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_1374
symbol: Deba_1374
gene_biotype: protein_coding
description:
  Metallophosphoesterase; InterPro IPR004843:IPR011152; KEGG: sfu:Sfum_2718 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: A0LLU4 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.


ensembl_gene_id: Deba_1375
symbol: Deba_1375
gene_biotype: protein_coding
description:
  COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442:IPR011460:IPR002052:IPR017441:IPR 008271:IPR000719:IPR020635:IPR002290:IPR011009; KEGG: dde:Dde_3468 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF1566; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Q30VN5 Serine/threonine protein kinase; PFAM: Protein kinase domain; Protein of unknown function (DUF1566).


ensembl_gene_id: Deba_1376
symbol: Deba_1376
gene_biotype: protein_coding
description:
  Flavoprotein WrbA; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR008254:IPR010089; KEGG: eba:ebA2303 TrpR binding protein WrbA; PFAM: flavodoxin/nitric oxide synthase; SPTR: Q5P5L5 Flavoprotein wrbA; TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV.


ensembl_gene_id: Deba_1379
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Deba_1380
symbol: Deba_1380
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: Deba_1381
symbol: Deba_1381
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterProIPR004839:IPR004838:IPR015421:IPR015422:IPR 015424; KEGG: sfu:Sfum_1219 aminotransferase, class I and II; PFAM: aminotransferase class I and II; SPTR: A0LHK9 Aminotransferase; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Deba_1382
symbol: Deba_1382
gene_biotype: protein_coding
description:
  COGs: COG0460 Homoserine dehydrogenase; InterProIPR005106:IPR001342:IPR002912:IPR019811:IPR 016204:IPR016040; KEGG: gsu:GSU1693 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; SPTR: Q74CI0 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain.


ensembl_gene_id: Deba_1383
symbol: Deba_1383
gene_biotype: protein_coding
description:
  Proposed homoserine kinase; COGs: COG3635 phosphoglycerate mutase AP superfamily; InterProIPR019304:IPR006124:IPR004456:IPR013371:IPR 017850; KEGG: pca:Pcar_1514 cofactor-independent phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: Q3A4E7 Phosphoglycerate mutase; TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme superfamily; TIGRFAM: 2,3-bisphosphoglycerate-inde [...]


ensembl_gene_id: Deba_1384
symbol: Deba_1384
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683:IPR006684; KEGG: ade:Adeh_1639 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; SPTR: Q2IID3 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051; tol-pal system-associated acyl-CoA thioesterase.


ensembl_gene_id: Deba_1385
symbol: Deba_1385
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterProIPR002192:IPR008279:IPR000121:IPR018274:IPR 010121:IPR013815:IPR013816:IPR015813; KEGG: gsu:GSU0580 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; PRIAM: Pyruvate, phosphate dikinase; SPTR: Q74FM6 Pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/py [...]


ensembl_gene_id: Deba_1386
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Deba_1388
symbol: Deba_1388
gene_biotype: protein_coding
description:
  Oxidoreductase molybdopterin binding protein; COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: afw:Anae109_4218 oxidoreductase molybdopterin binding; PFAM: oxidoreductase molybdopterin binding; SPTR: C0GHN9 Oxidoreductase molybdopterin binding; PFAM: Oxidoreductase molybdopterin binding domain.


ensembl_gene_id: Deba_1389
symbol: Deba_1389
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dal:Dalk_0799 beta-lactamase domain protein; SPTR: B8FHT7 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_1390
symbol: Deba_1390
gene_biotype: protein_coding
description:
  Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003660:IPR010822:IPR001932; KEGG: dae:Dtox_0924 protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; SPTR: C8W350 Protein serine/threonine phosphatase; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).


ensembl_gene_id: Deba_1391
symbol: Deba_1391
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1592 Rubrerythrin; KEGG: chy:CHY_0738 rubrerythrin; SPTR: D0Y5T7 Rubrerythrin.


ensembl_gene_id: Deba_1392
symbol: Deba_1392
gene_biotype: protein_coding
description:
  Response regulator receiver protein; InterProIPR001789:IPR001440:IPR013105:IPR019734:IPR 013026:IPR011990:IPR006597:IPR011006; KEGG: dat:HRM2_46700 TPR-repeat-containing protein with CheY-like receiver; PFAM: response regulator receiver; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: response regulator receiver; Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; SPTR: C0QGE7 TPR-repeat-containing protein with CheY-like receiver; PFAM: Response regulator receiver domain; Tetratricopeptide repeat.


ensembl_gene_id: Deba_1393
symbol: Deba_1393
gene_biotype: protein_coding
description:
  InterPro IPR015011; KEGG: sfu:Sfum_0182 hypothetical protein; SPTR: A0LEN2 Putative uncharacterized protein; PFAM: Archaea-specific editing domain of threonyl-tRNA synthetase.


ensembl_gene_id: Deba_1394
symbol: Deba_1394
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: dma:DMR_42640 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: C4XQM1 Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_1395
symbol: Deba_1395
gene_biotype: protein_coding
description:
  COGs: COG0469 Pyruvate kinase; InterProIPR015793:IPR015794:IPR015813:IPR001697:IPR 015795:IPR011037; KEGG: gau:GAU_1104 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Q1K4D5 Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.


ensembl_gene_id: Deba_1397
symbol: Deba_1397
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG1247 Sortase and related acyltransferase; InterPro IPR013216:IPR000182:IPR016181; KEGG: mma:MM_1902 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; Methyltransferase type 11; SPTR: Q8PVR0 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_1398
symbol: Deba_1398
gene_biotype: protein_coding
description:
  COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR011704:IPR003593; KEGG: adg:Adeg_0556 magnesium chelatase; PFAM: ATPase associated with various cellular activities AAA_5; PRIAM: Magnesium chelatase; SMART: AAA ATPase; SPTR: C9RBS7 Magnesium chelatase; PFAM: Magnesium chelatase, subunit ChlI.


ensembl_gene_id: Deba_1399
symbol: Deba_1399
gene_biotype: protein_coding
description:
  COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR000523:IPR002035:IPR003593; KEGG: dau:Daud_1209 magnesium chelatase; PFAM: von Willebrand factor type A; magnesium chelatase ChlI subunit; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; AAA ATPase; SPTR: B1I3V2 Magnesium chelatase; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain.


ensembl_gene_id: Deba_1400
symbol: Deba_1400
gene_biotype: protein_coding
description:
  COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137:IPR001821:IPR017909:IPR006311; KEGG: dal:Dalk_2275 hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: B8FIH8 Hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA).


ensembl_gene_id: Deba_1401
symbol: Deba_1401
gene_biotype: protein_coding
description:
  COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501:IPR018194; KEGG: dal:Dalk_2276 nickel-dependent hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: B8FIH9 Nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: Deba_1402
symbol: Deba_1402
gene_biotype: protein_coding
description:
  COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: sfu:Sfum_2951 hydrogenase expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A0LMH3 Hydrogenase expression/formation protein; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease.


ensembl_gene_id: Deba_1403
symbol: Deba_1403
gene_biotype: protein_coding
description:
  Hydrogenase assembly chaperone hypC/hupF; COGs: COG0298 Hydrogenase maturation factor; InterPro IPR001109; KEGG: dal:Dalk_2278 hydrogenase assembly chaperone HypC/HupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); SPTR: B8FII1 Hydrogenase assembly chaperone hypC/hupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF.


ensembl_gene_id: Deba_1404
symbol: Deba_1404
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: npu:Npun_CR034 XRE family transcriptional regulator; SPTR: B2JBS1 Transcriptional regulator, XRE family; PFAM: Nin one binding (NOB1) Zn-ribbon like.


ensembl_gene_id: Deba_1405
symbol: Deba_1405
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR002197:IPR003593:IPR 011006:IPR009057; KEGG: gur:Gura_2708 two component, sigma-54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: A5G514 Putative two component, sigma-54 specific, transcriptional regulator, Fis fa [...]


ensembl_gene_id: Deba_1407
symbol: Deba_1407
gene_biotype: protein_coding
description:
  COGs: COG0328 Ribonuclease HI; InterPro IPR002156:IPR012337; KEGG: mxa:MXAN_5728 ribonuclease H; PFAM: ribonuclease H; SPTR: Q098P5 RNase H; PFAM: RNase H.


ensembl_gene_id: Deba_1408
symbol: Deba_1408
gene_biotype: protein_coding
description:
  Protein of unknown function DUF164; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: sfu:Sfum_1209 hypothetical protein; PFAM: protein of unknown function DUF164; SPTR: A0LHK0 Putative uncharacterized protein; PFAM: Putative zinc ribbon domain.


ensembl_gene_id: Deba_1409
symbol: Deba_1409
gene_biotype: protein_coding
description:
  Protein of unknown function DUF34; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678:IPR017221:IPR011322; KEGG: sth:STH598 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Q67RW0 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: Deba_1410
symbol: Deba_1410
gene_biotype: protein_coding
description:
  COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: shi:Shel_26550 predicted TIM-barrel fold metal-dependent hydrolase; PFAM: amidohydrolase 2; SPTR: B0MKA2 Putative uncharacterized protein; manually curated; PFAM: Amidohydrolase.


ensembl_gene_id: Deba_1411
symbol: Deba_1411
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR018212:IPR004090; KEGG: drt:Dret_2373 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: C8X5F8 Methyl-accepting chemotaxis sensory transducer; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_1412
symbol: leuS
gene_biotype: protein_coding
description:
  COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR015945:IPR013155:IPR001412:IPR014729:IPR 002302:IPR009008:IPR009080; KEGG: glo:Glov_2116 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; Arginyl-tRNA synthetase, class Ic, core; SPTR: B3E3L3 Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Deba_1414
symbol: Deba_1414
gene_biotype: protein_coding
description:
  COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372:IPR005790:IPR008921; KEGG: gur:Gura_3132 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; SPTR: A5G675 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit.


ensembl_gene_id: Deba_1416
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: Deba_1418
symbol: Deba_1418
gene_biotype: protein_coding
description:
  COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR008258:IPR000189; KEGG: drm:Dred_2511 lytic transglycosylase, catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: A4J7G8 Lytic transglycosylase, catalytic; PFAM: Transglycosylase SLT domain.


ensembl_gene_id: Deba_1419
symbol: Deba_1419
gene_biotype: protein_coding
description:
  Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: ade:Adeh_3846 microcin-processing peptidase 2; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Q2IGA1 Putative uncharacterized protein; PFAM: Putative modulator of DNA gyrase.


ensembl_gene_id: Deba_1420
symbol: Deba_1420
gene_biotype: protein_coding
description:
  Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: afw:Anae109_3957 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: A7HHD9 Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase.


ensembl_gene_id: Deba_1421
symbol: Deba_1421
gene_biotype: protein_coding
description:
  KEGG: dps:DP0712 hypothetical protein; SPTR: Q6AQD2 Putative uncharacterized protein; PFAM: Putative exonuclease, RdgC.


ensembl_gene_id: Deba_1423
symbol: Deba_1423
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: GPRMTHL1; methuselah-like (AGAP006215-PA); SPTR: Q7PNU0 Methuselah-like (AGAP006215-PA).


ensembl_gene_id: Deba_1426
symbol: hisB
gene_biotype: protein_coding
description:
  COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807:IPR020565:IPR020568; KEGG: gyc:GYMC61_3155 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: C9RV81 Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase.


ensembl_gene_id: Deba_1428
symbol: hisA
gene_biotype: protein_coding
description:
  COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006062:IPR013785:IPR006063:IPR011060; KEGG: avn:Avin_04620 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Q0EX95 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: H [...]


ensembl_gene_id: Deba_1429
symbol: Deba_1429
gene_biotype: protein_coding
description:
  InterPro IPR007202; KEGG: dae:Dtox_3052 Fe-S cluster domain protein; PFAM: Fe-S cluster domain protein; SPTR: C8W3L8 Fe-S cluster domain protein; PFAM: Putative Fe-S cluster.


ensembl_gene_id: Deba_1430
symbol: Deba_1430
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: sfu:Sfum_0112 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A0LEG3 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.


ensembl_gene_id: Deba_1431
symbol: Deba_1431
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR001140:IPR003439:IPR017871:IPR017940:IPR 003593:IPR011527; KEGG: dal:Dalk_3747 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: B8FLT0 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Deba_1432
symbol: Deba_1432
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR001140:IPR003439:IPR017871:IPR017940:IPR 003593:IPR011527; KEGG: dal:Dalk_3748 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: B8FLT1 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Deba_1433
symbol: Deba_1433
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR000866:IPR017936:IPR012335:IPR012336; KEGG: rmr:Rmar_1898 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: D0MJX3 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family.


ensembl_gene_id: Deba_1434
symbol: Deba_1434
gene_biotype: protein_coding
description:
  COGs: COG0557 Exoribonuclease R; InterPro IPR001900; KEGG: dal:Dalk_3638 exoribonuclease II; PFAM: ribonuclease II; PRIAM: Exoribonuclease II; SPTR: B8FGU6 Exoribonuclease II; PFAM: RNB domain; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases.


ensembl_gene_id: Deba_1435
symbol: Deba_1435
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576:IPR012349:IPR009002; KEGG: dma:DMR_07650 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C4XJ92 Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Deba_1436
symbol: Deba_1436
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; KEGG: csa:Csal_2123 glycosyl transferase, group 1; SPTR: A6G2P4 Glycosyl transferase, group 1; manually curated; PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF3524).


ensembl_gene_id: Deba_1437
symbol: Deba_1437
gene_biotype: protein_coding
description:
  Bifunctional GlmU protein; COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR001451:IPR011004; KEGG: dps:DP2923 bifunctional GlmU protein; SPTR: C0GCM6 Bifunctional GlmU protein.


ensembl_gene_id: Deba_1438
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Deba_1439
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Deba_1440
symbol: Deba_1440
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR001440:IPR019734:IPR013026:IPR011990; KEGG: dsa:Desal_2816 tetratricopeptide TPR_2 repeat protein; PFAM: TPR repeat-containing protein; SPTR: C6BZZ7 Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat.


ensembl_gene_id: Deba_1441
symbol: Deba_1441
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: bcv:Bcav_2296 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C5BVU6 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Deba_1442
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Deba_1443
symbol: Deba_1443
gene_biotype: protein_coding
description:
  Protein of unknown function DUF218; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: pwa:Pecwa_2047 protein of unknown function DUF218; PFAM: protein of unknown function DUF218; SPTR: D0KBS4 Putative uncharacterized protein; PFAM: DUF218 domain.


ensembl_gene_id: Deba_1444
symbol: Deba_1444
gene_biotype: protein_coding
description:
  H+transporting two-sector ATPase E subunit; InterPro IPR002842; KEGG: bfs:BF2749 putative V-type ATP synthase subunit E; PFAM: H+transporting two-sector ATPase E subunit; SPTR: D0TNN5 ATP synthase subunit E.


ensembl_gene_id: Deba_1445
symbol: Deba_1445
gene_biotype: protein_coding
description:
  KEGG: bth:BT_1300 hypothetical protein; SPTR: A7V2L2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2764).


ensembl_gene_id: Deba_1446
symbol: atpA-2
gene_biotype: protein_coding
description:
  H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Deba_1447
symbol: atpB
gene_biotype: protein_coding
description:
  H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: Deba_1448
symbol: Deba_1448
gene_biotype: protein_coding
description:
  COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: fsu:Fisuc_2839 V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; SPTR: Q1Q3P2 Putative uncharacterized protein; TIGRFAM: V-type ATPase, D subunit; PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D.


ensembl_gene_id: Deba_1449
symbol: Deba_1449
gene_biotype: protein_coding
description:
  V-type ATPase 116 kDa subunit; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: bvu:BVU_3562 putative V-type ATP synthase subunit I; PFAM: V-type ATPase 116 kDa subunit; SPTR: A0P1I3 V-type ATP synthase subunit I; PFAM: V-type ATPase 116kDa subunit family.


ensembl_gene_id: Deba_1450
symbol: Deba_1450
gene_biotype: protein_coding
description:
  H+transporting two-sector ATPase C subunit; InterPro IPR002379; KEGG: pcu:pc1676 V-type ATP synthase subunit K; PFAM: H+transporting two-sector ATPase C subunit; SPTR: Q6MAJ9 Putative V-type sodium ATP synthase subunit K (NtpK); PFAM: ATP synthase subunit C.


ensembl_gene_id: Deba_1452
symbol: Deba_1452
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sgr:SGR_3956 putative two-component system sensor kinase; SPTR: B5H5J4 Sensor protein.


ensembl_gene_id: Deba_1453
symbol: Deba_1453
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nph:NP2724A isochorismate synthase; SPTR: C8TJH7 Putative side tail fiber protein.


ensembl_gene_id: Deba_1454
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: Deba_1455
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Deba_1456
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Deba_1459
symbol: Deba_1459
gene_biotype: protein_coding
description:
  InterPro IPR003660; KEGG: gem:GM21_0283 putative sensor with HAMP domain; PFAM: histidine kinase HAMP region domain protein; SPTR: C6DY92 Putative sensor with HAMP domain; PFAM: HAMP domain; Protein of unknown function (DUF3365).


ensembl_gene_id: Deba_1460
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: Deba_1461
symbol: Deba_1461
gene_biotype: protein_coding
description:
  PEGA domain protein; InterPro IPR013229:IPR011990; KEGG: dol:Dole_1853 TPR repeat-containing protein; PFAM: PEGA domain protein; SPTR: A8ZSC0 Tetratricopeptide TPR_2 repeat protein; PFAM: PEGA domain.


ensembl_gene_id: Deba_1462
symbol: Deba_1462
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR004827; KEGG: fal:FRAAL5152 dihydrolipoamide succinyltransferase, component of 2-oxoglutarate dehydrogenase complex (E2); SPTR: C0GSJ8 Ankyrin.


ensembl_gene_id: Deba_1464
symbol: Deba_1464
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase PpkA; InterPro IPR002035; KEGG: dat:HRM2_08320 predicted serine/threonine protein kinase PpkA; SPTR: C0QJU2 Predicted serine/threonine protein kinase PpkA.


ensembl_gene_id: Deba_1465
symbol: Deba_1465
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: dat:HRM2_08310 ABC-type transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0QJU1 ABC-type transporter, ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_1466
symbol: Deba_1466
gene_biotype: protein_coding
description:
  KEGG: dat:HRM2_08300 ABC-type transporter, permease protein; SPTR: C0QJU0 ABC-type transporter, permease protein.


ensembl_gene_id: Deba_1467
symbol: Deba_1467
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dat:HRM2_08300 ABC-type transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: C0QJU0 ABC-type transporter, permease protein; PFAM: Predicted permease.


ensembl_gene_id: Deba_1468
symbol: Deba_1468
gene_biotype: protein_coding
description:
  Protein of unknown function DUF323; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: dat:HRM2_08290 hypothetical protein; PFAM: protein of unknown function DUF323; SPTR: C0QJT9 Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme.


ensembl_gene_id: Deba_1469
symbol: Deba_1469
gene_biotype: protein_coding
description:
  17 kDa surface antigen; InterPro IPR008816; KEGG: dat:HRM2_08270 hypothetical protein; PFAM: 17 kDa surface antigen; SPTR: C0QJT7 Putative uncharacterized protein.


ensembl_gene_id: Deba_1470
symbol: Deba_1470
gene_biotype: protein_coding
description:
  KEGG: dat:HRM2_08260 serine/threonine-protein kinase MRCK alpha (CDC42-binding protein kinase alpha); SPTR: C0QJT6 Serine/threonine-protein kinase MRCK alpha (CDC42-binding protein kinase alpha).


ensembl_gene_id: Deba_1471
symbol: Deba_1471
gene_biotype: protein_coding
description:
  Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151; KEGG: dat:HRM2_08250 CtpA1; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: C0QJT5 CtpA1; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc).


ensembl_gene_id: Deba_1472
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Deba_1473
symbol: Deba_1473
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023; KEGG: gur:Gura_2976 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: A5G5T0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA.


ensembl_gene_id: Deba_1474
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218:IPR013785:IPR006269; KEGG: dsa:Desal_2260 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-8-phosphooctulonate synthase; SPTR: C6BWN6 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase.


ensembl_gene_id: Deba_1475
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Deba_1476
symbol: Deba_1476
gene_biotype: protein_coding
description:
  COGs: COG0517 FOG: CBS domain; InterPro IPR000644:IPR013785; KEGG: sfu:Sfum_2076 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: C8QYZ4 Putative signal transduction protein with CBS domains; PFAM: CBS domain.


ensembl_gene_id: Deba_1477
symbol: Deba_1477
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; InterPro IPR005232:IPR014729; KEGG: pca:Pcar_2431 hypothetical protein; SPTR: Q3A1T7 Putative uncharacterized protein; PFAM: Asparagine synthase; TIGRFAM: conserved hypothetical protein TIGR00268.


ensembl_gene_id: Deba_1478
symbol: Deba_1478
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: IL16; interleukin 16 (lymphocyte chemoattractant factor); SPTR: A1ZZJ3 Lipoprotein, putative.


ensembl_gene_id: Deba_1481
symbol: Deba_1481
gene_biotype: protein_coding
description:
  COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: hbu:Hbut_0038 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: C8QWH8 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: Deba_1482
symbol: Deba_1482
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR008985; KEGG: ami:Amir_4870 LamG domain protein jellyroll fold domain protein; SPTR: C6WQK6 LamG domain protein jellyroll fold domain protein.


ensembl_gene_id: Deba_1484
symbol: Deba_1484
gene_biotype: protein_coding
description:
  Regulatory protein, FmdB family; COGs: COG2331 conserved hypothetical protein; InterPro IPR013429; KEGG: dal:Dalk_4244 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; SPTR: B8FM88 Regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.


ensembl_gene_id: Deba_1486
symbol: cobB
gene_biotype: protein_coding
description:
  Silent information regulator protein Sir2; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: sfu:Sfum_3557 silent information regulator protein Sir2; PFAM: Silent information regulator protein Sir2; SPTR: A0LP75 Silent information regulator protein Sir2; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: Deba_1487
symbol: Deba_1487
gene_biotype: protein_coding
description:
  Protein of unknown function DUF62; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: rmr:Rmar_1448 protein of unknown function DUF62; PFAM: protein of unknown function DUF62; SPTR: Q02BF9 Putative uncharacterized protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase.


ensembl_gene_id: Deba_1489
symbol: Deba_1489
gene_biotype: protein_coding
description:
  KEGG: sml:Smlt3164 hypothetical protein; SPTR: B8L4U1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2939).


ensembl_gene_id: Deba_1490
symbol: Deba_1490
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR013656:IPR003661:IPR003594:IPR005467:IPR 000014:IPR000700:IPR004358:IPR001610:IPR009082; KEGG: dma:DMR_41550 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: C4XPU6 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phos [...]


ensembl_gene_id: Deba_1491
symbol: Deba_1491
gene_biotype: protein_coding
description:
  COGs: COG0372 Citrate synthase; InterProIPR002020:IPR019810:IPR016142:IPR010953:IPR 016141; KEGG: dal:Dalk_4974 citrate synthase I; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: B8FDL5 Citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); Belongs to the citrate synthase family.


