# geneInfo

ensembl_gene_id: Sgly_2661
symbol: Sgly_2661
gene_biotype: protein_coding
description:
  YcfA family protein; InterPro IPR012933; KEGG: swo:Swol_1661 hypothetical protein; PFAM: YcfA-like; SPTR: Putative uncharacterized protein; PFAM: YcfA-like protein.


ensembl_gene_id: Sgly_2662
symbol: Sgly_2662
gene_biotype: protein_coding
description:
  Integrase family protein; InterPro IPR002104; KEGG: shi:Shel_19160 site-specific recombinase XerD; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; PFAM: Phage integrase family.


ensembl_gene_id: Sgly_2663
symbol: Sgly_2663
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: dhd:Dhaf_1442 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_2664
symbol: Sgly_2664
gene_biotype: protein_coding
description:
  Protein of unknown function DUF891; COGs: COG4679 Phage-related protein; InterPro IPR009241; KEGG: dhd:Dhaf_1441 protein of unknown function DUF891; PFAM: Protein of unknown function DUF891; SPTR: Putative uncharacterized protein; PFAM: Phage derived protein Gp49-like (DUF891).


ensembl_gene_id: Sgly_2665
symbol: Sgly_2665
gene_biotype: protein_coding
description:
  KEGG: cth:Cthe_1655 hypothetical protein; SPTR: Cytosine-specific methyltransferase; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_2667
symbol: Sgly_2667
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pfh:PFHG_02356 conserved hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_2670
symbol: Sgly_2670
gene_biotype: protein_coding
description:
  COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836: IPR005904; KEGG: dhd:Dhaf_1437 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Hypoxanthine phosphoribosyl transferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Sgly_2672
symbol: Sgly_2672
gene_biotype: protein_coding
description:
  COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR003439; KEGG: drm:Dred_1485 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_2676
symbol: groL
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Sgly_2677
symbol: groS
gene_biotype: protein_coding
description:
  10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Sgly_2679
symbol: Sgly_2679
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: tal:Thal_1311 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Sgly_2680
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: Sgly_2681
symbol: Sgly_2681
gene_biotype: protein_coding
description:
  Glutaredoxin; InterPro IPR002109; KEGG: ttr:Tter_0505 glutaredoxin-like protein, YruB-family; PFAM: Glutaredoxin; SPTR: Glutaredoxin-like protein, YruB-family; PFAM: Glutaredoxin.


ensembl_gene_id: Sgly_2682
symbol: Sgly_2682
gene_biotype: protein_coding
description:
  degV family protein; COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: cob:COB47_1913 DegV family protein; PFAM: DegV; SPTR: DegV family protein; TIGRFAM: DegV; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family.


ensembl_gene_id: Sgly_2683
symbol: Sgly_2683
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: cbl:CLK_3078 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Sgly_2684
symbol: Sgly_2684
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_1404 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88.


ensembl_gene_id: Sgly_2685
symbol: Sgly_2685
gene_biotype: protein_coding
description:
  NAD-dependent formate dehydrogenase catalytic subunit; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR001041: IPR019574: IPR006963: IPR006656: IPR 006657: IPR006478; KEGG: dhd:Dhaf_1398 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molydopterin dinucleotide-binding domain; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreducta [...]


ensembl_gene_id: Sgly_2686
symbol: Sgly_2686
gene_biotype: protein_coding
description:
  NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538: IPR019554: IPR019575; KEGG: dsy:DSY3970 NADH dehydrogenase I chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase I chain F; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 K [...]


ensembl_gene_id: Sgly_2687
symbol: Sgly_2687
gene_biotype: protein_coding
description:
  COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: Fe-hydrogenase, gamma subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.


ensembl_gene_id: Sgly_2688
symbol: Sgly_2688
gene_biotype: protein_coding
description:
  COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: dhd:Dhaf_1395 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: Putative uncharacterized protein; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase.


ensembl_gene_id: Sgly_2689
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Sgly_2690
symbol: Sgly_2690
gene_biotype: protein_coding
description:
  COGs: COG0456 Acetyltransferase; InterPro IPR000182: IPR006464; KEGG: dhd:Dhaf_1392 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Ribosomal-protein-alanine N-acetyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase.


ensembl_gene_id: Sgly_2691
symbol: Sgly_2691
gene_biotype: protein_coding
description:
  Universal protein YeaZ; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: dhd:Dhaf_1391 peptidase M22 glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Putative uncharacterized protein; TIGRFAM: universal protein YeaZ; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ.


ensembl_gene_id: Sgly_2692
symbol: Sgly_2692
gene_biotype: protein_coding
description:
  Uncharacterized protein family UPF0079, ATPase; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: dhd:Dhaf_1390 protein of unknown function UPF0079; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family.


ensembl_gene_id: Sgly_2693
symbol: Sgly_2693
gene_biotype: protein_coding
description:
  Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: dsy:DSY3978 hypothetical protein; PFAM: Amidohydrolase 1; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase family.


ensembl_gene_id: Sgly_2695
symbol: Sgly_2695
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_1347 putative transcriptional regulator, CopG family; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_2696
symbol: Sgly_2696
gene_biotype: protein_coding
description:
  COGs: COG3442 glutamine amidotransferase; InterPro IPR011698; KEGG: dhd:Dhaf_1346 CobB/CobQ domain protein glutamine amidotransferase; PFAM: CobB/CobQ-like glutamine amidotransferase; SPTR: Putative uncharacterized protein; PFAM: CobB/CobQ-like glutamine amidotransferase domain.


ensembl_gene_id: Sgly_2697
symbol: Sgly_2697
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1727; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR013221: IPR013564; KEGG: dsy:DSY4019 hypothetical protein; PFAM: Domain of unknown function DUF1727; Mur ligase, central; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain.


ensembl_gene_id: Sgly_2698
symbol: Sgly_2698
gene_biotype: protein_coding
description:
  Transferase hexapeptide repeat containing protein; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: dsy:DSY4021 hypothetical protein; PFAM: Bacterial transferase hexapeptide repeat; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_2699
symbol: Sgly_2699
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR003607: IPR006674; KEGG: thx:Thet_1770 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Sgly_2700
symbol: Sgly_2700
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_4685 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325).


ensembl_gene_id: Sgly_2701
symbol: Sgly_2701
gene_biotype: protein_coding
description:
  Glutamate synthase (NADH) small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027: IPR006005; KEGG: dae:Dtox_3757 glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADH); SPTR: Glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit.


ensembl_gene_id: Sgly_2702
symbol: Sgly_2702
gene_biotype: protein_coding
description:
  Glutamate synthase (NADH) large subunit; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583: IPR006982: IPR002932: IPR002489; KEGG: dae:Dtox_3758 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.


ensembl_gene_id: Sgly_2703
symbol: Sgly_2703
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Sgly_2704
symbol: nnrE
gene_biotype: protein_coding
description:
  YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]


ensembl_gene_id: Sgly_2705
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: Sgly_2706
symbol: Sgly_2706
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524: IPR006037; KEGG: dhd:Dhaf_1338 transcriptional regulator, GntR family; PFAM: Regulator of K+ conductance, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, gntR family; TrkA-C domain.


ensembl_gene_id: Sgly_2707
symbol: Sgly_2707
gene_biotype: protein_coding
description:
  Glutamate 2,3-aminomutase; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197: IPR003739; KEGG: dhd:Dhaf_1337 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM; PRIAM: Lysine 2,3-aminomutase; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF160; PFAM: Lysine-2,3-aminomutase; TIGRFAM: KamA family protein.


ensembl_gene_id: Sgly_2708
symbol: Sgly_2708
gene_biotype: protein_coding
description:
  Conserved hypothetical protein CHP01212; COGs: COG1242 Fe-S oxidoreductase; InterPro IPR006638: IPR007197: IPR005911; KEGG: bha:BH3284 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: BH3284 protein; TIGRFAM: Conserved hypothetical protein CHP01212; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family.


ensembl_gene_id: Sgly_2709
symbol: Sgly_2709
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000014: IPR001610: IPR000160: IPR001633: IPR 013767; KEGG: tjr:TherJR_0997 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: Diguanylate cyclase [...]


ensembl_gene_id: Sgly_2710
symbol: Sgly_2710
gene_biotype: protein_coding
description:
  Ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: drm:Dred_2862 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; (TC 1.A.11.


ensembl_gene_id: Sgly_2711
symbol: Sgly_2711
gene_biotype: protein_coding
description:
  AMMECR1 domain protein; COGs: COG2078 conserved hypothetical protein; InterPro IPR004183: IPR002733; KEGG: dsy:DSY1550 hypothetical protein; PFAM: AMMECR1; Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; SPTR: Putative uncharacterized protein; TIGRFAM: AMMECR1; PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family.


ensembl_gene_id: Sgly_2712
symbol: Sgly_2712
gene_biotype: protein_coding
description:
  COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: tit:Thit_1275 glutamine synthetase catalytic region; PFAM: Glutamine synthetase, catalytic domain; SPTR: Glutamine synthetase catalytic region; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal.


ensembl_gene_id: Sgly_2714
symbol: Sgly_2714
gene_biotype: protein_coding
description:
  UPF0316 protein; COGs: COG4843 conserved hypothetical protein; HAMAP: UPF0316 protein; InterPro IPR019264; KEGG: dhd:Dhaf_3052 hypothetical protein; PFAM: Protein of unknown function DUF2179; SPTR: UPF0316 protein Dhaf_3052; PFAM: Uncharacterized protein conserved in bacteria (DUF2179).


ensembl_gene_id: Sgly_2716
symbol: Sgly_2716
gene_biotype: protein_coding
description:
  Iron-only hydrogenase maturation protein HydG; COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197: IPR010722; KEGG: slp:Slip_0120 biotin and thiamin synthesis associated; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SPTR: Biotin and thiamin synthesis associated; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH.


ensembl_gene_id: Sgly_2717
symbol: Sgly_2717
gene_biotype: protein_coding
description:
  Fumarase; COGs: COG1027 Aspartate ammonia-lyase; InterPro IPR000362: IPR018951; KEGG: pth:PTH_0981 aspartate ammonia-lyase; PFAM: Fumarate lyase; Fumarase C, C-terminal; PRIAM: Aspartate ammonia-lyase; SPTR: Aspartate ammonia-lyase; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase.


ensembl_gene_id: Sgly_2718
symbol: Sgly_2718
gene_biotype: protein_coding
description:
  Iron-only hydrogenase maturation protein HydF; COGs: COG1160 GTPase; InterPro IPR002917: IPR005225; KEGG: pth:PTH_0982 GTPase; PFAM: GTP-binding protein, HSR1-related; SPTR: Predicted GTPase; TIGRFAM: Small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.


ensembl_gene_id: Sgly_2719
symbol: Sgly_2719
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: dhd:Dhaf_0100 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulat [...]


ensembl_gene_id: Sgly_2720
symbol: Sgly_2720
gene_biotype: protein_coding
description:
  COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: dhd:Dhaf_0099 histidine kinase; PFAM: ATPase-like, ATP-binding domain; SPTR: Histidine kinase.


ensembl_gene_id: Sgly_2721
symbol: Sgly_2721
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: dhd:Dhaf_0098 geranylgeranyl pyrophosphate synthase-like protein; PFAM: Polyprenyl synthetase; SPTR: Putative uncharacterized protein; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Sgly_2724
symbol: Sgly_2724
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2089; COGs: COG3877 conserved hypothetical protein; InterPro IPR018658; KEGG: aoe:Clos_0021 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function(DUF2089).


ensembl_gene_id: Sgly_2725
symbol: Sgly_2725
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197: IPR012840; KEGG: bpb:bpr_III031 anaerobic ribonucleoside triphosphate reductase activating protein NrdG2; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic-like; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein.


ensembl_gene_id: Sgly_2726
symbol: Sgly_2726
gene_biotype: protein_coding
description:
  COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR005144: IPR012833; KEGG: thx:Thet_1768 anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase.


