# geneInfo

ensembl_gene_id: Sgly_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Sgly_0002
symbol: Sgly_0002
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: Sgly_0003
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: Sgly_0004
symbol: Sgly_0004
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_0004 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF370).


ensembl_gene_id: Sgly_0005
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Sgly_0006
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Sgly_0007
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: Sgly_0008
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: Sgly_0009
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Sgly_0010
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Sgly_0013
symbol: Sgly_0013
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COGs: COG4186 phosphoesterase or phosphohydrolase; InterPro IPR004843; KEGG: shi:Shel_05520 predicted phosphoesterase or phosphohydrolase; PFAM: Metallophosphoesterase; SPTR: Predicted phosphoesterase or phosphohydrolase.


ensembl_gene_id: Sgly_0016
symbol: Sgly_0016
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: dsy:DSY0010 hypothetical protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Sgly_0017
symbol: Sgly_0017
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cth:Cthe_0513 DNA binding domain-containing protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0018
symbol: Sgly_0018
gene_biotype: protein_coding
description:
  Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: Sgly_0019
symbol: Sgly_0019
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_2435 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4.


ensembl_gene_id: Sgly_0021
symbol: Sgly_0021
gene_biotype: protein_coding
description:
  Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: Sgly_0022
symbol: Sgly_0022
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cbb:CLD_3577 putative signal peptidase; SPTR: Putative signal peptidase; PFAM: Signal peptidase (SPase) II.


ensembl_gene_id: Sgly_0023
symbol: Sgly_0023
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR008250: IPR005834: IPR006404: IPR006416: IPR 001757; KEGG: cce:Ccel_0234 cadmium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: Cadmium-exporting ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy  [...]


ensembl_gene_id: Sgly_0024
symbol: Sgly_0024
gene_biotype: protein_coding
description:
  Heavy metal transport/detoxification protein; InterPro IPR006121; KEGG: fma:FMG_0054 putative cation-transporting P-type ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: Cadmium-exporting ATPase; PFAM: Heavy-metal-associated domain.


ensembl_gene_id: Sgly_0025
symbol: Sgly_0025
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: cpy:Cphy_2129 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Cadmium efflux system accessory protein; PFAM: Bacterial regulatory protein, arsR family.


ensembl_gene_id: Sgly_0026
symbol: Sgly_0026
gene_biotype: protein_coding
description:
  COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: dsy:DSY4671 hypothetical protein; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.


ensembl_gene_id: Sgly_0027
symbol: Sgly_0027
gene_biotype: protein_coding
description:
  Arsenite efflux ATP-binding protein ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003348; KEGG: dsy:DSY4598 hypothetical protein; PRIAM: Arsenite-transporting ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: ATPase, anion-transporting; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA); (TC 3.A.4.1.1.


ensembl_gene_id: Sgly_0030
symbol: Sgly_0030
gene_biotype: protein_coding
description:
  Arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657: IPR004706; KEGG: dsy:DSY4672 hypothetical protein; PFAM: Bile acid:sodium symporter; SPTR: Arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein.


ensembl_gene_id: Sgly_0031
symbol: Sgly_0031
gene_biotype: protein_coding
description:
  KEGG: chy:CHY_1710 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2703).


ensembl_gene_id: Sgly_0032
symbol: Sgly_0032
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: ccb:Clocel_0243 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.


ensembl_gene_id: Sgly_0033
symbol: Sgly_0033
gene_biotype: protein_coding
description:
  KEGG: dsy:DSY0027 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: IclR helix-turn-helix domain.


ensembl_gene_id: Sgly_0034
symbol: Sgly_0034
gene_biotype: protein_coding
description:
  TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: dsy:DSY0028 hypothetical protein; PFAM: Ti-type conjugative transfer system, TraG-like; SPTR: Putative uncharacterized protein; PFAM: TraG/TraD family.


ensembl_gene_id: Sgly_0036
symbol: Sgly_0036
gene_biotype: protein_coding
description:
  Sel1 domain protein repeat-containing protein; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: dsy:DSY0030 hypothetical protein; PFAM: Sel1-like; SPTR: Putative uncharacterized protein; PFAM: Sel1 repeat.


ensembl_gene_id: Sgly_0040
symbol: Sgly_0040
gene_biotype: protein_coding
description:
  Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR000064: IPR016047; KEGG: dsy:DSY0034 hypothetical protein; PFAM: Peptidase M23; NLP/P60; SPTR: Putative uncharacterized protein; PFAM: NlpC/P60 family; Peptidase family M23.


ensembl_gene_id: Sgly_0041
symbol: Sgly_0041
gene_biotype: protein_coding
description:
  AIG2 family protein; InterPro IPR009288; KEGG: dsy:DSY0035 hypothetical protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; PFAM: AIG2-like family.


ensembl_gene_id: Sgly_0042
symbol: Sgly_0042
gene_biotype: protein_coding
description:
  KEGG: dsy:DSY0036 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative amidoligase enzyme.


ensembl_gene_id: Sgly_0044
symbol: Sgly_0044
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: dsy:DSY0038 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87.


ensembl_gene_id: Sgly_0047
symbol: Sgly_0047
gene_biotype: protein_coding
description:
  COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: dsy:DSY0044 hypothetical protein; PFAM: DNA methylase, C-5 cytosine-specific; SPTR: Cytosine-specific methyltransferase; PFAM: C-5 cytosine-specific DNA methylase.


ensembl_gene_id: Sgly_0048
symbol: Sgly_0048
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: rha:RHA1_ro08484 integrase/recombinase; PFAM: Integrase, catalytic core, phage; SPTR: Probable integrase/recombinase; PFAM: Phage integrase family.


ensembl_gene_id: Sgly_0049
symbol: Sgly_0049
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: dae:Dtox_1435 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family.


ensembl_gene_id: Sgly_0050
symbol: Sgly_0050
gene_biotype: protein_coding
description:
  Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: rha:RHA1_ro08486 integrase/recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: Sgly_0054
symbol: Sgly_0054
gene_biotype: protein_coding
description:
  KEGG: ptm:GSPATT00022950001 hypothetical protein; SPTR: Chromosome undetermined scaffold_76, whole genome shotgun sequence.


ensembl_gene_id: Sgly_0064
symbol: Sgly_0064
gene_biotype: protein_coding
description:
  COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis; InterPro IPR001482; KEGG: dsy:DSY0058 hypothetical protein; PFAM: Type II secretion system protein E; SPTR: Putative uncharacterized protein; PFAM: Type II/IV secretion system protein.


ensembl_gene_id: Sgly_0065
symbol: Sgly_0065
gene_biotype: protein_coding
description:
  KEGG: lmy:LM5923_1842 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Sgly_0066
symbol: Sgly_0066
gene_biotype: protein_coding
description:
  Flp pilus assembly protein CpaB; InterPro IPR013974: IPR017592; KEGG: dsy:DSY0060 hypothetical protein; PFAM: SAF domain; SPTR: Putative uncharacterized protein; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.


ensembl_gene_id: Sgly_0068
symbol: Sgly_0068
gene_biotype: protein_coding
description:
  Peptidase A24A prepilin type IV; InterPro IPR000045; KEGG: dsy:DSY0061 hypothetical protein; PFAM: Peptidase A24A, prepilin type IV; SPTR: Putative uncharacterized protein; PFAM: Type IV leader peptidase family.


ensembl_gene_id: Sgly_0070
symbol: Sgly_0070
gene_biotype: protein_coding
description:
  RNA-directed DNA polymerase (Reverse transcriptase); COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477: IPR000442; KEGG: ccb:Clocel_2353 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (reverse transcriptase); Intron maturase, type II; SPTR: Putative uncharacterized protein; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.


ensembl_gene_id: Sgly_0071
symbol: Sgly_0071
gene_biotype: protein_coding
description:
  S-layer domain-containing protein; InterPro IPR001119; KEGG: dsy:DSY0062 hypothetical protein; PFAM: S-layer homology domain; SPTR: Putative uncharacterized protein; PFAM: S-layer homology domain.


ensembl_gene_id: Sgly_0072
symbol: Sgly_0072
gene_biotype: protein_coding
description:
  SpoVG family protein; COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; InterPro IPR007170; KEGG: dsy:DSY0063 hypothetical protein; PFAM: Sporulation stage V, protein G; SPTR: Putative uncharacterized protein; PFAM: SpoVG; Belongs to the SpoVG family.


ensembl_gene_id: Sgly_0076
symbol: Sgly_0076
gene_biotype: protein_coding
description:
  D12 class N6 adenine-specific DNA methyltransferase; COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: dsy:DSY0067 hypothetical protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: Putative uncharacterized protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam).