ensembl_gene_id: Deba_1492
symbol: Deba_1492
gene_biotype: protein_coding
description:
  COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR013785; KEGG: dal:Dalk_0105 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: B8FKK0 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane dioxygenase.


ensembl_gene_id: Deba_1493
symbol: Deba_1493
gene_biotype: protein_coding
description:
  COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022:IPR011762:IPR011763; KEGG: dal:Dalk_2022 carboxyl transferase; PFAM: carboxyl transferase; SPTR: B8FG38 Carboxyl transferase; PFAM: Carboxyl transferase domain.


ensembl_gene_id: Deba_1494
symbol: Deba_1494
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: xau:Xaut_0582 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A7ICU5 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_1495
symbol: Deba_1495
gene_biotype: protein_coding
description:
  InterPro IPR002145; KEGG: sus:Acid_5575 hypothetical protein; PFAM: CopG domain protein DNA-binding domain protein; SPTR: C0E1A0 Putative uncharacterized protein; PFAM: Ribbon-helix-helix protein, copG family.


ensembl_gene_id: Deba_1496
symbol: Deba_1496
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase GroES domain protein; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR011032:IPR016040; KEGG: dma:DMR_23620 dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; SPTR: C4XSN1 Dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain.


ensembl_gene_id: Deba_1497
symbol: Deba_1497
gene_biotype: protein_coding
description:
  Kynurenine formamidase; COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: gme:Gmet_0042 putative cyclase; PFAM: cyclase family protein; PRIAM: Arylformamidase; SPTR: Q39ZN2 Putative cyclase; PFAM: Putative cyclase.


ensembl_gene_id: Deba_1499
symbol: Deba_1499
gene_biotype: protein_coding
description:
  COGs: COG3065 Starvation-inducible outer membrane lipoprotein; InterPro IPR004658; KEGG: sat:SYN_00736 outer membrane protein Slp precursor; PFAM: outer membrane lipoprotein Slp; SPTR: Q2LVC8 Outer membrane protein slp; PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family.


ensembl_gene_id: Deba_1500
symbol: Deba_1500
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR001484:IPR016196; KEGG: dol:Dole_2623 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ZWU5 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Deba_1502
symbol: Deba_1502
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006090:IPR013764:IPR009075:IPR009100; KEGG: sse:Ssed_3347 acyl-CoA dehydrogenase-like protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C0GJ79 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.


ensembl_gene_id: Deba_1503
symbol: Deba_1503
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: sfu:Sfum_0224 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: A0LES3 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1504
symbol: Deba_1504
gene_biotype: protein_coding
description:
  Regulatory protein GntR HTH; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR008920:IPR011711:IPR011991; KEGG: bbe:BBR47_15820 probable transcriptional regulator; PFAM: regulatory protein GntR HTH; fatty acid responsive transcription factor FadR domain protein; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: C0Z989 Probable transcriptional regulator; PFAM: FadR C-terminal domain; Bacterial regulatory proteins, gntR family; TIGRFAM: fatty acid metabolism transcriptional regulator FadR.


ensembl_gene_id: Deba_1505
symbol: Deba_1505
gene_biotype: protein_coding
description:
  FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR006094:IPR004113:IPR016166:IPR016167:IPR 016164; KEGG: pfl:PFL_2767 alkyl-dihydroxyacetonephosphate synthase, putative; PFAM: FAD linked oxidase domain protein; SPTR: Q4KD10 Alkyl-dihydroxyacetonephosphate synthase, putative; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain.


ensembl_gene_id: Deba_1506
symbol: Deba_1506
gene_biotype: protein_coding
description:
  COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076:IPR000447; KEGG: dal:Dalk_3177 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: Q08UG6 Glycerol-3-phosphate dehydrogenase 2; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: Deba_1507
symbol: Deba_1507
gene_biotype: protein_coding
description:
  Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: hch:HCH_04623 sugar (pentulose and hexulose) kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Q2SDF1 Sugar (Pentulose and hexulose) kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.


ensembl_gene_id: Deba_1508
symbol: Deba_1508
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR011990; KEGG: sfu:Sfum_2878 hypothetical protein; SPTR: A0LMA3 Putative uncharacterized protein.


ensembl_gene_id: Deba_1509
symbol: Deba_1509
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: ade:Adeh_2536 single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Q2IKX4 Single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ.


ensembl_gene_id: Deba_1510
symbol: Deba_1510
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afw:Anae109_3917 TPR repeat-containing protein; SPTR: A7HHA0 Tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Deba_1511
symbol: Deba_1511
gene_biotype: protein_coding
description:
  COGs: COG1832 CoA-binding protein; InterPro IPR003781:IPR016040; KEGG: tmz:Tmz1t_3640 CoA-binding domain protein; PFAM: CoA-binding domain protein; SPTR: C4KBQ8 CoA-binding domain protein.


ensembl_gene_id: Deba_1514
symbol: Deba_1514
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: Deba_1516
symbol: Deba_1516
gene_biotype: protein_coding
description:
  Peptidase S24/S26A/S26B, conserved region; Represses a number of genes involved in the response to DNA damage (SOS response).


ensembl_gene_id: Deba_1517
symbol: Deba_1517
gene_biotype: protein_coding
description:
  COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: dal:Dalk_3654 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: B8FGW2 Amidohydrolase 2; PFAM: Amidohydrolase.


ensembl_gene_id: Deba_1518
symbol: Deba_1518
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: sat:SYN_00971 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: Q2LSK6 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_1519
symbol: Deba_1519
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR012336:IPR011538:IPR019554:IPR019575:IPR 001450:IPR012335:IPR017896:IPR017900:IPR001949; KEGG: dat:HRM2_16600 NuoF; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: C0QAI3 NuoF; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain [...]


ensembl_gene_id: Deba_1520
symbol: Deba_1520
gene_biotype: protein_coding
description:
  NAD(P)-dependent iron-only hydrogenase iron-sulfur protein; InterPro IPR012336:IPR012335; KEGG: dat:HRM2_16520 NADP-reducing hydrogenase, subunit B; SPTR: C0QAH5 NADP-reducing hydrogenase, subunit B.


ensembl_gene_id: Deba_1521
symbol: Deba_1521
gene_biotype: protein_coding
description:
  Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR004358:IPR005467; KEGG: dat:HRM2_16530 sensory signal transduction histidine kinase (ATPase domain protein); PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B0PGV2 Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Deba_1522
symbol: Deba_1522
gene_biotype: protein_coding
description:
  PHP domain protein; COGs: COG1379 conserved hypothetical protein; InterPro IPR003141:IPR016195:IPR004013; KEGG: dth:DICTH_0765 PHP domain, putative; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: A1HP42 PHP C-terminal domain protein; PFAM: PHP domain.


ensembl_gene_id: Deba_1523
symbol: Deba_1523
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR009016:IPR001450:IPR007202:IPR010766:IPR 017896:IPR017900; KEGG: dat:HRM2_16550 iron-sulfur binding hydrogenase; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; DRTGG domain protein; SPTR: C0QAH8 Iron-sulfur binding hydrogenase; PFAM: Iron only hydrogenase large subunit, C-terminal domain; DRTGG domain; Putative Fe-S cluster; 4Fe-4S binding domain.


ensembl_gene_id: Deba_1524
symbol: Deba_1524
gene_biotype: protein_coding
description:
  COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: dth:DICTH_0761 anti-sigma regulatory factor; PFAM: ATP-binding region ATPase domain protein; SPTR: C1TN97 Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Deba_1525
symbol: Deba_1525
gene_biotype: protein_coding
description:
  KEGG: tai:Taci_0690 hypothetical protein; SPTR: D1B9H3 Putative uncharacterized protein; manually curated; PFAM: DRTGG domain.


ensembl_gene_id: Deba_1526
symbol: Deba_1526
gene_biotype: protein_coding
description:
  COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR012336:IPR002023:IPR012335; KEGG: dat:HRM2_16590 NuoE; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: C0QAI2 NuoE; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.


ensembl_gene_id: Deba_1527
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: Deba_1528
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: Deba_1529
symbol: Deba_1529
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphateguanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: Deba_1531
symbol: Deba_1531
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; InterPro IPR001173; KEGG: chl:Chy400_1885 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: C1ZM99 Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1532
symbol: Deba_1532
gene_biotype: protein_coding
description:
  Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: gur:Gura_3701 peptidase U62, modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: A5G7T6 Peptidase U62, modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase.


ensembl_gene_id: Deba_1533
symbol: Deba_1533
gene_biotype: protein_coding
description:
  Rhodanese domain protein; InterPro IPR001763; KEGG: dma:DMR_29550 rhodanese-like domain protein; SMART: Rhodanese domain protein; SPTR: C4XHS2 Rhodanese-like domain protein; PFAM: Rhodanese-like domain.


ensembl_gene_id: Deba_1534
symbol: Deba_1534
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR016038; KEGG: tac:Ta0351 acetyl-CoA acetyltransferase; SPTR: Q9HL79 Sterol carrier protein x/sterol carrier protein 2 related protein.


ensembl_gene_id: Deba_1535
symbol: Deba_1535
gene_biotype: protein_coding
description:
  Protein of unknown function DUF35; COGs: COG1545 nucleic-acid-binding protein containing a Zn-ribbon; InterPro IPR002878; KEGG: tvo:TVN1259 nucleic-acid-binding protein; PFAM: protein of unknown function DUF35; SPTR: Q978Y2 Putative uncharacterized protein TVG1322512.


ensembl_gene_id: Deba_1536
symbol: Deba_1536
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR006094:IPR004113:IPR 016167:IPR016168:IPR000542; KEGG: dat:HRM2_18570 GlcD2; PFAM: FAD linked oxidase domain protein; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: C0QBU7 GlcD2; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.


ensembl_gene_id: Deba_1537
symbol: Deba_1537
gene_biotype: protein_coding
description:
  Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR009051:IPR004017:IPR012285:IPR017896:IPR 017900; KEGG: gem:GM21_0576 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: C6DZR8 Putative uncharacterized protein; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_1538
symbol: Deba_1538
gene_biotype: protein_coding
description:
  InterPro IPR020365; KEGG: dma:DMR_37280 putative zinc resistance-associated protein precursor; SPTR: C4XM91 Putative zinc resistance-associated protein.


ensembl_gene_id: Deba_1539
symbol: Deba_1539
gene_biotype: protein_coding
description:
  COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterProIPR003661:IPR003594:IPR009082:IPR004358:IPR 005467; KEGG: dba:Dbac_1016 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C4T0M4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_1540
symbol: Deba_1540
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003593:IPR011006:IPR009057:IPR 002078:IPR002197:IPR020441; KEGG: dol:Dole_2807 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: A8ZXY3 Two component, sigma54 specific, transcriptional regulator, Fis fam [...]


ensembl_gene_id: Deba_1541
symbol: Deba_1541
gene_biotype: protein_coding
description:
  COGs: COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; InterPro IPR006315:IPR005546; KEGG: dol:Dole_2458 outer membrane autotransporter; PFAM: Autotransporter beta- domain protein; SPTR: Q0YV05 Outer membrane autotransporter barrel; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain.


ensembl_gene_id: Deba_1542
symbol: glgC
gene_biotype: protein_coding
description:
  Nucleotidyl transferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: Deba_1543
symbol: Deba_1543
gene_biotype: protein_coding
description:
  COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dac:Daci_3112 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A9BU35 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.


ensembl_gene_id: Deba_1544
symbol: Deba_1544
gene_biotype: protein_coding
description:
  Nickel transport complex, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: ppd:Ppro_1246 ABC-type Co2+ transport system periplasmic component-like protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: C8NCY5 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region.


ensembl_gene_id: Deba_1546
symbol: Deba_1546
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549; KEGG: dol:Dole_1102 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: A8ZX53 Putative uncharacterized protein; PFAM: Domain of unknown function DUF20.


ensembl_gene_id: Deba_1547
symbol: Deba_1547
gene_biotype: protein_coding
description:
  Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; COGs: COG0388 amidohydrolase; InterPro IPR003010:IPR001110; KEGG: ade:Adeh_3575 nitrilase/cyanide hydratase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Q2IFI3 Nitrilase/cyanide hydratase; PFAM: Carbon-nitrogen hydrolase.


ensembl_gene_id: Deba_1548
symbol: Deba_1548
gene_biotype: protein_coding
description:
  Putative phytochrome sensor protein; InterPro IPR003018; KEGG: dol:Dole_1615 response regulator receiver protein; PFAM: GAF domain protein; SPTR: A9A019 Response regulator receiver protein; PFAM: Protein of unknown function, DUF484.


ensembl_gene_id: Deba_1549
symbol: Deba_1549
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR011146:IPR001310:IPR011151; KEGG: ctt:CtCNB1_3676 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: D0J4Y9 Histidine triad (HIT) protein; PFAM: HIT domain.


ensembl_gene_id: Deba_1550
symbol: Deba_1550
gene_biotype: protein_coding
description:
  COGs: COG3264 Small-conductance mechanosensitive channel; InterProIPR000595:IPR018490:IPR011066:IPR010920:IPR 006685:IPR014710; KEGG: mxa:MXAN_2799 mechanosensitive ion channel/cyclic nucleotide-binding domain-containing protein; PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: B5II47 Mechanosensitive ion channel/cyclic nucleotide-binding domain protein; PFAM: Mechanosensitive ion channel; Cyclic nucleotide-binding domain.


ensembl_gene_id: Deba_1551
symbol: Deba_1551
gene_biotype: protein_coding
description:
  Channel protein, hemolysin III family; COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR005744:IPR004254; KEGG: dat:HRM2_17730 channel protein (hemolysin III family protein); PFAM: Hly-III family protein; SPTR: C1SGF8 Channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family.


ensembl_gene_id: Deba_1552
symbol: Deba_1552
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006092:IPR006091:IPR 006090:IPR013786:IPR013764; KEGG: dsy:DSY4721 hypothetical protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q24N82 Putative uncharacterized protein; PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_1553
symbol: Deba_1553
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003593:IPR011006:IPR009057:IPR 002078:IPR002197; KEGG: dba:Dbac_0335 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: C7LVC0 Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM [...]


ensembl_gene_id: Deba_1554
symbol: Deba_1554
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterProIPR000014:IPR003660:IPR003661:IPR003594:IPR 009082:IPR013656:IPR004358:IPR005467; KEGG: dba:Dbac_0336 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C7LVC1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase [...]


ensembl_gene_id: Deba_1555
symbol: Deba_1555
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR011006:IPR013105:IPR011990:IPR 019734:IPR013026; KEGG: nth:Nther_0252 response regulator receiver protein; PFAM: response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: response regulator receiver; SPTR: B2A4S9 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_1556
symbol: Deba_1556
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006036; KEGG: kol:Kole_0373 TrkA-N domain protein; PFAM: TrkA-N domain protein; SPTR: B4WH72 TrkA-N domain superfamily; PFAM: TrkA-N domain.


ensembl_gene_id: Deba_1557
symbol: Deba_1557
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037:IPR006036; KEGG: nth:Nther_0254 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: B4WH73 TrkA-N domain family; PFAM: TrkA-N domain; TrkA-C domain.


ensembl_gene_id: Deba_1558
symbol: Deba_1558
gene_biotype: protein_coding
description:
  Cation transporter; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: kol:Kole_0375 cation transporter; PFAM: cation transporter; SPTR: B4WH74 Cation transport protein; PFAM: Cation transport protein.


ensembl_gene_id: Deba_1559
symbol: Deba_1559
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155; KEGG: dal:Dalk_4240 hypothetical protein; SPTR: B8FM84 Putative uncharacterized protein.


ensembl_gene_id: Deba_1560
symbol: Deba_1560
gene_biotype: protein_coding
description:
  Protein of unknown function DUF35; COGs: COG1545 nucleic-acid-binding protein containing a Zn-ribbon; InterPro IPR002878; KEGG: dal:Dalk_4239 protein of unknown function DUF35; PFAM: protein of unknown function DUF35; SPTR: B8FM83 Putative uncharacterized protein; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain.


ensembl_gene_id: Deba_1561
symbol: Deba_1561
gene_biotype: protein_coding
description:
  Protein of unknown function DUF188; COGs: COG1671 conserved hypothetical protein; InterPro IPR003791; KEGG: azo:azo2224 YaiI/YqxD family protein; PFAM: protein of unknown function DUF188; SPTR: Q2BPA3 Putative uncharacterized protein; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; Belongs to the UPF0178 family.


ensembl_gene_id: Deba_1562
symbol: Deba_1562
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076:IPR000447; KEGG: amr:AM1_2702 glycerol-3-phosphate dehydrogenase domain-containing protein; PFAM: FAD dependent oxidoreductase; SPTR: A0YYL2 Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: Deba_1563
symbol: Deba_1563
gene_biotype: protein_coding
description:
  Drug resistance transporter, Bcr/CflA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR004812:IPR016196:IPR011701; KEGG: mac:MA1858 membrane transport protein; PFAM: major facilitator superfamily MFS_1; SPTR: Q8TPP8 Membrane transport protein; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily.


ensembl_gene_id: Deba_1564
symbol: Deba_1564
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bte:BTH_I3269 phage-related secreted protein; SPTR: C9LRF1 Putative MoaD.


ensembl_gene_id: Deba_1567
symbol: Deba_1567
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ecw:EcE24377A_C0002 TraT complement resistance protein; SPTR: A7ZGS1 TraT complement resistance protein.


ensembl_gene_id: Deba_1572
symbol: Deba_1572
gene_biotype: protein_coding
description:
  InterPro IPR018087; KEGG: mca:MCA2904 hypothetical protein; SPTR: Q603A3 Putative uncharacterized protein.


ensembl_gene_id: Deba_1573
symbol: Deba_1573
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mca:MCA2905 prophage MuMc02 tail fiber domain-containing protein; SPTR: Q603A2 Prophage MuMc02, tail fiber domain protein; PFAM: Phage tail protein (Tail_P2_I).


ensembl_gene_id: Deba_1574
symbol: Deba_1574
gene_biotype: protein_coding
description:
  Baseplate J family protein; COGs: COG3948 Phage-related baseplate assembly protein; InterPro IPR006949:IPR014507; KEGG: drm:Dred_1220 baseplate J family protein; PFAM: Baseplate J family protein; SPTR: B6WRR4 Putative uncharacterized protein; PFAM: Baseplate J-like protein.


ensembl_gene_id: Deba_1575
symbol: Deba_1575
gene_biotype: protein_coding
description:
  GPW/gp25 family protein; InterPro IPR007048; KEGG: drm:Dred_1219 gpW/GP25 family protein; PFAM: GPW/gp25 family protein; SPTR: C2BG15 GPW/gp25 family protein; PFAM: Gene 25-like lysozyme.


ensembl_gene_id: Deba_1576
symbol: Deba_1576
gene_biotype: protein_coding
description:
  KEGG: cvi:CV_0414 hypothetical protein; SPTR: Q7P101 Putative uncharacterized protein; PFAM: Phage P2 GpU.


ensembl_gene_id: Deba_1577
symbol: Deba_1577
gene_biotype: protein_coding
description:
  COGs: COG4540 Phage P2 baseplate assembly protein gpV; InterPro IPR013046:IPR006531; KEGG: drm:Dred_1217 phage baseplate assembly protein V; PFAM: baseplate assembly protein V; SPTR: B6WRR1 Putative uncharacterized protein; TIGRFAM: phage baseplate assembly protein V; PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V.


ensembl_gene_id: Deba_1578
symbol: Deba_1578
gene_biotype: protein_coding
description:
  Late control D family protein; COGs: COG3500 Phage protein D; InterPro IPR010277; KEGG: drm:Dred_1216 phage late control D family protein; PFAM: late control D family protein; SPTR: B6WRQ9 Putative uncharacterized protein; PFAM: Phage late control gene D protein (GPD).


ensembl_gene_id: Deba_1579
symbol: Deba_1579
gene_biotype: protein_coding
description:
  KEGG: bcj:BCAS0511 putative phage tail protein gpX; SPTR: B4ENQ7 Putative phage tail protein gpX; PFAM: Phage Tail Protein X.


ensembl_gene_id: Deba_1580
symbol: Deba_1580
gene_biotype: protein_coding
description:
  Phage tail tape measure protein, TP901 family; COGs: COG5283 Phage-related tail protein; InterPro IPR010090; KEGG: rce:RC1_1127 phage tail tape measure protein, TP901 family, core region; PFAM: tail tape measure protein TP901 core region; SPTR: C6NTT0 Phage tail length tape-measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.


ensembl_gene_id: Deba_1583
symbol: Deba_1583
gene_biotype: protein_coding
description:
  COGs: COG3498 Phage tail tube protein FII; InterPro IPR006498; KEGG: spe:Spro_4913 major tail tube protein; PFAM: major tail tube protein; SPTR: A8GLL5 Major tail tube protein; PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family.


ensembl_gene_id: Deba_1584
symbol: Deba_1584
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG3497 Phage tail sheath protein FI; KEGG: drm:Dred_1212 hypothetical protein; SPTR: A4J3U3 Putative uncharacterized protein; PFAM: Phage tail sheath protein.


ensembl_gene_id: Deba_1586
symbol: Deba_1586
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rfr:Rfer_2949 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; SPTR: Q21U93 Imidazole glycerol phosphate synthase subunit hisH.


ensembl_gene_id: Deba_1587
symbol: Deba_1587
gene_biotype: protein_coding
description:
  COGs: COG5005 Mu-like prophage protein gpG; InterPro IPR006522; KEGG: dvu:DVU1114 virion morphogenesis protein; PFAM: virion morphogenesis (putative tail completion) protein; SPTR: Q72D17 Virion morphogenesis protein; TIGRFAM: phage virion morphogenesis protein; PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein.


ensembl_gene_id: Deba_1588
symbol: Deba_1588
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1320; COGs: COG4387 Mu-like prophage protein gp36; InterPro IPR009752; KEGG: sfu:Sfum_1884 hypothetical protein; PFAM: protein of unknown function DUF1320; SPTR: A0LJG7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1320).


ensembl_gene_id: Deba_1589
symbol: Deba_1589
gene_biotype: protein_coding
description:
  KEGG: dde:Dde_3377 hypothetical protein; SPTR: Q30VX5 Putative uncharacterized protein; PFAM: Phage major capsid protein E.


ensembl_gene_id: Deba_1594
symbol: Deba_1594
gene_biotype: protein_coding
description:
  KEGG: dde:Dde_3371 hypothetical protein; SPTR: Q30VY1 Putative uncharacterized protein; PFAM: Transposase.


ensembl_gene_id: Deba_1595
symbol: Deba_1595
gene_biotype: protein_coding
description:
  Protein of unknown function DUF264; COGs: COG4373 Mu-like prophage FluMu protein gp28; InterPro IPR004921; KEGG: dra:DR_A0094 hypothetical protein; PFAM: protein of unknown function DUF264; SPTR: Q9RZ60 Putative uncharacterized protein; PFAM: Terminase-like family.