ensembl_gene_id: Sgly_2727
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor nrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Sgly_2728
symbol: Sgly_2728
gene_biotype: protein_coding
description:
  COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: afl:Aflv_2814 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; PRIAM: Acetaldehyde dehydrogenase (acetylating); SPTR: Iron-containing alcohol dehydrogenase; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: Sgly_2731
symbol: Sgly_2731
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: dhd:Dhaf_2838 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_2733
symbol: Sgly_2733
gene_biotype: protein_coding
description:
  COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005856: IPR005859; KEGG: gur:Gura_3859 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: Sgly_2734
symbol: Sgly_2734
gene_biotype: protein_coding
description:
  COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005856: IPR005859; KEGG: pth:PTH_0247 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: Sgly_2735
symbol: Sgly_2735
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: ccb:Clocel_1141 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF894).


ensembl_gene_id: Sgly_2736
symbol: Sgly_2736
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG4552 acetyltransferase involved in intracellular survival and related acetyltransferase; InterPro IPR000182; KEGG: cyc:PCC7424_5250 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_2737
symbol: Sgly_2737
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: hmo:HM1_3019 nitroreductase family protein; PFAM: Nitroreductase-like; SPTR: Nitroreductase family protein; PFAM: Nitroreductase family.


ensembl_gene_id: Sgly_2738
symbol: Sgly_2738
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein; COGs: COG1751 conserved hypothetical protein; KEGG: dae:Dtox_0888 putative cytoplasmic protein; SPTR: Putative cytoplasmic protein; manually curated; PFAM: Pyruvate kinase, alpha/beta domain.


ensembl_gene_id: Sgly_2739
symbol: Sgly_2739
gene_biotype: protein_coding
description:
  Phosphinothricin acetyltransferase; COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182; KEGG: hje:HacjB3_14900 phosphinothricin N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Phosphinothricin acetyltransferase; SPTR: Phosphinothricin N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_2740
symbol: Sgly_2740
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: bid:Bind_1234 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Sgly_2741
symbol: Sgly_2741
gene_biotype: protein_coding
description:
  InterPro IPR000182; KEGG: amt:Amet_1419 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_2742
symbol: Sgly_2742
gene_biotype: protein_coding
description:
  COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005856: IPR005859; KEGG: cth:Cthe_1840 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase A; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases.


ensembl_gene_id: Sgly_2743
symbol: Sgly_2743
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: dsy:DSY4009 putative nitrogenase iron-molybdenum protein alpha chain; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative nitrogenase iron-molybdenum protein alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_2744
symbol: Sgly_2744
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2540 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_2751
symbol: Sgly_2751
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_0986 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Peptidase C39 family.


ensembl_gene_id: Sgly_2756
symbol: Sgly_2756
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: ttm:Tthe_2290 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_2757
symbol: Sgly_2757
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG3315 O-Methyltransferase involved in polyketide biosynthesis; KEGG: ckr:CKR_0062 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Leucine carboxyl methyltransferase.


ensembl_gene_id: Sgly_2758
symbol: Sgly_2758
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR003439; KEGG: dhd:Dhaf_4630 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_2759
symbol: Sgly_2759
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: dhd:Dhaf_4629 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_2760
symbol: Sgly_2760
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: ssm:Spirs_3496 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_2761
symbol: Sgly_2761
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: cbe:Cbei_0611 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; PFAM: NMT1/THI5 like.


ensembl_gene_id: Sgly_2762
symbol: Sgly_2762
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: ckr:CKR_0945 hypothetical protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; manually curated; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_2763
symbol: Sgly_2763
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: ckr:CKR_0944 hypothetical protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_2764
symbol: Sgly_2764
gene_biotype: protein_coding
description:
  COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: geo:Geob_2470 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; PFAM: NMT1/THI5 like.


ensembl_gene_id: Sgly_2765
symbol: Sgly_2765
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: geo:Geob_2490 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_2766
symbol: Sgly_2766
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: geo:Geob_2489 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_2767
symbol: Sgly_2767
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: geo:Geob_2492 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_2768
symbol: Sgly_2768
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: gur:Gura_3871 hypothetical protein; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; PFAM: Nitroreductase family.


ensembl_gene_id: Sgly_2769
symbol: Sgly_2769
gene_biotype: protein_coding
description:
  InterPro IPR003731; KEGG: geo:Geob_2497 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor.


ensembl_gene_id: Sgly_2770
symbol: Sgly_2770
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 1; COGs: COG0546 phosphatase; InterPro IPR005834: IPR006439; KEGG: amu:Amuc_0718 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase domain protein hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: Sgly_2772
symbol: Sgly_2772
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2539 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Sgly_2774
symbol: Sgly_2774
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: gym:GYMC10_3653 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regul [...]


ensembl_gene_id: Sgly_2775
symbol: Sgly_2775
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2500 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_2777
symbol: Sgly_2777
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2491 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_2778
symbol: Sgly_2778
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2460 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Sgly_2779
symbol: Sgly_2779
gene_biotype: protein_coding
description:
  Ig domain protein; COGs: COG2836 conserved hypothetical protein; InterPro IPR011080; KEGG: ckr:CKR_0963 hypothetical protein; PFAM: Bacterial Ig-like; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 3).


ensembl_gene_id: Sgly_2780
symbol: Sgly_2780
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR007253; KEGG: clj:CLJU_c24750 putative cell wall-binding protein; PFAM: Putative cell wall binding repeat 2; SPTR: Predicted cell wall binding protein; PFAM: Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_2781
symbol: Sgly_2781
gene_biotype: protein_coding
description:
  COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712: IPR003594; KEGG: gym:GYMC10_3654 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Sgly_2782
symbol: Sgly_2782
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR006121: IPR008250: IPR005834: IPR006403: IPR 006416: IPR001757; KEGG: ckr:CKR_1972 hypothetical protein; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; Heavy-metal-associated [...]


ensembl_gene_id: Sgly_2783
symbol: Sgly_2783
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: vsa:VSAL_I0571 integral membrane protein; SPTR: Integral membrane protein.


ensembl_gene_id: Sgly_2784
symbol: Sgly_2784
gene_biotype: protein_coding
description:
  Cysteine synthase; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: dsy:DSY3983 hypothetical protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Putative uncharacterized protein; PFAM: Cys/Met metabolism PLP-dependent enzyme.


ensembl_gene_id: Sgly_2785
symbol: Sgly_2785
gene_biotype: protein_coding
description:
  COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: amt:Amet_3706 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.


ensembl_gene_id: Sgly_2787
symbol: Sgly_2787
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2539 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_2788
symbol: Sgly_2788
gene_biotype: protein_coding
description:
  Methionine synthase B12-binding module cap domain protein; COGs: COG5012 cobalamin binding protein; InterPro IPR003759: IPR006158; KEGG: cth:Cthe_2784 cobalamin B12-binding protein; PFAM: Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; SPTR: Cobalamin B12-binding protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family.


ensembl_gene_id: Sgly_2790
symbol: Sgly_2790
gene_biotype: protein_coding
description:
  COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005859: IPR005856; KEGG: cth:Cthe_1840 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: Sgly_2791
symbol: Sgly_2791
gene_biotype: protein_coding
description:
  COGs: COG4378 conserved hypothetical protein; KEGG: aoe:Clos_1708 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325).


ensembl_gene_id: Sgly_2792
symbol: Sgly_2792
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2501 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_2794
symbol: Sgly_2794
gene_biotype: protein_coding
description:
  COGs: COG0371 Glycerol dehydrogenase; InterPro IPR002658; KEGG: tjr:TherJR_0633 iron-containing alcohol dehydrogenase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: Glycerol dehydrogenase; SPTR: Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase.


ensembl_gene_id: Sgly_2795
symbol: hisC-2
gene_biotype: protein_coding
description:
  COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR005861: IPR004839; KEGG: csc:Csac_2697 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate amino [...]


ensembl_gene_id: Sgly_2796
symbol: Sgly_2796
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR011432: IPR007253; KEGG: mac:MA3471 hypothetical protein; PFAM: Putative cell wall binding repeat 2; Protein of unknown function DUF1533; SPTR: Putative uncharacterized protein; PFAM: The GLUG motif; Putative cell wall binding repeat 2; Protein of unknown function (DUF1533).


ensembl_gene_id: Sgly_2797
symbol: Sgly_2797
gene_biotype: protein_coding
description:
  VanZ family protein; InterPro IPR006976; KEGG: clj:CLJU_c10800 VanZ like protein; PFAM: VanZ-like; SPTR: VanZ like protein; PFAM: VanZ like family.


ensembl_gene_id: Sgly_2798
symbol: Sgly_2798
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR003439; KEGG: shi:Shel_25700 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system, ATPase and permease components; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_2799
symbol: Sgly_2799
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: shi:Shel_25690 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_2800
symbol: Sgly_2800
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: ckr:CKR_3297 hypothetical protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Sgly_2802
symbol: Sgly_2802
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: clj:CLJU_c17500 putative chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis protein signaling domain protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_2803
symbol: Sgly_2803
gene_biotype: protein_coding
description:
  InterPro IPR003731; KEGG: cbe:Cbei_0627 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor.


ensembl_gene_id: Sgly_2804
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: Sgly_2805
symbol: Sgly_2805
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2292; InterPro IPR018743; KEGG: ckr:CKR_0743 hypothetical protein; PFAM: Protein of unknown function DUF2292; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized small protein (DUF2292).


ensembl_gene_id: Sgly_2806
symbol: Sgly_2806
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2292; InterPro IPR018743; KEGG: cbe:Cbei_0619 hypothetical protein; PFAM: Protein of unknown function DUF2292; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized small protein (DUF2292).


ensembl_gene_id: Sgly_2807
symbol: Sgly_2807
gene_biotype: protein_coding
description:
  NLPA lipoprotein; COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004872; KEGG: ckr:CKR_0740 hypothetical protein; PFAM: NLPA lipoprotein; SPTR: Putative uncharacterized protein; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family.


ensembl_gene_id: Sgly_2808
symbol: Sgly_2808
gene_biotype: protein_coding
description:
  COGs: COG2011 ABC-type metal ion transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_1624 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_2809
symbol: Sgly_2809
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.


ensembl_gene_id: Sgly_2810
symbol: Sgly_2810
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: cbe:Cbei_0628 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.


ensembl_gene_id: Sgly_2812
symbol: Sgly_2812
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089; KEGG: clj:CLJU_c15520 putative methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Predicted methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_2813
symbol: Sgly_2813
gene_biotype: protein_coding
description:
  Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: Sgly_2814
symbol: Sgly_2814
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase, catalytic subunit; COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterPro IPR004137: IPR010047; KEGG: clj:CLJU_c17910 carbon monoxide dehydrogenase catalytic subunit; PFAM: Prismane; PRIAM: Carbon-monoxide dehydrogenase (acceptor); SPTR: Carbon monoxide dehydrogenase, catalytic subunit; TIGRFAM: Carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.


ensembl_gene_id: Sgly_2815
symbol: Sgly_2815
gene_biotype: protein_coding
description:
  Protein of unknown function DUF77; COGs: COG0011 conserved hypothetical protein; InterPro IPR002767; KEGG: fma:FMG_1489 hypothetical protein; PFAM: Protein of unknown function DUF77; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF77; PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family.


ensembl_gene_id: Sgly_2817
symbol: Sgly_2817
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674: IPR003607: IPR006675; KEGG: cce:Ccel_0497 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Metal dependent phosphohydrolase; TIGRFAM: HDIG; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Sgly_2818
symbol: Sgly_2818
gene_biotype: protein_coding
description:
  SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: cbe:Cbei_3249 SNARE associated golgi protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein.


ensembl_gene_id: Sgly_2820
symbol: Sgly_2820
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR018392: IPR011098: IPR016047: IPR002482; KEGG: dsy:DSY1605 hypothetical protein; PFAM: Peptidase M23; G5; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M23; G5 domain; LysM domain.


ensembl_gene_id: Sgly_2824
symbol: Sgly_2824
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cbe:Cbei_0615 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_2825
symbol: Sgly_2825
gene_biotype: protein_coding
description:
  COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: cbe:Cbei_0616 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; PFAM: NMT1/THI5 like.