ensembl_gene_id: Sgly_0084
symbol: Sgly_0084
gene_biotype: protein_coding
description:
  InterPro IPR010093; KEGG: cth:Cthe_0513 DNA binding domain-containing protein; SPTR: DNA binding domain, excisionase family; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Sgly_0085
symbol: Sgly_0085
gene_biotype: protein_coding
description:
  Filamentation induced by cAMP protein Fic; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: dhd:Dhaf_0086 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family.


ensembl_gene_id: Sgly_0086
symbol: Sgly_0086
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG3593 ATP-dependent endonuclease of the OLD family; KEGG: saw:SAHV_0411 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0087
symbol: Sgly_0087
gene_biotype: protein_coding
description:
  UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: smb:smi_1319 hypothetical protein; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein; PFAM: UvrD/REP helicase.


ensembl_gene_id: Sgly_0088
symbol: Sgly_0088
gene_biotype: protein_coding
description:
  KEGG: ecy:ECSE_0286 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2971).


ensembl_gene_id: Sgly_0089
symbol: Sgly_0089
gene_biotype: protein_coding
description:
  Pentapeptide repeat protein; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001: IPR006935: IPR001646; KEGG: mja:MJECL40 type I restriction enzyme subunit R; PFAM: Pentapeptide repeat; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; SPTR: Putative type-1 restriction enzyme MjaXP R protein; PFAM: Pentapeptide repeats (8 copies); Type III restriction enzyme, res subunit; NACHT domain.


ensembl_gene_id: Sgly_0090
symbol: Sgly_0090
gene_biotype: protein_coding
description:
  IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593: IPR002611; KEGG: dsy:DSY0836 hypothetical protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: IstB-like ATP binding protein.


ensembl_gene_id: Sgly_0091
symbol: Sgly_0091
gene_biotype: protein_coding
description:
  Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: bha:BH3965 transposase (22); PFAM: Integrase, catalytic core; SPTR: Integrase catalytic region; PFAM: Integrase core domain.


ensembl_gene_id: Sgly_0092
symbol: Sgly_0092
gene_biotype: protein_coding
description:
  InterPro IPR010093; KEGG: cth:Cthe_0513 DNA binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Sgly_0094
symbol: Sgly_0094
gene_biotype: protein_coding
description:
  Putative GTP-binding protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: dhd:Dhaf_0124 putative GTP-binding protein; SPTR: Putative GTP-binding protein.


ensembl_gene_id: Sgly_0095
symbol: Sgly_0095
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cpy:Cphy_1439 transposase IS4 family protein; SPTR: Transposase IS4 family protein.


ensembl_gene_id: Sgly_0096
symbol: Sgly_0096
gene_biotype: protein_coding
description:
  Transposase protein; InterPro IPR002514; KEGG: cth:Cthe_2772 transposase IS3/IS911; PFAM: Transposase IS3/IS911; SPTR: Transposase IS3/IS911; manually curated; PFAM: Integrase core domain; Transposase.


ensembl_gene_id: Sgly_0097
symbol: Sgly_0097
gene_biotype: protein_coding
description:
  Filamentation induced by cAMP protein Fic; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: dsy:DSY0147 hypothetical protein; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Putative uncharacterized protein; PFAM: Fic/DOC family.


ensembl_gene_id: Sgly_0099
symbol: Sgly_0099
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: aoe:Clos_2183 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_0101
symbol: Sgly_0101
gene_biotype: protein_coding
description:
  COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: bmq:BMQ_1731 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; PFAM: Beta-lactamase.


ensembl_gene_id: Sgly_0103
symbol: Sgly_0103
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: dhd:Dhaf_3330 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_0110
symbol: Sgly_0110
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ttm:Tthe_2284 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0112
symbol: Sgly_0112
gene_biotype: protein_coding
description:
  degV family protein; COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: dhd:Dhaf_0606 DegV family protein; PFAM: DegV; SPTR: DegV family protein; TIGRFAM: DegV; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family.


ensembl_gene_id: Sgly_0113
symbol: Sgly_0113
gene_biotype: protein_coding
description:
  InterPro IPR000182; KEGG: dhd:Dhaf_0960 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0115
symbol: Sgly_0115
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: Sgly_0116
symbol: Sgly_0116
gene_biotype: protein_coding
description:
  FeoA family protein; COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: cbt:CLH_2779 hypothetical protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: Putative uncharacterized protein; PFAM: FeoA domain.


ensembl_gene_id: Sgly_0117
symbol: Sgly_0117
gene_biotype: protein_coding
description:
  FeoA family protein; InterPro IPR007167; KEGG: dhd:Dhaf_3461 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: Putative uncharacterized protein; PFAM: FeoA domain.


ensembl_gene_id: Sgly_0118
symbol: Sgly_0118
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: abo:ABO_1262 GGDEF domain-containing protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: GGDEF domain protein; TIGRFAM: Diguanylate cyclase, predicted; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Sgly_0119
symbol: Sgly_0119
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR000160: IPR001633; KEGG: cdf:CD1476 putative signaling protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Sgly_0120
symbol: Sgly_0120
gene_biotype: protein_coding
description:
  Rubrerythrin; InterPro IPR003251; KEGG: mmx:MmarC6_1061 hypothetical protein; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein; PFAM: Rubrerythrin.


ensembl_gene_id: Sgly_0121
symbol: Sgly_0121
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR004010; KEGG: ttm:Tthe_2066 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_0122
symbol: Sgly_0122
gene_biotype: protein_coding
description:
  Resolvase domain protein; InterPro IPR006119; KEGG: bcz:pE33L54_0049 recombinase; PFAM: Resolvase, N-terminal; SPTR: Recombinase; PFAM: Resolvase, N terminal domain.


ensembl_gene_id: Sgly_0123
symbol: Sgly_0123
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: nde:NIDE4265 formate hydrogenlyase, membrane subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: Formate hydrogenlyase, membrane subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.


ensembl_gene_id: Sgly_0124
symbol: Sgly_0124
gene_biotype: protein_coding
description:
  Respiratory-chain NADH dehydrogenase subunit 1; COGs: COG0650 Formate hydrogenlyase subunit 4; InterPro IPR001694; KEGG: nde:NIDE4264 putative formate hydrogenlyase, membrane subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; SPTR: Similar to membrane-bound [NiFe]-hydrogenase-3, subunit D; PFAM: NADH dehydrogenase.


ensembl_gene_id: Sgly_0125
symbol: Sgly_0125
gene_biotype: protein_coding
description:
  Hydrogenase, membrane subunit 2-like protein; COGs: COG4237 Hydrogenase 4 membrane component (E); KEGG: rci:RCIX2385 hydrogenase, membrane subunit 2-like protein; SPTR: Hydrogenase, membrane subunit 2-like protein.


ensembl_gene_id: Sgly_0126
symbol: Sgly_0126
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: rci:RCIX2384 hydrogenase, membrane subunit 1-like protein (EchA-like); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: Hydrogenase, membrane subunit 1-like protein (EchA-like); PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.


ensembl_gene_id: Sgly_0127
symbol: Sgly_0127
gene_biotype: protein_coding
description:
  NADH dehydrogenase (ubiquinone) 30 kDa subunit; COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001268: IPR001501: IPR001135; KEGG: dae:Dtox_0795 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; Nickel-dependent hydrogenase, large subunit; NADH-quinone oxidoreductase, subunit D; SPTR: Similar to membrane-bound [NiFe]-hydrogenase-3, large subunit (Chain E); PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase.


ensembl_gene_id: Sgly_0128
symbol: Sgly_0128
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137; KEGG: cce:Ccel_1686 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: Strongly similar to membrane-bound [NiFe]-hydrogenase-3, small subunit (Chain G); PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit.


ensembl_gene_id: Sgly_0129
symbol: Sgly_0129
gene_biotype: protein_coding
description:
  COGs: COG4824 Phage-related holin (Lysis protein); InterPro IPR006480; KEGG: amt:Amet_4016 toxin secretion/phage lysis holin; PFAM: Holin, toxin secretion/phage lysis; SPTR: Holin; TIGRFAM: Holin, toxin secretion/phage lysis; PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin.


ensembl_gene_id: Sgly_0130
symbol: Sgly_0130
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein, PhoT family; COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR006059: IPR011862; KEGG: thx:Thet_0942 phosphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Phosphate binding protein; TIGRFAM: Phosphate binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein.


ensembl_gene_id: Sgly_0131
symbol: Sgly_0131
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Sgly_0132
symbol: Sgly_0132
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 2, PhoT family; COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR005672; KEGG: tte:TTE1629 ABC-type phosphate transport system, permease component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA.