ensembl_gene_id: Deba_1596
symbol: Deba_1596
gene_biotype: protein_coding
description:
  Protein of unknown function DUF935; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: dde:Dde_3373 hypothetical protein; PFAM: protein of unknown function DUF935; SPTR: Q30VX9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF935).


ensembl_gene_id: Deba_1597
symbol: Deba_1597
gene_biotype: protein_coding
description:
  Phage head morphogenesis protein, SPP1 gp7 family; COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30; InterPro IPR006528; KEGG: dde:Dde_3374 phage putative head morphogenesis protein, SPP1 gp7; PFAM: putative head morphogenesis protein SPP1 gp7; SPTR: Q30VX8 Phage putative head morphogenesis protein, SPP1 gp7; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.


ensembl_gene_id: Deba_1598
symbol: Deba_1598
gene_biotype: protein_coding
description:
  InterPro IPR006935:IPR018187; KEGG: dau:Daud_0199 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; SPTR: B1I0R5 Type III restriction enzyme, res subunit; manually curated; PFAM: Type III restriction enzyme, res subunit.


ensembl_gene_id: Deba_1599
symbol: Deba_1599
gene_biotype: protein_coding
description:
  DNA methylase N-4/N-6 domain protein; COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002941:IPR002295:IPR002052:IPR005829; KEGG: sfu:Sfum_2856 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: A0LM81 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase.


ensembl_gene_id: Deba_1600
symbol: Deba_1600
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR009057; KEGG: rce:RC1_1105 hypothetical protein; SPTR: C4WG48 Putative uncharacterized protein.


ensembl_gene_id: Deba_1602
symbol: Deba_1602
gene_biotype: protein_coding
description:
  KEGG: dde:Dde_3358 hypothetical protein; SPTR: Q30VZ4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1018).


ensembl_gene_id: Deba_1604
symbol: Deba_1604
gene_biotype: protein_coding
description:
  COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR010992; KEGG: saf:SULAZ_0074 DNA-binding protein HU 1 (DNA-binding protein II) (HB); PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: C1DXF9 DNA-binding protein HU 1 (DNA-binding protein II) (HB); PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Deba_1605
symbol: Deba_1605
gene_biotype: protein_coding
description:
  KEGG: dvu:DVU1136 host-nuclease inhibitor protein Gam, putative; SPTR: Q72CZ5 Host-nuclease inhibitor protein Gam, putative; PFAM: Bacteriophage Mu Gam like protein.


ensembl_gene_id: Deba_1608
symbol: Deba_1608
gene_biotype: protein_coding
description:
  COGs: COG2842 Uncharacterized ATPase putative transposase; KEGG: dvu:DVU1139 bacteriophage DNA transposition B protein, putative; SPTR: Q72CZ2 Bacteriophage DNA transposition B protein, putative.


ensembl_gene_id: Deba_1609
symbol: Deba_1609
gene_biotype: protein_coding
description:
  Integrase catalytic region; InterProIPR012337:IPR009061:IPR009057:IPR001584:IPR 012287; KEGG: dvu:DVU1140 bacteriophage transposase A protein, putative; PFAM: Integrase catalytic region; SPTR: Q72CZ1 Bacteriophage transposase A protein, putative; PFAM: Mu transposase, C-terminal; Mu DNA binding, I gamma subdomain; Integrase core domain.


ensembl_gene_id: Deba_1611
symbol: Deba_1611
gene_biotype: protein_coding
description:
  Putative phage repressor; InterProIPR001387:IPR015927:IPR010982:IPR019759:IPR 011056; KEGG: csa:Csal_1365 putative phage repressor; PFAM: helix-turn-helix domain protein; Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein; SPTR: Q1QXT8 Putative phage repressor; PFAM: Helix-turn-helix; Peptidase S24-like.


ensembl_gene_id: Deba_1612
symbol: Deba_1612
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR000014:IPR001932:IPR013656:IPR010822:IPR 000700; KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; SPTR: C8QVW1 Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Deba_1615
symbol: Deba_1615
gene_biotype: protein_coding
description:
  COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439:IPR017871; KEGG: sfu:Sfum_3314 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0LNI5 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Deba_1616
symbol: Deba_1616
gene_biotype: protein_coding
description:
  Na+ dependent nucleoside transporter domain protein; COGs: COG1972 Nucleoside permease; InterPro IPR002668:IPR011642:IPR011657; KEGG: dat:HRM2_11540 NupC; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; SPTR: C0QLW0 NupC; PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter.


ensembl_gene_id: Deba_1617
symbol: Deba_1617
gene_biotype: protein_coding
description:
  Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: dal:Dalk_4149 protein of unknown function DUF342; PFAM: protein of unknown function DUF342; SPTR: B8FMW3 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF342).


ensembl_gene_id: Deba_1618
symbol: Deba_1618
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sus:Acid_4073 alpha-2-macroglobulin domain-containing protein; SPTR: Q01Z77 Alpha-2-macroglobulin domain protein.


ensembl_gene_id: Deba_1619
symbol: Deba_1619
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898:IPR000540; KEGG: dvl:Dvul_2319 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q72ED8 Chemotaxis protein PomA; PFAM: MotA/TolQ/ExbB proton channel family.


ensembl_gene_id: Deba_1620
symbol: Deba_1620
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: dsa:Desal_3399 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: C6BSJ2 OmpA/MotB domain protein; PFAM: OmpA family.


ensembl_gene_id: Deba_1621
symbol: Deba_1621
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004090; KEGG: dat:HRM2_09140 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Q1K450 Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_1622
symbol: Deba_1622
gene_biotype: protein_coding
description:
  COGs: COG0430 RNA 3'-terminal phosphate cyclase; InterPro IPR013792:IPR000228:IPR013796; KEGG: pcl:Pcal_2009 RNA 3'-terminal-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; RNA 3'-terminal phosphate cyclase insert region; PRIAM: RNA-3'-phosphate cyclase; SPTR: A3MXQ7 Probable RNA 3'-terminal phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase (RTC), insert domain; RNA 3'-terminal phosphate cyclase; TIGRFAM: RNA 3'-phosphate cyclase.


ensembl_gene_id: Deba_1623
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Deba_1624
symbol: Deba_1624
gene_biotype: protein_coding
description:
  InterPro IPR005834; KEGG: ppr:PBPRA2135 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A6FCM0 Putative uncharacterized protein; PFAM: haloacid dehalogenase-like hydrolase.


ensembl_gene_id: Deba_1625
symbol: Deba_1625
gene_biotype: protein_coding
description:
  Fagellar hook-basal body protein; COGs: COG1749 Flagellar hook protein FlgE; InterProIPR020013:IPR001444:IPR011491:IPR010930:IPR 019776; KEGG: pau:PA14_50450 flagellar hook protein FlgE; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; SPTR: Q02IP7 Flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Deba_1626
symbol: Deba_1626
gene_biotype: protein_coding
description:
  COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR015391:IPR000297; KEGG: pca:Pcar_0090 parvulin-like peptidyl-prolyl isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; SPTR: Q3A8D9 Parvulin-like peptidyl-prolyl isomerase; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain.


ensembl_gene_id: Deba_1627
symbol: Deba_1627
gene_biotype: protein_coding
description:
  SurA domain protein; InterPro IPR015391:IPR000297; KEGG: sat:SYN_02487 peptidyl-prolyl cis-trans isomerase; PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Q2LRQ8 Peptidyl-prolyl cis-trans isomerase; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain.


ensembl_gene_id: Deba_1628
symbol: Deba_1628
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873:IPR020845; KEGG: dol:Dole_3006 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A8ZZ36 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_1629
symbol: Deba_1629
gene_biotype: protein_coding
description:
  NapC/NirT cytochrome c domain protein; COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR005126:IPR011031; KEGG: dal:Dalk_2564 NapC/NirT cytochrome c domain protein; PFAM: NapC/NirT cytochrome c domain protein; SPTR: B8FFJ7 NapC/NirT cytochrome c domain protein; PFAM: NapC/NirT cytochrome c family, N-terminal region.


ensembl_gene_id: Deba_1630
symbol: Deba_1630
gene_biotype: protein_coding
description:
  InterPro IPR011031; KEGG: dal:Dalk_2563 hypothetical protein; SPTR: B8FFJ6 Putative uncharacterized protein.


ensembl_gene_id: Deba_1632
symbol: Deba_1632
gene_biotype: protein_coding
description:
  KEGG: sat:SYN_00675 putative cytoplasmic protein; SPTR: Q2LV52 Hypothetical cytosolic protein; PFAM: DsrE/DsrF-like family.


ensembl_gene_id: Deba_1633
symbol: Deba_1633
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: dal:Dalk_3455 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: B8FLJ7 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Deba_1634
symbol: Deba_1634
gene_biotype: protein_coding
description:
  Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: dol:Dole_2648 flavodoxin/nitric oxide synthase; SPTR: A8ZX72 Flavodoxin/nitric oxide synthase; PFAM: Flavodoxin.


ensembl_gene_id: Deba_1635
symbol: Deba_1635
gene_biotype: protein_coding
description:
  COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: dat:HRM2_47540 outer membrane receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C0QHE4 Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain.


ensembl_gene_id: Deba_1636
symbol: Deba_1636
gene_biotype: protein_coding
description:
  COGs: COG2875 Precorrin-4 methylase; InterPro IPR000878:IPR014777:IPR014776; KEGG: ppd:Ppro_1250 uroporphyrin-III C/tetrapyrrole methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: A1ANF1 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases.


ensembl_gene_id: Deba_1637
symbol: Deba_1637
gene_biotype: protein_coding
description:
  Nickel transport complex, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: ppd:Ppro_1251 ABC-type Co2+ transport system periplasmic component-like protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Q1NY28 ABC-type Co2+ transport system periplasmic component-like; PFAM: Nickel uptake substrate-specific transmembrane region.


ensembl_gene_id: Deba_1638
symbol: Deba_1638
gene_biotype: protein_coding
description:
  COGs: COG0531 Amino acid transporter; InterPro IPR004841:IPR002293; KEGG: ote:Oter_3914 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: B1ZZB6 Amino acid permease-associated region; PFAM: Amino acid permease.


ensembl_gene_id: Deba_1641
symbol: Deba_1641
gene_biotype: protein_coding
description:
  Cobalamin (vitamin B12) biosynthesis CbiM protein; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: dvl:Dvul_1936 cobalt transport protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: A1VET6 Cobalamin (Vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.


ensembl_gene_id: Deba_1642
symbol: Deba_1642
gene_biotype: protein_coding
description:
  COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423:IPR020003; KEGG: sfu:Sfum_2809 RND efflux system outer membrane lipoprotein; PFAM: outer membrane efflux protein; SPTR: A0LM35 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.


ensembl_gene_id: Deba_1643
symbol: Deba_1643
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sfu:Sfum_2810 ABC transporter related; PFAM: protein of unknown function DUF214; SPTR: A0LM36 Macrolide export ATP-binding/permease protein macB; PFAM: Predicted permease.


ensembl_gene_id: Deba_1644
symbol: macB
gene_biotype: protein_coding
description:
  ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: Deba_1645
symbol: Deba_1645
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: sfu:Sfum_2811 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: A0LM37 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.


ensembl_gene_id: Deba_1646
symbol: Deba_1646
gene_biotype: protein_coding
description:
  COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759; KEGG: dal:Dalk_4912 cobalamin B12-binding domain protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; SPTR: B8FDF7 Cobalamin B12-binding domain protein; PFAM: B12 binding domain.


ensembl_gene_id: Deba_1647
symbol: Deba_1647
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: dal:Dalk_4913 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; SPTR: B8FDF8 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.


ensembl_gene_id: Deba_1648
symbol: Deba_1648
gene_biotype: protein_coding
description:
  InterPro IPR012437; KEGG: dal:Dalk_4914 protein of unknown function DUF1638; PFAM: Protein of unknown function DUF1638; SPTR: B8FDF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1638).


ensembl_gene_id: Deba_1649
symbol: Deba_1649
gene_biotype: protein_coding
description:
  Dihydropteroate synthase DHPS; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterPro IPR011005:IPR000489; KEGG: dal:Dalk_4910 methionine synthase; PFAM: dihydropteroate synthase DHPS; SPTR: B8FDF5 Methionine synthase; PFAM: Pterin binding enzyme.


ensembl_gene_id: Deba_1650
symbol: Deba_1650
gene_biotype: protein_coding
description:
  COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759; KEGG: dal:Dalk_4909 methionine synthase; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; SPTR: B8FDF4 Methionine synthase; PFAM: B12 binding domain.


ensembl_gene_id: Deba_1651
symbol: Deba_1651
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG0407 Uroporphyrinogen-III decarboxylase; KEGG: dal:Dalk_4908 hypothetical protein; SPTR: B8FDF3 Putative uncharacterized protein; PFAM: Uroporphyrinogen decarboxylase (URO-D).


ensembl_gene_id: Deba_1652
symbol: Deba_1652
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG4313 Protein involved in meta-pathway of phenol degradation; KEGG: sse:Ssed_1728 hypothetical protein; SPTR: A8FU16 Putative uncharacterized protein.


ensembl_gene_id: Deba_1653
symbol: Deba_1653
gene_biotype: protein_coding
description:
  Ferredoxin; COGs: COG3894 Uncharacterized metal-binding protein; InterPro IPR001041:IPR012675; KEGG: mta:Moth_2112 ferredoxin; PFAM: ferredoxin; SPTR: Q2RGN5 Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.


ensembl_gene_id: Deba_1654
symbol: Deba_1654
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR003593:IPR011006:IPR009057:IPR 002078:IPR002197:IPR020441; KEGG: dba:Dbac_0628 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: C7LX78 Two component, sigma54 specific, transcriptional regulator, Fis fa [...]


ensembl_gene_id: Deba_1655
symbol: Deba_1655
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR009082:IPR004358:IPR 005467:IPR000629; KEGG: dba:Dbac_0629 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C7LX79 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_1657
symbol: Deba_1657
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1203 helicase; InterProIPR006675:IPR006474:IPR014001:IPR006674:IPR 014021; KEGG: dvm:DvMF_1971 CRISPR-associated helicase Cas3; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: DEAD-like helicase; SPTR: B8DQ50 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; metal dependent phophohydrolase; PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; uncharacterized domain HDIG.


ensembl_gene_id: Deba_1658
symbol: Deba_1658
gene_biotype: protein_coding
description:
  InterPro IPR013422:IPR010155; KEGG: mfa:Mfla_0602 CRISPR-associated Cas5d family protein; PFAM: CRISPR-associated protein CT1134; SPTR: C0GMN3 CRISPR-associated protein Cas5 family; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, Dvulg subtype; CRISPR-associated protein Cas5, N-terminal domain.


ensembl_gene_id: Deba_1659
symbol: Deba_1659
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csd1 family; InterPro IPR010144; KEGG: dma:DMR_14370 hypothetical protein; PFAM: CRISPR-associated protein CT1133; SPTR: C4XNF3 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein, Csd1 family.


ensembl_gene_id: Deba_1660
symbol: Deba_1660
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csd2 family; COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR006482:IPR013418; KEGG: cvi:CV_1227 hypothetical protein; PFAM: CRISPR-associated protein TM1801; SPTR: C0GMN1 CRISPR-associated protein, Csd2 family; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family.


ensembl_gene_id: Deba_1661
symbol: Deba_1661
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: Deba_1662
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Deba_1663
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Deba_1664
symbol: Deba_1664
gene_biotype: protein_coding
description:
  Outer membrane autotransporter barrel domain protein; COGs: COG3240 Phospholipase/lecithinase/hemolysin; InterPro IPR006315:IPR005546:IPR017186; KEGG: dps:DP2994 lipase 1; PFAM: Autotransporter beta- domain protein; SPTR: Q6AIV7 Related to lipase 1; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain.


ensembl_gene_id: Deba_1665
symbol: Deba_1665
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439:IPR017871; KEGG: dma:DMR_44920 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C4XRR7 Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_1666
symbol: Deba_1666
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: gem:GM21_1778 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6E6J1 Oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter.


ensembl_gene_id: Deba_1667
symbol: Deba_1667
gene_biotype: protein_coding
description:
  COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dau:Daud_0387 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B1I1X8 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Deba_1668
symbol: Deba_1668
gene_biotype: protein_coding
description:
  COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dau:Daud_0386 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B1I1X7 Binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Deba_1669
symbol: Deba_1669
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: rci:RCIX1631 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Q0W426 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1670
symbol: Deba_1670
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR006311:IPR000914; KEGG: dae:Dtox_0360 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: C8W4W0 Extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.


ensembl_gene_id: Deba_1671
symbol: Deba_1671
gene_biotype: protein_coding
description:
  TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dal:Dalk_0867 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: B8FI05 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.


ensembl_gene_id: Deba_1674
symbol: Deba_1674
gene_biotype: protein_coding
description:
  CoA-binding domain protein; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR016102:IPR016040:IPR003781; KEGG: dal:Dalk_3032 CoA-binding domain protein; PFAM: CoA-binding domain protein; SPTR: B8FL87 CoA-binding domain protein; PFAM: CoA binding domain.


ensembl_gene_id: Deba_1676
symbol: Deba_1676
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: drt:Dret_0131 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C8WZF8 Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Deba_1677
symbol: Deba_1677
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterProIPR000595:IPR001808:IPR018490:IPR014710:IPR 011991:IPR012318; KEGG: dal:Dalk_0952 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: B8FI88 Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain.


ensembl_gene_id: Deba_1678
symbol: Deba_1678
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797:IPR002229; KEGG: gbm:Gbem_1791 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: B5EAA1 Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.


ensembl_gene_id: Deba_1679
symbol: Deba_1679
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nha:Nham_3101 GTP-dependent nucleic acid-binding protein EngD; SPTR: B5JD81 Inner membrane protein CreD.


ensembl_gene_id: Deba_1681
symbol: Deba_1681
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR009057:IPR000005:IPR020449:IPR 018062; KEGG: dsa:Desal_1879 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C6BUD1 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Deba_1682
symbol: Deba_1682
gene_biotype: protein_coding
description:
  COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531:IPR010917; KEGG: dds:Ddes_0429 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: B8J3V6 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.


ensembl_gene_id: Deba_1683
symbol: Deba_1683
gene_biotype: protein_coding
description:
  Methyltransferase type 12; InterPro IPR013217; KEGG: dsa:Desal_1877 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: C6BUC9 Methyltransferase type 12; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1684
symbol: Deba_1684
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: dds:Ddes_0427 hypothetical protein; SPTR: B8J3V4 Putative uncharacterized protein.


ensembl_gene_id: Deba_1685
symbol: Deba_1685
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593:IPR000515:IPR003439:IPR017871; KEGG: dsa:Desal_1875 binding-protein-dependent transport systems inner membrane component; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; SMART: AAA ATPase; SPTR: C6BUC7 Binding-protein-dependent transport systems inner membrane component; PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Deba_1686
symbol: Deba_1686
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR018524; KEGG: mvn:Mevan_0111 hypothetical protein; SPTR: A7BPX5 Membrane protein.


ensembl_gene_id: Deba_1687
symbol: Deba_1687
gene_biotype: protein_coding
description:
  KEGG: rru:Rru_A1148 hypothetical protein; SPTR: Q2RV96 Putative uncharacterized protein; PFAM: RAMP superfamily.


ensembl_gene_id: Deba_1688
symbol: Deba_1688
gene_biotype: protein_coding
description:
  Protein of unknown function DUF324; InterPro IPR005537; KEGG: rru:Rru_A1149 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: Q2RV95 Putative uncharacterized protein; PFAM: RAMP superfamily.


ensembl_gene_id: Deba_1689
symbol: Deba_1689
gene_biotype: protein_coding
description:
  KEGG: rru:Rru_A1150 hypothetical protein; SPTR: Q2RV94 Putative uncharacterized protein; PFAM: RAMP superfamily.


ensembl_gene_id: Deba_1693
symbol: Deba_1693
gene_biotype: protein_coding
description:
  KEGG: dau:Daud_1295 hypothetical protein; SPTR: A4BL60 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2276).


ensembl_gene_id: Deba_1694
symbol: Deba_1694
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR000157; KEGG: mag:amb3409 TPR repeat-containing protein; SPTR: Q2W1R2 FOG: TPR repeat.


ensembl_gene_id: Deba_1696
symbol: Deba_1696
gene_biotype: protein_coding
description:
  InterPro IPR009057:IPR001647:IPR012287; KEGG: sus:Acid_2363 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q025G7 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_1697
symbol: Deba_1697
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: afw:Anae109_4101 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A7HHT3 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1698
symbol: Deba_1698
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hoh:Hoch_4580 phosphate ABC transporter, inner membrane subunit PstA; SPTR: C1DMD3 D-galactonate transporter.


ensembl_gene_id: Deba_1700
symbol: Deba_1700
gene_biotype: protein_coding
description:
  COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731:IPR001308:IPR014729; KEGG: dal:Dalk_4506 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: B8FCM2 Electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: Deba_1701
symbol: Deba_1701
gene_biotype: protein_coding
description:
  COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730:IPR012255:IPR014729; KEGG: dal:Dalk_4507 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: B8FCM3 Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein domain.


ensembl_gene_id: Deba_1702
symbol: Deba_1702
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: dal:Dalk_0100 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: B8FKJ5 Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family.


ensembl_gene_id: Deba_1703
symbol: Deba_1703
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006092:IPR006091:IPR 006090:IPR013786:IPR013764; KEGG: dal:Dalk_2466 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B8FF99 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_1704
symbol: Deba_1704
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR009057:IPR011075:IPR001647:IPR012287; KEGG: dal:Dalk_2467 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B8FFA0 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_1705
symbol: Deba_1705
gene_biotype: protein_coding
description:
  COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575:IPR008271; KEGG: dol:Dole_1459 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: A8ZZB0 Aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.


ensembl_gene_id: Deba_1706
symbol: Deba_1706
gene_biotype: protein_coding
description:
  Protein of unknown function DUF362; COGs: COG2006 conserved hypothetical protein; InterPro IPR007160; KEGG: dol:Dole_0364 hypothetical protein; PFAM: protein of unknown function DUF362; SPTR: A8ZT10 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362).


ensembl_gene_id: Deba_1707
symbol: Deba_1707
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR006176:IPR006108:IPR 013328; KEGG: sth:STH2912 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: C1XLE8 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Deba_1708
symbol: Deba_1708
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: dol:Dole_3007 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ZZ37 ABC transporter-related protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_1709
symbol: Deba_1709
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: dol:Dole_3008 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ZZ38 ABC transporter-related protein; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.


ensembl_gene_id: Deba_1711
symbol: Deba_1711
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dol:Dole_3010 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: A8ZZ40 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_1712
symbol: Deba_1712
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dol:Dole_3011 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: A8ZZ41 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_1713
symbol: Deba_1713
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1555; InterPro IPR013424:IPR011449; KEGG: dba:Dbac_2542 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: C7LS72 Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain.