ensembl_gene_id: Sgly_2828
symbol: Sgly_2828
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: geo:Geob_2494 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_2829
symbol: Sgly_2829
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; COGs: COG1217 membrane GTPase involved in stress response; InterPro IPR000795: IPR004161: IPR000640: IPR005225: IPR 006298; KEGG: dhd:Dhaf_2726 GTP-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small [...]


ensembl_gene_id: Sgly_2830
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: Sgly_2831
symbol: Sgly_2831
gene_biotype: protein_coding
description:
  Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: slp:Slip_0309 transcriptional regulator, BadM/Rrf2 family; PFAM: Transcription regulator Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator).


ensembl_gene_id: Sgly_2833
symbol: Sgly_2833
gene_biotype: protein_coding
description:
  Nitrogenase iron-iron accessory protein AnfO; InterPro IPR014287; KEGG: dae:Dtox_1032 hypothetical protein; PFAM: Nitrogenase iron-iron, accessory protein AnfO; SPTR: Putative uncharacterized protein; PFAM: Iron only nitrogenase protein AnfO (AnfO_nitrog); TIGRFAM: Fe-only nitrogenase accessory protein AnfO.


ensembl_gene_id: Sgly_2834
symbol: Sgly_2834
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197: IPR006638; KEGG: dae:Dtox_1030 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.


ensembl_gene_id: Sgly_2835
symbol: Sgly_2835
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: dae:Dtox_1029 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Sgly_2836
symbol: Sgly_2836
gene_biotype: protein_coding
description:
  Nitrogenase MoFe cofactor biosynthesis protein NifE; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510: IPR005973; KEGG: drm:Dred_2816 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: Nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Sgly_2837
symbol: Sgly_2837
gene_biotype: protein_coding
description:
  InterPro IPR014283; KEGG: hmo:HM1_0860 ferredoxin III, nif-specific, putative; SPTR: Ferredoxin iii, nif-specific, putative; TIGRFAM: Ferredoxin III 4[4Fe-4S], nif-specific; PFAM: 4Fe-4S binding domain; TIGRFAM: ferredoxin III, nif-specific.


ensembl_gene_id: Sgly_2838
symbol: Sgly_2838
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifX; InterPro IPR003731: IPR013480; KEGG: hmo:HM1_0861 NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; SPTR: NifX; TIGRFAM: Nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX.


ensembl_gene_id: Sgly_2839
symbol: Sgly_2839
gene_biotype: protein_coding
description:
  Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Sgly_2840
symbol: Sgly_2840
gene_biotype: protein_coding
description:
  Mo-nitrogenase MoFe protein subunit NifD precursor; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510: IPR005972: IPR010143; KEGG: hmo:HM1_0865 dinitrogenase molybdenum-iron protein alpha subunit NifD; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase protein alpha chain; TIGRFAM: Nitrogenase molybdenum-iron protein alpha chain; Nitrogenase component 1, alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase alpha chain; nitrogenase molybdenum-iron protein alpha chain.


ensembl_gene_id: Sgly_2841
symbol: nifH-2
gene_biotype: protein_coding
description:
  Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: Sgly_2842
symbol: Sgly_2842
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: hmo:HM1_0867 nitrogen regulatory protein p-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein p-ii; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Sgly_2843
symbol: Sgly_2843
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: hmo:HM1_0868 nitrogen regulatory protein p-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein p-ii; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Sgly_2845
symbol: Sgly_2845
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: ckr:CKR_0324 hypothetical protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Sgly_2846
symbol: Sgly_2846
gene_biotype: protein_coding
description:
  COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR000991; KEGG: ckr:CKR_0323 hypothetical protein; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Putative uncharacterized protein; PFAM: Glutamine amidotransferase class-I.


ensembl_gene_id: Sgly_2848
symbol: Sgly_2848
gene_biotype: protein_coding
description:
  Fe-only nitrogenase FeFe protein subunit AnfK; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510: IPR014280; KEGG: ckr:CKR_0322 hypothetical protein; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative uncharacterized protein; TIGRFAM: Nitrogenase iron-iron, beta subunit; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: Fe-only nitrogenase, beta subunit; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: Sgly_2849
symbol: Sgly_2849
gene_biotype: protein_coding
description:
  Fe-only nitrogenase FeFe protein subunit AnfG; InterPro IPR004349: IPR014278; KEGG: ckr:CKR_0321 hypothetical protein; PFAM: Vanadium/alternative nitrogenase delta subunit; PRIAM: Nitrogenase; SPTR: Putative uncharacterized protein; TIGRFAM: Nitrogenase iron-iron, delta subunit; PFAM: Vanadium/alternative nitrogenase delta subunit; TIGRFAM: Fe-only nitrogenase, delta subunit.


ensembl_gene_id: Sgly_2850
symbol: Sgly_2850
gene_biotype: protein_coding
description:
  Fe-only nitrogenase FeFe protein subunit AnfD precursor; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510: IPR011290: IPR005974: IPR010143; KEGG: ckr:CKR_0320 hypothetical protein; PFAM: Nitrogenase/oxidoreductase, component 1; PRIAM: Nitrogenase; SPTR: Nitrogenase protein alpha chain; TIGRFAM: Nitrogenase iron-iron protein, alpha chain; Nitrogenase alpha chain; Nitrogenase component 1, alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase alpha chain; nitrogenase iron-iron p [...]


ensembl_gene_id: Sgly_2851
symbol: Sgly_2851
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mac:MA1211 P-II family nitrogen regulatory protein; PFAM: Nitrogen regulatory protein PII; SPTR: P-II family nitrogen regulatory protein; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Sgly_2852
symbol: Sgly_2852
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mac:MA1212 P-II family nitrogen regulatory protein; PFAM: Nitrogen regulatory protein PII; SPTR: P-II family nitrogen regulatory protein; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Sgly_2854
symbol: Sgly_2854
gene_biotype: protein_coding
description:
  DNA binding domain protein, excisionase family; COGs: COG1910 Periplasmic molybdate-binding protein/domain; InterPro IPR010093; KEGG: ckr:CKR_2727 hypothetical protein; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Sgly_2855
symbol: Sgly_2855
gene_biotype: protein_coding
description:
  KEGG: cce:Ccel_0631 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Sgly_2856
symbol: mqnE
gene_biotype: protein_coding
description:
  Putative menaquinone biosynthesis protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: Sgly_2857
symbol: mqnA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Sgly_2858
symbol: mqnC
gene_biotype: protein_coding
description:
  Menaquinone biosynthesis protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Sgly_2859
symbol: Sgly_2859
gene_biotype: protein_coding
description:
  Homocysteine S-methyltransferase; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726: IPR003171; KEGG: ckr:CKR_1635 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; PFAM: Homocysteine S-methyltransferase; Methylenetetrahydrofolate reductase; SPTR: Methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; Homocysteine S-methyltransferase.


ensembl_gene_id: Sgly_2860
symbol: metE
gene_biotype: protein_coding
description:
  Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: Sgly_2861
symbol: Sgly_2861
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847; KEGG: ccb:Clocel_0500 transcriptional regulator, LysR family; PFAM: HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.


ensembl_gene_id: Sgly_2863
symbol: Sgly_2863
gene_biotype: protein_coding
description:
  COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277: IPR006235; KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase.


ensembl_gene_id: Sgly_2864
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Sgly_2865
symbol: Sgly_2865
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: dae:Dtox_4189 aminotransferase class IV; PFAM: Aminotransferase, class IV; PRIAM: Aminodeoxychorismate lyase; SPTR: Aminotransferase class IV; PFAM: Aminotransferase class IV.


ensembl_gene_id: Sgly_2868
symbol: Sgly_2868
gene_biotype: protein_coding
description:
  COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890: IPR005802; KEGG: amt:Amet_2158 para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; PRIAM: Anthranilate synthase; SPTR: Para-aminobenzoate synthase, subunit I; TIGRFAM: Para-aminobenzoate synthase, component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade.


ensembl_gene_id: Sgly_2869
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Sgly_2871
symbol: trpF
gene_biotype: protein_coding
description:
  COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: cth:Cthe_0871 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.


ensembl_gene_id: Sgly_2872
symbol: trpC
gene_biotype: protein_coding
description:
  COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: cth:Cthe_0872 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Putative uncharacterized protein; PFAM: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.


ensembl_gene_id: Sgly_2873
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Sgly_2874
symbol: Sgly_2874
gene_biotype: protein_coding
description:
  COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991: IPR006221; KEGG: cth:Cthe_0874 anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I, C-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase, component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.


ensembl_gene_id: Sgly_2875
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...]


ensembl_gene_id: Sgly_2876
symbol: Sgly_2876
gene_biotype: protein_coding
description:
  YibE/F family protein; COGs: COG5438 multitransmembrane protein; InterPro IPR012507; KEGG: cno:NT01CX_0212 hypothetical protein; PFAM: YibE/F-like; SPTR: YibE/F family protein; PFAM: YibE/F-like protein.


ensembl_gene_id: Sgly_2877
symbol: Sgly_2877
gene_biotype: protein_coding
description:
  Regulatory protein MarR; InterPro IPR000835; KEGG: cbl:CLK_2797 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Sgly_2878
symbol: Sgly_2878
gene_biotype: protein_coding
description:
  InterPro IPR011701; KEGG: dhd:Dhaf_1114 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; PFAM: Bacterial protein of unknown function (DUF894).


ensembl_gene_id: Sgly_2879
symbol: Sgly_2879
gene_biotype: protein_coding
description:
  Precorrin-8X methylmutase CbiC/CobH; COGs: COG2082 Precorrin isomerase; InterPro IPR003722; KEGG: mru:mru_0894 precorrin-8X methylmutase CbiC; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core; SPTR: Precorrin isomerase; PFAM: Precorrin-8X methylmutase.


ensembl_gene_id: Sgly_2880
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: Sgly_2881
symbol: Sgly_2881
gene_biotype: protein_coding
description:
  COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR019304: IPR006124; KEGG: apo:Arcpr_1280 proposed homoserine kinase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: Proposed homoserine kinase; PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form.


ensembl_gene_id: Sgly_2882
symbol: Sgly_2882
gene_biotype: protein_coding
description:
  Aminotransferase class I and II; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839; KEGG: cce:Ccel_1287 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Putative uncharacterized protein; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase.


ensembl_gene_id: Sgly_2883
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: Sgly_2884
symbol: cbiA
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: Sgly_2885
symbol: Sgly_2885
gene_biotype: protein_coding
description:
  Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; COGs: COG2242 Precorrin-6B methylase 2; InterPro IPR000878: IPR012818: IPR014008; KEGG: cpy:Cphy_1379 precorrin-6x reductase; PFAM: Tetrapyrrole methylase; PRIAM: Precorrin-6Y C(5,15)-methyltransferase (decarboxylating); SPTR: Putative uncharacterized protein; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; PFAM: Ribosomal RNA adenine dimethylase; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFA [...]


ensembl_gene_id: Sgly_2886
symbol: Sgly_2886
gene_biotype: protein_coding
description:
  Cobalamin (vitamin B12) biosynthesis CbiX protein; COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: cce:Ccel_1281 cobalamin (vitamin B12) biosynthesis CbiX protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiX protein; PFAM: CbiX.


ensembl_gene_id: Sgly_2887
symbol: hemL
gene_biotype: protein_coding
description:
  COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; InterPro IPR005814: IPR004639; KEGG: cpy:Cphy_1373 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Putative uncharacterized protein; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.


ensembl_gene_id: Sgly_2888
symbol: Sgly_2888
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: cpy:Cphy_1788 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; manually curated; PFAM: Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.


ensembl_gene_id: Sgly_2889
symbol: Sgly_2889
gene_biotype: protein_coding
description:
  COGs: COG2099 Precorrin-6x reductase; InterPro IPR003723; KEGG: cce:Ccel_1276 precorrin-6x reductase; PFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; SPTR: Putative uncharacterized protein; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase.


ensembl_gene_id: Sgly_2890
symbol: Sgly_2890
gene_biotype: protein_coding
description:
  COGs: COG1010 Precorrin-3B methylase; InterPro IPR000878: IPR006363; KEGG: cpy:Cphy_1378 precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Precorrin-3B C(17)-methyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase.