ensembl_gene_id: Sgly_0133
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: Sgly_0135
symbol: Sgly_0135
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: cce:Ccel_2106 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcription [...]


ensembl_gene_id: Sgly_0136
symbol: Sgly_0136
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003660: IPR003661: IPR003594: IPR013767; KEGG: cce:Ccel_2107 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS fold; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fol [...]


ensembl_gene_id: Sgly_0137
symbol: Sgly_0137
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000160; KEGG: cbe:Cbei_3303 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Sgly_0138
symbol: Sgly_0138
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: cac:CA_C2702 signal transduction protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; SPTR: Possible signal transduction protein (Containing EAL, CBS and GGDEF domains); PFAM: EAL domain.


ensembl_gene_id: Sgly_0139
symbol: Sgly_0139
gene_biotype: protein_coding
description:
  KEGG: dae:Dtox_2731 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Sgly_0140
symbol: Sgly_0140
gene_biotype: protein_coding
description:
  COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: cbb:CLD_1248 Slt family transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Transglycosylase, SLT family; PFAM: Transglycosylase SLT domain.


ensembl_gene_id: Sgly_0141
symbol: Sgly_0141
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 1; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR006439; KEGG: amr:AM1_3122 haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: Sgly_0142
symbol: Sgly_0142
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: slp:Slip_0727 secretion protein HlyD family protein; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD family protein; PFAM: HlyD family secretion protein.


ensembl_gene_id: Sgly_0143
symbol: Sgly_0143
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: drm:Dred_1587 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0144
symbol: Sgly_0144
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: pth:PTH_1515 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0145
symbol: Sgly_0145
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: slp:Slip_0730 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.


ensembl_gene_id: Sgly_0146
symbol: Sgly_0146
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: pth:PTH_1513 transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_0147
symbol: Sgly_0147
gene_biotype: protein_coding
description:
  COGs: COG0248 Exopolyphosphatase; InterPro IPR003607: IPR003695: IPR006674; KEGG: pmo:Pmob_0465 exopolyphosphatase-like protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Ppx/GppA phosphatase; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Exopolyphosphatase-like protein; PFAM: HD domain; Ppx/GppA phosphatase family.


ensembl_gene_id: Sgly_0148
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: Sgly_0149
symbol: Sgly_0149
gene_biotype: protein_coding
description:
  COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: drm:Dred_1179 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; PRIAM: Guanosine-5'-triphosphate,3'-diphosphate diphosphatase; SPTR: Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase.


ensembl_gene_id: Sgly_0150
symbol: Sgly_0150
gene_biotype: protein_coding
description:
  COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR001395; KEGG: tma:TM1183 aldo/keto reductase family oxidoreductase; PFAM: Aldo/keto reductase; SPTR: Oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family.


ensembl_gene_id: Sgly_0151
symbol: Sgly_0151
gene_biotype: protein_coding
description:
  Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: slp:Slip_1139 diguanylate cyclase/phosphodiesterase with GAF sensor; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase/phosphodiesterase; TIGRFAM: Diguanylate cyclase, predicted; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: Sgly_0152
symbol: Sgly_0152
gene_biotype: protein_coding
description:
  Amine oxidase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937; KEGG: ccb:Clocel_0454 amine oxidase; PFAM: Amine oxidase; SPTR: Amine oxidase; PFAM: Flavin containing amine oxidoreductase.


ensembl_gene_id: Sgly_0153
symbol: Sgly_0153
gene_biotype: protein_coding
description:
  Metallophosphoesterase; InterPro IPR004843; KEGG: tit:Thit_1870 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Predicted protein; PFAM: Calcineurin-like phosphoesterase; NACHT domain.


ensembl_gene_id: Sgly_0154
symbol: Sgly_0154
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1980; COGs: COG3689 membrane protein; InterPro IPR015402; KEGG: dhd:Dhaf_0048 protein of unknown function DUF1980; PFAM: Protein of unknown function DUF1980; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1980).


ensembl_gene_id: Sgly_0155
symbol: Sgly_0155
gene_biotype: protein_coding
description:
  COGs: COG0701 permease; InterPro IPR005524; KEGG: dhd:Dhaf_0047 permease; PFAM: Protein of unknown function DUF318, transmembrane; SPTR: Permease; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Predicted permease.


ensembl_gene_id: Sgly_0156
symbol: Sgly_0156
gene_biotype: protein_coding
description:
  Cobalamin synthesis protein P47K; COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495: IPR011629; KEGG: dhd:Dhaf_0046 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SPTR: Cobalamin synthesis protein P47K; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB.


ensembl_gene_id: Sgly_0157
symbol: Sgly_0157
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dsy:DSY0106 hypothetical protein; PFAM: Ferric-uptake regulator; SPTR: Putative uncharacterized protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Sgly_0158
symbol: Sgly_0158
gene_biotype: protein_coding
description:
  ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: vpr:Vpar_0238 ABC-3 protein; PFAM: ABC-3; SPTR: ABC-3 protein; PFAM: ABC 3 transport family.


ensembl_gene_id: Sgly_0159
symbol: Sgly_0159
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: vpr:Vpar_0239 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0160
symbol: Sgly_0160
gene_biotype: protein_coding
description:
  Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: clj:CLJU_c37880 putative metal-binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Putative uncharacterized protein; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: Sgly_0161
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Sgly_0162
symbol: Sgly_0162
gene_biotype: protein_coding
description:
  UPF0133 protein ybaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Sgly_0163
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: Sgly_0164
symbol: Sgly_0164
gene_biotype: protein_coding
description:
  sigmaK-factor processing regulatory BofA; InterPro IPR010001; KEGG: dsy:DSY0114 hypothetical protein; PFAM: SigmaK-factor processing regulatory BofA; SPTR: Putative uncharacterized protein; PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA.


ensembl_gene_id: Sgly_0165
symbol: Sgly_0165
gene_biotype: protein_coding
description:
  COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880: IPR019752: IPR019456: IPR011766: IPR 011895; KEGG: dhd:Dhaf_0054 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavo [...]


ensembl_gene_id: Sgly_0167
symbol: Sgly_0167
gene_biotype: protein_coding
description:
  Sigma-G inhibitor, Gin; InterPro IPR019700; KEGG: slp:Slip_0044 sigma-G inhibitor, Gin; PFAM: Sigma-G inhibitor, Gin; SPTR: Sigma-G inhibitor, Gin; PFAM: Inhibitor of sigma-G Gin.


ensembl_gene_id: Sgly_0168
symbol: Sgly_0168
gene_biotype: protein_coding
description:
  COGs: COG1982 Arginine/lysine/ornithine decarboxylase; InterPro IPR000310: IPR008286; KEGG: dsy:DSY0121 hypothetical protein; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, C-terminal; PRIAM: Arginine decarboxylase; SPTR: Putative uncharacterized protein; PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain.


ensembl_gene_id: Sgly_0169
symbol: Sgly_0169
gene_biotype: protein_coding
description:
  COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: dhd:Dhaf_0061 DNA-directed DNA polymerase; SPTR: DNA-directed DNA polymerase; manually curated.


ensembl_gene_id: Sgly_0170
symbol: Sgly_0170
gene_biotype: protein_coding
description:
  PSP1 domain protein; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: dhd:Dhaf_0062 PSP1 domain protein; PFAM: PSP1, C-terminal; SPTR: Putative uncharacterized protein; PFAM: PSP1 C-terminal conserved region.


ensembl_gene_id: Sgly_0171
symbol: Sgly_0171
gene_biotype: protein_coding
description:
  Protein of unknown function DUF972; COGs: COG4467 conserved hypothetical protein; InterPro IPR010377; KEGG: dsy:DSY0124 hypothetical protein; PFAM: Protein of unknown function DUF972; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF972).


ensembl_gene_id: Sgly_0172
symbol: rsmI
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: Sgly_0173
symbol: Sgly_0173
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; COGs: COG2002 Regulators of stationary/sporulation gene expression; InterPro IPR007159: IPR006339; KEGG: dhd:Dhaf_0065 transcriptional regulator, AbrB family; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Transcription regulator AbrB; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Sgly_0174
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Sgly_0175
symbol: Sgly_0175
gene_biotype: protein_coding
description:
  Hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130: IPR015991; KEGG: dhd:Dhaf_0068 hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative uncharacterized protein; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.


ensembl_gene_id: Sgly_0176
symbol: Sgly_0176
gene_biotype: protein_coding
description:
  Protein of unknown function DUF45; COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: dhd:Dhaf_0373 protein of unknown function DUF45; PFAM: Protein of unknown function DUF45; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF45.