ensembl_gene_id: Deba_1715
symbol: Deba_1715
gene_biotype: protein_coding
description:
  Major capsid protein HK97; InterPro IPR006444; KEGG: pap:PSPA7_5150 putative phage-related protein; PFAM: major capsid protein HK97; SPTR: A6VBQ1 Putative phage-related protein; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.


ensembl_gene_id: Deba_1716
symbol: Deba_1716
gene_biotype: protein_coding
description:
  Phage prohead protease, HK97 family; COGs: COG3740 Phage head maturation protease; InterPro IPR006433; KEGG: pap:PSPA7_5151 HK97 family phage prohead protease; PFAM: peptidase U35 phage prohead HK97; SPTR: A9FSW2 Prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.


ensembl_gene_id: Deba_1718
symbol: Deba_1718
gene_biotype: protein_coding
description:
  DNA binding domain protein, excisionase family; InterPro IPR010093:IPR009061; KEGG: lrl:LC705_01062 predicted ORF; SPTR: C7TI67 Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Deba_1720
symbol: Deba_1720
gene_biotype: protein_coding
description:
  Bifunctional DNA primase/polymerase; InterPro IPR015330:IPR000276; KEGG: apt:APA01_26890 DNA recombinase RecA; PFAM: Bifunctional DNA primase/polymerase; SPTR: C6N3S3 Putative truncated Phage / plasmid primase P4; PFAM: Bifunctional DNA primase/polymerase, N-terminal.


ensembl_gene_id: Deba_1721
symbol: Deba_1721
gene_biotype: protein_coding
description:
  HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: dvu:DVU1505 holin, putative; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: Q72BX9 Holin, putative; manually curated; PFAM: HNH endonuclease.


ensembl_gene_id: Deba_1722
symbol: Deba_1722
gene_biotype: protein_coding
description:
  Terminase; COGs: COG4626 Phage terminase-like protein large subunit; InterPro IPR005021; KEGG: pap:PSPA7_5155 phage terminase, large subunit, putative; PFAM: Terminase; SPTR: A6VBQ6 Phage terminase, large subunit, putative; PFAM: Phage Terminase.


ensembl_gene_id: Deba_1723
symbol: Deba_1723
gene_biotype: protein_coding
description:
  Integrase catalytic region; InterPro IPR012337:IPR009057:IPR001584; KEGG: dvl:Dvul_0877 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: A1VBQ7 Integrase, catalytic region; PFAM: Integrase core domain.


ensembl_gene_id: Deba_1724
symbol: Deba_1724
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR010998:IPR002104:IPR013762; KEGG: rxy:Rxyl_1592 phage integrase; PFAM: integrase family protein; SPTR: Q1AVM4 Phage integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Deba_1725
symbol: Deba_1725
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterProIPR002606:IPR015865:IPR015864:IPR014729:IPR 001412; KEGG: dba:Dbac_2972 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; SPTR: C7LV43 Riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.


ensembl_gene_id: Deba_1726
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: Deba_1727
symbol: Deba_1727
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: Deba_1729
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Deba_1731
symbol: Deba_1731
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR015797:IPR000086; KEGG: mav:MAV_1301 hydrolase, NUDIX family protein; PFAM: NUDIX hydrolase; SPTR: A0QCA8 Hydrolase, NUDIX family protein; PFAM: NUDIX domain.


ensembl_gene_id: Deba_1732
symbol: Deba_1732
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; InterPro IPR019734:IPR001440:IPR011990:IPR013026; KEGG: sfu:Sfum_0684 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: A0LG31 Tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Deba_1733
symbol: Deba_1733
gene_biotype: protein_coding
description:
  RNA modification enzyme, MiaB family; COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR005839:IPR006638:IPR013848:IPR007197; KEGG: sfu:Sfum_0166 RNA modification protein; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; SPTR: A0LEL6 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: RNA modification enzyme, MiaB family.


ensembl_gene_id: Deba_1734
symbol: Deba_1734
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterProIPR015424:IPR004839:IPR015421:IPR015422:IPR 001176:IPR004838; KEGG: dal:Dalk_0567 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: B8FHI5 Aminotransferase class I and II; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Deba_1737
symbol: Deba_1737
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674; KEGG: amc:MADE_03089 metal-dependent phosphohydrolase domain; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: B4RVV1 Metal-dependent phosphohydrolase domain; PFAM: HD domain.


ensembl_gene_id: Deba_1739
symbol: Deba_1739
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0153; InterPro IPR005358:IPR002345; KEGG: dol:Dole_1894 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: A8ZSG1 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).


ensembl_gene_id: Deba_1740
symbol: Deba_1740
gene_biotype: protein_coding
description:
  COGs: COG3086 Positive regulator of sigma E activity; InterPro IPR007359; KEGG: dol:Dole_2512 positive regulator of sigma E, RseC/MucC; PFAM: Positive regulator of sigma(E) RseC/MucC; SPTR: A8ZW82 Positive regulator of sigma E, RseC/MucC; PFAM: Positive regulator of sigma(E), RseC/MucC.


ensembl_gene_id: Deba_1741
symbol: Deba_1741
gene_biotype: protein_coding
description:
  UspA domain protein; InterPro IPR006016:IPR014729; KEGG: dol:Dole_0159 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A8ZSQ6 UspA domain protein; PFAM: Universal stress protein family.


ensembl_gene_id: Deba_1742
symbol: Deba_1742
gene_biotype: protein_coding
description:
  ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: Deba_1743
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: Deba_1744
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: Deba_1745
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: Deba_1746
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: Deba_1747
symbol: Deba_1747
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: Deba_1748
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: Deba_1749
symbol: Deba_1749
gene_biotype: protein_coding
description:
  Response regulator receiver sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR001789:IPR003661:IPR003594:IPR011006:IPR 009082:IPR004358:IPR005467; KEGG: ote:Oter_3856 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: B1ZZ58 Sensor protein; PFAM: Response regulator receiver d [...]


ensembl_gene_id: Deba_1750
symbol: Deba_1750
gene_biotype: protein_coding
description:
  COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: mpd:MCP_2581 putative response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FJ25 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_1751
symbol: Deba_1751
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: bja:blr2886 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: A0Y7P0 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Deba_1752
symbol: Deba_1752
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: Deba_1753
symbol: Deba_1753
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR002869:IPR019752; KEGG: dal:Dalk_5038 indolepyruvate ferredoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: B8FDS8 Indolepyruvate ferredoxin oxidoreductase; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.


ensembl_gene_id: Deba_1754
symbol: Deba_1754
gene_biotype: protein_coding
description:
  Cytochrome b/b6 domain protein; COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR016174:IPR005797:IPR016175; KEGG: sth:STH3148 menaquinol-cytochrome c reductase; PFAM: Cytochrome b/b6 domain; SPTR: Q67JM0 Menaquinol-cytochrome C reductase; PFAM: Cytochrome b(N-terminal)/b6/petB.


ensembl_gene_id: Deba_1755
symbol: Deba_1755
gene_biotype: protein_coding
description:
  Rieske (2Fe-2S) iron-sulfur domain protein; COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941:IPR005805:IPR017909; KEGG: sth:STH3146 plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Q67JM2 Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain.


ensembl_gene_id: Deba_1756
symbol: Deba_1756
gene_biotype: protein_coding
description:
  InterPro IPR005798; KEGG: afw:Anae109_0242 cytochrome b/b6 domain-containing protein; SPTR: A7H6W4 Cytochrome b.


ensembl_gene_id: Deba_1757
symbol: Deba_1757
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR011031; KEGG: sse:Ssed_4024 hypothetical protein; SPTR: A8G0K5 Putative uncharacterized protein.


ensembl_gene_id: Deba_1758
symbol: Deba_1758
gene_biotype: protein_coding
description:
  InterPro IPR011031; KEGG: gme:Gmet_0536 cytochrome c family protein; SPTR: Q39Y95 Cytochrome c family protein.


ensembl_gene_id: Deba_1760
symbol: Deba_1760
gene_biotype: protein_coding
description:
  SirA family protein; InterPro IPR001455; KEGG: bay:RBAM_005450 YrkF; PFAM: SirA family protein; SPTR: C8R0L0 SirA family protein; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Deba_1761
symbol: Deba_1761
gene_biotype: protein_coding
description:
  InterPro IPR007272; KEGG: mgm:Mmc1_1601 protein of unknown function DUF395, YeeE/YedE; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: C0GRH3 Putative uncharacterized protein; PFAM: YeeE/YedE family (DUF395).


ensembl_gene_id: Deba_1762
symbol: Deba_1762
gene_biotype: protein_coding
description:
  PpiC-type peptidyl-prolyl cis-trans isomerase; InterProIPR019734:IPR000297:IPR011717:IPR001440:IPR 011990:IPR013026; KEGG: dal:Dalk_4303 TPR repeat-containing protein; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; Tetratricopeptide TPR_4; TPR repeat-containing protein; SPTR: B8FME5 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; PPIC-type PPIASE domain.


ensembl_gene_id: Deba_1765
symbol: Deba_1765
gene_biotype: protein_coding
description:
  OsmC family protein; InterPro IPR003718; KEGG: cli:Clim_1429 OsmC family protein; PFAM: OsmC family protein; SPTR: B3ED64 OsmC family protein; PFAM: OsmC-like protein.


ensembl_gene_id: Deba_1766
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: Deba_1767
symbol: Deba_1767
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: Deba_1768
symbol: Deba_1768
gene_biotype: protein_coding
description:
  Protein of unknown function DUF610 YibQ; COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: sfu:Sfum_3062 protein of unknown function DUF610, YibQ; PFAM: protein of unknown function DUF610 YibQ; SPTR: A0LMT4 Putative uncharacterized protein; PFAM: Divergent polysaccharide deacetylase.


ensembl_gene_id: Deba_1769
symbol: Deba_1769
gene_biotype: protein_coding
description:
  COGs: COG0793 Periplasmic protease; InterPro IPR004447:IPR001478:IPR005151; KEGG: gme:Gmet_1853 peptidase S41A, C-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Q39UJ2 Peptidase S41A, C-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.


ensembl_gene_id: Deba_1770
symbol: Deba_1770
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR011055:IPR016047; KEGG: aeh:Mlg_2569 peptidase M23B; PFAM: Peptidase M23; SPTR: Q0A5H8 Peptidase M23B; PFAM: Peptidase family M23.


ensembl_gene_id: Deba_1771
symbol: Deba_1771
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Deba_1772
symbol: Deba_1772
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; COGs: COG2884 ATPase involved in cell division; InterPro IPR005286:IPR003593:IPR003439:IPR017871; KEGG: sth:STH139 cell-division ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q67T69 Cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE.


ensembl_gene_id: Deba_1773
symbol: Deba_1773
gene_biotype: protein_coding
description:
  Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: Deba_1774
symbol: Deba_1774
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; InterPro IPR001173; KEGG: mex:Mext_0845 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A9W0Z4 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1775
symbol: Deba_1775
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR011990:IPR013026; KEGG: rca:Rcas_3987 TPR repeat-containing protein; SPTR: B6BDR6 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit, putative.


ensembl_gene_id: Deba_1776
symbol: Deba_1776
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tro:trd_1606 dolichyl-phosphate mannose synthase related protein; PFAM: glycosyl transferase family 2; SPTR: B9L0B3 Dolichyl-phosphate mannose synthase related protein; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_1777
symbol: Deba_1777
gene_biotype: protein_coding
description:
  InterPro IPR005242; KEGG: gme:Gmet_1389 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q39VV1 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.


ensembl_gene_id: Deba_1778
symbol: Deba_1778
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mch:Mchl_4214 sulfoacetaldehyde acetyltransferase; SPTR: B7L185 Sulfoacetaldehyde acetyltransferase.


ensembl_gene_id: Deba_1779
symbol: Deba_1779
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: dol:Dole_1483 hypothetical protein; SPTR: A8ZZD4 Putative uncharacterized protein; PFAM: Putative lysophospholipase.


ensembl_gene_id: Deba_1780
symbol: Deba_1780
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: ctt:CtCNB1_4404 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: D0IUZ3 Long-chain-fatty-acid--CoA ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_1782
symbol: Deba_1782
gene_biotype: protein_coding
description:
  InterPro IPR009057:IPR001647:IPR012287; KEGG: mpt:Mpe_A2962 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C5SCW5 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_1783
symbol: Deba_1783
gene_biotype: protein_coding
description:
  COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: gur:Gura_3497 RND efflux system outer membrane lipoprotein; PFAM: outer membrane efflux protein; SPTR: A5G784 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.


ensembl_gene_id: Deba_1784
symbol: Deba_1784
gene_biotype: protein_coding
description:
  Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: lhk:LHK_02130 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; SPTR: C1D9L2 Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.


ensembl_gene_id: Deba_1785
symbol: Deba_1785
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gme:Gmet_0809 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q39XH3 Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; manually curated; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Deba_1789
symbol: Deba_1789
gene_biotype: protein_coding
description:
  PaaR repeat-containing protein; InterPro IPR008727; KEGG: sfu:Sfum_3827 PaaR repeat-containing protein; SPTR: Q310H1 Putative uncharacterized protein; PFAM: PAAR motif.


ensembl_gene_id: Deba_1791
symbol: Deba_1791
gene_biotype: protein_coding
description:
  KEGG: sfu:Sfum_3825 hypothetical protein; SPTR: A0LPZ2 Putative uncharacterized protein; PFAM: Phage-related baseplate assembly protein.


ensembl_gene_id: Deba_1792
symbol: Deba_1792
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1353; InterPro IPR010767; KEGG: dde:Dde_0940 hypothetical protein; PFAM: protein of unknown function DUF1353; SPTR: C6MK65 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1353).


ensembl_gene_id: Deba_1793
symbol: Deba_1793
gene_biotype: protein_coding
description:
  Peptidase M15A; InterPro IPR009045:IPR013230; KEGG: dde:Dde_1882 hypothetical protein; PFAM: Peptidase M15A; SPTR: Q310G7 Putative uncharacterized protein; PFAM: Peptidase M15.


ensembl_gene_id: Deba_1794
symbol: Deba_1794
gene_biotype: protein_coding
description:
  COGs: COG3500 Phage protein D; KEGG: dde:Dde_0938 phage protein D-like; SPTR: Q314A7 Phage protein D-like; PFAM: Phage late control gene D protein (GPD).


ensembl_gene_id: Deba_1798
symbol: Deba_1798
gene_biotype: protein_coding
description:
  InterPro IPR010090; KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; PFAM: tail tape measure protein TP901 core region; SPTR: A0LPY5 Phage tail tape measure protein, TP901 family; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.


ensembl_gene_id: Deba_1800
symbol: Deba_1800
gene_biotype: protein_coding
description:
  InterPro IPR011747; KEGG: sfu:Sfum_3816 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C6MK57 Putative uncharacterized protein; PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.


ensembl_gene_id: Deba_1801
symbol: Deba_1801
gene_biotype: protein_coding
description:
  COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: sfu:Sfum_3815 phage tail sheath protein; PFAM: tail sheath protein; SPTR: C6MK56 Tail sheath protein; PFAM: Phage tail sheath protein.


ensembl_gene_id: Deba_1804
symbol: Deba_1804
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR011075:IPR009057:IPR001647:IPR015893; KEGG: dat:HRM2_00670 HTH-type transcriptional regulator (TetR-family protein); PFAM: regulatory protein TetR; SPTR: Q2N4Y3 Transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region.


ensembl_gene_id: Deba_1805
symbol: Deba_1805
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dat:HRM2_00680 HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q1JW26 Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Deba_1806
symbol: Deba_1806
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dat:HRM2_00690 ABC-type transporter, predicted premease protein; PFAM: protein of unknown function DUF214; SPTR: Q1JW27 Putative uncharacterized protein; manually curated; PFAM: Predicted permease.


ensembl_gene_id: Deba_1807
symbol: Deba_1807
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: dat:HRM2_00700 ABC-type transporter, predicted ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q1K3J3 ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Deba_1808
symbol: Deba_1808
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR010980:IPR002321; KEGG: tbd:Tbd_1357 hypothetical protein; SPTR: Q1K3J4 Putative uncharacterized protein; manually curated; PFAM: Cytochrome C'.


ensembl_gene_id: Deba_1809
symbol: Deba_1809
gene_biotype: protein_coding
description:
  RND efflux system, outer membrane lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: dat:HRM2_00710 proton-shuffling outer membrane efflux protein (OprM-like); PFAM: outer membrane efflux protein; SPTR: Q1JW30 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.


ensembl_gene_id: Deba_1810
symbol: Deba_1810
gene_biotype: protein_coding
description:
  KEGG: sfu:Sfum_3812 hypothetical protein; SPTR: A0LPX9 Putative uncharacterized protein; PFAM: Bacteriophage protein of unknown function (DUF646).


ensembl_gene_id: Deba_1816
symbol: Deba_1816
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); COGs: COG3392 Adenine-specific DNA methylase; InterPro IPR002052:IPR002294:IPR012327; KEGG: dde:Dde_0922 adenine-specific DNA methylase-like protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Q314C3 Adenine-specific DNA methylase-like; PFAM: D12 class N6 adenine-specific DNA methyltransferase.


ensembl_gene_id: Deba_1819
symbol: Deba_1819
gene_biotype: protein_coding
description:
  InterPro IPR006528; KEGG: dde:Dde_0919 phage putative head morphogenesis protein, SPP1 gp7; PFAM: putative head morphogenesis protein SPP1 gp7; SPTR: Q314C6 Phage putative head morphogenesis protein, SPP1 gp7; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.


ensembl_gene_id: Deba_1821
symbol: Deba_1821
gene_biotype: protein_coding
description:
  KEGG: dde:Dde_0917 hypothetical protein; SPTR: Q314C8 Putative uncharacterized protein; PFAM: Terminase-like family.


ensembl_gene_id: Deba_1825
symbol: Deba_1825
gene_biotype: protein_coding
description:
  KEGG: dde:Dde_1913 hypothetical protein; SPTR: Q310D6 Putative uncharacterized protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: Deba_1826
symbol: Deba_1826
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterProIPR004107:IPR002104:IPR011010:IPR010998:IPR 013762; KEGG: sfu:Sfum_3796 phage integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: A0LPW3 Phage integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Deba_1830
symbol: Deba_1830
gene_biotype: protein_coding
description:
  DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core.


ensembl_gene_id: Deba_1831
symbol: Deba_1831
gene_biotype: protein_coding
description:
  COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family.


ensembl_gene_id: Deba_1832
symbol: Deba_1832
gene_biotype: protein_coding
description:
  ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein.


ensembl_gene_id: Deba_1833
symbol: Deba_1833
gene_biotype: protein_coding
description:
  Protein of unknown function DUF669; InterPro IPR007731; KEGG: sfu:Sfum_3787 hypothetical protein; PFAM: protein of unknown function DUF669; SPTR: Q310C5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF669).


ensembl_gene_id: Deba_1837
symbol: Deba_1837
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; InterPro IPR018170:IPR014284; KEGG: dde:Dde_1928 sigma-24 (FecI-like); SPTR: C6MK24 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Deba_1841
symbol: Deba_1841
gene_biotype: protein_coding
description:
  Transcriptional repressor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response).


ensembl_gene_id: Deba_1843
symbol: Deba_1843
gene_biotype: protein_coding
description:
  KEGG: dde:Dde_1934 putative bacteriophage-related protein; SPTR: Q310B5 Putative bacteriophage-related protein; PFAM: Protein of unknown function (DUF2924).


ensembl_gene_id: Deba_1844
symbol: Deba_1844
gene_biotype: protein_coding
description:
  Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: dde:Dde_1935 site-specific recombinase; PFAM: Resolvase domain; Recombinase; SPTR: Q310B4 Site-specific recombinase; PFAM: Recombinase; Resolvase, N terminal domain.


ensembl_gene_id: Deba_1846
symbol: Deba_1846
gene_biotype: protein_coding
description:
  Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Deba_1847
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: Deba_1848
symbol: Deba_1848
gene_biotype: protein_coding
description:
  COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685:IPR010920:IPR011014:IPR011066; KEGG: hut:Huta_2837 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: C7NQI1 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel.


ensembl_gene_id: Deba_1850
symbol: Deba_1850
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dat:HRM2_35720 putative methyl-accepting chemotaxis protein; SPTR: Q1NWQ8 Putative uncharacterized protein.


ensembl_gene_id: Deba_1852
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Deba_1853
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: Deba_1854
symbol: Deba_1854
gene_biotype: protein_coding
description:
  UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212:IPR014016:IPR014017; KEGG: acp:A2cp1_1439 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: B8JH81 UvrD/REP helicase; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: Deba_1855
symbol: Deba_1855
gene_biotype: protein_coding
description:
  COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: ade:Adeh_2513 ATP-dependent nuclease subunit B-like; SPTR: Q2IKV6 ATP-dependent nuclease subunit B-like.


ensembl_gene_id: Deba_1857
symbol: Deba_1857
gene_biotype: protein_coding
description:
  Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680:IPR011059; KEGG: mta:Moth_0462 amidohydrolase; PFAM: amidohydrolase; SPTR: Q2RL96 Amidohydrolase; PFAM: Amidohydrolase family.


ensembl_gene_id: Deba_1858
symbol: Deba_1858
gene_biotype: protein_coding
description:
  Flavodoxin/nitric oxide synthase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR008254; KEGG: nth:Nther_0880 flavodoxin/nitric oxide synthase; PFAM: flavodoxin/nitric oxide synthase; SPTR: B2A899 Flavodoxin/nitric oxide synthase; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Deba_1859
symbol: Deba_1859
gene_biotype: protein_coding
description:
  Protein of unknown function DUF583; InterPro IPR007607; KEGG: tye:THEYE_A0051 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: B5YGX5 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583.


ensembl_gene_id: Deba_1862
symbol: Deba_1862
gene_biotype: protein_coding
description:
  ErfK/YbiS/YcfS/YnhG family protein; COGs: COG3034 conserved hypothetical protein; InterPro IPR005490; KEGG: sat:SYN_02167 TPR repeat-containing protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: Q2LTB1 Tetratricopeptide repeat family protein; PFAM: L,D-transpeptidase catalytic domain.


ensembl_gene_id: Deba_1863
symbol: Deba_1863
gene_biotype: protein_coding
description:
  COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR017441:IPR006176:IPR006108:IPR001753:IPR 016040:IPR008927:IPR013328; KEGG: chy:CHY_1609 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; Enoyl-CoA hydratase/isomerase; SPTR: Q3ABP7 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: Deba_1864
symbol: Deba_1864
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: drm:Dred_0348 acetyl-CoA acetyltransferase; SPTR: A4J1E3 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Deba_1866
symbol: Deba_1866
gene_biotype: protein_coding
description:
  COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444:IPR010930:IPR020013; KEGG: rmr:Rmar_2233 flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: D0MDW8 Flagellar basal-body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Deba_1868
symbol: Deba_1868
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005833:IPR005834:IPR006402; KEGG: rci:RCIX511 beta-phosphoglucomutase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q0W6Q6 Beta-phosphoglucomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.