ensembl_gene_id: Sgly_2891
symbol: Sgly_2891
gene_biotype: protein_coding
description:
  COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: cpy:Cphy_1377 cobalamin (vitamin B12) biosynthesis CbiG protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiG protein; PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal.


ensembl_gene_id: Sgly_2892
symbol: Sgly_2892
gene_biotype: protein_coding
description:
  COGs: COG2875 Precorrin-4 methylase; InterPro IPR000878: IPR006362; KEGG: cce:Ccel_1272 precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Precorrin-4 C(11)-methyltransferase; SPTR: Precorrin-4 C11-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase.


ensembl_gene_id: Sgly_2893
symbol: Sgly_2893
gene_biotype: protein_coding
description:
  COGs: COG2243 Precorrin-2 methylase; InterPro IPR000878: IPR006364; KEGG: cpy:Cphy_1375 precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Precorrin-2 C(20)-methyltransferase; SPTR: Precorrin-2 C20-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase.


ensembl_gene_id: Sgly_2894
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-6A synthase (deacetylating); Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: Sgly_2895
symbol: Sgly_2895
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: Sgly_2896
symbol: Sgly_2896
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, inner membrane subunit CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339: IPR012809; KEGG: dhd:Dhaf_2603 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; SPTR: Putative uncharacterized protein; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.


ensembl_gene_id: Sgly_2897
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt transport protein cbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: Sgly_2898
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: Sgly_2899
symbol: Sgly_2899
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; COGs: COG2109 ATP:corrinoid adenosyltransferase; InterPro IPR003724; KEGG: cce:Ccel_1333 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; SPTR: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase.


ensembl_gene_id: Sgly_2900
symbol: Sgly_2900
gene_biotype: protein_coding
description:
  Cobalbumin biosynthesis protein; COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: cbe:Cbei_1266 cobalamin biosynthesis protein CobU, putative, truncation; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase; SPTR: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase.


ensembl_gene_id: Sgly_2901
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: Sgly_2902
symbol: Sgly_2902
gene_biotype: protein_coding
description:
  Cobalbumin biosynthesis protein; COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: bmd:BMD_1953 bifunctional adenosylcobalamin biosynthesis protein CobU; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase; SPTR: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase.


ensembl_gene_id: Sgly_2903
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: Sgly_2904
symbol: Sgly_2904
gene_biotype: protein_coding
description:
  Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: drm:Dred_2721 iron dependent repressor; PFAM: Iron dependent repressor; SMART: Iron dependent repressor; SPTR: Iron dependent repressor; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.


ensembl_gene_id: Sgly_2905
symbol: Sgly_2905
gene_biotype: protein_coding
description:
  Nucleoside recognition domain protein; COGs: COG0370 Fe2+ transport system protein B; InterPro IPR011619: IPR011642: IPR011640; KEGG: dsy:DSY2609 hypothetical protein; PFAM: Nucleoside recognition; Ferrous iron transport protein B, N-terminal; Ferrous iron transport protein B, C-terminal; SPTR: Putative uncharacterized protein; PFAM: Ferrous iron transport protein B C terminus; Nucleoside recognition.


ensembl_gene_id: Sgly_2906
symbol: Sgly_2906
gene_biotype: protein_coding
description:
  Small GTP-binding protein; COGs: COG0370 Fe2+ transport system protein B; InterPro IPR002917: IPR011619: IPR005225; KEGG: dsy:DSY2610 hypothetical protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Small GTP-binding protein; PFAM: Ferrous iron transport protein B; TIGRFAM: small GTP-binding protein domain.


ensembl_gene_id: Sgly_2907
symbol: Sgly_2907
gene_biotype: protein_coding
description:
  FeoA family protein; COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: cth:Cthe_1403 hypothetical protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: FeoA; PFAM: FeoA domain.


ensembl_gene_id: Sgly_2909
symbol: Sgly_2909
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: amt:Amet_3807 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: Sgly_2910
symbol: Sgly_2910
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: amt:Amet_3808 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: Sgly_2912
symbol: Sgly_2912
gene_biotype: protein_coding
description:
  Flavodoxin; COGs: COG0426 flavoprotein; InterPro IPR008254: IPR010087; KEGG: dhd:Dhaf_0741 flavodoxin; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Flavodoxin; TIGRFAM: Flavodoxin, short chain; PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain.


ensembl_gene_id: Sgly_2914
symbol: Sgly_2914
gene_biotype: protein_coding
description:
  NAD(P)-dependent iron-only hydrogenase catalytic subunit; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterPro IPR001041: IPR019574: IPR004108: IPR003149: IPR 013352; KEGG: cce:Ccel_2467 hydrogenase, Fe-only; PFAM: Iron hydrogenase, large subunit, C-terminal; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Iron hydrogenase, small subunit-like; SPTR: Hydrogenase, Fe-only; TIGRFAM: Iron hydrogenase, subset; PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron h [...]


ensembl_gene_id: Sgly_2915
symbol: Sgly_2915
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit F; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538: IPR019554: IPR019575; KEGG: tna:CTN_0458 NADP-reducing hydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.


ensembl_gene_id: Sgly_2916
symbol: Sgly_2916
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: sat:SYN_02139 NADH-quinone oxidoreductase chain F; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Ubiquinone) 24 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.


ensembl_gene_id: Sgly_2917
symbol: Sgly_2917
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecQ-like protein; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR011545: IPR001650: IPR018982: IPR002121: IPR 014001: IPR006293: IPR018329; KEGG: dhd:Dhaf_2928 ATP-dependent DNA helicase RecQ; PFAM: RQC domain; DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase/RNase D C-terminal, HRDC domain; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase [...]


ensembl_gene_id: Sgly_2918
symbol: Sgly_2918
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: dhd:Dhaf_2528 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_2919
symbol: Sgly_2919
gene_biotype: protein_coding
description:
  Peptidase M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: cce:Ccel_1748 peptidase M50; PFAM: Peptidase M50; SPTR: Peptidase M50; PFAM: Peptidase family M50.


ensembl_gene_id: Sgly_2920
symbol: Sgly_2920
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: cac:CA_C2828 MutT/NUDIX family hydrolase/pyrophosphatase; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein.


ensembl_gene_id: Sgly_2921
symbol: Sgly_2921
gene_biotype: protein_coding
description:
  InterPro IPR004365; KEGG: pcb:PC000361.00.0 hypothetical protein; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Putative uncharacterized protein; PFAM: OB-fold nucleic acid binding domain.


ensembl_gene_id: Sgly_2922
symbol: Sgly_2922
gene_biotype: protein_coding
description:
  Diguanylate cyclase and metal dependent phosphohydrolase; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR013656: IPR000160: IPR006674: IPR000014; KEGG: mta:Moth_0689 putative PAS/PAC sensor protein; PFAM: Diguanylate cyclase, predicted; PAS fold-4; Metal-dependent phosphohydrolase, HD subdomain; SMART: Diguanylate cyclase, predicted; PAS; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: HD domain; GGDEF domain; Putative sugar diacid recognition; PAS fold; TIGRFAM: PAS domain S-box; digu [...]


ensembl_gene_id: Sgly_2923
symbol: Sgly_2923
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: dhd:Dhaf_2918 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_2924
symbol: Sgly_2924
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660: IPR003661: IPR003594; KEGG: dsy:DSY1767 hypothetical protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Putative uncharacterized protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_2926
symbol: Sgly_2926
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dhd:Dhaf_2922 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_2928
symbol: Sgly_2928
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cbe:Cbei_1923 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Sgly_2929
symbol: Sgly_2929
gene_biotype: protein_coding
description:
  COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR000991; KEGG: ccb:Clocel_3264 glutamine amidotransferase class-I; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Glutamine amidotransferase class-I; PFAM: Glutamine amidotransferase class-I.


ensembl_gene_id: Sgly_2931
symbol: addB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: Sgly_2932
symbol: Sgly_2932
gene_biotype: protein_coding
description:
  Transcriptional regulator, HxlR family; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: clj:CLJU_c26360 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator, HxlR family; PFAM: HxlR-like helix-turn-helix.


ensembl_gene_id: Sgly_2933
symbol: Sgly_2933
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: deg:DehalGT_0983 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Putative iron-sulfur flavoprotein; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Sgly_2934
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: Sgly_2935
symbol: Sgly_2935
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013655: IPR000160: IPR001633: IPR001610: IPR 000014; KEGG: tte:TTE1081 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PRIAM: Diguanylate kinase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; SPTR: PAS fold family protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: EAL domain; GGDE [...]


ensembl_gene_id: Sgly_2936
symbol: Sgly_2936
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: Sgly_2937
symbol: Sgly_2937
gene_biotype: protein_coding
description:
  Sigma 54 interacting domain protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dsy:DSY4805 hypothetical protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_2938
symbol: Sgly_2938
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dhd:Dhaf_4677 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; manually curated; PFAM: Predicted permease.


ensembl_gene_id: Sgly_2939
symbol: Sgly_2939
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089: IPR006143; KEGG: dhd:Dhaf_4678 efflux transporter, RND family, MFP subunit; PFAM: Biotin/lipoyl attachment; SPTR: Putative uncharacterized protein; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.


ensembl_gene_id: Sgly_2990
symbol: Sgly_2990
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: tjr:TherJR_0264 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.


ensembl_gene_id: Sgly_2991
symbol: Sgly_2991
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ttm:Tthe_2580 secretion protein HlyD family protein; PFAM: Secretion protein HlyD; SPTR: Secretion protein, HlyD family; PFAM: HlyD family secretion protein.


ensembl_gene_id: Sgly_2992
symbol: Sgly_2992
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: drm:Dred_3059 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_2993
symbol: Sgly_2993
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR003961: IPR007253; KEGG: dhd:Dhaf_4482 putative cell wall binding repeat 2-containing protein; PFAM: Putative cell wall binding repeat 2; Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Putative cell wall binding repeat 2-containing protein; PFAM: Putative cell wall binding repeat 2; Fibronectin type III domain.


ensembl_gene_id: Sgly_2996
symbol: Sgly_2996
gene_biotype: protein_coding
description:
  InterPro IPR007253; KEGG: dsy:DSY3329 hypothetical protein; PFAM: Putative cell wall binding repeat 2; SPTR: Putative uncharacterized protein; PFAM: Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_2997
symbol: Sgly_2997
gene_biotype: protein_coding
description:
  Subtilisin; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209: IPR007253; KEGG: tjr:TherJR_2324 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Putative cell wall binding repeat 2; PRIAM: Subtilisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Putative cell wall binding repeat 2; Subtilase family.


ensembl_gene_id: Sgly_2998
symbol: Sgly_2998
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 18; COGs: COG3858 glycosyl hydrolase; InterPro IPR007253: IPR001223: IPR011583; KEGG: dhd:Dhaf_4489 glycoside hydrolase family 18; PFAM: Glycoside hydrolase, family 18, catalytic domain; Putative cell wall binding repeat 2; SMART: Chitinase II; SPTR: Glycoside hydrolase family 18; PFAM: Glycosyl hydrolases family 18; Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_2999
symbol: Sgly_2999
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate galactose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: dhd:Dhaf_4500 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase.


ensembl_gene_id: Sgly_3000
symbol: Sgly_3000
gene_biotype: protein_coding
description:
  Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: mpd:MCP_0774 putative aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Putative aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Sgly_3001
symbol: Sgly_3001
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dhd:Dhaf_4499 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Sgly_3002
symbol: Sgly_3002
gene_biotype: protein_coding
description:
  O-antigen polymerase; InterPro IPR007016; KEGG: dhd:Dhaf_4498 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase; PFAM: O-Antigen ligase.


ensembl_gene_id: Sgly_3003
symbol: Sgly_3003
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dsy:DSY3339 hypothetical protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.


ensembl_gene_id: Sgly_3004
symbol: Sgly_3004
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dhd:Dhaf_4495 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Sgly_3005
symbol: Sgly_3005
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: saf:SULAZ_0352 glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Sgly_3007
symbol: Sgly_3007
gene_biotype: protein_coding
description:
  Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: dhd:Dhaf_4493 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Putative uncharacterized protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Sgly_3008
symbol: Sgly_3008
gene_biotype: protein_coding
description:
  Transferase hexapeptide repeat containing protein; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR001451; KEGG: dhd:Dhaf_4502 UDP-3-O-(3-hydroxymyristoyl)-like protein; PFAM: Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-(3-hydroxymyristoyl)-like protein; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: Sgly_3009
symbol: Sgly_3009
gene_biotype: protein_coding
description:
  Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: dsy:DSY3345 hypothetical protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.