ensembl_gene_id: Sgly_0177
symbol: Sgly_0177
gene_biotype: protein_coding
description:
  Peptidase S26B, signal peptidase; InterPro IPR019759: IPR001733; KEGG: tsi:TSIB_1249 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26B, eukaryotic signal peptidase; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type.


ensembl_gene_id: Sgly_0179
symbol: Sgly_0179
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR007197; KEGG: hmo:HM1_1854 radical sam domain protein, putative; PFAM: Radical SAM; SPTR: Radical sam domain protein, putative.


ensembl_gene_id: Sgly_0180
symbol: Sgly_0180
gene_biotype: protein_coding
description:
  COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: cth:Cthe_0614 indolepyruvate oxidoreductase subunit beta; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.


ensembl_gene_id: Sgly_0181
symbol: Sgly_0181
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: Sgly_0182
symbol: Sgly_0182
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: Sgly_0184
symbol: rnmV
gene_biotype: protein_coding
description:
  RNAse M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: Sgly_0185
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Sgly_0186
symbol: Sgly_0186
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer with Cache sensor; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089: IPR013163; KEGG: dhd:Dhaf_0079 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Putative uncharacterized protein; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_0187
symbol: Sgly_0187
gene_biotype: protein_coding
description:
  Sporulation peptidase YabG; InterPro IPR008764; KEGG: dhd:Dhaf_0082 sporulation peptidase YabG; PFAM: Peptidase U57, YabG; SPTR: Putative uncharacterized protein; TIGRFAM: Peptidase U57, YabG; PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG.


ensembl_gene_id: Sgly_0188
symbol: Sgly_0188
gene_biotype: protein_coding
description:
  COGs: COG4242 Cyanophycinase and related exopeptidase; InterPro IPR005320: IPR011811; KEGG: dhd:Dhaf_0084 cyanophycinase; PFAM: Peptidase S51, dipeptidase E; PRIAM: Cyanophycinase; SPTR: Putative uncharacterized protein; TIGRFAM: Cyanophycinase; PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; Belongs to the peptidase S51 family.


ensembl_gene_id: Sgly_0189
symbol: Sgly_0189
gene_biotype: protein_coding
description:
  Cyanophycin synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR003135: IPR013651: IPR013221: IPR004101: IPR 011810; KEGG: dsy:DSY0146 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; ATP-grasp fold, RimK-type; Mur ligase, C-terminal; PRIAM: Cyanophycin synthase (L-aspartate-adding); SPTR: Putative uncharacterized protein; TIGRFAM: Cyanophycin synthetase; PFAM: Mur ligase family, glutamate ligase domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Mur ligase middle domain; TIGRFAM: [...]


ensembl_gene_id: Sgly_0190
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D- erythritolkinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: Sgly_0191
symbol: Sgly_0191
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: dhd:Dhaf_0088 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.


ensembl_gene_id: Sgly_0192
symbol: Sgly_0192
gene_biotype: protein_coding
description:
  Purine operon repressor, PurR; COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR015265: IPR000836: IPR010078; KEGG: dhd:Dhaf_0089 pur operon repressor; PFAM: Bacterial purine repressor, N-terminal; Phosphoribosyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Pur operon repressor; PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; xanthine phosphoribosyltransferase.


ensembl_gene_id: Sgly_0194
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: Sgly_0195
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Sgly_0196
symbol: Sgly_0196
gene_biotype: protein_coding
description:
  PRC-barrel domain protein; COGs: COG3881 conserved hypothetical protein; InterPro IPR007903; KEGG: dhd:Dhaf_0118 PRC-barrel domain protein; PFAM: PRC-barrel; SPTR: Putative uncharacterized protein; PFAM: PRC-barrel domain.


ensembl_gene_id: Sgly_0197
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Sgly_0199
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Sgly_0200
symbol: Sgly_0200
gene_biotype: protein_coding
description:
  COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: dhd:Dhaf_0132 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: Putative uncharacterized protein; PFAM: PPIC-type PPIASE domain.


ensembl_gene_id: Sgly_0201
symbol: Sgly_0201
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; InterPro IPR007159: IPR003018: IPR014213: IPR006339; KEGG: dhd:Dhaf_0133 transcriptional regulator, AbrB family; PFAM: Transcription regulator AbrB/SpoV, predicted; GAF; SPTR: Putative uncharacterized protein; TIGRFAM: Sporulation stage V, protein T; Transcription regulator AbrB; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T.


ensembl_gene_id: Sgly_0202
symbol: Sgly_0202
gene_biotype: protein_coding
description:
  MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518: IPR011551; KEGG: tjr:TherJR_0182 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.


ensembl_gene_id: Sgly_0203
symbol: Sgly_0203
gene_biotype: protein_coding
description:
  Bacterial nucleoid protein Hbs; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Sgly_0204
symbol: Sgly_0204
gene_biotype: protein_coding
description:
  RNA-binding S4 domain protein; COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: dhd:Dhaf_0136 RNA-binding S4 domain protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: Putative uncharacterized protein; PFAM: S4 domain.


ensembl_gene_id: Sgly_0205
symbol: Sgly_0205
gene_biotype: protein_coding
description:
  Sporulation protein YabP; InterPro IPR012504; KEGG: dhd:Dhaf_0138 sporulation protein YabP; PFAM: Sporulation protein YabP; SPTR: Putative uncharacterized protein; TIGRFAM: Sporulation protein YabP; PFAM: YabP family; TIGRFAM: sporulation protein YabP.


ensembl_gene_id: Sgly_0206
symbol: Sgly_0206
gene_biotype: protein_coding
description:
  Spore cortex biosynthesis protein, YabQ; InterPro IPR019074; KEGG: dsy:DSY0196 hypothetical protein; PFAM: Spore cortex biosynthesis protein, YabQ-like; SPTR: Putative uncharacterized protein; PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ.


ensembl_gene_id: Sgly_0207
symbol: Sgly_0207
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_0140 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4.


ensembl_gene_id: Sgly_0208
symbol: Sgly_0208
gene_biotype: protein_coding
description:
  Septum formation initiator; InterPro IPR007060; KEGG: dhd:Dhaf_0141 septum formation initiator; PFAM: Septum formation initiator; SPTR: Putative uncharacterized protein; PFAM: Septum formation initiator.


ensembl_gene_id: Sgly_0209
symbol: Sgly_0209
gene_biotype: protein_coding
description:
  Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932: IPR010822; KEGG: dsy:DSY0199 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; PRIAM: Phosphoprotein phosphatase; SMART: Protein phosphatase 2C-related; SPTR: Putative uncharacterized protein; PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E.


ensembl_gene_id: Sgly_0210
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Sgly_0211
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Sgly_0212
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Sgly_0213
symbol: Sgly_0213
gene_biotype: protein_coding
description:
  Protein of unknown function DUF881; COGs: COG3879 conserved hypothetical protein; InterPro IPR010273; KEGG: dhd:Dhaf_0147 protein of unknown function DUF881; PFAM: Protein of unknown function DUF881, bacterial; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF881).


ensembl_gene_id: Sgly_0214
symbol: Sgly_0214
gene_biotype: protein_coding
description:
  Protein of unknown function DUF881; COGs: COG3879 conserved hypothetical protein; InterPro IPR010273; KEGG: dhd:Dhaf_0148 protein of unknown function DUF881; PFAM: Protein of unknown function DUF881, bacterial; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF881).


ensembl_gene_id: Sgly_0215
symbol: fhs
gene_biotype: protein_coding
description:
  Formate-tetrahydrofolate ligase; COGs: COG2759 Formyltetrahydrofolate synthetase; HAMAP: Formate-tetrahydrofolate ligase, FTHFS; InterPro IPR000559; KEGG: dhd:Dhaf_0149 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase.


ensembl_gene_id: Sgly_0216
symbol: Sgly_0216
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: Sgly_0217
symbol: Sgly_0217
gene_biotype: protein_coding
description:
  COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: dhd:Dhaf_0153 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase; SPTR: Putative uncharacterized protein; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.


ensembl_gene_id: Sgly_0218
symbol: Sgly_0218
gene_biotype: protein_coding
description:
  Domain of unknown function DUF2520-containing protein; COGs: COG5495 conserved hypothetical protein; InterPro IPR019665: IPR018931; KEGG: dhd:Dhaf_0154 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2520); Rossmann-like domain.


ensembl_gene_id: Sgly_0219
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Sgly_0220
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Sgly_0221
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Sgly_0223
symbol: Sgly_0223
gene_biotype: protein_coding
description:
  COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638: IPR004393; KEGG: dhd:Dhaf_0158 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Nicotinate nucleotide pyrophosphorylase; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.