ensembl_gene_id: Deba_1869
symbol: Deba_1869
gene_biotype: protein_coding
description:
  CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462:IPR004570; KEGG: geo:Geob_2837 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: B9M264 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphati [...]


ensembl_gene_id: Deba_1870
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: Deba_1871
symbol: Deba_1871
gene_biotype: protein_coding
description:
  TRASH domain protein; InterPro IPR011017; KEGG: sfu:Sfum_0052 TRASH domain-containing protein; SMART: TRASH domain protein; SPTR: A0LEA3 TRASH domain protein.


ensembl_gene_id: Deba_1872
symbol: Deba_1872
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase; COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: xac:XAC1784 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase; SPTR: B7A5Y7 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFA [...]


ensembl_gene_id: Deba_1873
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: Deba_1874
symbol: Deba_1874
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconateDelta- isomerase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529:IPR011234; KEGG: pmo:Pmob_0980 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; SPTR: A9BJV9 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family.


ensembl_gene_id: Deba_1875
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Deba_1876
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Deba_1877
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Deba_1878
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Deba_1879
symbol: Deba_1879
gene_biotype: protein_coding
description:
  Fibronectin type III domain protein; InterPro IPR003961:IPR008957; KEGG: sus:Acid_1064 fibronectin, type III domain-containing protein; PFAM: Fibronectin type III domain protein; SPTR: Q02A64 Fibronectin, type III domain protein; PFAM: Fibronectin type III domain.


ensembl_gene_id: Deba_1880
symbol: argH
gene_biotype: protein_coding
description:
  COGs: COG0165 Argininosuccinate lyase; InterProIPR020557:IPR003031:IPR000362:IPR008948:IPR 009049; KEGG: dma:DMR_26520 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: C4XUC1 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase.


ensembl_gene_id: Deba_1881
symbol: argG
gene_biotype: protein_coding
description:
  COGs: COG0137 Argininosuccinate synthase; InterPro IPR018223:IPR001518:IPR014729; KEGG: dal:Dalk_0409 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: B8FH30 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: Deba_1882
symbol: Deba_1882
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: Deba_1883
symbol: argD
gene_biotype: protein_coding
description:
  COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterProIPR005814:IPR015424:IPR015422:IPR015421:IPR 004636; KEGG: sfu:Sfum_0063 acetylornithine and succinylornithine aminotransferases; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: A0LEB4 Acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: Deba_1884
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: Deba_1885
symbol: hslU
gene_biotype: protein_coding
description:
  Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: Deba_1886
symbol: hslV
gene_biotype: protein_coding
description:
  20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Deba_1887
symbol: xerC-2
gene_biotype: protein_coding
description:
  Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Deba_1888
symbol: Deba_1888
gene_biotype: protein_coding
description:
  Methyltransferase type 12; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: npu:Npun_F0952 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: B2IUB2 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1889
symbol: Deba_1889
gene_biotype: protein_coding
description:
  COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 020568:IPR009000:IPR009022:IPR014721:IPR004540:IPR005225; KEGG: sfu:Sfum_0068 elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; SPTR: A0LEB9 Translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation  [...]


ensembl_gene_id: Deba_1890
symbol: Deba_1890
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain protein; COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR008284:IPR001453:IPR020817; KEGG: sfu:Sfum_0070 molybdenum cofactor synthesis domain-containing protein; PFAM: molybdopterin binding domain; SPTR: A0LEC1 Molybdopterin adenylyltransferase; TIGRFAM: molybdenum cofactor synthesis domain protein; manually curated; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain.


ensembl_gene_id: Deba_1891
symbol: Deba_1891
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; KEGG: dma:DMR_35880 hypothetical protein; SPTR: C4XLE0 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF296).


ensembl_gene_id: Deba_1892
symbol: Deba_1892
gene_biotype: protein_coding
description:
  COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR013785; KEGG: mta:Moth_0946 2-nitropropane dioxygenase, NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: Q2RJX7 2-nitropropane dioxygenase, NPD; PFAM: 2-nitropropane dioxygenase.


ensembl_gene_id: Deba_1893
symbol: Deba_1893
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR013785:IPR006268; KEGG: tte:TTE1013 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; SPTR: Q8R5T1 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.


ensembl_gene_id: Deba_1894
symbol: Deba_1894
gene_biotype: protein_coding
description:
  Protein of unknown function DUF82; COGs: COG1656 conserved hypothetical protein; InterPro IPR002782; KEGG: sfu:Sfum_0072 hypothetical protein; PFAM: protein of unknown function DUF82; SPTR: A0LEC3 Putative uncharacterized protein; PFAM: Protein of unknown function DUF82.


ensembl_gene_id: Deba_1896
symbol: Deba_1896
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterProIPR019734:IPR013105:IPR001440:IPR011717:IPR 013026:IPR011990; KEGG: sfu:Sfum_0074 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide repeat; SPTR: A0LEC5 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.


ensembl_gene_id: Deba_1897
symbol: Deba_1897
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Deba_1898
symbol: Deba_1898
gene_biotype: protein_coding
description:
  COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: sgr:SGR_2353 putative hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C9ZBT5 Putative hydrolase; PFAM: alpha/beta hydrolase fold.


ensembl_gene_id: Deba_1901
symbol: Deba_1901
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: adg:Adeg_0480 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: C9RBK4 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Deba_1902
symbol: Deba_1902
gene_biotype: protein_coding
description:
  ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Deba_1903
symbol: Deba_1903
gene_biotype: protein_coding
description:
  COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: tpd:Teth39_0754 NifU domain-containing protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: B0K8A0 Nitrogen-fixing NifU domain protein; PFAM: NifU-like domain.


ensembl_gene_id: Deba_1904
symbol: Deba_1904
gene_biotype: protein_coding
description:
  COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: dal:Dalk_2448 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FB55 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Deba_1905
symbol: Deba_1905
gene_biotype: protein_coding
description:
  VWA containing CoxE family protein; COGs: COG3825 conserved hypothetical protein; InterPro IPR008912; KEGG: gme:Gmet_0107 hypothetical protein; PFAM: VWA containing CoxE family protein; SPTR: Q39ZG8 Putative uncharacterized protein; PFAM: VWA domain containing CoxE-like protein.


ensembl_gene_id: Deba_1906
symbol: Deba_1906
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; COGs: COG0714 MoxR-like ATPase; InterPro IPR003593:IPR003959; KEGG: dae:Dtox_3608 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: C8VW33 AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA).


ensembl_gene_id: Deba_1908
symbol: Deba_1908
gene_biotype: protein_coding
description:
  SSS sodium solute transporter superfamily; COGs: COG0591 Na+/proline symporter; InterPro IPR018212:IPR001734:IPR019900; KEGG: dsa:Desal_1510 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: C6BS96 Na+/solute symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Deba_1910
symbol: Deba_1910
gene_biotype: protein_coding
description:
  COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: mxa:MXAN_5908 histone deacetylase family protein; PFAM: histone deacetylase superfamily; SPTR: Q1CZX8 Histone deacetylase family protein; PFAM: Histone deacetylase domain.


ensembl_gene_id: Deba_1911
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Deba_1912
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Deba_1913
symbol: Deba_1913
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein LOC100014749; SPTR: C5WGG8 Truncated apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.


ensembl_gene_id: Deba_1914
symbol: Deba_1914
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: dal:Dalk_0151 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8FMJ4 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_1915
symbol: Deba_1915
gene_biotype: protein_coding
description:
  COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: bbe:BBR47_28890 hypothetical protein; PFAM: aldo/keto reductase; SPTR: C0ZDK7 Putative uncharacterized protein; PFAM: Aldo/keto reductase family.


ensembl_gene_id: Deba_1916
symbol: Deba_1916
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR020441:IPR001789:IPR003593:IPR 002197:IPR011006:IPR009057; KEGG: drt:Dret_0077 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: C8WZA4 Two component, sigma54 specific, transcriptional regulator, Fis fa [...]


ensembl_gene_id: Deba_1917
symbol: Deba_1917
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003661:IPR003594:IPR009082:IPR 005467; KEGG: sfu:Sfum_0854 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A0LGJ9 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Deba_1918
symbol: pgi
gene_biotype: protein_coding
description:
  Phosphoglucose isomerase (PGI); COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672; KEGG: hor:Hore_19060 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: B8CZD5 Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; Belongs to the GPI family.


ensembl_gene_id: Deba_1920
symbol: Deba_1920
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: dol:Dole_2133 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A8ZU04 AAA ATPase central domain protein; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA).


ensembl_gene_id: Deba_1921
symbol: Deba_1921
gene_biotype: protein_coding
description:
  Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641:IPR016035; KEGG: sfu:Sfum_1691 patatin; PFAM: Patatin; SPTR: A0LIX6 Patatin; PFAM: Patatin-like phospholipase.


ensembl_gene_id: Deba_1922
symbol: rpsU
gene_biotype: protein_coding
description:
  Ribosomal protein S21; InterPro IPR018278:IPR001911; KEGG: pca:Pcar_2255 30S ribosomal protein S21; SPTR: Q1JW03 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; manually curated; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: Deba_1923
symbol: Deba_1923
gene_biotype: protein_coding
description:
  Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: cth:Cthe_0680 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A3DD86 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator.


ensembl_gene_id: Deba_1925
symbol: Deba_1925
gene_biotype: protein_coding
description:
  COGs: COG1362 Aspartyl aminopeptidase; InterPro IPR001948; KEGG: dol:Dole_2226 putative aminopeptidase 1; PFAM: peptidase M18 aminopeptidase I; SPTR: A8ZUJ8 M18 family aminopeptidase; PFAM: Aminopeptidase I zinc metalloprotease (M18).


ensembl_gene_id: Deba_1926
symbol: Deba_1926
gene_biotype: protein_coding
description:
  COGs: COG1189 rRNA methylase; InterPro IPR002942:IPR002877:IPR004538; KEGG: ppd:Ppro_1155 hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein; SPTR: A1AN58 Hemolysin A; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein.


ensembl_gene_id: Deba_1927
symbol: dxs
gene_biotype: protein_coding
description:
  Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Deba_1928
symbol: Deba_1928
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: gsu:GSU1765 geranyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: Q74CA9 Geranyltranstransferase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Deba_1929
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Deba_1930
symbol: Deba_1930
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: dvm:DvMF_0123 peptidase M23; PFAM: Peptidase M23; SPTR: B8DNM7 Peptidase M23; PFAM: Peptidase family M23.


ensembl_gene_id: Deba_1931
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: Deba_1932
symbol: Deba_1932
gene_biotype: protein_coding
description:
  Sporulation domain protein; InterPro IPR007730; KEGG: pla:Plav_0031 sporulation domain-containing protein; PFAM: Sporulation domain protein; SPTR: A7HP21 Sporulation domain protein; PFAM: Sporulation related domain.


ensembl_gene_id: Deba_1933
symbol: Deba_1933
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmA family; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280:IPR002792:IPR016027:IPR001566; KEGG: ppd:Ppro_1783 RNA methyltransferase; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: A1APX5 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltran [...]


ensembl_gene_id: Deba_1934
symbol: Deba_1934
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR003607:IPR013976:IPR006675; KEGG: aoe:Clos_2504 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; SPTR: A8MJQ4 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Deba_1936
symbol: Deba_1936
gene_biotype: protein_coding
description:
  PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173:IPR011611; KEGG: dvm:DvMF_2935 PfkB domain protein; PFAM: PfkB domain protein; SPTR: B8DSB7 PfkB domain protein; PFAM: pfkB family carbohydrate kinase.


ensembl_gene_id: Deba_1938
symbol: Deba_1938
gene_biotype: protein_coding
description:
  Protein of unknown function DUF711; COGs: COG2848 conserved hypothetical protein; InterPro IPR007841; KEGG: adg:Adeg_1269 protein of unknown function DUF711; PFAM: protein of unknown function DUF711; SPTR: C9R7V0 Putative uncharacterized protein; PFAM: Uncharacterized ACR (DUF711).


ensembl_gene_id: Deba_1939
symbol: Deba_1939
gene_biotype: protein_coding
description:
  COGs: COG3830 ACT domain-containing protein; InterPro IPR002912; KEGG: mvu:Metvu_1156 ACT domain-containing protein; PFAM: amino acid-binding ACT domain protein; SPTR: C9RHG2 ACT domain-containing protein; PFAM: ACT domain.


ensembl_gene_id: Deba_1940
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Deba_1941
symbol: Deba_1941
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: Deba_1942
symbol: Deba_1942
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR003660:IPR004089:IPR013163; KEGG: gme:Gmet_1078 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Q39WQ6 Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_1943
symbol: Deba_1943
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: dol:Dole_2835 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8ZY11 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; Belongs to the LOG family.


ensembl_gene_id: Deba_1944
symbol: Deba_1944
gene_biotype: protein_coding
description:
  RNA-metabolising metallo-beta-lactamase; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: dal:Dalk_2789 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: B8FKV9 RNA-metabolising metallo-beta-lactamase; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.


ensembl_gene_id: Deba_1945
symbol: Deba_1945
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2344; COGs: COG1032 Fe-S oxidoreductase; InterProIPR006058:IPR006638:IPR007197:IPR018768:IPR 013785; KEGG: pca:Pcar_2585 Fe-S oxidoreductase; PFAM: Protein of unknown function DUF2344; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q3A1D4 Fe-S oxidoreductase; PFAM: Uncharacterized protein conserved in bacteria (DUF2344); Radical SAM superfamily.


ensembl_gene_id: Deba_1946
symbol: Deba_1946
gene_biotype: protein_coding
description:
  Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR019307:IPR016027:IPR012340:IPR004659; KEGG: sfu:Sfum_1609 ribonuclease; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: A0LIP4 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.


ensembl_gene_id: Deba_1947
symbol: Deba_1947
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006089:IPR006092:IPR006091:IPR006090:IPR 009100:IPR009075:IPR013786:IPR013764; KEGG: dat:HRM2_10010 Acd3; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C0QL27 Acd3; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Deba_1948
symbol: Deba_1948
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dal:Dalk_2344 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: B8FAV1 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Deba_1949
symbol: Deba_1949
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: dal:Dalk_2343 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: B8FAV0 Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Deba_1950
symbol: Deba_1950
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; InterPro IPR001387:IPR013096:IPR011051:IPR014710; KEGG: drt:Dret_1668 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C8X3F5 Transcriptional regulator, XRE family; PFAM: Cupin domain; Helix-turn-helix.


ensembl_gene_id: Deba_1951
symbol: Deba_1951
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR002869; KEGG: drt:Dret_0089 pyruvate/ketoisovalerate oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: C0GP42 Pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase.


ensembl_gene_id: Deba_1952
symbol: Deba_1952
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate protein domain protein TPP-binding protein; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: gur:Gura_2238 thiamine pyrophosphate binding domain-containing protein; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A5G3Q3 Thiamine pyrophosphate enzyme domain protein TPP-binding; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.


ensembl_gene_id: Deba_1953
symbol: Deba_1953
gene_biotype: protein_coding
description:
  Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880:IPR009014:IPR015941; KEGG: gme:Gmet_1307 2-ketoisovalerate ferredoxin reductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: Q39W31 Pyruvate flavodoxin/ferredoxin oxidoreductase-like; PFAM: domain.


ensembl_gene_id: Deba_1954
symbol: Deba_1954
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; InterPro IPR017900:IPR001450:IPR017896; KEGG: dde:Dde_0043 2-oxoglutarate ferredoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q317N2 2-oxoglutarate ferredoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Deba_1955
symbol: Deba_1955
gene_biotype: protein_coding
description:
  COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterProIPR014043:IPR016035:IPR016036:IPR001227:IPR 004410; KEGG: dal:Dalk_3440 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: B8FLI2 Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.


ensembl_gene_id: Deba_1956
symbol: Deba_1956
gene_biotype: protein_coding
description:
  Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR011991; KEGG: sfu:Sfum_3768 DtxR family iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; SPTR: A0LPT5 Iron (Metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.


ensembl_gene_id: Deba_1957
symbol: Deba_1957
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: mma:MM_1672 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Q8PWB7 Methyltransferase; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_1958
symbol: Deba_1958
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1239; InterPro IPR010664; KEGG: pca:Pcar_1941 hypothetical protein; PFAM: protein of unknown function DUF1239; SPTR: Q3A375 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1239).


ensembl_gene_id: Deba_1959
symbol: Deba_1959
gene_biotype: protein_coding
description:
  Lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: gme:Gmet_1281 OstA-like protein; PFAM: OstA family protein; SPTR: Q39W57 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA.


ensembl_gene_id: Deba_1960
symbol: Deba_1960
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sat:SYN_00946 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2LSN4 ABC transporter ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_1961
symbol: Deba_1961
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Deba_1962
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: Deba_1963
symbol: Deba_1963
gene_biotype: protein_coding
description:
  Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178:IPR016152; KEGG: sfu:Sfum_2067 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: A0LJZ8 Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.


ensembl_gene_id: Deba_1965
symbol: Deba_1965
gene_biotype: protein_coding
description:
  COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: gur:Gura_2967 PTS system fructose subfamily IIA component; PFAM: PTS system fructose subfamily IIA component; SPTR: A5G5S1 PTS system fructose subfamily IIA component; PFAM: PTS system fructose IIA component.


ensembl_gene_id: Deba_1966
symbol: Deba_1966
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: Deba_1967
symbol: pgk
gene_biotype: protein_coding
description:
  COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR015911:IPR001576:IPR015824:IPR015901; KEGG: gme:Gmet_1947 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Q39U98 Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: Deba_1968
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Deba_1969
symbol: Deba_1969
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Deba_1970
symbol: Deba_1970
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198:IPR016040; KEGG: gsu:GSU0802 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Q1JVF9 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.


ensembl_gene_id: Deba_1971
symbol: Deba_1971
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0016; COGs: COG2119 membrane protein; InterPro IPR001727; KEGG: gvi:gsr0120 hypothetical protein; PFAM: protein of unknown function UPF0016; SPTR: Q7NPD5 Gsr0120 protein; PFAM: Uncharacterized protein family UPF0016.


ensembl_gene_id: Deba_1972
symbol: Deba_1972
gene_biotype: protein_coding
description:
  rRNA (guanine-N(2)-)-methyltransferase; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR002052:IPR000241; KEGG: sfu:Sfum_1764 putative RNA methylase; PFAM: putative RNA methylase; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: A0LJ49 Putative RNA methylase; PFAM: Putative RNA methylase family UPF0020.


ensembl_gene_id: Deba_1973
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: Deba_1974
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Deba_1975
symbol: Deba_1975
gene_biotype: protein_coding
description:
  COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: hoh:Hoch_4973 DNA photolyase FAD-binding protein; PFAM: DNA photolyase FAD-binding; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: D0LU98 DNA photolyase FAD-binding protein; PFAM: FAD binding domain of DNA photolyase; TIGRFAM: photolyase PhrII.


ensembl_gene_id: Deba_1976
symbol: Deba_1976
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1722; COGs: COG3272 conserved hypothetical protein; InterPro IPR007553:IPR013560:IPR017087; KEGG: sat:SYN_02271 putative cytoplasmic protein; PFAM: Protein of unknown function DUF1722; protein of unknown function DUF523; SPTR: Q2LQU0 Hypothetical cytosolic protein; PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722).


ensembl_gene_id: Deba_1977
symbol: glyS
gene_biotype: protein_coding
description:
  COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR002311:IPR008909:IPR006194:IPR015944; KEGG: gsu:GSU0579 glycyl-tRNA synthetase subunit beta; PFAM: glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain protein; PRIAM: Glycine--tRNA ligase; SPTR: Q1K046 Glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit.


ensembl_gene_id: Deba_1978
symbol: glyQ
gene_biotype: protein_coding
description:
  COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR002310:IPR006194; KEGG: sat:SYN_01536 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: Q2LVI0 Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit.


ensembl_gene_id: Deba_1979
symbol: Deba_1979
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterProIPR004838:IPR001176:IPR004839:IPR015424:IPR 015421; KEGG: rsd:TGRD_536 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: B1H0I7 Aspartate aminotransferase; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Deba_1980
symbol: Deba_1980
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; InterPro IPR009875; KEGG: dat:HRM2_37380 hypothetical protein; PFAM: type IV pilus assembly PilZ; SPTR: C8R280 Type IV pilus assembly PilZ; PFAM: PilZ domain.


ensembl_gene_id: Deba_1981
symbol: thi4
gene_biotype: protein_coding
description:
  Thiazole biosynthesis enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur.


ensembl_gene_id: Deba_1982
symbol: Deba_1982
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterProIPR019734:IPR001440:IPR013105:IPR011717:IPR 013026:IPR011990; KEGG: sfu:Sfum_1501 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SPTR: A0LID8 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.


ensembl_gene_id: Deba_1983
symbol: Deba_1983
gene_biotype: protein_coding
description:
  COGs: COG1639 signal transduction protein; InterPro IPR013976; KEGG: dma:DMR_03330 hypothetical protein; PFAM: Metal-dependent hydrolase HDOD; SPTR: C4XH56 Putative uncharacterized protein; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Deba_1984
symbol: Deba_1984
gene_biotype: protein_coding
description:
  Type II secretion system F domain protein; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: rfr:Rfer_0801 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Q220K2 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Deba_1985
symbol: Deba_1985
gene_biotype: protein_coding
description:
  Type II secretion system F domain protein; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: pol:Bpro_2556 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: B7WWM6 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: Deba_1986
symbol: Deba_1986
gene_biotype: protein_coding
description:
  Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR017975:IPR001482; KEGG: dde:Dde_2363 type II/IV secretion system protein; PFAM: type II secretion system protein E; SPTR: Q30YT6 Type II/IV secretion system protein; PFAM: Type II/IV secretion system protein.


ensembl_gene_id: Deba_1987
symbol: Deba_1987
gene_biotype: protein_coding
description:
  COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: pol:Bpro_2554 response regulator receiver domain-containing protein; SPTR: Q12AH2 Response regulator receiver domain protein (CheY-like); PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_1988
symbol: Deba_1988
gene_biotype: protein_coding
description:
  KEGG: dps:DP1532 hypothetical protein; SPTR: Q6AN13 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2134).


ensembl_gene_id: Deba_1989
symbol: Deba_1989
gene_biotype: protein_coding
description:
  Type II and III secretion system protein; COGs: COG4964 Flp pilus assembly protein secretin CpaC; InterPro IPR001775:IPR007055:IPR004846; KEGG: dvl:Dvul_1112 type II and III secretion system protein; PFAM: type II and III secretion system protein; transport-associated; SPTR: Q72A78 Type II/III secretion system protein; PFAM: Putative phospholipid-binding domain; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.


ensembl_gene_id: Deba_1990
symbol: Deba_1990
gene_biotype: protein_coding
description:
  COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR013974:IPR017592; KEGG: ctt:CtCNB1_2104 pilus assembly transmembrane protein; PFAM: SAF domain protein; SPTR: B7WWL6 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.


ensembl_gene_id: Deba_1991
symbol: Deba_1991
gene_biotype: protein_coding
description:
  TadE family protein; InterPro IPR012495; KEGG: bph:Bphy_5858 TadE family protein; PFAM: TadE family protein; SPTR: B2JVE5 TadE family protein; PFAM: TadE-like protein.