ensembl_gene_id: Sgly_3010
symbol: Sgly_3010
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: dhd:Dhaf_4504 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Putative uncharacterized protein; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase famil [...]


ensembl_gene_id: Sgly_3011
symbol: Sgly_3011
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003781: IPR003869; KEGG: dsy:DSY3347 hypothetical protein; PFAM: Polysaccharide biosynthesis protein CapD-like; CoA-binding; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.


ensembl_gene_id: Sgly_3012
symbol: Sgly_3012
gene_biotype: protein_coding
description:
  Lytic transglycosylase catalytic; COGs: COG2247 Putative cell wall-binding domain; InterPro IPR008258: IPR007253; KEGG: dsy:DSY3348 hypothetical protein; PFAM: Lytic transglycosylase-like, catalytic; Putative cell wall binding repeat 2; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_3013
symbol: Sgly_3013
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR008258: IPR007253; KEGG: dsy:DSY3348 hypothetical protein; PFAM: Putative cell wall binding repeat 2; Lytic transglycosylase-like, catalytic; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_3015
symbol: Sgly_3015
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1648; COGs: COG5658 integral membrane protein; InterPro IPR012867; KEGG: dhd:Dhaf_4509 protein of unknown function DUF1648; PFAM: Protein of unknown function DUF1648; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1648).


ensembl_gene_id: Sgly_3016
symbol: Sgly_3016
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: cbt:CLH_1991 transcriptional regulator ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator ArsR family; PFAM: Bacterial regulatory protein, arsR family.


ensembl_gene_id: Sgly_3017
symbol: Sgly_3017
gene_biotype: protein_coding
description:
  Metallophosphoesterase; InterPro IPR004843; KEGG: sun:SUN_0863 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.


ensembl_gene_id: Sgly_3018
symbol: Sgly_3018
gene_biotype: protein_coding
description:
  ATP-binding region ATPase domain protein; InterPro IPR003594; KEGG: dhd:Dhaf_2424 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATPase-like, ATP-binding domain; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_3019
symbol: Sgly_3019
gene_biotype: protein_coding
description:
  COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789; KEGG: dsy:DSY1957 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain.


ensembl_gene_id: Sgly_3021
symbol: Sgly_3021
gene_biotype: protein_coding
description:
  COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835: IPR005771; KEGG: dhd:Dhaf_4514 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase.


ensembl_gene_id: Sgly_3022
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Sgly_3024
symbol: Sgly_3024
gene_biotype: protein_coding
description:
  L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: Sgly_3027
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: Sgly_3028
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: Sgly_3029
symbol: Sgly_3029
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Sgly_3030
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Sgly_3031
symbol: Sgly_3031
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Sgly_3033
symbol: Sgly_3033
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Sgly_3034
symbol: Sgly_3034
gene_biotype: protein_coding
description:
  COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043: IPR004410; KEGG: cno:NT01CX_0924 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; PRIAM: [Acyl-carrier-protein] S-malonyltransferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.


ensembl_gene_id: Sgly_3035
symbol: Sgly_3035
gene_biotype: protein_coding
description:
  Enoyl-(acyl-carrier-protein) reductase II; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136: IPR017569; KEGG: cac:CA_C3576 2-nitropropane dioxygenase-like protein; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: Dioxygenase related to 2-nitropropane dioxygenase; TIGRFAM: Enoyl-(acyl-carrier-protein) reductase II, putative; PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II.


ensembl_gene_id: Sgly_3037
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Sgly_3038
symbol: Sgly_3038
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: cno:NT01CX_0920 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Sgly_3039
symbol: Sgly_3039
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG0531 Amino acid transporter; KEGG: chy:CHY_0618 hypothetical protein; SPTR: Putative membrane protein.


ensembl_gene_id: Sgly_3040
symbol: Sgly_3040
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gym:GYMC10_5435 ion transport 2 domain protein; SPTR: Ion transport 2 domain protein.


ensembl_gene_id: Sgly_3041
symbol: Sgly_3041
gene_biotype: protein_coding
description:
  L-lactate permease, putative; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: Sgly_3042
symbol: Sgly_3042
gene_biotype: protein_coding
description:
  Cyclase family protein; COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: cpc:Cpar_2028 cyclase family protein; PFAM: Putative cyclase; SPTR: Cyclase family protein; PFAM: Putative cyclase.


ensembl_gene_id: Sgly_3043
symbol: Sgly_3043
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR003251: IPR004039; KEGG: csc:Csac_2430 rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubrerythrin; PFAM: Rubrerythrin.


ensembl_gene_id: Sgly_3044
symbol: Sgly_3044
gene_biotype: protein_coding
description:
  COGs: COG2033 Desulfoferrodoxin; InterPro IPR004462: IPR002742: IPR004793; KEGG: hor:Hore_05310 desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding domain; Desulfoferrodoxin Dfx; SPTR: Desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding domain; PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.


ensembl_gene_id: Sgly_3045
symbol: Sgly_3045
gene_biotype: protein_coding
description:
  Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: hmo:HM1_0548 rubredoxin-oxygen oxidoreductase, putative; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Rubredoxin-oxygen oxidoreductase, putative; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.


ensembl_gene_id: Sgly_3046
symbol: Sgly_3046
gene_biotype: protein_coding
description:
  COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563: IPR004039; KEGG: ckr:CKR_2483 hypothetical protein; PFAM: Flavin reductase-like, FMN-binding; Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; manually curated; PFAM: Rubredoxin; Flavin reductase like domain.


ensembl_gene_id: Sgly_3048
symbol: Sgly_3048
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase like protein, AhpD family; InterPro IPR003779: IPR004675; KEGG: toc:Toce_1666 carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain.


ensembl_gene_id: Sgly_3049
symbol: Sgly_3049
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545: IPR001650: IPR014001; KEGG: drm:Dred_2292 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: Sgly_3050
symbol: Sgly_3050
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: gym:GYMC10_1345 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: LysR substrate-binding; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.


ensembl_gene_id: Sgly_3052
symbol: Sgly_3052
gene_biotype: protein_coding
description:
  COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: tpe:Tpen_1466 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain protein; PFAM: Universal stress protein family.


ensembl_gene_id: Sgly_3055
symbol: Sgly_3055
gene_biotype: protein_coding
description:
  S-layer domain-containing protein; COGs: COG5263 FOG: Glucan-binding domain (YG repeat); InterPro IPR001119: IPR002479; KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein; PFAM: S-layer homology domain; Putative cell wall binding repeat; SPTR: Peptidoglycan-binding lysin domain protein; PFAM: Putative cell wall binding repeat; S-layer homology domain.


ensembl_gene_id: Sgly_3056
symbol: Sgly_3056
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: cbe:Cbei_2094 ABC transporter, transmembrane region; PFAM: ABC transporter, transmembrane domain; ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, transmembrane region; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_3057
symbol: Sgly_3057
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: gym:GYMC10_5997 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_3058
symbol: Sgly_3058
gene_biotype: protein_coding
description:
  Regulatory protein MarR; InterPro IPR000835; KEGG: cbe:Cbei_2092 transcriptional regulator, TrmB; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, TrmB; PFAM: MarR family.


ensembl_gene_id: Sgly_3059
symbol: Sgly_3059
gene_biotype: protein_coding
description:
  Uncharacterized protein family UPF0150; InterPro IPR005357; KEGG: drm:Dred_1551 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0150).


ensembl_gene_id: Sgly_3060
symbol: Sgly_3060
gene_biotype: protein_coding
description:
  YcfA family protein; InterPro IPR012933; KEGG: clj:CLJU_c31450 hypothetical protein; PFAM: YcfA-like; SPTR: Phage protein; PFAM: YcfA-like protein.


ensembl_gene_id: Sgly_3061
symbol: Sgly_3061
gene_biotype: protein_coding
description:
  LrgB family protein; COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300; KEGG: bpu:BPUM_3487 murein hydrolase LrgB; PFAM: LrgB-like protein; SPTR: Membrane protein, putative; PFAM: LrgB-like family; TIGRFAM: conserved hypothetical protein TIGR00659.


ensembl_gene_id: Sgly_3062
symbol: Sgly_3062
gene_biotype: protein_coding
description:
  LrgA family protein; COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: bsu:BSU38320 holin-like protein; PFAM: LrgA; SPTR: Holin-like protein; PFAM: LrgA family.


ensembl_gene_id: Sgly_3063
symbol: Sgly_3063
gene_biotype: protein_coding
description:
  COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: dba:Dbac_3486 flavin reductase domain protein FMN-binding; PFAM: Flavin reductase-like, FMN-binding; SPTR: Flavin reductase domain protein FMN-binding; PFAM: Flavin reductase like domain.


ensembl_gene_id: Sgly_3064
symbol: Sgly_3064
gene_biotype: protein_coding
description:
  Iron-only hydrogenase maturation protein HydE; COGs: COG0502 Biotin synthase; InterPro IPR007197: IPR006638; KEGG: cbl:CLK_3055 biotin synthase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain-containing protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Sgly_3065
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: Sgly_3067
symbol: Sgly_3067
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation-related protein; InterPro IPR006683: IPR003736; KEGG: cdl:CDR20291_0846 putative thioesterase; PFAM: Thioesterase superfamily; SPTR: Putative uncharacterized protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.


ensembl_gene_id: Sgly_3068
symbol: Sgly_3068
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase; KEGG: ttm:Tthe_2499 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2233).


ensembl_gene_id: Sgly_3070
symbol: Sgly_3070
gene_biotype: protein_coding
description:
  UvrD/REP helicase; COGs: COG3973 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: dhd:Dhaf_2268 ATP-dependent DNA helicase replicase; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein; PFAM: UvrD/REP helicase.


ensembl_gene_id: Sgly_3071
symbol: Sgly_3071
gene_biotype: protein_coding
description:
  Peptidoglycan-binding lysin domain protein; InterPro IPR018392: IPR002482; KEGG: slp:Slip_1660 Mn-containing catalase; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Mn-containing catalase; PFAM: Ferritin-like domain; LysM domain; Belongs to the Dps family.


ensembl_gene_id: Sgly_3072
symbol: Sgly_3072
gene_biotype: protein_coding
description:
  Excinuclease ABC C subunit domain protein; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: cbl:CLK_2762 GIY-YIG domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: GIY-YIG domain protein; PFAM: GIY-YIG catalytic domain.


ensembl_gene_id: Sgly_3073
symbol: Sgly_3073
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: slp:Slip_0516 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Sgly_3074
symbol: Sgly_3074
gene_biotype: protein_coding
description:
  MOSC domain containing protein; COGs: COG2258 conserved hypothetical protein; InterPro IPR005302; KEGG: cbe:Cbei_1991 MOSC domain-containing protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; SPTR: MOSC domain containing protein; PFAM: MOSC domain.


ensembl_gene_id: Sgly_3075
symbol: Sgly_3075
gene_biotype: protein_coding
description:
  COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: dae:Dtox_3499 molybdopterin-guanine dinucleotide biosynthesis protein B; SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB), conserved domain; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB.


ensembl_gene_id: Sgly_3076
symbol: Sgly_3076
gene_biotype: protein_coding
description:
  COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR001453: IPR020817; KEGG: hmo:HM1_0061 molybdenum cofactor biosynthesis protein, putative; PFAM: Molybdopterin binding; SPTR: Molybdenum cofactor biosynthesis protein, putative; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain.


ensembl_gene_id: Sgly_3077
symbol: moaC
gene_biotype: protein_coding
description:
  GTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: Sgly_3078
symbol: moaA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: Sgly_3079
symbol: Sgly_3079
gene_biotype: protein_coding
description:
  Molybdopterin binding domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Sgly_3080
symbol: Sgly_3080
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Sgly_3081
symbol: Sgly_3081
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase, HD region; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; KEGG: pfo:Pfl01_2133 metal dependent phosphohydrolase, HD region; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_3082
symbol: Sgly_3082
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: cce:Ccel_1392 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: Phenylacetate--CoA ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Sgly_3083
symbol: Sgly_3083
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: cce:Ccel_1390 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: Indolepyruvate ferredoxin oxidoreductase; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.