ensembl_gene_id: Sgly_0224
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Sgly_0225
symbol: Sgly_0225
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Sgly_0226
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Sgly_0227
symbol: lysS
gene_biotype: protein_coding
description:
  COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR004365: IPR004364: IPR002313; KEGG: dhd:Dhaf_0163 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Sgly_0229
symbol: Sgly_0229
gene_biotype: protein_coding
description:
  Peptidase T-like protein; COGs: COG2195 Di- and tripeptidase; InterPro IPR002933: IPR011650: IPR010162; KEGG: aar:Acear_1716 peptidase T-like protein; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Peptidase T-like protein; TIGRFAM: Peptidase M20B, peptidase T; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; peptidase T-like protein.


ensembl_gene_id: Sgly_0231
symbol: Sgly_0231
gene_biotype: protein_coding
description:
  COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: dhd:Dhaf_0177 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Sgly_0232
symbol: Sgly_0232
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mta:Moth_2322 secretion protein HlyD; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Sgly_0233
symbol: Sgly_0233
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mta:Moth_2323 secretion protein HlyD; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; PFAM: HlyD family secretion protein.


ensembl_gene_id: Sgly_0234
symbol: Sgly_0234
gene_biotype: protein_coding
description:
  Drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR004638; KEGG: ttm:Tthe_2574 drug resistance transporter, EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Sgly_0235
symbol: Sgly_0235
gene_biotype: protein_coding
description:
  Regulatory protein MarR; InterPro IPR000835; KEGG: tte:TTE2515 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator; PFAM: MarR family.


ensembl_gene_id: Sgly_0239
symbol: Sgly_0239
gene_biotype: protein_coding
description:
  KEGG: amt:Amet_1381 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: YKOF-related Family.


ensembl_gene_id: Sgly_0241
symbol: Sgly_0241
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cby:CLM_3318 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain.


ensembl_gene_id: Sgly_0242
symbol: Sgly_0242
gene_biotype: protein_coding
description:
  COGs: COG3949 Uncharacterized membrane protein; KEGG: tjr:TherJR_2224 uncharacterized membrane protein; SPTR: Uncharacterized membrane protein; PFAM: Spore germination protein.


ensembl_gene_id: Sgly_0243
symbol: Sgly_0243
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cpy:Cphy_3867 methyl-accepting chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Sgly_0244
symbol: Sgly_0244
gene_biotype: protein_coding
description:
  Sporulation protein YtxC; InterPro IPR014199; KEGG: dhd:Dhaf_0184 sporulation protein YtxC; PFAM: Sporulation protein YtxC; SPTR: Putative uncharacterized protein; PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC.


ensembl_gene_id: Sgly_0245
symbol: thrS
gene_biotype: protein_coding
description:
  Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: Sgly_0246
symbol: Sgly_0246
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG3481 HD-superfamily hydrolase; InterPro IPR003607: IPR004365: IPR006674; KEGG: cno:NT01CX_1237 HD domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: HD domain protein; PFAM: HD domain; OB-fold nucleic acid binding domain.


ensembl_gene_id: Sgly_0247
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Sgly_0248
symbol: rpmI
gene_biotype: protein_coding
description:
  HAMAP: Ribosomal protein L35, non-mitochondrial; InterPro IPR021137: IPR001706; KEGG: dhd:Dhaf_0216 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Sgly_0249
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Sgly_0250
symbol: Sgly_0250
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase (SpoU); COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537; KEGG: dhd:Dhaf_0218 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: Sgly_0252
symbol: pheS
gene_biotype: protein_coding
description:
  COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; InterPro IPR004188: IPR002319: IPR004529; KEGG: dhd:Dhaf_0219 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; Belongs  [...]


ensembl_gene_id: Sgly_0253
symbol: pheT
gene_biotype: protein_coding
description:
  COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterPro IPR002547: IPR005146: IPR005147: IPR005121: IPR 004532; KEGG: dsy:DSY0272 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/B4 tRNA-binding domain; tRNA-binding domain; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Putative uncharacterized protein; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding  [...]


ensembl_gene_id: Sgly_0254
symbol: Sgly_0254
gene_biotype: protein_coding
description:
  Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: Sgly_0255
symbol: Sgly_0255
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: dsy:DSY0769 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0256
symbol: Sgly_0256
gene_biotype: protein_coding
description:
  Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: dhd:Dhaf_0229 peptidase U32; PFAM: Peptidase U32; SPTR: Putative uncharacterized protein; PFAM: Collagenase; Peptidase family U32.


ensembl_gene_id: Sgly_0257
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein, MutS family; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: Sgly_0259
symbol: Sgly_0259
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: dsy:DSY2813 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_0260
symbol: Sgly_0260
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: tjr:TherJR_2639 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_0261
symbol: Sgly_0261
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: tjr:TherJR_2638 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcripti [...]


ensembl_gene_id: Sgly_0262
symbol: Sgly_0262
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264: IPR001460: IPR011816; KEGG: dhd:Dhaf_0235 penicillin-binding protein, 1A family; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: Putative uncharacterized protein; TIGRFAM: Penicillin-binding protein 1A; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.


ensembl_gene_id: Sgly_0263
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Sgly_0264
symbol: Sgly_0264
gene_biotype: protein_coding
description:
  L-fuculose-phosphate aldolase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: mta:Moth_2271 class II aldolase/adducin-like; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-fuculose-phosphate aldolase; SPTR: Class II aldolase/adducin-like; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.


ensembl_gene_id: Sgly_0265
symbol: Sgly_0265
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: pan:PODANSg1735 hypothetical protein; PFAM: Endoribonuclease L-PSP; SPTR: Predicted CDS Pa_5_8950; PFAM: Endoribonuclease L-PSP.


ensembl_gene_id: Sgly_0266
symbol: Sgly_0266
gene_biotype: protein_coding
description:
  COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: tpd:Teth39_1552 cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.


ensembl_gene_id: Sgly_0267
symbol: Sgly_0267
gene_biotype: protein_coding
description:
  KEGG: dsy:DSY1696 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Coat F domain.


ensembl_gene_id: Sgly_0268
symbol: Sgly_0268
gene_biotype: protein_coding
description:
  Catalase; COGs: COG3546 Mn-containing catalase; InterPro IPR007760; KEGG: chy:CHY_0786 cotJC protein; PFAM: Catalase, manganese; PRIAM: Catalase; SPTR: CotJC protein; PFAM: Manganese containing catalase.


ensembl_gene_id: Sgly_0269
symbol: Sgly_0269
gene_biotype: protein_coding
description:
  KEGG: rme:Rmet_4662 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1232).


ensembl_gene_id: Sgly_0270
symbol: Sgly_0270
gene_biotype: protein_coding
description:
  COGs: COG3458 Acetyl esterase (deacetylase); InterPro IPR008391; KEGG: dhd:Dhaf_0284 acetyl xylan esterase; PFAM: Acetyl xylan esterase; PRIAM: Cephalosporin-C deacetylase; SPTR: Acetyl xylan esterase; PFAM: Acetyl xylan esterase (AXE1).


ensembl_gene_id: Sgly_0271
symbol: Sgly_0271
gene_biotype: protein_coding
description:
  COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835: IPR005771; KEGG: nth:Nther_2537 UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: UDP-glucose pyrophosphorylase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase.


ensembl_gene_id: Sgly_0272
symbol: Sgly_0272
gene_biotype: protein_coding
description:
  Protein of unknown function DUF805; COGs: COG3152 membrane protein; InterPro IPR008523; KEGG: cte:CT1580 aminopeptidase C, putative; PFAM: Protein of unknown function DUF805; SPTR: Aminopeptidase C, putative; PFAM: Protein of unknown function (DUF805).


ensembl_gene_id: Sgly_0273
symbol: Sgly_0273
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: ctc:CTC00484 membrane-associated protein; PFAM: Secretion protein HlyD; SPTR: Conserved membrane-associated protein; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.


ensembl_gene_id: Sgly_0274
symbol: Sgly_0274
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; InterPro IPR003838; KEGG: ccu:Ccur_03260 predicted membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.


ensembl_gene_id: Sgly_0275
symbol: Sgly_0275
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cbe:Cbei_0262 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0276
symbol: Sgly_0276
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: msv:Mesil_3303 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.


ensembl_gene_id: Sgly_0277
symbol: Sgly_0277
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: psl:Psta_0475 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related-protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0279
symbol: Sgly_0279
gene_biotype: protein_coding
description:
  COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: afn:Acfer_1880 alkaline phosphatase; PFAM: Alkaline phosphatase; PRIAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; PFAM: Alkaline phosphatase; Belongs to the alkaline phosphatase family.