ensembl_gene_id: Deba_1992
symbol: Deba_1992
gene_biotype: protein_coding
description:
  InterPro IPR000045; KEGG: aca:ACP_1104 type IV prepilin leader peptidase family protein; PFAM: peptidase A24A prepilin type IV; SPTR: C1F476 Type IV prepilin leader peptidase family protein; PFAM: Type IV leader peptidase family.


ensembl_gene_id: Deba_1993
symbol: Deba_1993
gene_biotype: protein_coding
description:
  KEGG: ade:Adeh_2831 Flp/Fap pilin component; SPTR: Q2ILS4 Flp/Fap pilin component; PFAM: Flp/Fap pilin component.


ensembl_gene_id: Deba_1994
symbol: Deba_1994
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR020441:IPR001789:IPR003593:IPR 002197:IPR011006:IPR009057; KEGG: sfu:Sfum_3765 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: A0LPT2 Two component, sigma54 specific, transcriptional regulator, Fis fam [...]


ensembl_gene_id: Deba_1995
symbol: Deba_1995
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR018247:IPR004358:IPR001789:IPR000014:IPR 001610:IPR003661:IPR003594:IPR013656:IPR013655:IPR011006:I PR009082:IPR005467:IPR000700; KEGG: sfu:Sfum_2943 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regula [...]


ensembl_gene_id: Deba_1996
symbol: Deba_1996
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; COGs: COG3322 periplasmic ligand-binding sensor domain; InterProIPR004358:IPR003660:IPR003594:IPR007892:IPR 005467; KEGG: dba:Dbac_3141 diguanylate cyclase; PFAM: CHASE4 domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SPTR: C5S8H6 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CHASE4 domain.


ensembl_gene_id: Deba_1997
symbol: Deba_1997
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: ppd:Ppro_1137 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A1AN41 Uncharacterized domain 1; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Deba_1998
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: Deba_1999
symbol: Deba_1999
gene_biotype: protein_coding
description:
  Protein of unknown function DUF181; COGs: COG1944 conserved hypothetical protein; InterProIPR019734:IPR003776:IPR001440:IPR013105:IPR 013026:IPR011990; KEGG: dol:Dole_1241 hypothetical protein; PFAM: protein of unknown function DUF181; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SPTR: A8ZY40 Putative uncharacterized protein; PFAM: YcaO-like family; Tetratricopeptide repeat; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.


ensembl_gene_id: Deba_2000
symbol: Deba_2000
gene_biotype: protein_coding
description:
  Sulfur relay protein, TusE/DsrC/DsvC family; COGs: COG2920 Dissimilatory sulfite reductase (desulfoviridin) gamma subunit; InterPro IPR007453; KEGG: drt:Dret_1739 sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; PRIAM: Hydrogensulfite reductase; SPTR: C0GTM7 Sulfur relay protein, TusE/DsrC/DsvC family; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family.


ensembl_gene_id: Deba_2001
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Deba_2002
symbol: Deba_2002
gene_biotype: protein_coding
description:
  Putative CheA signal transduction histidine kinase; KEGG: dvu:DVU3172 hypothetical protein; SPTR: Q725K1 Putative uncharacterized protein.


ensembl_gene_id: Deba_2003
symbol: nfo
gene_biotype: protein_coding
description:
  Apurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: Deba_2004
symbol: Deba_2004
gene_biotype: protein_coding
description:
  InterPro IPR000428:IPR006121; KEGG: dal:Dalk_3004 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; SPTR: B8FL59 Heavy metal transport/detoxification protein; PFAM: Heavy-metal-associated domain.


ensembl_gene_id: Deba_2005
symbol: Deba_2005
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR018303:IPR001757:IPR001877:IPR001756:IPR 006121:IPR008250:IPR005834:IPR006122:IPR006403:IPR006416; KEGG: dal:Dalk_3003 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: B8FL58 Heavy metal translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD sup [...]


ensembl_gene_id: Deba_2006
symbol: Deba_2006
gene_biotype: protein_coding
description:
  COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: mem:Memar_2469 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: D1JH80 Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Deba_2007
symbol: Deba_2007
gene_biotype: protein_coding
description:
  Protein of unknown function DUF124; COGs: COG2013 conserved hypothetical protein; InterPro IPR002838:IPR016031; KEGG: amr:AM1_1071 hypothetical protein; PFAM: protein of unknown function DUF124; SPTR: B0C1U4 Putative uncharacterized protein; PFAM: Protein of unknown function DUF124; TIGRFAM: conserved hypothetical protein TIGR00266.


ensembl_gene_id: Deba_2008
symbol: Deba_2008
gene_biotype: protein_coding
description:
  KEGG: geo:Geob_1673 protein of unknown function DUF559; SPTR: B9M650 Putative uncharacterized protein.


ensembl_gene_id: Deba_2009
symbol: Deba_2009
gene_biotype: protein_coding
description:
  SNARE associated Golgi protein-related protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: pol:Bpro_3150 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: C9PD86 DedA family protein; PFAM: SNARE associated Golgi protein.


ensembl_gene_id: Deba_2010
symbol: Deba_2010
gene_biotype: protein_coding
description:
  KEGG: sus:Acid_5380 hypothetical protein; SPTR: Q01VI6 Putative uncharacterized protein; PFAM: Disulphide bond corrector protein DsbC.


ensembl_gene_id: Deba_2011
symbol: Deba_2011
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR015424; KEGG: ttj:TTHA0934 glutamate-1-semialdehyde 2,1-aminomutase (GSA) (glutamate-1-semialdehyde aminotransferase) (GSA-AT); SPTR: Q5SJS4 Glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III.


ensembl_gene_id: Deba_2012
symbol: Deba_2012
gene_biotype: protein_coding
description:
  InterPro IPR005186; KEGG: nis:NIS_0641 flagellar protein FlaG; PFAM: flagellar protein FlaG protein; SPTR: Q9ZFD5 FlaG (Fragment); PFAM: FlaG protein.


ensembl_gene_id: Deba_2013
symbol: Deba_2013
gene_biotype: protein_coding
description:
  Response regulator receiver modulated metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterProIPR001789:IPR003018:IPR003607:IPR006674:IPR 011006; KEGG: sfu:Sfum_3292 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD region; SPTR: A0LNG3 Response regulator receiver modulated metal dependent phosphohydrolase; PFAM: HD domain; Response regulator receiver domain [...]


ensembl_gene_id: Deba_2014
symbol: Deba_2014
gene_biotype: protein_coding
description:
  InterPro IPR009875; KEGG: dba:Dbac_0482 type IV pilus assembly PilZ; PFAM: type IV pilus assembly PilZ; SPTR: C0GRU4 Type IV pilus assembly PilZ; PFAM: PilZ domain.


ensembl_gene_id: Deba_2015
symbol: Deba_2015
gene_biotype: protein_coding
description:
  Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR005467; KEGG: tye:THEYE_A0747 sensor histidine kinase, putative; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B5YK24 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Deba_2016
symbol: Deba_2016
gene_biotype: protein_coding
description:
  PBS lyase HEAT domain protein repeat-containing protein; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR016024:IPR011989; KEGG: dds:Ddes_1378 heat domain containing protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: B8J0K3 HEAT domain containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat.


ensembl_gene_id: Deba_2017
symbol: Deba_2017
gene_biotype: protein_coding
description:
  COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR011006; KEGG: lip:LI1142 CheY-like receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q1MP81 CheY-like receiver; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_2018
symbol: Deba_2018
gene_biotype: protein_coding
description:
  COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterProIPR001789:IPR019734:IPR013105:IPR001440:IPR 011006:IPR013026:IPR011990; KEGG: dal:Dalk_2142 response regulator receiver protein; PFAM: response regulator receiver; Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: response regulator receiver; Tetratricopeptide repeat; SPTR: C8QWV9 Response regulator receiver protein; PFAM: Response regulator receiver domain; Tetratricopeptide repeat.


ensembl_gene_id: Deba_2019
symbol: Deba_2019
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481:IPR007167:IPR008988; KEGG: dal:Dalk_1640 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; FeoA family protein; SPTR: B8FAP2 Ferric uptake regulator, Fur family; PFAM: FeoA domain; Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Deba_2020
symbol: Deba_2020
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR019546:IPR001450:IPR017909:IPR017896:IPR 006311; KEGG: dal:Dalk_1084 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Twin-arginine translocation pathway, signal sequence, subgroup; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8F941 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.


ensembl_gene_id: Deba_2021
symbol: Deba_2021
gene_biotype: protein_coding
description:
  KEGG: dal:Dalk_1085 iron-sulfur cluster-binding protein; SPTR: B8F942 Iron-sulfur cluster-binding protein.


ensembl_gene_id: Deba_2022
symbol: Deba_2022
gene_biotype: protein_coding
description:
  COGs: COG0247 Fe-S oxidoreductase; InterPro IPR017900:IPR004017:IPR009051:IPR012285; KEGG: dae:Dtox_1734 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: C8VX15 Putative uncharacterized protein; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_2023
symbol: Deba_2023
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: Gm6927; predicted gene 6927; SPTR: C2C2T9 CDF family cation diffusion facilitator CzrB.


ensembl_gene_id: Deba_2024
symbol: Deba_2024
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR013785; KEGG: sfu:Sfum_1744 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A0LJ29 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_2025
symbol: Deba_2025
gene_biotype: protein_coding
description:
  Protein of unknown function DUF81; InterPro IPR002781; KEGG: dat:HRM2_08600 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: C0QKA2 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE.


ensembl_gene_id: Deba_2026
symbol: Deba_2026
gene_biotype: protein_coding
description:
  ErfK/YbiS/YcfS/YnhG family protein; COGs: COG3786 conserved hypothetical protein; InterPro IPR005490; KEGG: rce:RC1_2938 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: B6IVI2 Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain.


ensembl_gene_id: Deba_2027
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Deba_2028
symbol: Deba_2028
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase/NADH oxidase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155:IPR013785; KEGG: gur:Gura_4410 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: C8R0Q8 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family.


ensembl_gene_id: Deba_2029
symbol: Deba_2029
gene_biotype: protein_coding
description:
  COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: gsu:GSU0913 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q74EP9 ABC transporter, ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Deba_2030
symbol: Deba_2030
gene_biotype: protein_coding
description:
  COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: ava:Ava_B0091 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Q3M2I3 Restriction endonuclease; PFAM: Restriction endonuclease.


ensembl_gene_id: Deba_2031
symbol: Deba_2031
gene_biotype: protein_coding
description:
  Choloylglycine hydrolase; COGs: COG3049 Penicillin V acylase and related amidase; InterPro IPR003199; KEGG: sun:SUN_1118 choloylglycine hydrolase; PFAM: Choloylglycine hydrolase; PRIAM: Choloylglycine hydrolase; SPTR: A6Q9B4 Choloylglycine hydrolase; PFAM: Linear amide C-N hydrolases, choloylglycine hydrolase family.


ensembl_gene_id: Deba_2032
symbol: Deba_2032
gene_biotype: protein_coding
description:
  COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: geo:Geob_0543 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: B9LZU6 Thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC.


ensembl_gene_id: Deba_2033
symbol: Deba_2033
gene_biotype: protein_coding
description:
  COGs: COG0515 Serine/threonine protein kinase; InterProIPR002290:IPR017442:IPR013229:IPR011009:IPR 019734:IPR000719:IPR013026; KEGG: rca:Rcas_0525 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PEGA domain protein; SMART: serine/threonine protein kinase; SPTR: A6C267 Serine/threonine protein kinase; PFAM: Protein kinase domain; PEGA domain.


ensembl_gene_id: Deba_2034
symbol: Deba_2034
gene_biotype: protein_coding
description:
  COGs: COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; InterPro IPR005546:IPR006315; KEGG: dol:Dole_2458 outer membrane autotransporter; PFAM: Autotransporter beta- domain protein; SPTR: A8ZW28 Outer membrane autotransporter barrel domain; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain.


ensembl_gene_id: Deba_2035
symbol: Deba_2035
gene_biotype: protein_coding
description:
  NLP/P60 protein; InterPro IPR000064; KEGG: sfu:Sfum_0991 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: A0LGY4 NLP/P60 protein; PFAM: NlpC/P60 family.


ensembl_gene_id: Deba_2036
symbol: Deba_2036
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: dat:HRM2_24110 Isf; PFAM: NADPH-dependent FMN reductase; SPTR: C0QFT7 Isf; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Deba_2038
symbol: Deba_2038
gene_biotype: protein_coding
description:
  Smr protein/MutS2; COGs: COG2840 conserved hypothetical protein; InterPro IPR002625; KEGG: dma:DMR_30700 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; SPTR: C4XII6 Putative uncharacterized protein; PFAM: Smr domain.


ensembl_gene_id: Deba_2040
symbol: Deba_2040
gene_biotype: protein_coding
description:
  InterPro IPR007419; KEGG: tai:Taci_1540 BFD domain protein (2Fe-2S)-binding domain protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: D1B6X0 BFD domain protein (2Fe-2S)-binding domain protein; PFAM: BFD-like [2Fe-2S] binding domain.


ensembl_gene_id: Deba_2041
symbol: Deba_2041
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG3640 CO dehydrogenase maturation factor; InterPro IPR002586:IPR014433; KEGG: sfu:Sfum_4099 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A0LQR2 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_2042
symbol: Deba_2042
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gur:Gura_2340 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A5G401 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_2043
symbol: Deba_2043
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterPro IPR001647:IPR009057:IPR012287; KEGG: pag:PLES_03641 putative transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q9I6C7 Probable transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_2044
symbol: Deba_2044
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; COGs: COG2015 Alkyl sulfatase and related hydrolase; InterPro IPR016083; KEGG: dal:Dalk_0128 beta-lactamase domain protein; SPTR: B8FKM3 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; SCP-2 sterol transfer family.


ensembl_gene_id: Deba_2045
symbol: Deba_2045
gene_biotype: protein_coding
description:
  Protein of unknown function DUF192; COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: rce:RC1_1079 hypothetical protein; PFAM: protein of unknown function DUF192; SPTR: B4VP74 Uncharacterized ACR, COG1430, putative; PFAM: Uncharacterized ACR, COG1430.


ensembl_gene_id: Deba_2046
symbol: Deba_2046
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: dvm:DvMF_1479 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: B8DLQ1 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.


ensembl_gene_id: Deba_2047
symbol: Deba_2047
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR016024:IPR011989; KEGG: dal:Dalk_2376 hypothetical protein; SPTR: Q1NTE0 HEAT.


ensembl_gene_id: Deba_2048
symbol: Deba_2048
gene_biotype: protein_coding
description:
  Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR016440; KEGG: sfu:Sfum_3253 flavodoxin/nitric oxide synthase; PFAM: flavodoxin/nitric oxide synthase; SPTR: C8R2S6 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.


ensembl_gene_id: Deba_2049
symbol: Deba_2049
gene_biotype: protein_coding
description:
  Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR018527:IPR001052:IPR004039; KEGG: dvl:Dvul_0203 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Q46496 Rubredoxin; PFAM: Rubredoxin.


ensembl_gene_id: Deba_2050
symbol: dfx
gene_biotype: protein_coding
description:
  Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity.


ensembl_gene_id: Deba_2051
symbol: Deba_2051
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1592 Rubrerythrin; InterProIPR003251:IPR009078:IPR004039:IPR009040:IPR 012347; KEGG: dol:Dole_2647 rubrerythrin; PFAM: Rubrerythrin; SPTR: A8ZX71 Rubrerythrin; PFAM: Rubrerythrin.


ensembl_gene_id: Deba_2053
symbol: fur-2
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: drt:Dret_0141 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: C8R2S3 Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Deba_2054
symbol: queC
gene_biotype: protein_coding
description:
  exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: Deba_2056
symbol: Deba_2056
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: pay:PAU_03719 high-affinity branched-chain amino acid transport atp-binding protein LivF; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7BLV1 High-affinity branched-chain amino acid transport atp-binding protein livf; PFAM: ABC transporter.


ensembl_gene_id: Deba_2057
symbol: Deba_2057
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: pcl:Pcal_0845 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B7A702 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.


ensembl_gene_id: Deba_2058
symbol: Deba_2058
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: sti:Sthe_1537 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1C405 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_2059
symbol: Deba_2059
gene_biotype: protein_coding
description:
  Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR000408:IPR001851; KEGG: hwa:HQ3183A ABC-type branched-chain amino acid transport system, permease protein I; PFAM: inner-membrane translocator; SPTR: Q18FH5 ABC-type branched-chain amino acid transport system, permease protein I; PFAM: Branched-chain amino acid transport system / permease component.


ensembl_gene_id: Deba_2060
symbol: Deba_2060
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: tye:THEYE_A0768 leu/ile/val-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Q649G6 Putative uncharacterized protein; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Deba_2061
symbol: Deba_2061
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: dal:Dalk_3701 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: B8FLN5 Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Deba_2063
symbol: grpE
gene_biotype: protein_coding
description:
  GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: Deba_2064
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: Deba_2065
symbol: Deba_2065
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ade:Adeh_3450 WD-40 repeat-containing serine/threonin protein kinase; SPTR: Q2IF56 Serine/threonine protein kinase with WD40 repeats.


ensembl_gene_id: Deba_2066
symbol: Deba_2066
gene_biotype: protein_coding
description:
  Protein of unknown function CGGC region; COGs: COG5561 metal-binding protein; InterPro IPR014925; KEGG: dol:Dole_0580 hypothetical protein; PFAM: Protein of unknown function CGGC region; SPTR: A8ZU78 Putative uncharacterized protein; PFAM: CGGC domain.


ensembl_gene_id: Deba_2067
symbol: Deba_2067
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR013785; KEGG: dal:Dalk_0090 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B8FKI5 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_2068
symbol: Deba_2068
gene_biotype: protein_coding
description:
  KEGG: dsa:Desal_1340 hypothetical protein; SPTR: C6C206 Putative uncharacterized protein; manually curated.


ensembl_gene_id: Deba_2069
symbol: Deba_2069
gene_biotype: protein_coding
description:
  COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504:IPR012677; KEGG: dma:DMR_11610 RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: C4XLR4 RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).


ensembl_gene_id: Deba_2070
symbol: Deba_2070
gene_biotype: protein_coding
description:
  Wyosine base formation; InterPro IPR017518:IPR017517; KEGG: dal:Dalk_2661 wyosine base formation; SPTR: B8FIW2 Wyosine base formation; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: conserved hypothetical protein TIGR03084; uncharacterized Actinobacterial protein TIGR03083.


ensembl_gene_id: Deba_2071
symbol: Deba_2071
gene_biotype: protein_coding
description:
  KEGG: vex:VEA_002959 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA; SPTR: Q87MY5 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.


ensembl_gene_id: Deba_2073
symbol: Deba_2073
gene_biotype: protein_coding
description:
  Membrane bound O-acyl transferase MBOAT family protein; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: rpt:Rpal_2846 membrane bound O-acyl transferase MBOAT family protein; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: Q6N6N7 Putative alginate o-acetyltransferase AlgI; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: Deba_2074
symbol: Deba_2074
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rpd:RPD_0465 alginate O-acetyltransferase AlgJ; SPTR: Q13DY6 Putative AlgJ protein, required for O-acetylation of alginate in Pseudomonas aeruginosa.


ensembl_gene_id: Deba_2075
symbol: Deba_2075
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: afw:Anae109_2230 RNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: A7HCI6 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase  [...]


ensembl_gene_id: Deba_2077
symbol: Deba_2077
gene_biotype: protein_coding
description:
  Protein of unknown function DUF370; COGs: COG2052 conserved hypothetical protein; InterPro IPR007169; KEGG: dma:DMR_32850 hypothetical protein; PFAM: protein of unknown function DUF370; SPTR: C4XJM9 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF370); Belongs to the RemA family.


ensembl_gene_id: Deba_2078
symbol: Deba_2078
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1732; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: gem:GM21_1049 YicC domain protein; PFAM: domain of unknown function DUF1732; YicC domain protein; SPTR: C6E2G4 YicC domain protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255.


ensembl_gene_id: Deba_2080
symbol: Deba_2080
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterProIPR001732:IPR014026:IPR014027:IPR016040:IPR 008927:IPR013328:IPR017476; KEGG: tye:THEYE_A0998 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: B5YKR5 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domai [...]


ensembl_gene_id: Deba_2081
symbol: Deba_2081
gene_biotype: protein_coding
description:
  O-antigen polymerase; InterPro IPR018271:IPR007016; KEGG: tye:THEYE_A0427 O-antigen polymerase family; PFAM: O-antigen polymerase; SPTR: B5YJ59 O-Antigen Polymerase family; PFAM: O-Antigen ligase.


ensembl_gene_id: Deba_2082
symbol: Deba_2082
gene_biotype: protein_coding
description:
  rfaE bifunctional protein; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011611:IPR011913; KEGG: sfu:Sfum_3634 ribokinase-like domain-containing protein; PFAM: PfkB domain protein; SPTR: A0LPF2 PfkB domain protein; TIGRFAM: rfaE bifunctional protein; PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I.


ensembl_gene_id: Deba_2083
symbol: Deba_2083
gene_biotype: protein_coding
description:
  COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: tye:THEYE_A0426 glycosyl transferase, family 9; PFAM: glycosyl transferase family 9; SPTR: B5YJ58 Glycosyl transferase, family 9; PFAM: Glycosyltransferase family 9 (heptosyltransferase).


ensembl_gene_id: Deba_2084
symbol: Deba_2084
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rrs:RoseRS_0847 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: A5URK7 Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_2085
symbol: Deba_2085
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR018062:IPR001296; KEGG: acr:Acry_1805 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: A5FZH6 Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_2086
symbol: Deba_2086
gene_biotype: protein_coding
description:
  COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: dar:Daro_0157 glycosyl transferase family protein; PFAM: glycosyl transferase family 9; SPTR: Q47JR5 Glycosyl transferase, family 9; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II.


ensembl_gene_id: Deba_2087
symbol: Deba_2087
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dar:Daro_0153 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: B9YYN8 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Deba_2088
symbol: Deba_2088
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase III; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201:IPR011916; KEGG: sfu:Sfum_0370 lipopolysaccharide heptosyltransferase III, putative; PFAM: glycosyl transferase family 9; SPTR: B9YYN7 Lipopolysaccharide heptosyltransferase III; TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, putative.


ensembl_gene_id: Deba_2089
symbol: Deba_2089
gene_biotype: protein_coding
description:
  Protein of unknown function DUF343; InterPro IPR005651; KEGG: dol:Dole_1914 hypothetical protein; PFAM: protein of unknown function DUF343; SPTR: A8ZSI1 Putative uncharacterized protein; Belongs to the UPF0434 family.


ensembl_gene_id: Deba_2090
symbol: Deba_2090
gene_biotype: protein_coding
description:
  COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201:IPR011908; KEGG: tye:THEYE_A0945 lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: A1HRG7 Lipopolysaccharide heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II.