ensembl_gene_id: Sgly_3085
symbol: Sgly_3085
gene_biotype: protein_coding
description:
  COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: pth:PTH_1659 ABC-type cobalt transport system, permease component CbiQ and related transporters; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; PFAM: Cobalt transport protein.


ensembl_gene_id: Sgly_3086
symbol: Sgly_3086
gene_biotype: protein_coding
description:
  COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: pth:PTH_1658 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Sgly_3087
symbol: Sgly_3087
gene_biotype: protein_coding
description:
  COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: apv:Apar_0681 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal.


ensembl_gene_id: Sgly_3089
symbol: Sgly_3089
gene_biotype: protein_coding
description:
  COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: dhd:Dhaf_3291 glycerate kinase; PFAM: Glycerate kinase; PRIAM: Glycerate kinase; SPTR: Putative uncharacterized protein; TIGRFAM: Glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: Sgly_3090
symbol: Sgly_3090
gene_biotype: protein_coding
description:
  Tartronate semialdehyde reductase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115: IPR006398; KEGG: dhd:Dhaf_1173 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: 2-hydroxy-3-oxopropionate reductase; SPTR: 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; 2-hydroxy-3-oxopropionate reductase.


ensembl_gene_id: Sgly_3091
symbol: Sgly_3091
gene_biotype: protein_coding
description:
  COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: bge:BC1002_1353 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Hydroxypyruvate isomerase; SPTR: Hydroxypyruvate isomerase; PFAM: Xylose isomerase-like TIM barrel; Belongs to the hyi family.


ensembl_gene_id: Sgly_3092
symbol: Sgly_3092
gene_biotype: protein_coding
description:
  Acetolactate synthase; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001: IPR012000: IPR011766; KEGG: dhd:Dhaf_1175 acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate  [...]


ensembl_gene_id: Sgly_3093
symbol: Sgly_3093
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: adg:Adeg_1465 alpha-ribazole phosphatase; PFAM: Histidine phosphatase superfamily, clade-1; SPTR: Alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase family.


ensembl_gene_id: Sgly_3094
symbol: Sgly_3094
gene_biotype: protein_coding
description:
  Drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR004638; KEGG: tjr:TherJR_0520 drug resistance transporter, EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Sgly_3096
symbol: Sgly_3096
gene_biotype: protein_coding
description:
  COGs: COG5632 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002502; KEGG: dhd:Dhaf_0822 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: Putative uncharacterized protein; PFAM: N-acetylmuramoyl-L-alanine amidase.


ensembl_gene_id: Sgly_3097
symbol: Sgly_3097
gene_biotype: protein_coding
description:
  COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814: IPR001781; KEGG: hmo:HM1_1872 formylmethanofuran dehydrogenase, subunit E; PFAM: Formylmethanofuran dehydrogenase, subunit E domain; Zinc finger, LIM-type; SPTR: Formylmethanofuran dehydrogenase, subunit e; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon.


ensembl_gene_id: Sgly_3098
symbol: Sgly_3098
gene_biotype: protein_coding
description:
  Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: clj:CLJU_c38000 putative metal ion (Fe 3+) ABC transporter ATPase; PFAM: Periplasmic binding protein; SPTR: Predicted metal ion (Fe 3+) ABC transporter, ATPase component; PFAM: Periplasmic binding protein.


ensembl_gene_id: Sgly_3099
symbol: Sgly_3099
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: clj:CLJU_c38030 putative iron ABC transporter ATPase; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Predicted iron ABC transporter, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Sgly_3100
symbol: Sgly_3100
gene_biotype: protein_coding
description:
  COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: clj:CLJU_c38040 putative iron ABC transporter permease; PFAM: Bacterial transport system permease protein; SPTR: Predicted iron ABC transporter, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Sgly_3101
symbol: Sgly_3101
gene_biotype: protein_coding
description:
  Uncharacterized protein family UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: tit:Thit_1670 protein of unknown function UPF0066; PFAM: Uncharacterised protein family UPF0066; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0066; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: probable methyltransferase, YaeB/AF_0241 family.


ensembl_gene_id: Sgly_3102
symbol: Sgly_3102
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; COGs: COG1124 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dsy:DSY4092 hypothetical protein; PFAM: ABC transporter-like; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_3103
symbol: Sgly_3103
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR013563: IPR003593: IPR010066; KEGG: dhd:Dhaf_1863 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-te [...]


ensembl_gene_id: Sgly_3105
symbol: Sgly_3105
gene_biotype: protein_coding
description:
  Protein of unknown function DUF939; COGs: COG4129 membrane protein; KEGG: dhd:Dhaf_2854 protein of unknown function DUF939; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF939).


ensembl_gene_id: Sgly_3106
symbol: Sgly_3106
gene_biotype: protein_coding
description:
  SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: cce:Ccel_0665 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein.


ensembl_gene_id: Sgly_3107
symbol: Sgly_3107
gene_biotype: protein_coding
description:
  Na+/Picotransporter; COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841; KEGG: mta:Moth_1817 Na/Pi cotransporter II-related; PFAM: Na/Pi-cotransporter; SPTR: Na/Pi cotransporter II-related; PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter.


ensembl_gene_id: Sgly_3108
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Sgly_3109
symbol: Sgly_3109
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein QueD; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: tit:Thit_2036 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: Putative uncharacterized protein; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein.


ensembl_gene_id: Sgly_3110
symbol: queC
gene_biotype: protein_coding
description:
  exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: Sgly_3111
symbol: Sgly_3111
gene_biotype: protein_coding
description:
  COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013: IPR010140; KEGG: hmo:HM1_1034 histidinol-phosphatase; PFAM: PHP, C-terminal; PRIAM: Histidinol-phosphatase; SPTR: Histidinol phosphate phosphatase, hisj family, putative; TIGRFAM: Histidinol phosphate phosphatase, HisJ; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: Sgly_3112
symbol: Sgly_3112
gene_biotype: protein_coding
description:
  COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878: IPR003754: IPR006366; KEGG: dsy:DSY2224 hypothetical protein; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; PRIAM: Uroporphyrinogen-III C-methyltransferase., Uroporphyrinogen-III synthase; SPTR: Putative uncharacterized protein; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.


ensembl_gene_id: Sgly_3113
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Sgly_3163
symbol: Sgly_3163
gene_biotype: protein_coding
description:
  COGs: COG2206 HD-GYP domain; InterPro IPR001789: IPR006674: IPR003607; KEGG: cth:Cthe_0725 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; Metal-dependent phosphohydrolase, HD domain; SPTR: Response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Domain of unknown function (DUF3369); HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Sgly_3164
symbol: Sgly_3164
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cce:Ccel_2145 histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box.


ensembl_gene_id: Sgly_3165
symbol: Sgly_3165
gene_biotype: protein_coding
description:
  Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242: IPR000873: IPR006163: IPR013120: IPR 010071: IPR010080; KEGG: bcg:BCG9842_B4376 linear gramicidin synthetase subunit D; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Male sterility, NAD-binding; PRIAM: Phenylalanine racemase (ATP-hydrolyzing); SPTR: Amino acid adenylation domain protein; TIGRFAM: Amino acid adenylation; Thioester reductase; PFAM: Male sterility protein; Phosphopantetheine attachment site; AMP-bi [...]


ensembl_gene_id: Sgly_3166
symbol: Sgly_3166
gene_biotype: protein_coding
description:
  Protein of unknown function DUF307; InterPro IPR005185; KEGG: rca:Rcas_2965 hypothetical protein; PFAM: Protein of unknown function DUF307; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF307).


ensembl_gene_id: Sgly_3167
symbol: Sgly_3167
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase (quinone); COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: rci:RRC291 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; PRIAM: NAD(P)H dehydrogenase (quinone); SPTR: NADPH dehydrogenase quinone:NADPH dependent FMN reductase; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Sgly_3168
symbol: Sgly_3168
gene_biotype: protein_coding
description:
  COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: dhd:Dhaf_0384 UspA domain protein; PFAM: UspA; SPTR: Putative uncharacterized protein; PFAM: Universal stress protein family.


ensembl_gene_id: Sgly_3169
symbol: mqnD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: Sgly_3170
symbol: mqnB
gene_biotype: protein_coding
description:
  Futalosine nucleosidase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Sgly_3171
symbol: Sgly_3171
gene_biotype: protein_coding
description:
  KEGG: lpp:lpp0028 hypothetical protein; SPTR:2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquino lhydroxylase; PFAM: Ubiquinone biosynthesis protein COQ7.


ensembl_gene_id: Sgly_3172
symbol: Sgly_3172
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660: IPR003661: IPR003594; KEGG: tjr:TherJR_2683 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B- [...]


ensembl_gene_id: Sgly_3173
symbol: Sgly_3173
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: tjr:TherJR_2684 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcripti [...]


ensembl_gene_id: Sgly_3175
symbol: Sgly_3175
gene_biotype: protein_coding
description:
  InterPro IPR011437; KEGG: cce:Ccel_2311 protein of unknown function DUF1540; PFAM: Protein of unknown function DUF1540; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1540).


ensembl_gene_id: Sgly_3176
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: Sgly_3177
symbol: Sgly_3177
gene_biotype: protein_coding
description:
  COGs: COG1982 Arginine/lysine/ornithine decarboxylase; InterPro IPR000310: IPR008286; KEGG: dsy:DSY0236 hypothetical protein; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, C-terminal; PRIAM: Arginine decarboxylase; SPTR: Putative uncharacterized protein; PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain.


ensembl_gene_id: Sgly_3178
symbol: Sgly_3178
gene_biotype: protein_coding
description:
  COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183: IPR005730; KEGG: bha:BH3958 carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Putative uncharacterized protein; TIGRFAM: Carboxynorspermidine decarboxylase; manually curated; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase.


ensembl_gene_id: Sgly_3179
symbol: Sgly_3179
gene_biotype: protein_coding
description:
  COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: bha:BH3957 hypothetical protein; PFAM: Saccharopine dehydrogenase / Homospermidine synthase; SPTR: Saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase.


ensembl_gene_id: Sgly_3180
symbol: Sgly_3180
gene_biotype: protein_coding
description:
  Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: dhd:Dhaf_4289 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Hrd4-2; PFAM: GDSL-like Lipase/Acylhydrolase.


ensembl_gene_id: Sgly_3183
symbol: Sgly_3183
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674: IPR003607: IPR006675; KEGG: dhd:Dhaf_0175 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative uncharacterized protein; TIGRFAM: HDIG; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Sgly_3184
symbol: Sgly_3184
gene_biotype: protein_coding
description:
  Integrase family protein; InterPro IPR002104; KEGG: dhd:Dhaf_0174 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family.


ensembl_gene_id: Sgly_3186
symbol: Sgly_3186
gene_biotype: protein_coding
description:
  COGs: COG3585 Molybdopterin-binding protein; InterPro IPR005116: IPR004606; KEGG: aap:NT05HA_0786 hypothetical protein; PFAM: Transport-associated OB, type 1; SPTR: Molybdopterin-binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain.


ensembl_gene_id: Sgly_3187
symbol: Sgly_3187
gene_biotype: protein_coding
description:
  Chloride peroxidase; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: ctc:CTC01150 non-heme chloroperoxidase; PFAM: Alpha/beta hydrolase fold-1; PRIAM: Chloride peroxidase; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold.


ensembl_gene_id: Sgly_3188
symbol: Sgly_3188
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674: IPR003607; KEGG: cac:CA_C3650 HD-GYP domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: HD domain protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Sgly_3189
symbol: Sgly_3189
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: cbi:CLJ_B0515 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_3191
symbol: Sgly_3191
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: ccb:Clocel_1618 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP.


ensembl_gene_id: Sgly_3192
symbol: Sgly_3192
gene_biotype: protein_coding
description:
  COGs: COG2378 transcriptional regulator protein; KEGG: cpy:Cphy_2042 helix-turn-helix type 11 domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: HTH domain.