ensembl_gene_id: Sgly_0280
symbol: Sgly_0280
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: ols:Olsu_0226 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_0282
symbol: Sgly_0282
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: ckr:CKR_3298 hypothetical protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system, ATPase and permease components; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_0283
symbol: Sgly_0283
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: ckr:CKR_3299 hypothetical protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system, ATPase and permease components; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_0285
symbol: Sgly_0285
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR007253: IPR013378; KEGG: clj:CLJU_c05110 putative cell wall-binding protein; PFAM: Putative cell wall binding repeat 2; Listeria/Bacterioides repeat; SPTR: Bacterial Ig-like domain (Group 2); PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); YodA; Putative cell wall binding repeat 2; TIGRFAM: Listeria/Bacterioides repeat.


ensembl_gene_id: Sgly_0289
symbol: Sgly_0289
gene_biotype: protein_coding
description:
  Protein of unknown function DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; KEGG: dhd:Dhaf_3335 protein of unknown function DUF255; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255.


ensembl_gene_id: Sgly_0291
symbol: Sgly_0291
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: dsy:DSY0429 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain.


ensembl_gene_id: Sgly_0293
symbol: Sgly_0293
gene_biotype: protein_coding
description:
  COGs: COG4463 Transcriptional repressor of class III stress genes; InterPro IPR008463; KEGG: dhd:Dhaf_0386 transcriptional repressor, CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes; SPTR: Putative uncharacterized protein; PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR); Belongs to the CtsR family.


ensembl_gene_id: Sgly_0294
symbol: Sgly_0294
gene_biotype: protein_coding
description:
  UvrB/UvrC protein; COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; InterPro IPR001943; KEGG: dhd:Dhaf_0387 UvrB/UvrC protein; PFAM: UvrB/UvrC protein; SPTR: Putative uncharacterized protein; PFAM: UvrB/uvrC motif.


ensembl_gene_id: Sgly_0295
symbol: mcsB
gene_biotype: protein_coding
description:
  ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family.


ensembl_gene_id: Sgly_0296
symbol: Sgly_0296
gene_biotype: protein_coding
description:
  ATPase AAA-2 domain protein; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR003593: IPR004176: IPR003959: IPR001943: IPR 013093: IPR019489; KEGG: dhd:Dhaf_0389 ATPase AAA-2 domain protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; Belo [...]


ensembl_gene_id: Sgly_0297
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Sgly_0299
symbol: Sgly_0299
gene_biotype: protein_coding
description:
  COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR006596: IPR002716: IPR002792; KEGG: dsy:DSY0442 hypothetical protein; PFAM: PilT protein, N-terminal; Deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein, PINc; SPTR: Putative uncharacterized protein; PFAM: TRAM domain; PIN domain.


ensembl_gene_id: Sgly_0300
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: Sgly_0301
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: Sgly_0302
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: Sgly_0303
symbol: cysS
gene_biotype: protein_coding
description:
  COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803: IPR015273: IPR002308; KEGG: dhd:Dhaf_0398 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Sgly_0304
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: Sgly_0305
symbol: Sgly_0305
gene_biotype: protein_coding
description:
  COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796; KEGG: cth:Cthe_1226 dihydrofolate reductase; PFAM: Dihydrofolate reductase domain; SPTR: Dihydrofolate reductase; PFAM: Dihydrofolate reductase.


ensembl_gene_id: Sgly_0306
symbol: Sgly_0306
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537: IPR004441; KEGG: dhd:Dhaf_0401 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: Putative uncharacterized protein; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH  [...]


ensembl_gene_id: Sgly_0307
symbol: Sgly_0307
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 30 subunit, SigH; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014218: IPR014284; KEGG: dhd:Dhaf_0402 RNA polymerase factor sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-H type; RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor.


ensembl_gene_id: Sgly_0308
symbol: Sgly_0308
gene_biotype: protein_coding
description:
  Recombinase; InterPro IPR006119: IPR011109; KEGG: thx:Thet_2227 recombinase; PFAM: Recombinase; Resolvase, N-terminal; SPTR: Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.


ensembl_gene_id: Sgly_0309
symbol: Sgly_0309
gene_biotype: protein_coding
description:
  Restriction endonuclease, type I, R subunit/Type III; COGs: COG4748 conserved hypothetical protein; InterPro IPR007409; KEGG: chu:CHU_0499 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Putative uncharacterized protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N).


ensembl_gene_id: Sgly_0310
symbol: Sgly_0310
gene_biotype: protein_coding
description:
  Phage repressor like transcriptional regulator, XRE family; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR001387: IPR019759; KEGG: pjd:Pjdr2_1579 transcriptional regulator, XRE family; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA.


ensembl_gene_id: Sgly_0314
symbol: Sgly_0314
gene_biotype: protein_coding
description:
  KEGG: mno:Mnod_3582 type I restriction-modification system methyltransferase subunit-like protein; SPTR: Type I restriction-modification system methyltransferase subunit-like protein; PFAM: Methyltransferase small domain; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Sgly_0316
symbol: Sgly_0316
gene_biotype: protein_coding
description:
  COGs: COG3773 Cell wall hydrolyses involved in spore germination; InterPro IPR011105; KEGG: hor:Hore_03060 spore cortex-lytic enzyme SleB; PFAM: Cell wall hydrolase, SleB; SPTR: Spore cortex-lytic enzyme SleB; PFAM: Cell Wall Hydrolase.


ensembl_gene_id: Sgly_0319
symbol: Sgly_0319
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; InterPro IPR007159: IPR006339; KEGG: adg:Adeg_2116 transcriptional regulator, AbrB family; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Sgly_0320
symbol: Sgly_0320
gene_biotype: protein_coding
description:
  SMC domain protein; InterPro IPR003395; KEGG: cce:Ccel_3310 SMC domain protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: SMC domain protein.


ensembl_gene_id: Sgly_0323
symbol: Sgly_0323
gene_biotype: protein_coding
description:
  Type III restriction protein res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935: IPR001650: IPR014001; KEGG: cce:Ccel_3307 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Type III restriction protein res subunit; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.


ensembl_gene_id: Sgly_0324
symbol: Sgly_0324
gene_biotype: protein_coding
description:
  KEGG: spj:MGAS2096_Spy0566 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Sgly_0325
symbol: Sgly_0325
gene_biotype: protein_coding
description:
  Primase 2; COGs: COG3598 RecA-family ATPase; InterPro IPR014819; KEGG: cce:Ccel_3304 primase 2; PFAM: Primase, C-terminal 2; SPTR: Primase 2; PFAM: Primase C terminal 2 (PriCT-2).


ensembl_gene_id: Sgly_0326
symbol: Sgly_0326
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cin:100181533 similar to Down syndrome cell adhesion molecule CG17800-PAJ.


ensembl_gene_id: Sgly_0328
symbol: Sgly_0328
gene_biotype: protein_coding
description:
  Endodeoxyribonuclease RusA; COGs: COG4570 Holliday junction resolvase; InterPro IPR008822; KEGG: cce:Ccel_3302 endodeoxyribonuclease RusA; PFAM: Endodeoxyribonuclease, RusA-like; SPTR: Endodeoxyribonuclease RusA; PFAM: Endodeoxyribonuclease RusA.


ensembl_gene_id: Sgly_0331
symbol: Sgly_0331
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rlg:Rleg_2705 putative nucleotidyltransferase protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0334
symbol: Sgly_0334
gene_biotype: protein_coding
description:
  Terminase small subunit; InterPro IPR005335; KEGG: lhk:LHK_01511 hypothetical protein; PFAM: Terminase small subunit; SPTR: Putative uncharacterized protein; PFAM: Terminase small subunit.


ensembl_gene_id: Sgly_0335
symbol: Sgly_0335
gene_biotype: protein_coding
description:
  KEGG: cce:Ccel_3297 putative phage terminase, large subunit; SPTR: Putative phage terminase, large subunit; PFAM: Terminase-like family; TIGRFAM: phage terminase, large subunit, PBSX family.


ensembl_gene_id: Sgly_0336
symbol: Sgly_0336
gene_biotype: protein_coding
description:
  KEGG: shi:Shel_03460 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage portal protein, putative, A118 family.


ensembl_gene_id: Sgly_0338
symbol: Sgly_0338
gene_biotype: protein_coding
description:
  Minor capsid 2 protein; InterPro IPR009319; KEGG: ere:EUBREC_1286 hypothetical protein; PFAM: Phage minor capsid 2; SPTR: Minor capsid 2 protein; PFAM: Phage minor capsid protein 2.


ensembl_gene_id: Sgly_0339
symbol: Sgly_0339
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: lin:lin0108 putative scaffolding protein; SPTR: Putative uncharacterized protein; PFAM: Phage minor structural protein GP20.