ensembl_gene_id: Deba_2091
symbol: Deba_2091
gene_biotype: protein_coding
description:
  Histidinol-phosphate phosphatase family protein; COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR005834:IPR006543:IPR006549; KEGG: ppd:Ppro_2549 HAD superfamily hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A1AS33 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain.


ensembl_gene_id: Deba_2092
symbol: Deba_2092
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase II; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201:IPR011910; KEGG: gsu:GSU2256 ADP-heptose--LPS heptosyltransferase II, putative; PFAM: glycosyl transferase family 9; SPTR: Q74AU4 ADP-heptose--LPS heptosyltransferase II, putative; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II.


ensembl_gene_id: Deba_2093
symbol: Deba_2093
gene_biotype: protein_coding
description:
  COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: sfu:Sfum_0376 lipid A biosynthesis acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: A0LF74 Lipid A biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase.


ensembl_gene_id: Deba_2094
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: Deba_2095
symbol: Deba_2095
gene_biotype: protein_coding
description:
  Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: Deba_2096
symbol: Deba_2096
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; InterPro IPR002509:IPR011330; KEGG: gme:Gmet_0882 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Q39XA0 Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase.


ensembl_gene_id: Deba_2097
symbol: Deba_2097
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gme:Gmet_0885 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Q39X97 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_2098
symbol: Deba_2098
gene_biotype: protein_coding
description:
  Glycosyl transferase family 39; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: gme:Gmet_0887 glycosyl transferase family protein; PFAM: glycosyl transferase family 39; SPTR: Q39X95 Glycosyl transferase, family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.


ensembl_gene_id: Deba_2099
symbol: Deba_2099
gene_biotype: protein_coding
description:
  Glycosyl transferase family 39; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: tgr:Tgr7_3093 glycosyl transferase family 39; PFAM: glycosyl transferase family 39; SPTR: B8GQ15 Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.


ensembl_gene_id: Deba_2100
symbol: Deba_2100
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; InterPro IPR000326:IPR016118; KEGG: tye:THEYE_A1814 lipid A 1-phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: B5K7V0 PAP2 superfamily protein; PFAM: PAP2 superfamily.


ensembl_gene_id: Deba_2101
symbol: Deba_2101
gene_biotype: protein_coding
description:
  Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family.


ensembl_gene_id: Deba_2102
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Deba_2103
symbol: Deba_2103
gene_biotype: protein_coding
description:
  Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR016040; KEGG: aeh:Mlg_0316 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Q0ABW6 Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.


ensembl_gene_id: Deba_2104
symbol: Deba_2104
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1009; COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: dat:HRM2_22450 hypothetical protein; PFAM: protein of unknown function DUF1009; SPTR: C0QEK1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1009).


ensembl_gene_id: Deba_2105
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Deba_2106
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Deba_2107
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: Deba_2108
symbol: Deba_2108
gene_biotype: protein_coding
description:
  InterPro IPR005632; KEGG: drt:Dret_2230 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: C8X517 Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like).


ensembl_gene_id: Deba_2109
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: Deba_2110
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: Deba_2111
symbol: Deba_2111
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, transmembrane protein, LolC/E family; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838:IPR011925; KEGG: sfu:Sfum_3743 LolC/E family lipoprotein releasing system, transmembrane protein; PFAM: protein of unknown function DUF214; SPTR: A0LPR1 Lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family.


ensembl_gene_id: Deba_2112
symbol: lysS
gene_biotype: protein_coding
description:
  COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR018149:IPR004365:IPR004364:IPR016027:IPR 006195:IPR012340:IPR002313; KEGG: drt:Dret_2234 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: C8X521 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Deba_2115
symbol: Deba_2115
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1150 Heterodisulfide reductase subunit C; InterProIPR009051:IPR012285:IPR017896:IPR017900:IPR 006655; KEGG: dal:Dalk_5066 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FDV6 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Nitrate reductase gamma subunit.


ensembl_gene_id: Deba_2116
symbol: Deba_2116
gene_biotype: protein_coding
description:
  Protein of unknown function DUF362; COGs: COG2006 conserved hypothetical protein; InterPro IPR007160:IPR006311; KEGG: dvm:DvMF_2714 protein of unknown function DUF362; PFAM: protein of unknown function DUF362; SPTR: B8DIZ2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362).


ensembl_gene_id: Deba_2117
symbol: Deba_2117
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0348 Polyferredoxin; InterPro IPR017896:IPR017900:IPR001450; KEGG: dvm:DvMF_2713 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C0GLH2 4Fe-4S ferredoxin iron-sulfur binding domain protein; TIGRFAM: MauM/NapG family ferredoxin-type protein.


ensembl_gene_id: Deba_2118
symbol: Deba_2118
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: GI18852 gene product from transcript GI18852-RA; K13174 THO complex subunit 5; SPTR: D0GTE2 ATP-dependent helicase HrpB.


ensembl_gene_id: Deba_2119
symbol: Deba_2119
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR009010:IPR006656:IPR006657; KEGG: sfu:Sfum_0031 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: A0LE82 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Deba_2120
symbol: Deba_2120
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR017896:IPR017900:IPR006655:IPR 000283:IPR019574:IPR001450:IPR006963:IPR006656; KEGG: dat:HRM2_16870 FdhA5; PFAM: molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: C0QAZ5 FdhA5; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G  [...]


ensembl_gene_id: Deba_2121
symbol: Deba_2121
gene_biotype: protein_coding
description:
  COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: mem:Memar_2456 beta-lactamase domain-containing protein; SPTR: A3CYC7 Beta-lactamase domain protein; manually curated; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_2122
symbol: acsA
gene_biotype: protein_coding
description:
  acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: Deba_2123
symbol: Deba_2123
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; InterPro IPR016196:IPR011701; KEGG: gsu:GSU2490 oxalate/formate antiporter, putative; PFAM: major facilitator superfamily MFS_1; SPTR: Q74AA0 Oxalate/formate antiporter, putative; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Deba_2124
symbol: Deba_2124
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR011006:IPR009057:IPR002078:IPR001789:IPR 003593:IPR002197; KEGG: dat:HRM2_01260 sigma-54 dependent DNA-binding response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: C0QED2 Sigma-54 dependent DNA-binding response regulator; PFAM: Response regulator receiver domain; Sig [...]


ensembl_gene_id: Deba_2125
symbol: Deba_2125
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003594:IPR009082:IPR004358:IPR005467:IPR 000014:IPR000700:IPR003661:IPR013163:IPR013656:IPR013767; KEGG: dat:HRM2_07890 two domain sensory box histidine kinase (methyl-accepting chemotaxis transducer/Ntr-family protein); PFAM: Cache type 2 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain cont [...]


ensembl_gene_id: Deba_2126
symbol: Deba_2126
gene_biotype: protein_coding
description:
  HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: psa:PST_1581 restriction endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: Q1NP98 HNH endonuclease; PFAM: HNH endonuclease.


ensembl_gene_id: Deba_2127
symbol: Deba_2127
gene_biotype: protein_coding
description:
  COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: pvi:Cvib_0884 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: A4SEJ0 Alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold.


ensembl_gene_id: Deba_2128
symbol: Deba_2128
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gur:Gura_3066 cache type 2 domain-containing protein; SPTR: A5G619 Cache, type 2 domain protein.


ensembl_gene_id: Deba_2129
symbol: Deba_2129
gene_biotype: protein_coding
description:
  HesB/YadR/YfhF-family protein; InterPro IPR000361; KEGG: dal:Dalk_4032 hypothetical protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: B8FLY4 Putative uncharacterized protein; PFAM: Iron-sulphur cluster biosynthesis.


ensembl_gene_id: Deba_2131
symbol: Deba_2131
gene_biotype: protein_coding
description:
  COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; InterPro IPR003813; KEGG: sfu:Sfum_2154 methyl-viologen-reducing hydrogenase, delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit; SPTR: A0LK84 Methyl-viologen-reducing hydrogenase, delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.


ensembl_gene_id: Deba_2132
symbol: Deba_2132
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterProIPR016040:IPR017896:IPR017900:IPR001450:IPR 006076; KEGG: dal:Dalk_0247 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: FAD dependent oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FMT9 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; FAD dependent oxidoreductase.


ensembl_gene_id: Deba_2133
symbol: Deba_2133
gene_biotype: protein_coding
description:
  COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; InterPro IPR003813; KEGG: dal:Dalk_3063 methyl-viologen-reducing hydrogenase delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit; SPTR: B8FBK0 Methyl-viologen-reducing hydrogenase delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.


ensembl_gene_id: Deba_2134
symbol: Deba_2134
gene_biotype: protein_coding
description:
  InterPro IPR009051:IPR017896:IPR017900; KEGG: dal:Dalk_5062 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FDV2 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.


ensembl_gene_id: Deba_2135
symbol: Deba_2135
gene_biotype: protein_coding
description:
  InterPro IPR009051:IPR017896:IPR017900; KEGG: sfu:Sfum_1971 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: A0LJQ3 4Fe-4S ferredoxin, iron-sulfur binding domain protein.


ensembl_gene_id: Deba_2136
symbol: Deba_2136
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017938:IPR001834:IPR017927:IPR012165:IPR 008333:IPR001433:IPR019480; KEGG: sfu:Sfum_1970 oxidoreductase FAD/NAD(P)-binding subunit; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: A0LJQ2 Oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Ox [...]


ensembl_gene_id: Deba_2137
symbol: Deba_2137
gene_biotype: protein_coding
description:
  Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR009051:IPR012285:IPR017896:IPR017900:IPR 017969:IPR004017; KEGG: sfu:Sfum_2146 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A0LK76 Putative uncharacterized protein; PFAM: Cysteine-rich domain.


ensembl_gene_id: Deba_2138
symbol: Deba_2138
gene_biotype: protein_coding
description:
  COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: dau:Daud_1208 magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: B1I3V1 Magnesium chelatase.


ensembl_gene_id: Deba_2139
symbol: Deba_2139
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296:IPR001173; KEGG: kpu:KP1_0662 hypothetical protein; PFAM: glycosyl transferase family 2; glycosyl transferase group 1; SPTR: C4X2L8 Putative uncharacterized protein; manually curated; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.


ensembl_gene_id: Deba_2140
symbol: Deba_2140
gene_biotype: protein_coding
description:
  NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR008089:IPR002198:IPR001509; KEGG: sfu:Sfum_2190 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C0GQ58 NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Deba_2141
symbol: Deba_2141
gene_biotype: protein_coding
description:
  Malic protein NAD-binding protein; COGs: COG0281 Malic enzyme; InterProIPR016040:IPR015884:IPR012188:IPR012301:IPR 012302:IPR002505; KEGG: glo:Glov_1262 malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; SPTR: B3E7A4 Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase; PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase.


ensembl_gene_id: Deba_2144
symbol: Deba_2144
gene_biotype: protein_coding
description:
  COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438:IPR011762:IPR011763:IPR000022; KEGG: gsu:GSU2370 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase; SPTR: Q74AI4 Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit.


ensembl_gene_id: Deba_2145
symbol: Deba_2145
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; InterPro IPR009875; KEGG: sth:STH863 hypothetical protein; PFAM: type IV pilus assembly PilZ; SPTR: Q67R45 Putative uncharacterized protein; PFAM: PilZ domain.


ensembl_gene_id: Deba_2147
symbol: Deba_2147
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family; InterPro IPR016032:IPR000792:IPR011991; KEGG: sfu:Sfum_0947 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: A0LGU1 Two component transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.


ensembl_gene_id: Deba_2148
symbol: Deba_2148
gene_biotype: protein_coding
description:
  InterPro IPR009875; KEGG: sfu:Sfum_3881 type IV pilus assembly PilZ; PFAM: type IV pilus assembly PilZ; SPTR: A0LQ48 Type IV pilus assembly PilZ; PFAM: PilZ domain.


ensembl_gene_id: Deba_2149
symbol: Deba_2149
gene_biotype: protein_coding
description:
  COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: dal:Dalk_3267 methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; SPTR: B8FJ30 Methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Deba_2150
symbol: Deba_2150
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterProIPR013027:IPR000103:IPR016040:IPR017896:IPR 017900:IPR003953:IPR001450:IPR006076; KEGG: sfu:Sfum_3133 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LN04 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: FAD binding domain; 4Fe-4S binding domain; FAD dependent oxidoreductase.


ensembl_gene_id: Deba_2151
symbol: Deba_2151
gene_biotype: protein_coding
description:
  COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; InterPro IPR003813; KEGG: mta:Moth_1193 methyl-viologen-reducing hydrogenase, delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit; SPTR: Q2RJ82 Methyl-viologen-reducing hydrogenase, delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.


ensembl_gene_id: Deba_2152
symbol: Deba_2152
gene_biotype: protein_coding
description:
  KEGG: dal:Dalk_3264 hypothetical protein; SPTR: B8FJ27 Putative uncharacterized protein; PFAM: Methylene-tetrahydrofolate reductase C terminal.


ensembl_gene_id: Deba_2153
symbol: Deba_2153
gene_biotype: protein_coding
description:
  COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: dal:Dalk_2779 methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; SPTR: B8FKU9 Methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Deba_2154
symbol: Deba_2154
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: dal:Dalk_3262 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FJ25 Response regulator receiver protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_2155
symbol: Deba_2155
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ach:Achl_0449 alpha/beta hydrolase fold-3 domain protein; SPTR: B8HAI7 Alpha/beta hydrolase fold-3 domain protein.


ensembl_gene_id: Deba_2156
symbol: Deba_2156
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mex:Mext_1994 beta-lactamase domain-containing protein; SPTR: A9W487 Beta-lactamase domain protein.


ensembl_gene_id: Deba_2157
symbol: Deba_2157
gene_biotype: protein_coding
description:
  COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003594:IPR009082:IPR004358:IPR005467:IPR 000014:IPR000700:IPR001610:IPR003661:IPR013656:IPR013767; KEGG: sfu:Sfum_2807 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A0LM33 Sensor protein; TI [...]


ensembl_gene_id: Deba_2158
symbol: Deba_2158
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR011006:IPR009082:IPR004358:IPR 005467:IPR001789:IPR000014:IPR003661:IPR013656; KEGG: dal:Dalk_2419 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein; SPTR: B8FB26 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Response regulator rec [...]


ensembl_gene_id: Deba_2159
symbol: Deba_2159
gene_biotype: protein_coding
description:
  Transketolase domain protein; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: sus:Acid_0656 transketolase domain-containing protein; PFAM: Transketolase domain protein; SPTR: Q02BA9 Transketolase domain protein; PFAM: Transketolase, thiamine diphosphate binding domain.


ensembl_gene_id: Deba_2160
symbol: Deba_2160
gene_biotype: protein_coding
description:
  Transketolase central region; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR009014:IPR005475; KEGG: sus:Acid_0657 transketolase, central region; PFAM: Transketolase central region; SPTR: Q02BA8 Transketolase, central region; manually curated; PFAM: Transketolase, pyrimidine binding domain.


ensembl_gene_id: Deba_2162
symbol: Deba_2162
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sus:Acid_0658 NAD-dependent epimerase/dehydratase; PFAM: glycosyl transferase family 2; SPTR: Q02BA7 NAD-dependent epimerase/dehydratase; manually curated; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_2163
symbol: Deba_2163
gene_biotype: protein_coding
description:
  Methyltransferase type 12; InterPro IPR013217; KEGG: sus:Acid_0659 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Q02BA6 Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_2164
symbol: Deba_2164
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: ppd:Ppro_0039 ArsR family transcriptional regulator; PFAM: Methyltransferase type 11; SPTR: B0VEV0 Putative 3-demethylubiquinone-9 3-O-methyltransferase; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_2165
symbol: Deba_2165
gene_biotype: protein_coding
description:
  Methyltransferase type 12; InterPro IPR013217; KEGG: dma:DMR_45250 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: C4XRV0 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_2167
symbol: Deba_2167
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rru:Rru_B0007 glycosyl transferase, group 1; SPTR: Q2RMP2 Glycosyl transferase, group 1.


ensembl_gene_id: Deba_2169
symbol: Deba_2169
gene_biotype: protein_coding
description:
  Methyltransferase type 12; InterPro IPR013217; KEGG: cts:Ctha_1954 RNA methyltransferase, TrmA family; PFAM: Methyltransferase type 12; SPTR: A0Y156 Membrane-associated protein.


ensembl_gene_id: Deba_2170
symbol: Deba_2170
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nar:Saro_0601 sulfotransferase; SPTR: Q2GAS5 Sulfotransferase; PFAM: Sulfotransferase domain.


ensembl_gene_id: Deba_2171
symbol: Deba_2171
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015421:IPR015422:IPR000653; KEGG: gme:Gmet_2332 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Q39T67 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Deba_2173
symbol: Deba_2173
gene_biotype: protein_coding
description:
  WbqC-like family protein; InterPro IPR014985; KEGG: psb:Psyr_1578 hypothetical protein; PFAM: WbqC-like family protein; SPTR: Q4ZW46 Putative uncharacterized protein; PFAM: WbqC-like protein family.


ensembl_gene_id: Deba_2174
symbol: Deba_2174
gene_biotype: protein_coding
description:
  Nitrogen-fixing NifU domain protein; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871; KEGG: pth:PTH_0581 NifU-like protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: A5D4Q3 NifU homolog; PFAM: NifU-like N terminal domain.


ensembl_gene_id: Deba_2175
symbol: Deba_2175
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR017900:IPR002586:IPR001450; KEGG: sfu:Sfum_3408 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LNS9 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_2176
symbol: Deba_2176
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR017900:IPR002586:IPR001450; KEGG: sfu:Sfum_3409 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LNT0 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S binding domain.


ensembl_gene_id: Deba_2177
symbol: Deba_2177
gene_biotype: protein_coding
description:
  COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: dds:Ddes_1867 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Q5DUA6 Putative uncharacterized protein orp (Fragment); PFAM: Dinitrogenase iron-molybdenum cofactor.


ensembl_gene_id: Deba_2179
symbol: Deba_2179
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR009057:IPR020441:IPR002078:IPR000014:IPR 000700:IPR001610:IPR003593:IPR013656:IPR002197; KEGG: sfu:Sfum_3592 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; PAC repeat-containing protein; SPTR: A0LPB0 Sigma54 specific transcriptional regulator, Fis fam [...]


ensembl_gene_id: Deba_2180
symbol: Deba_2180
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; InterProIPR009057:IPR011075:IPR001647:IPR012287:IPR 015292; KEGG: mca:MCA1598 TetR family transcriptional regulator; PFAM: regulatory protein TetR; Transcriptional regulator TetR; SPTR: Q607Z9 Transcriptional regulator, TetR family; PFAM: Domain of unknown function (DUF1956); Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Deba_2181
symbol: Deba_2181
gene_biotype: protein_coding
description:
  COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: dal:Dalk_1443 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; SPTR: B8FA47 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.


ensembl_gene_id: Deba_2182
symbol: Deba_2182
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dal:Dalk_1444 efflux transporter, RND family, MFP subunit; SPTR: B8FA48 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Deba_2183
symbol: Deba_2183
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR000209; KEGG: dal:Dalk_1445 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: B8FA49 Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Deba_2185
symbol: Deba_2185
gene_biotype: protein_coding
description:
  UvrD/REP helicase; COGs: COG1379 conserved hypothetical protein; InterPro IPR014016:IPR014017:IPR000212; KEGG: rmr:Rmar_0317 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: D0MDM9 UvrD/REP helicase; PFAM: UvrD/REP helicase; TIGRFAM: conserved hypothetical protein TIGR00375.


ensembl_gene_id: Deba_2187
symbol: Deba_2187
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR011006:IPR009057:IPR020441:IPR002078:IPR 001789:IPR003593:IPR002197; KEGG: adg:Adeg_0173 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: C6PBI3 Two component, sigma54 specific, transcriptional regulator, Fis fa [...]


ensembl_gene_id: Deba_2188
symbol: Deba_2188
gene_biotype: protein_coding
description:
  Cell shape determining protein MreB/Mrl; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: ctc:CTC02074 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: Q892M2 Rod shape-determining protein mreB; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.


ensembl_gene_id: Deba_2189
symbol: Deba_2189
gene_biotype: protein_coding
description:
  Peptidase S16 lon domain protein; COGs: COG1067 ATP-dependent protease; InterPro IPR020568:IPR001984; KEGG: adg:Adeg_0177 peptidase S16 lon domain protein; SPTR: C9RAS2 Peptidase S16 lon domain protein; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease.


ensembl_gene_id: Deba_2190
symbol: Deba_2190
gene_biotype: protein_coding
description:
  Response regulator receiver protein; InterPro IPR011006:IPR001789; KEGG: ank:AnaeK_3251 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: response regulator receiver; SPTR: B4UM36 Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain.


ensembl_gene_id: Deba_2191
symbol: Deba_2191
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nfa:nfa12370 putative indolepyruvate ferredoxin oxidoreductase alpha subunit.


ensembl_gene_id: Deba_2192
symbol: Deba_2192
gene_biotype: protein_coding
description:
  Aconitate hydratase; COGs: COG1048 Aconitase A; InterProIPR001030:IPR015928:IPR015931:IPR015932:IPR 000573:IPR006250; KEGG: glo:Glov_1612 aconitate hydratase; PFAM: aconitate hydratase domain protein; SPTR: Q1NKB5 Putative aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type.


ensembl_gene_id: Deba_2193
symbol: Deba_2193
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR011990:IPR001173; KEGG: ade:Adeh_1337 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Q2IQM7 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Deba_2194
symbol: mqnE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: Deba_2195
symbol: mqnC
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Deba_2196
symbol: Deba_2196
gene_biotype: protein_coding
description:
  Amidohydrolase; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: dma:DMR_02310 amidohydrolase family protein; PFAM: amidohydrolase; SPTR: C4XGE2 Amidohydrolase family protein; PFAM: Amidohydrolase family.


ensembl_gene_id: Deba_2197
symbol: Deba_2197
gene_biotype: protein_coding
description:
  KEGG: afw:Anae109_1228 hypothetical protein; SPTR: B5RV92 Putative cobalamin biosynthesis cobd transmembrane protein.


ensembl_gene_id: Deba_2198
symbol: Deba_2198
gene_biotype: protein_coding
description:
  COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR016156:IPR013027:IPR000815:IPR004099:IPR 012999:IPR006258; KEGG: dsa:Desal_3027 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: C6C0Y2 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase.


ensembl_gene_id: Deba_2199
symbol: Deba_2199
gene_biotype: protein_coding
description:
  KEGG: dal:Dalk_4372 beta-lactamase domain protein; SPTR: B8FN82 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Deba_2200
symbol: Deba_2200
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR016156:IPR001763:IPR013027:IPR004099; KEGG: dps:DP0550 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; SPTR: Q6AQU4 Related to NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain.


ensembl_gene_id: Deba_2201
symbol: Deba_2201
gene_biotype: protein_coding
description:
  Hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR018228:IPR012278:IPR001130:IPR015991; KEGG: pca:Pcar_1695 Mg-dependent DNase; PFAM: TatD-related deoxyribonuclease; SPTR: Q3A3W9 Mg-dependent DNase; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.