ensembl_gene_id: Sgly_3193
symbol: Sgly_3193
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: cpy:Cphy_2115 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.


ensembl_gene_id: Sgly_3194
symbol: Sgly_3194
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006675; KEGG: cce:Ccel_3184 metal dependent phophohydrolase; SPTR: Metal dependent phophohydrolase; TIGRFAM: HDIG; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Sgly_3196
symbol: Sgly_3196
gene_biotype: protein_coding
description:
  SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: cce:Ccel_1169 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein.


ensembl_gene_id: Sgly_3198
symbol: Sgly_3198
gene_biotype: protein_coding
description:
  Integral membrane protein, YjbE family; COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: gtn:GTNG_0523 hypothetical protein; PFAM: Integral membrane protein TerC; SPTR: Integral membrane protein TerC; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family.


ensembl_gene_id: Sgly_3199
symbol: Sgly_3199
gene_biotype: protein_coding
description:
  KEGG: gym:GYMC10_1090 Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_3201
symbol: Sgly_3201
gene_biotype: protein_coding
description:
  HNH nuclease; InterPro IPR003615; KEGG: cbb:CLD_2270 hypothetical protein; SMART: HNH nuclease; SPTR: Putative uncharacterized protein; PFAM: HNH endonuclease.


ensembl_gene_id: Sgly_3203
symbol: Sgly_3203
gene_biotype: protein_coding
description:
  InterPro IPR010235; KEGG: dhd:Dhaf_0348 nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; SPTR: Nucleotidyltransferase substrate binding protein, HI0074 family; TIGRFAM: Nucleotidyltransferase substrate binding protein, HI0074; PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family.


ensembl_gene_id: Sgly_3206
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Sgly_3207
symbol: Sgly_3207
gene_biotype: protein_coding
description:
  COGs: COG1647 Esterase/lipase; KEGG: nth:Nther_2012 putative esterase/lipase; SPTR: Carboxylesterase; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal.


ensembl_gene_id: Sgly_3208
symbol: Sgly_3208
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tte:TTE0594 SAM-dependent methyltransferase; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferases; PFAM: Methyltransferase domain.


ensembl_gene_id: Sgly_3209
symbol: hppA
gene_biotype: protein_coding
description:
  Pyrophosphate-energized proton pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: Sgly_3210
symbol: Sgly_3210
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Sgly_3211
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: Sgly_3212
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: Sgly_3213
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Sgly_3214
symbol: pgk
gene_biotype: protein_coding
description:
  COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: dhd:Dhaf_4718 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: Sgly_3215
symbol: Sgly_3215
gene_biotype: protein_coding
description:
  Na+/Picotransporter; COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841; KEGG: mta:Moth_1817 Na/Pi cotransporter II-related; PFAM: Na/Pi-cotransporter; SPTR: Na/Pi cotransporter II-related; PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter.


ensembl_gene_id: Sgly_3217
symbol: Sgly_3217
gene_biotype: protein_coding
description:
  Uncharacterized protein family UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: Sgly_3219
symbol: Sgly_3219
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; KEGG: dsy:DSY4846 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_3220
symbol: Sgly_3220
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158: IPR007197: IPR006638; KEGG: dsy:DSY4847 hypothetical protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily; B12 binding domain.


ensembl_gene_id: Sgly_3221
symbol: Sgly_3221
gene_biotype: protein_coding
description:
  COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200: IPR000150: IPR006379; KEGG: dsy:DSY4852 hypothetical protein; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: Putative uncharacterized protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; Sucrose-phosphate phosphatase subfamily; HAD-superfamily hydrolase, subfamily IIB; sucrose-phosphate phosphatase-like hydrolase, Archaeal.


ensembl_gene_id: Sgly_3222
symbol: Sgly_3222
gene_biotype: protein_coding
description:
  COGs: COG3409 Putative peptidoglycan-binding domain-containing protein; InterPro IPR002477; KEGG: dsy:DSY1780 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR: Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain.


ensembl_gene_id: Sgly_3223
symbol: Sgly_3223
gene_biotype: protein_coding
description:
  Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR003251: IPR004039; KEGG: tjr:TherJR_1577 rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubrerythrin; PFAM: Rubrerythrin.


ensembl_gene_id: Sgly_3224
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: Sgly_3225
symbol: speD
gene_biotype: protein_coding
description:
  Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: Sgly_3227
symbol: Sgly_3227
gene_biotype: protein_coding
description:
  Acetyltransferase, GNAT family; InterPro IPR000182; KEGG: dae:Dtox_2879 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_3228
symbol: Sgly_3228
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR000086; KEGG: ant:Arnit_2388 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.


ensembl_gene_id: Sgly_3229
symbol: Sgly_3229
gene_biotype: protein_coding
description:
  COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: dsy:DSY3038 hypothetical protein; PFAM: Citrate lyase, alpha subunit; PRIAM: Citrate CoA-transferase; SPTR: Putative uncharacterized protein; TIGRFAM: Citrate lyase, alpha subunit; manually curated; PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit.


ensembl_gene_id: Sgly_3230
symbol: Sgly_3230
gene_biotype: protein_coding
description:
  COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000; KEGG: clj:CLJU_c40570 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; PRIAM: Citryl-CoA lyase; SPTR: Citrate lyase beta chain; PFAM: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: Sgly_3234
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: Sgly_3235
symbol: Sgly_3235
gene_biotype: protein_coding
description:
  Protein of unknown function DUF218; COGs: COG2949 Uncharacterized membrane protein; InterPro IPR003848; KEGG: dae:Dtox_0889 protein of unknown function DUF218; PFAM: Protein of unknown function DUF218; SPTR: Putative uncharacterized protein; PFAM: DUF218 domain.


ensembl_gene_id: Sgly_3237
symbol: Sgly_3237
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nth:Nther_0344 nitrogen regulatory protein P-II; SPTR: PII family protein.


ensembl_gene_id: Sgly_3238
symbol: Sgly_3238
gene_biotype: protein_coding
description:
  Possible tyrosine transporter P-protein; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: bca:BCE_5050 arsenical pump family protein; PFAM: Divalent ion symporter; SPTR: Citrate transporter; PFAM: Citrate transporter; (TC 2.A.45.2.1.


ensembl_gene_id: Sgly_3240
symbol: Sgly_3240
gene_biotype: protein_coding
description:
  COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: dsy:DSY2041 hypothetical protein; PFAM: Transcription factor CarD; SPTR: Putative uncharacterized protein; PFAM: CarD-like/TRCF domain.


ensembl_gene_id: Sgly_3243
symbol: Sgly_3243
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: Sgly_3244
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Sgly_3245
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: Sgly_3247
symbol: Sgly_3247
gene_biotype: protein_coding
description:
  C-terminal processing peptidase-3; COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: dhd:Dhaf_4739 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxyl-terminal protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.


ensembl_gene_id: Sgly_3248
symbol: Sgly_3248
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: dhd:Dhaf_4740 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23.


ensembl_gene_id: Sgly_3249
symbol: Sgly_3249
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Sgly_3250
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: Sgly_3251
symbol: Sgly_3251
gene_biotype: protein_coding
description:
  COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475: IPR005476; KEGG: dhd:Dhaf_4744 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SPTR: Transketolase central region; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.


ensembl_gene_id: Sgly_3252
symbol: Sgly_3252
gene_biotype: protein_coding
description:
  COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: dhd:Dhaf_4745 transketolase domain protein; PFAM: Transketolase, N-terminal; PRIAM: Transketolase; SPTR: Transketolase domain protein; PFAM: Transketolase, thiamine diphosphate binding domain.


ensembl_gene_id: Sgly_3253
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Sgly_3254
symbol: Sgly_3254
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR007253; KEGG: dhd:Dhaf_4160 putative cell wall binding repeat 2-containing protein; PFAM: Putative cell wall binding repeat 2; SPTR: Putative cell wall binding repeat 2-containing protein; PFAM: Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_3256
symbol: Sgly_3256
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR007253; KEGG: dhd:Dhaf_1937 putative cell wall binding repeat 2-containing protein; PFAM: Putative cell wall binding repeat 2; SPTR: Putative uncharacterized protein; PFAM: Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_3257
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: Sgly_3258
symbol: hpf
gene_biotype: protein_coding
description:
  SSU ribosomal protein S30P;sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: Sgly_3259
symbol: Sgly_3259
gene_biotype: protein_coding
description:
  COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: dhd:Dhaf_4754 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.


ensembl_gene_id: Sgly_3260
symbol: Sgly_3260
gene_biotype: protein_coding
description:
  Helicase domain protein; COGs: COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); InterPro IPR006935: IPR001650: IPR014001; KEGG: dhd:Dhaf_4755 helicase domain protein; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.


ensembl_gene_id: Sgly_3262
symbol: Sgly_3262
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sth:STH2700 O-antigen biosynthesis-related protein; SPTR: O-antigen biosynthesis-related protein.


ensembl_gene_id: Sgly_3263
symbol: Sgly_3263
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dhd:Dhaf_4759 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Sgly_3264
symbol: Sgly_3264
gene_biotype: protein_coding
description:
  Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: Sgly_3265
symbol: Sgly_3265
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: dhd:Dhaf_4763 rod shape-determining protein Mbl; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Putative uncharacterized protein; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.


ensembl_gene_id: Sgly_3266
symbol: Sgly_3266
gene_biotype: protein_coding
description:
  Sporulation transcriptional regulator SpoIIID; InterPro IPR014208; KEGG: dsy:DSY4887 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Sporulation stage III, transcriptional regulator SpoIIID; PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID.


ensembl_gene_id: Sgly_3267
symbol: Sgly_3267
gene_biotype: protein_coding
description:
  COGs: COG2385 Sporulation protein and related protein; InterPro IPR013693: IPR014225: IPR013486; KEGG: dsy:DSY4908 hypothetical protein; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Sporulation stage II, protein D firmicutes; Sporulation stage II protein D, amidase enhancer LytB; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D.


ensembl_gene_id: Sgly_3270
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Sgly_3271
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Sgly_3272
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Sgly_3273
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Sgly_3274
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Sgly_3275
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Sgly_3276
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Sgly_3277
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: Sgly_3279
symbol: Sgly_3279
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_4799 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative F0F1-ATPase subunit (ATPase_gene1).


ensembl_gene_id: Sgly_3280
symbol: Sgly_3280
gene_biotype: protein_coding
description:
  COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: dhd:Dhaf_4822 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: Sgly_3281
symbol: Sgly_3281
gene_biotype: protein_coding
description:
  CMP/dCMP deaminase zinc-binding protein; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: dbr:Deba_2384 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: CMP/dCMP deaminase zinc-binding; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.


ensembl_gene_id: Sgly_3282
symbol: Sgly_3282
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_1009 hemerythrin HHE cation binding domain protein; SPTR: Hemerythrin HHE cation binding domain protein.


ensembl_gene_id: Sgly_3283
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Sgly_3284
symbol: Sgly_3284
gene_biotype: protein_coding
description:
  COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500: IPR004785; KEGG: dsy:DSY4929 hypothetical protein; PFAM: Ribose/galactose isomerase; PRIAM: Galactose-6-phosphate isomerase; SPTR: Putative uncharacterized protein; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.


ensembl_gene_id: Sgly_3285
symbol: Sgly_3285
gene_biotype: protein_coding
description:
  COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: dhd:Dhaf_4829 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.


ensembl_gene_id: Sgly_3287
symbol: Sgly_3287
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: Sgly_3288
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Sgly_3289
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Sgly_3290
symbol: Sgly_3290
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1385; COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: dae:Dtox_0063 protein of unknown function DUF1385; PFAM: Protein of unknown function DUF1385; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1385).


ensembl_gene_id: Sgly_3292
symbol: Sgly_3292
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase, class II; COGs: COG1494 Fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein; InterPro IPR004464; KEGG: dhd:Dhaf_4837 fructose 1,6-bisphosphatase II; PFAM: GlpX; PRIAM: Fructose-bisphosphatase; SPTR: Putative uncharacterized protein; TIGRFAM: GlpX; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II.