ensembl_gene_id: Sgly_0344
symbol: Sgly_0344
gene_biotype: protein_coding
description:
  KEGG: ere:EUBREC_1294 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Minor capsid.


ensembl_gene_id: Sgly_0348
symbol: Sgly_0348
gene_biotype: protein_coding
description:
  KEGG: ccb:Clocel_3534 putative protein GP15; SPTR: Putative uncharacterized protein; PFAM: Bacteriophage Gp15 protein.


ensembl_gene_id: Sgly_0350
symbol: Sgly_0350
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cin:100182013 similar to fibronectin; SPTR: Hypothetical secreted protein.


ensembl_gene_id: Sgly_0352
symbol: Sgly_0352
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pjd:Pjdr2_1552 phage-related protein-like protein; SPTR: Phage-related protein-like protein.


ensembl_gene_id: Sgly_0359
symbol: Sgly_0359
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tye:THEYE_A0557 organic solvent tolerance protein; SPTR: Organic solvent tolerance protein.


ensembl_gene_id: Sgly_0360
symbol: Sgly_0360
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sno:Snov_0518 extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1.


ensembl_gene_id: Sgly_0361
symbol: Sgly_0361
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pth:PTH_2177 RTX toxins and related Ca2+-binding proteins; SPTR: RTX toxins and related Ca2+-binding proteins; PFAM: Glycosyl hydrolases family 16.


ensembl_gene_id: Sgly_0362
symbol: Sgly_0362
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nmg:Nmag_2587 chromosome segregation protein SMC; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0363
symbol: Sgly_0363
gene_biotype: protein_coding
description:
  InterPro IPR002502; KEGG: xtr:595014 pglyrp1 protein; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: Prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase.


ensembl_gene_id: Sgly_0364
symbol: Sgly_0364
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pcr:Pcryo_0749 transmembrane pair; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0368
symbol: Sgly_0368
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bsu:BSU20950 putative transcriptional regulator; phage SPbeta; SPTR: Putative uncharacterized protein yopB.


ensembl_gene_id: Sgly_0369
symbol: Sgly_0369
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); KEGG: cth:Cthe_2752 beta-lactamase-like protein; SPTR: Beta-lactamase-like protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Sgly_0370
symbol: Sgly_0370
gene_biotype: protein_coding
description:
  KEGG: tte:TTE2431 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3006).


ensembl_gene_id: Sgly_0372
symbol: Sgly_0372
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR008250: IPR005834: IPR006416: IPR001757; KEGG: amu:Amuc_1083 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (tr [...]


ensembl_gene_id: Sgly_0374
symbol: Sgly_0374
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: llk:LLKF_1828 2-heptaprenyl-1,4-naphthoquinone methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: ubiE/COQ5 methyltransferase family.


ensembl_gene_id: Sgly_0375
symbol: Sgly_0375
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: ckr:CKR_1969 hypothetical protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative uncharacterized protein; PFAM: Iron only hydrogenase large subunit, C-terminal domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_0376
symbol: Sgly_0376
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2179; COGs: COG1284 conserved hypothetical protein; InterPro IPR003740: IPR019264; KEGG: ttm:Tthe_2653 protein of unknown function DUF2179; PFAM: Protein of unknown function DUF2179; Protein of unknown function DUF161; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179).


ensembl_gene_id: Sgly_0377
symbol: rpmG
gene_biotype: protein_coding
description:
  HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: dhd:Dhaf_0403 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: Sgly_0378
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: Sgly_0379
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Sgly_0380
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Sgly_0381
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Sgly_0382
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Sgly_0383
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Sgly_0384
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Sgly_0386
symbol: Sgly_0386
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_0416 ribosomal protein L7AE family protein; SPTR: Probable ribosomal protein; PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family.


ensembl_gene_id: Sgly_0387
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: Sgly_0388
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Sgly_0389
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: Sgly_0390
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: Sgly_0391
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Sgly_0392
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: Sgly_0394
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Sgly_0395
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Sgly_0396
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Sgly_0397
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: Sgly_0398
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Sgly_0399
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Sgly_0400
symbol: rpmC
gene_biotype: protein_coding
description:
  COGs: COG0255 Ribosomal protein L29; InterPro IPR001854; KEGG: dhd:Dhaf_0430 50S ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: Sgly_0401
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Sgly_0402
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Sgly_0403
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: Sgly_0404
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Sgly_0405
symbol: rpsZ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: Sgly_0406
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Sgly_0407
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Sgly_0408
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Sgly_0409
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Sgly_0410
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Sgly_0411
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Sgly_0412
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: Sgly_0413
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Sgly_0414
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Sgly_0415
symbol: rpmJ
gene_biotype: protein_coding
description:
  HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: dhd:Dhaf_0446 50S ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; manually curated; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: Sgly_0416
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Sgly_0417
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Sgly_0418
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Sgly_0419
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Sgly_0420
symbol: rplQ
gene_biotype: protein_coding
description:
  COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: mta:Moth_2430 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17.


ensembl_gene_id: Sgly_0421
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Sgly_0422
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Sgly_0423
symbol: rpsI
gene_biotype: protein_coding
description:
  COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: dhd:Dhaf_0727 30S ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: Sgly_0424
symbol: Sgly_0424
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: bpf:BpOF4_06445 hypothetical protein; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family.


ensembl_gene_id: Sgly_0425
symbol: Sgly_0425
gene_biotype: protein_coding
description:
  Integral membrane protein, YjbE family; COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: gyc:GYMC61_1401 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: Integral membrane protein TerC; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family.


ensembl_gene_id: Sgly_0426
symbol: Sgly_0426
gene_biotype: protein_coding
description:
  COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: dsy:DSY4453 hypothetical protein; PFAM: UspA; SPTR: Putative uncharacterized protein; PFAM: Universal stress protein family.


ensembl_gene_id: Sgly_0427
symbol: Sgly_0427
gene_biotype: protein_coding
description:
  Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: dhd:Dhaf_0751 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: Putative uncharacterized protein; PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD.


ensembl_gene_id: Sgly_0428
symbol: Sgly_0428
gene_biotype: protein_coding
description:
  Amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933: IPR011650: IPR010168; KEGG: dhd:Dhaf_0758 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Putative uncharacterized protein; TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: Peptidase dimerisation domain; TIGRFAM: amidohydrolase; Belongs to the peptidase M20A family.


ensembl_gene_id: Sgly_0429
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: Sgly_0430
symbol: argJ
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: Sgly_0431
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: Sgly_0432
symbol: argD
gene_biotype: protein_coding
description:
  COGs: COG4992 Ornithine/acetylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR005814: IPR004636; KEGG: dhd:Dhaf_0772 acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine and succinylornithine aminotransferase; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransfer [...]


ensembl_gene_id: Sgly_0433
symbol: carA
gene_biotype: protein_coding
description:
  COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR002474: IPR000991: IPR006274; KEGG: dsy:DSY2043 hypothetical protein; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Putative uncharacterized protein; TIGRFAM: Carbamoyl phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.


ensembl_gene_id: Sgly_0434
symbol: carB
gene_biotype: protein_coding
description:
  COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR005481: IPR005479: IPR005480: IPR011607: IPR 006275; KEGG: dsy:DSY2042 hypothetical protein; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; PRIAM: Carbamoyl-phosphate synthase (ammonia); SPTR: Putative uncharacterized protein; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; PFAM: Carbamoyl-phosphate synthase L chain, ATP bind [...]


ensembl_gene_id: Sgly_0435
symbol: Sgly_0435
gene_biotype: protein_coding
description:
  COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: aco:Amico_1183 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aspartate transaminase; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Sgly_0438
symbol: Sgly_0438
gene_biotype: protein_coding
description:
  Phage shock protein C, PspC; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: ttm:Tthe_1095 phage shock protein C, PspC; PFAM: PspC; SPTR: Phage shock protein C, PspC; PFAM: PspC domain.


ensembl_gene_id: Sgly_0439
symbol: Sgly_0439
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG3580 conserved hypothetical protein; InterPro IPR002731: IPR018709: IPR008275; KEGG: swo:Swol_1945 putative activator of (R) -2-hydroxyglutaryl-CoA dehydratase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase, BadF/BadG/BcrA/BcrD type; SPTR: Putative activator of (R)-2-hydroxyglutaryl-coA dehydratase; TIGRFAM: CoA enzyme activase; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activ [...]


ensembl_gene_id: Sgly_0440
symbol: Sgly_0440
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family; COGs: COG3860 conserved hypothetical protein; InterPro IPR000792: IPR018656; KEGG: bcy:Bcer98_1417 hypothetical protein; PFAM: Protein of unknown function DUF2087; Transcription regulator LuxR, C-terminal; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2087); Bacterial regulatory proteins, luxR family.