ensembl_gene_id: Deba_2202
symbol: Deba_2202
gene_biotype: protein_coding
description:
  Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Deba_2203
symbol: Deba_2203
gene_biotype: protein_coding
description:
  Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Deba_2204
symbol: Deba_2204
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: azc:AZC_1518 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: A8HXM4 Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Deba_2205
symbol: Deba_2205
gene_biotype: protein_coding
description:
  KEGG: deb:DehaBAV1_0492 hypothetical protein; SPTR: A5FRU6 Putative uncharacterized protein; PFAM: Cobalamin-independent synthase, Catalytic domain.


ensembl_gene_id: Deba_2206
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: Deba_2207
symbol: Deba_2207
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR011990:IPR013026:IPR019734; KEGG: cvi:CV_0900 hypothetical protein; SPTR: Q7NZM2 Putative uncharacterized protein.


ensembl_gene_id: Deba_2208
symbol: Deba_2208
gene_biotype: protein_coding
description:
  Septum formation initiator; InterPro IPR007060; KEGG: mxa:MXAN_3704 cell division protein FtsB; PFAM: Septum formation initiator; SPTR: Q08NE1 Septum formation initiator subfamily; PFAM: Septum formation initiator.


ensembl_gene_id: Deba_2209
symbol: Deba_2209
gene_biotype: protein_coding
description:
  Geranylgeranyl reductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042:IPR006076:IPR011777; KEGG: mta:Moth_0808 geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; SPTR: Q2RKB3 Geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; TIGRFAM: geranylgeranyl reductase family.


ensembl_gene_id: Deba_2210
symbol: Deba_2210
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197; KEGG: sfu:Sfum_1766 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A0LJ51 Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_2213
symbol: Deba_2213
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 1; COGs: COG0546 phosphatase; InterPro IPR005833:IPR005834:IPR006439; KEGG: dal:Dalk_3700 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: B8FLN4 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif [...]


ensembl_gene_id: Deba_2215
symbol: Deba_2215
gene_biotype: protein_coding
description:
  COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: drt:Dret_0273 molybdopterin oxidoreductase, transmembrane subunit, putative; PFAM: Polysulphide reductase NrfD; SPTR: C8WZV0 Molybdopterin oxidoreductase, transmembrane subunit; PFAM: Polysulphide reductase, NrfD.


ensembl_gene_id: Deba_2216
symbol: Deba_2216
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896:IPR017900:IPR001450; KEGG: dol:Dole_2548 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ZWM1 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Deba_2217
symbol: Deba_2217
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR009010:IPR000169:IPR006656:IPR006657; KEGG: dal:Dalk_1268 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: B8F9M5 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Deba_2218
symbol: Deba_2218
gene_biotype: protein_coding
description:
  InterPro IPR011031; KEGG: dol:Dole_2546 hypothetical protein; SPTR: A8ZWL9 Putative uncharacterized protein; PFAM: Class III cytochrome C family.


ensembl_gene_id: Deba_2219
symbol: Deba_2219
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR020476:IPR000086:IPR020084; KEGG: aca:ACP_2902 hydrolase, NUDIX family; PFAM: NUDIX hydrolase; SPTR: C1F3W2 Hydrolase, NUDIX family; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Deba_2221
symbol: Deba_2221
gene_biotype: protein_coding
description:
  InterPro IPR011051:IPR013096; KEGG: dal:Dalk_3657 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: B8FGW5 Cupin 2 conserved barrel domain protein; PFAM: Cupin domain.


ensembl_gene_id: Deba_2222
symbol: Deba_2222
gene_biotype: protein_coding
description:
  KEGG: fre:Franean1_5789 hypothetical protein; SPTR: A8L8L9 Putative uncharacterized protein; PFAM: RNA cap guanine-N2 methyltransferase.


ensembl_gene_id: Deba_2224
symbol: Deba_2224
gene_biotype: protein_coding
description:
  COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: dol:Dole_0458 methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; SPTR: A8ZTK4 Methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Deba_2225
symbol: Deba_2225
gene_biotype: protein_coding
description:
  KEGG: dat:HRM2_30870 putative zinc-finger protein; SPTR: C0QKT0 Putative zinc-finger protein; PFAM: Methylene-tetrahydrofolate reductase C terminal.


ensembl_gene_id: Deba_2226
symbol: Deba_2226
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR009051:IPR000759:IPR016040:IPR017896:IPR 017900:IPR001450:IPR013027:IPR003953; KEGG: dal:Dalk_3266 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: B8FJ29 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Pyridine nucle [...]


ensembl_gene_id: Deba_2227
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR020628:IPR000559; KEGG: dat:HRM2_16700 Fhs; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: C0QAX9 Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase.


ensembl_gene_id: Deba_2228
symbol: rnfB-2
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: Deba_2230
symbol: Deba_2230
gene_biotype: protein_coding
description:
  COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: ank:AnaeK_3493 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: B4UBN2 Class I peptide chain release factor; PFAM: RF-1 domain.


ensembl_gene_id: Deba_2231
symbol: Deba_2231
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: dal:Dalk_1135 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: B8F992 Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Deba_2232
symbol: Deba_2232
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR017900:IPR001450; KEGG: dal:Dalk_0385 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FH06 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Deba_2233
symbol: Deba_2233
gene_biotype: protein_coding
description:
  Anti-sigma-factor antagonist; InterPro IPR002645; KEGG: hmo:HM1_0319 anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Q1NPE5 Sulfate transporter/antisigma-factor antagonist STAS; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.


ensembl_gene_id: Deba_2234
symbol: Deba_2234
gene_biotype: protein_coding
description:
  Ketose-bisphosphate aldolase class-II; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR013785:IPR000771; KEGG: gur:Gura_3299 fructose/tagatose bisphosphate aldolase-like protein; PFAM: ketose-bisphosphate aldolase class-II; SPTR: A5G6N8 Fructose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II.


ensembl_gene_id: Deba_2235
symbol: Deba_2235
gene_biotype: protein_coding
description:
  periplasmic/7TM domain sensor diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR011622:IPR011623; KEGG: saz:Sama_2871 response regulator; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; SPTR: A1S9L7 Response regulator containing a CheY-like receiver domain and a GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: 7TM diverse intracellular signalling; GG [...]


ensembl_gene_id: Deba_2236
symbol: Deba_2236
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR010998:IPR013762:IPR002104; KEGG: adg:Adeg_0419 integrase family protein; PFAM: integrase family protein; SPTR: A8UWI5 Phage integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Deba_2237
symbol: Deba_2237
gene_biotype: protein_coding
description:
  Phage portal protein, HK97 family; COGs: COG4695 Phage-related protein; InterPro IPR006944:IPR006427; KEGG: hmo:HM1_2882 phage portal protein, hk97 family; PFAM: portal protein; SPTR: B0N9U4 Putative uncharacterized protein; TIGRFAM: phage portal protein, HK97 family; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.


ensembl_gene_id: Deba_2238
symbol: Deba_2238
gene_biotype: protein_coding
description:
  InterPro IPR006433:IPR006444; KEGG: cth:Cthe_2866 phage major capsid protein, HK97; PFAM: peptidase U35 phage prohead HK97; major capsid protein HK97; SPTR: B4BHH3 Major capsid protein HK97; TIGRFAM: phage major capsid protein, HK97 family; PFAM: Phage capsid family; Caudovirus prohead protease; TIGRFAM: phage major capsid protein, HK97 family; phage prohead protease, HK97 family.


ensembl_gene_id: Deba_2240
symbol: Deba_2240
gene_biotype: protein_coding
description:
  HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: dvu:DVU1505 holin, putative; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C5RJY1 HNH endonuclease; manually curated; PFAM: HNH endonuclease.


ensembl_gene_id: Deba_2241
symbol: Deba_2241
gene_biotype: protein_coding
description:
  Bifunctional DNA primase/polymerase; InterPro IPR015330; KEGG: apt:APA01_26890 DNA recombinase RecA; PFAM: Bifunctional DNA primase/polymerase; SPTR: C6N3S3 Putative truncated Phage / plasmid primase P4; PFAM: Bifunctional DNA primase/polymerase, N-terminal.


ensembl_gene_id: Deba_2243
symbol: Deba_2243
gene_biotype: protein_coding
description:
  DNA binding domain protein, excisionase family; InterPro IPR009061:IPR010093; KEGG: lin:lin0082 hypothetical protein; SPTR: A8ASM8 Gp39; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Deba_2244
symbol: Deba_2244
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR009061; KEGG: oca:OCAR_7446 phage transcriptional regulator, AlpA; SPTR: A3ES91 Putative uncharacterized protein.


ensembl_gene_id: Deba_2247
symbol: Deba_2247
gene_biotype: protein_coding
description:
  KEGG: tde:TDE2009 hypothetical protein; SPTR: C1SMG9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1329).


ensembl_gene_id: Deba_2248
symbol: Deba_2248
gene_biotype: protein_coding
description:
  COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dde:Dde_1600 receptor precursor-mostly Fe transport; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Q311J9 Receptor-mostly Fe transport; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.


ensembl_gene_id: Deba_2249
symbol: Deba_2249
gene_biotype: protein_coding
description:
  MMPL domain protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731:IPR004869; KEGG: dol:Dole_0610 exporter of the RND superfamily protein-like protein; PFAM: MMPL domain protein; SPTR: B6WQE3 Putative uncharacterized protein; PFAM: MMPL family.


ensembl_gene_id: Deba_2251
symbol: Deba_2251
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gdj:Gdia_1815 glycosyl transferase family 2; SPTR: A9HGV1 Putative glycosyl transferase.


ensembl_gene_id: Deba_2252
symbol: Deba_2252
gene_biotype: protein_coding
description:
  COGs: COG3551 conserved hypothetical protein; KEGG: swi:Swit_4000 hypothetical protein; SPTR: A8TT37 Glycosyl transferase, group 2 family protein; manually curated.


ensembl_gene_id: Deba_2253
symbol: Deba_2253
gene_biotype: protein_coding
description:
  Putative cache sensor protein; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR013163; KEGG: dvl:Dvul_2639 methyl-accepting chemotaxis sensory transducer; PFAM: Cache type 2 domain protein; SPTR: Q72F70 Methyl-accepting chemotaxis protein; PFAM: Cache domain.


ensembl_gene_id: Deba_2254
symbol: Deba_2254
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR011006:IPR009082:IPR004358:IPR 005467:IPR001789:IPR000014:IPR000700:IPR001610:IPR003661:I PR013656:IPR013767; KEGG: dol:Dole_3265 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C0GU [...]


ensembl_gene_id: Deba_2255
symbol: Deba_2255
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR011006:IPR009082:IPR004358:IPR 005467:IPR001789:IPR000700:IPR003660:IPR001610:IPR003661:I PR013767:IPR000014; KEGG: dal:Dalk_3402 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAC repeat-containing protein; response  [...]


ensembl_gene_id: Deba_2258
symbol: Deba_2258
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000700:IPR001633:IPR000160:IPR 000215:IPR018313:IPR001610:IPR013767:IPR013656; KEGG: mei:Msip34_2729 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: C6XBJ6 Di [...]


ensembl_gene_id: Deba_2259
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: Deba_2261
symbol: Deba_2261
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; InterPro IPR009082:IPR000014:IPR000700:IPR013656; KEGG: dal:Dalk_2075 PAS/PAC sensor hybrid histidine kinase; PFAM: PAS fold-4 domain protein; SPTR: B8FG89 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Deba_2262
symbol: Deba_2262
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: similar to epsin 2a; K12471 epsin; SPTR: B7X1T9 Gp37Gp68 family protein.


ensembl_gene_id: Deba_2264
symbol: Deba_2264
gene_biotype: protein_coding
description:
  COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR013785:IPR004136; KEGG: dol:Dole_1182 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: A8ZXN0 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane dioxygenase.


ensembl_gene_id: Deba_2265
symbol: Deba_2265
gene_biotype: protein_coding
description:
  COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR016196:IPR003594:IPR011701; KEGG: bbe:BBR47_11350 hypothetical protein; PFAM: major facilitator superfamily MFS_1; ATP-binding region ATPase domain protein; SPTR: C0Z6F5 Conserved hypothetical membrane protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Major Facilitator Superfamily.


ensembl_gene_id: Deba_2266
symbol: Deba_2266
gene_biotype: protein_coding
description:
  Redox-active disulfide protein 2; InterPro IPR012336:IPR012335:IPR005243; KEGG: dol:Dole_2878 redox-active disulfide protein 2; SPTR: A8ZYF6 Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2.


ensembl_gene_id: Deba_2267
symbol: Deba_2267
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; InterPro IPR012336:IPR012335; KEGG: sfu:Sfum_3389 hypothetical protein; SPTR: A0LNR0 Putative uncharacterized protein.


ensembl_gene_id: Deba_2268
symbol: Deba_2268
gene_biotype: protein_coding
description:
  Permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: dat:HRM2_48210 putative permease; PFAM: permease; SPTR: C0QIC5 Putative permease; PFAM: Predicted permease.


ensembl_gene_id: Deba_2269
symbol: Deba_2269
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; InterPro IPR001845:IPR011991; KEGG: ank:AnaeK_4017 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q1K378 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.


ensembl_gene_id: Deba_2270
symbol: Deba_2270
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: dal:Dalk_3679 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8FLL3 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.


ensembl_gene_id: Deba_2271
symbol: Deba_2271
gene_biotype: protein_coding
description:
  Permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: dal:Dalk_3678 permease; PFAM: permease; SPTR: B8FLL2 Permease; PFAM: Predicted permease.


ensembl_gene_id: Deba_2272
symbol: Deba_2272
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR001589; KEGG: bcm:Bcenmc03_6922 hypothetical protein; SPTR: C9YBS0 Putative uncharacterized protein.


ensembl_gene_id: Deba_2273
symbol: Deba_2273
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR011051; KEGG: tye:THEYE_A0935 hypothetical protein; SPTR: B5YKK6 Putative uncharacterized protein; PFAM: Cupin domain.


ensembl_gene_id: Deba_2274
symbol: Deba_2274
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1791; COGs: COG1416 conserved hypothetical protein; InterPro IPR014865; KEGG: pis:Pisl_0130 hypothetical protein; PFAM: Domain of unknown function DUF1791; SPTR: A1RQT1 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family.


ensembl_gene_id: Deba_2275
symbol: Deba_2275
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: tye:THEYE_A1314 AstB/ChuR-related protein; PFAM: Radical SAM domain protein; SPTR: B5YFS6 AstB/chuR-related protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Deba_2278
symbol: Deba_2278
gene_biotype: protein_coding
description:
  COGs: COG0681 Signal peptidase I; InterProIPR015927:IPR000223:IPR011056:IPR019756:IPR 019757:IPR019758:IPR019759; KEGG: dvm:DvMF_2718 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: B8DIZ6 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.


ensembl_gene_id: Deba_2280
symbol: Deba_2280
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ctc:CTC00227 putative cell wall-associated hydrolase; SPTR: Q899F4 Putative cell wall-associated hydrolase.


ensembl_gene_id: Deba_2281
symbol: Deba_2281
gene_biotype: protein_coding
description:
  Ferredoxin; COGs: COG3894 Uncharacterized metal-binding protein; InterPro IPR001041:IPR012675; KEGG: dat:HRM2_30730 Fdx8; PFAM: ferredoxin; SPTR: C0QKR6 Fdx8; PFAM: 2Fe-2S iron-sulfur cluster binding domain.


ensembl_gene_id: Deba_2282
symbol: Deba_2282
gene_biotype: protein_coding
description:
  Membrane protein of unknown function; COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: pca:Pcar_2963 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: C0GQV8 Putative uncharacterized protein; PFAM: Membrane protein of unknown function.


ensembl_gene_id: Deba_2284
symbol: Deba_2284
gene_biotype: protein_coding
description:
  InterPro IPR013429; KEGG: dal:Dalk_1639 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; SPTR: B8FAP1 Regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.


ensembl_gene_id: Deba_2285
symbol: Deba_2285
gene_biotype: protein_coding
description:
  COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR004808:IPR000097; KEGG: sfu:Sfum_2331 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: A0LKR0 Exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth).


ensembl_gene_id: Deba_2286
symbol: Deba_2286
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR003018; KEGG: amc:MADE_03704 GGDEF domain protein; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; SPTR: A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Deba_2288
symbol: Deba_2288
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR016040:IPR002198:IPR001509:IPR005888; KEGG: rpd:RPD_1571 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q13AT1 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: Deba_2289
symbol: Deba_2289
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: Deba_2290
symbol: Deba_2290
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: Deba_2291
symbol: Deba_2291
gene_biotype: protein_coding
description:
  COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR011051:IPR014710:IPR000888; KEGG: sat:SYN_00576 dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: Q2LVW0 DTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: WxcM-like, C-terminal.


ensembl_gene_id: Deba_2292
symbol: Deba_2292
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; InterPro IPR011990:IPR019734:IPR013026:IPR001440; KEGG: pca:Pcar_0844 hypothetical protein; PFAM: TPR repeat-containing protein; SPTR: Q3A6A7 Putative uncharacterized protein.


ensembl_gene_id: Deba_2293
symbol: Deba_2293
gene_biotype: protein_coding
description:
  TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: Deba_2294
symbol: Deba_2294
gene_biotype: protein_coding
description:
  COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: dal:Dalk_3527 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: B8FC10 Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR.


ensembl_gene_id: Deba_2295
symbol: Deba_2295
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: pca:Pcar_0847 biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q3A6A4 Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.


ensembl_gene_id: Deba_2296
symbol: Deba_2296
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR017270:IPR002898; KEGG: pca:Pcar_0848 TolR-like transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q3A6A3 TolR-like transport protein; PFAM: Protein of unknown function (DUF3450); MotA/TolQ/ExbB proton channel family.


ensembl_gene_id: Deba_2297
symbol: Deba_2297
gene_biotype: protein_coding
description:
  KEGG: pca:Pcar_0849 hypothetical protein; SPTR: Q3A6A2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3450).


ensembl_gene_id: Deba_2298
symbol: Deba_2298
gene_biotype: protein_coding
description:
  Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Deba_2299
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: Deba_2300
symbol: Deba_2300
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: gem:GM21_3730 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: C6E6X1 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: AIR carboxylase.


ensembl_gene_id: Deba_2301
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Deba_2302
symbol: Deba_2302
gene_biotype: protein_coding
description:
  KEGG: ank:AnaeK_3685 hypothetical protein; SPTR: B4UD99 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1285).


ensembl_gene_id: Deba_2303
symbol: Deba_2303
gene_biotype: protein_coding
description:
  Putative methyl-accepting chemotaxis sensory transducer; InterPro IPR003660; KEGG: dal:Dalk_2462 protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: B8FF95 Protein serine/threonine phosphatase; PFAM: HAMP domain.


ensembl_gene_id: Deba_2304
symbol: Deba_2304
gene_biotype: protein_coding
description:
  Na/Pi-cotransporter II-related protein; COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841:IPR008170:IPR004633; KEGG: pca:Pcar_2560 Na+/phosphate symporter; PFAM: Na+/Picotransporter; PhoU family protein; SPTR: Q3A1F9 Na+/phosphate symporter; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Pi-cotransporter; PhoU domain; TIGRFAM: Na/Pi-cotransporter.


ensembl_gene_id: Deba_2305
symbol: Deba_2305
gene_biotype: protein_coding
description:
  COGs: COG3144 Flagellar hook-length control protein; InterPro IPR001635; KEGG: dma:DMR_13730 putative flagellar hook-length control protein; PFAM: flagellar hook-length control protein; SPTR: C4XMS3 Putative flagellar hook-length control protein; PFAM: Flagellar hook-length control protein FliK.


ensembl_gene_id: Deba_2306
symbol: Deba_2306
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Deba_2307
symbol: Deba_2307
gene_biotype: protein_coding
description:
  Fagellar hook-basal body protein; COGs: COG1749 Flagellar hook protein FlgE; InterProIPR002371:IPR019776:IPR001444:IPR011491:IPR 010930:IPR020013; KEGG: dal:Dalk_1015 protein of unknown function DUF1078 domain protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body FlaE domain protein; SPTR: C8QYQ3 Putative uncharacterized protein; TIGRFAM: fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Deba_2308
symbol: Deba_2308
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB proton channel; COGs: COG1291 Flagellar motor component; InterPro IPR002898; KEGG: dsa:Desal_3811 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q1JZT0 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family.


ensembl_gene_id: Deba_2309
symbol: Deba_2309
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: nmu:Nmul_A1315 flagellar motor protein MotD; PFAM: OmpA/MotB domain protein; SPTR: Q2Y9F3 OmpA/MotB; PFAM: OmpA family.


ensembl_gene_id: Deba_2310
symbol: Deba_2310
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: tai:Taci_1325 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: D1B6B5 OmpA/MotB domain protein; PFAM: OmpA family.


ensembl_gene_id: Deba_2311
symbol: Deba_2311
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Deba_2312
symbol: Deba_2312
gene_biotype: protein_coding
description:
  COGs: COG1868 Flagellar motor switch protein; InterPro IPR001543:IPR001689; KEGG: dma:DMR_22580 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: C4XSQ7 Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.


ensembl_gene_id: Deba_2313
symbol: Deba_2313
gene_biotype: protein_coding
description:
  COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR001543:IPR001172:IPR012826; KEGG: dat:HRM2_37180 FliN; PFAM: surface presentation of antigens (SPOA) protein; SPTR: C0QAJ3 FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN.


ensembl_gene_id: Deba_2314
symbol: Deba_2314
gene_biotype: protein_coding
description:
  COGs: COG3190 Flagellar biogenesis protein; InterPro IPR007442; KEGG: lhk:LHK_02352 probable flagellar protein FliO; PFAM: flagellar biosynthesis protein FliO; SPTR: C1DAZ5 Probable flagellar protein FliO; TIGRFAM: flagellar biosynthetic protein FliO; PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO.


ensembl_gene_id: Deba_2315
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Deba_2316
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Deba_2317
symbol: Deba_2317
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Deba_2318
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Deba_2319
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Deba_2320
symbol: Deba_2320
gene_biotype: protein_coding
description:
  COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR003593:IPR000897:IPR020006; KEGG: glo:Glov_3285 GTP-binding signal recognition particle SRP54 G-domain; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: Q2B7H4 Flagellar biosynthesis regulator FlhF; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF.


ensembl_gene_id: Deba_2321
symbol: Deba_2321
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: sfu:Sfum_1383 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: Q1NP85 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Deba_2322
symbol: Deba_2322
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR013325:IPR013324:IPR000943:IPR011991:IPR 007627:IPR007624:IPR007630:IPR014284:IPR012845; KEGG: mgm:Mmc1_3037 FliA/WhiG family RNA polymerase sigma factor; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; SPTR: A0LC35 RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; S [...]


ensembl_gene_id: Deba_2323
symbol: Deba_2323
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: dvm:DvMF_2010 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8DQ89 Response regulator receiver protein; PFAM: Response regulator receiver domain.