ensembl_gene_id: Sgly_3293
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: Sgly_3294
symbol: Sgly_3294
gene_biotype: protein_coding
description:
  COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771: IPR011289; KEGG: dhd:Dhaf_4839 fructose-1,6-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; PRIAM: Tagatose-bisphosphate aldolase; SPTR: Fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: Fructose-1,6-bisphosphate aldolase, class II; Ketose-bisphosphate aldolase, class-II; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist.


ensembl_gene_id: Sgly_3296
symbol: Sgly_3296
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: dsy:DSY4941 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Sgly_3298
symbol: Sgly_3298
gene_biotype: protein_coding
description:
  Methicillin resistance protein; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: dhd:Dhaf_4843 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Methicillin resistance protein; PFAM: FemAB family.


ensembl_gene_id: Sgly_3299
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Sgly_3300
symbol: argS
gene_biotype: protein_coding
description:
  COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR005148: IPR015945: IPR008909: IPR001278; KEGG: dhd:Dhaf_4846 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase.


ensembl_gene_id: Sgly_3303
symbol: Sgly_3303
gene_biotype: protein_coding
description:
  Alanine--glyoxylate transaminase; COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192; KEGG: dhd:Dhaf_4850 alanine--glyoxylate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Alanine--glyoxylate transaminase; SPTR: Putative uncharacterized protein; PFAM: Aminotransferase class-V.


ensembl_gene_id: Sgly_3304
symbol: Sgly_3304
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2225; COGs: COG1655 conserved hypothetical protein; InterPro IPR018708: IPR019734; KEGG: afl:Aflv_2407 hypothetical protein; PFAM: Protein of unknown function DUF2225; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2225).


ensembl_gene_id: Sgly_3305
symbol: Sgly_3305
gene_biotype: protein_coding
description:
  rRNA (guanine-N(2)-)-methyltransferase; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114: IPR000241; KEGG: dsy:DSY2076 hypothetical protein; PFAM: Putative RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Putative uncharacterized protein; PFAM: Putative RNA methylase family UPF0020; THUMP domain; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Sgly_3306
symbol: Sgly_3306
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ade:Adeh_0776 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Response regulator receiver domain.


ensembl_gene_id: Sgly_3307
symbol: Sgly_3307
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ddf:DEFDS_0866 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Sgly_3308
symbol: Sgly_3308
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter/malic acid transport protein; COGs: COG1275 Tellurite resistance protein and related permease; InterPro IPR004695; KEGG: dhd:Dhaf_0897 C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; SPTR: C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein.


ensembl_gene_id: Sgly_3309
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Sgly_3310
symbol: larC
gene_biotype: protein_coding
description:
  UPF0272 protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: Sgly_3311
symbol: Sgly_3311
gene_biotype: protein_coding
description:
  Diguanylate cyclase and metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR013656: IPR000160: IPR006674: IPR000014; KEGG: pth:PTH_2004 hypothetical protein; PFAM: Diguanylate cyclase, predicted; PAS fold-4; Metal-dependent phosphohydrolase, HD subdomain; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Sgly_3312
symbol: Sgly_3312
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0016; COGs: COG2119 membrane protein; InterPro IPR001727; KEGG: hmo:HM1_0223 hypothetical membrane protein; PFAM: Uncharacterised protein family UPF0016; SPTR: Hypothetical membrane protein; PFAM: Uncharacterized protein family UPF0016.


ensembl_gene_id: Sgly_3313
symbol: Sgly_3313
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase (NADP(+)); COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149; KEGG: abu:Abu_1042 NADP-dependent alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; PRIAM: Alcohol dehydrogenase (NADP(+)); SPTR: Alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.


ensembl_gene_id: Sgly_3315
symbol: Sgly_3315
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524: IPR011663; KEGG: gct:GC56T3_1227 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.


ensembl_gene_id: Sgly_3316
symbol: rlmH
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Sgly_3317
symbol: Sgly_3317
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674: IPR003607: IPR006675; KEGG: dsy:DSY3225 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative uncharacterized protein; TIGRFAM: HDIG; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: Sgly_3318
symbol: Sgly_3318
gene_biotype: protein_coding
description:
  InterPro IPR001448; KEGG: cce:Ccel_1444 small acid-soluble spore protein alpha/beta type; PFAM: Small acid-soluble spore protein, alpha/beta-type; SPTR: Small acid-soluble spore protein alpha/beta type; PFAM: Small, acid-soluble spore proteins, alpha/beta type.


ensembl_gene_id: Sgly_3319
symbol: Sgly_3319
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG3580 conserved hypothetical protein; InterPro IPR002731: IPR018709: IPR008275; KEGG: cth:Cthe_1329 putative CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase, BadF/BadG/BcrA/BcrD type; SPTR: CoA-substrate-specific enzyme activase; TIGRFAM: CoA enzyme activase; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: Sgly_3320
symbol: Sgly_3320
gene_biotype: protein_coding
description:
  Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254: IPR001478; KEGG: dhd:Dhaf_4915 2-alkenal reductase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Putative uncharacterized protein; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF).


ensembl_gene_id: Sgly_3321
symbol: Sgly_3321
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: dsy:DSY5017 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Sgly_3322
symbol: Sgly_3322
gene_biotype: protein_coding
description:
  Trimethylamine-N-oxide reductase (cytochrome c); COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963: IPR006656: IPR006657; KEGG: dsy:DSY5019 putative anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Putative anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdop [...]


ensembl_gene_id: Sgly_3323
symbol: Sgly_3323
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197; KEGG: dhd:Dhaf_4919 radical SAM domain protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Sgly_3326
symbol: Sgly_3326
gene_biotype: protein_coding
description:
  COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cth:Cthe_1801 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit.


ensembl_gene_id: Sgly_3327
symbol: Sgly_3327
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, inner membrane subunit CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339: IPR012809; KEGG: cth:Cthe_1802 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; SPTR: Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.


ensembl_gene_id: Sgly_3328
symbol: Sgly_3328
gene_biotype: protein_coding
description:
  Cobalamin (vitamin B12) biosynthesis CbiM protein; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: cbt:CLH_1576 cobalamin; PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; SPTR: Cobalamin; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.


ensembl_gene_id: Sgly_3329
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: Sgly_3330
symbol: Sgly_3330
gene_biotype: protein_coding
description:
  Prenyltransferase/squalene oxidase; InterPro IPR001330; KEGG: dhd:Dhaf_4682 hypothetical protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_3331
symbol: Sgly_3331
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dhd:Dhaf_2171 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_3333
symbol: Sgly_3333
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: amt:Amet_4202 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulato [...]


ensembl_gene_id: Sgly_3334
symbol: Sgly_3334
gene_biotype: protein_coding
description:
  COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712: IPR003594; KEGG: amt:Amet_4203 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Sgly_3335
symbol: Sgly_3335
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bca:BCE_3442 glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Sgly_3337
symbol: Sgly_3337
gene_biotype: protein_coding
description:
  ABC-2 type transporter; InterPro IPR013525; KEGG: cno:NT01CX_1312 ABC transporter, permease protein, putative; PFAM: ABC-2 type transporter; SPTR: ABC transporter, permease protein, putative; PFAM: ABC-2 type transporter.


ensembl_gene_id: Sgly_3339
symbol: Sgly_3339
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: amt:Amet_4206 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_3340
symbol: Sgly_3340
gene_biotype: protein_coding
description:
  KEGG: maq:Maqu_2925 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Sgly_3342
symbol: Sgly_3342
gene_biotype: protein_coding
description:
  COGs: COG0772 Bacterial cell division membrane protein; KEGG: dhd:Dhaf_0962 cell division membrane protein-like protein; SPTR: Cell division membrane protein-like protein; PFAM: Cell cycle protein; Belongs to the SEDS family.


ensembl_gene_id: Sgly_3343
symbol: Sgly_3343
gene_biotype: protein_coding
description:
  Transcriptional regulator, PadR family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: dsy:DSY4371 hypothetical protein; PFAM: Transcription regulator PadR N-terminal-like; SPTR: Putative uncharacterized protein; PFAM: Transcriptional regulator PadR-like family.


ensembl_gene_id: Sgly_3344
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Sgly_3345
symbol: Sgly_3345
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: Sgly_3346
symbol: Sgly_3346
gene_biotype: protein_coding
description:
  Sigma 54 interacting domain protein; COGs: COG1067 ATP-dependent protease; InterPro IPR003959: IPR003593: IPR014252; KEGG: dhd:Dhaf_4930 sigma 54 interacting domain protein; PFAM: ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: ATPase, AAA+ type, core; SPTR: Sigma 54 interacting domain protein; TIGRFAM: Sporulation protease LonC; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease, Lon family.


ensembl_gene_id: Sgly_3348
symbol: Sgly_3348
gene_biotype: protein_coding
description:
  InterPro IPR018710; KEGG: dhd:Dhaf_4932 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2232).


ensembl_gene_id: Sgly_3350
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Sgly_3351
symbol: Sgly_3351
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: Sgly_3353
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Sgly_3354
symbol: Sgly_3354
gene_biotype: protein_coding
description:
  Protein of unknown function DUF951; COGs: COG4481 conserved hypothetical protein; InterPro IPR009296; KEGG: dhd:Dhaf_4938 protein of unknown function DUF951; PFAM: Protein of unknown function DUF951, bacterial; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF951).


ensembl_gene_id: Sgly_3355
symbol: Sgly_3355
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_4939 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Colicin V production protein.


ensembl_gene_id: Sgly_3356
symbol: Sgly_3356
gene_biotype: protein_coding
description:
  Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein); PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.


ensembl_gene_id: Sgly_3357
symbol: Sgly_3357
gene_biotype: protein_coding
description:
  KEGG: vpr:Vpar_0344 hypothetical protein; SPTR: Hypothetical cytosolic protein; PFAM: Protein of unknown function (DUF3343).


ensembl_gene_id: Sgly_3358
symbol: Sgly_3358
gene_biotype: protein_coding
description:
  Cysteine desulfurase family protein; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192: IPR010969; KEGG: vpr:Vpar_0342 cysteine desulfurase family protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase family protein; TIGRFAM: Cysteine desulfurase-related, unknown function; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein.


ensembl_gene_id: Sgly_3359
symbol: Sgly_3359
gene_biotype: protein_coding
description:
  Sporulation protein YyaC; InterPro IPR009665; KEGG: dhd:Dhaf_4946 sporulation protein YyaC; PFAM: Protein of unknown function DUF1256; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF1256; PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC.


ensembl_gene_id: Sgly_3361
symbol: Sgly_3361
gene_biotype: protein_coding
description:
  Chromosome segregation DNA-binding protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; KEGG: dhd:Dhaf_4953 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: ParB-like partition protein; TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.


ensembl_gene_id: Sgly_3362
symbol: Sgly_3362
gene_biotype: protein_coding
description:
  COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: dsy:DSY5052 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Sgly_3363
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: Sgly_3364
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Sgly_3365
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Sgly_3366
symbol: Sgly_3366
gene_biotype: protein_coding
description:
  COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: dhd:Dhaf_4958 single-stranded nucleic acid binding R3H domain protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; SPTR: Putative uncharacterized protein; PFAM: R3H domain.


ensembl_gene_id: Sgly_3367
symbol: Sgly_3367
gene_biotype: protein_coding
description:
  Membrane protein insertase, YidC/Oxa1 family; COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708: IPR020001; KEGG: dhd:Dhaf_4959 60 kDa inner membrane insertion protein; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Putative uncharacterized protein; TIGRFAM: Membrane insertion protein, OxaA/YidC, core; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain.


ensembl_gene_id: Sgly_3368
symbol: Sgly_3368
gene_biotype: protein_coding
description:
  UPF0161 protein yidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Sgly_3369
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Sgly_3370
symbol: rpmH
gene_biotype: protein_coding
description:
  HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: drm:Dred_3329 50S ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; manually curated; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: Sgly_R0066
symbol: ADY57468.1
gene_biotype: protein_coding
description:
  InterPro IPR002934; KEGG: dhd:Dhaf_0347 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region; tmRNA as predicted by Rfam (RF00023), score 182.33; PFAM: Nucleotidyltransferase domain.