ensembl_gene_id: Sgly_0443
symbol: Sgly_0443
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: Sgly_0444
symbol: argG
gene_biotype: protein_coding
description:
  COGs: COG0137 Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; InterPro IPR001518; KEGG: dhd:Dhaf_0795 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: Sgly_0445
symbol: Sgly_0445
gene_biotype: protein_coding
description:
  COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370; KEGG: dhd:Dhaf_2840 chromate transporter; PFAM: Chromate transporter region; SPTR: Putative uncharacterized protein; PFAM: Chromate transporter.


ensembl_gene_id: Sgly_0447
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein; COGs: COG0501 Zn-dependent protease with chaperone function; HAMAP: protease htpX; InterPro IPR001915; KEGG: tjr:TherJR_0554 peptidase M48 Ste24p; PFAM: Peptidase M48; SPTR: Peptidase M48 Ste24p; PFAM: Peptidase family M48; Belongs to the peptidase M48B family.


ensembl_gene_id: Sgly_0448
symbol: Sgly_0448
gene_biotype: protein_coding
description:
  Integral membrane protein, YjbE family; COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: drm:Dred_0428 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: Integral membrane protein TerC; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family.


ensembl_gene_id: Sgly_0449
symbol: argH
gene_biotype: protein_coding
description:
  COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR009049: IPR000362; KEGG: dhd:Dhaf_0796 argininosuccinate lyase; PFAM: Fumarate lyase; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase.


ensembl_gene_id: Sgly_0450
symbol: Sgly_0450
gene_biotype: protein_coding
description:
  COGs: COG5663 conserved hypothetical protein; KEGG: dhd:Dhaf_0800 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); Belongs to the 5'(3')-deoxyribonucleotidase family.


ensembl_gene_id: Sgly_0453
symbol: Sgly_0453
gene_biotype: protein_coding
description:
  COGs: COG1832 CoA-binding protein; InterPro IPR003781; KEGG: tle:Tlet_0835 CoA-binding domain-containing protein; PFAM: CoA-binding; SPTR: CoA-binding domain protein; PFAM: CoA binding domain.


ensembl_gene_id: Sgly_0454
symbol: Sgly_0454
gene_biotype: protein_coding
description:
  Signal peptidase I; InterPro IPR019759: IPR000223; KEGG: cth:Cthe_2079 thylakoidal processing peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Thylakoidal processing peptidase. Serine peptidase. MEROPS family S26A; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type.


ensembl_gene_id: Sgly_0456
symbol: Sgly_0456
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ngr:NAEGRDRAFT_80798 C2 and zinc finger domain-containing protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0457
symbol: Sgly_0457
gene_biotype: protein_coding
description:
  Protein of unknown function DUF378; COGs: COG2155 conserved hypothetical protein; InterPro IPR007211; KEGG: ccb:Clocel_1593 hypothetical protein; PFAM: Protein of unknown function DUF378; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF378).


ensembl_gene_id: Sgly_0460
symbol: Sgly_0460
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR001441; KEGG: clj:CLJU_c35470 undecaprenyl pyrophosphate synthase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase.


ensembl_gene_id: Sgly_0461
symbol: Sgly_0461
gene_biotype: protein_coding
description:
  COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: cth:Cthe_0580 aspartate aminotransferase; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Sgly_0462
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: Sgly_0465
symbol: Sgly_0465
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tva:TVAG_307050 Repeated sequence found in lipoprotein LPP containing protein; SPTR: Surface protein.


ensembl_gene_id: Sgly_0466
symbol: Sgly_0466
gene_biotype: protein_coding
description:
  Hemerythrin-like metal-binding protein; COGs: COG2703 Hemerythrin; InterPro IPR012312: IPR012827; KEGG: tte:TTE0259 hemerythrin; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain.


ensembl_gene_id: Sgly_0468
symbol: Sgly_0468
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterPro IPR003439: IPR003593; KEGG: clj:CLJU_c22150 putative molybdate ABC transporter ATPase; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative molybdate ABC transporter, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0469
symbol: Sgly_0469
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Sgly_0470
symbol: Sgly_0470
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter, periplasmic molybdate-binding protein; COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR006059: IPR005950; KEGG: ckr:CKR_2732 hypothetical protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Putative uncharacterized protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein.


ensembl_gene_id: Sgly_0471
symbol: Sgly_0471
gene_biotype: protein_coding
description:
  DNA binding domain protein, excisionase family; COGs: COG1910 Periplasmic molybdate-binding protein/domain; InterPro IPR010093; KEGG: clj:CLJU_c04890 putative molybdate-binding protein; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: Sgly_0474
symbol: Sgly_0474
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Sgly_0475
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Sgly_0476
symbol: Sgly_0476
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: ele:Elen_0372 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_0477
symbol: Sgly_0477
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: shi:Shel_13160 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Transcriptional [...]


ensembl_gene_id: Sgly_0478
symbol: Sgly_0478
gene_biotype: protein_coding
description:
  VTC domain-containing protein; InterPro IPR018966; KEGG: dhd:Dhaf_2305 hypothetical protein; PFAM: VTC domain; SPTR: VTC domain protein; PFAM: VTC domain.


ensembl_gene_id: Sgly_0481
symbol: Sgly_0481
gene_biotype: protein_coding
description:
  InterPro IPR000182; KEGG: cwo:Cwoe_5177 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0482
symbol: Sgly_0482
gene_biotype: protein_coding
description:
  InterPro IPR004518; KEGG: dhd:Dhaf_0830 MazG nucleotide pyrophosphohydrolase; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: Putative uncharacterized protein; PFAM: MazG nucleotide pyrophosphohydrolase domain.


ensembl_gene_id: Sgly_0483
symbol: dacA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein CHP00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: Sgly_0484
symbol: Sgly_0484
gene_biotype: protein_coding
description:
  YbbR family protein; COGs: COG4856 conserved hypothetical protein; InterPro IPR012505; KEGG: dsy:DSY4488 hypothetical protein; PFAM: YbbR-like; SPTR: Putative uncharacterized protein; PFAM: YbbR-like protein.


ensembl_gene_id: Sgly_0485
symbol: Sgly_0485
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR013027: IPR006076; KEGG: dhd:Dhaf_0834 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Sgly_0486
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Sgly_0487
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Sgly_0488
symbol: Sgly_0488
gene_biotype: protein_coding
description:
  COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterPro IPR003439: IPR000644: IPR005892: IPR003593; KEGG: dhd:Dhaf_2310 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core; PRIAM: Quaternary-amine-transporting ATPase; SMART: ATPase, AAA+ type, core; Cystathionine beta-synthase, core; SPTR: Putative uncharacterized protein; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit.


ensembl_gene_id: Sgly_0489
symbol: Sgly_0489
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: dhd:Dhaf_2309 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_0490
symbol: Sgly_0490
gene_biotype: protein_coding
description:
  COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: dhd:Dhaf_2308 substrate-binding region of ABC-type glycine betaine transport system; PFAM: ABC-type glycine betaine transport system, substrate-binding domain; SPTR: Putative uncharacterized protein; PFAM: Substrate binding domain of ABC-type glycine betaine transport system.


ensembl_gene_id: Sgly_0491
symbol: Sgly_0491
gene_biotype: protein_coding
description:
  Cl- channel voltage-gated family protein; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807: IPR006037; KEGG: drm:Dred_2944 Cl-channel, voltage-gated family protein; PFAM: Chloride channel, voltage gated; Regulator of K+ conductance, C-terminal; SPTR: Cl-channel, voltage-gated family protein; PFAM: Voltage gated chloride channel; TrkA-C domain.


ensembl_gene_id: Sgly_0492
symbol: Sgly_0492
gene_biotype: protein_coding
description:
  TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: toc:Toce_1400 TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain.


ensembl_gene_id: Sgly_0493
symbol: Sgly_0493
gene_biotype: protein_coding
description:
  Potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445: IPR004772; KEGG: chy:CHY_1575 potassium uptake protein KtrB; PFAM: Cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: Potassium uptake protein KtrB; TIGRFAM: Potassium uptake protein TrkH; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family.


ensembl_gene_id: Sgly_0494
symbol: Sgly_0494
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: Sgly_0495
symbol: Sgly_0495
gene_biotype: protein_coding
description:
  VanW family protein; COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007253: IPR011081: IPR007391; KEGG: dsy:DSY0772 hypothetical protein; PFAM: VanW; Bacterial Ig-related; Putative cell wall binding repeat 2; SPTR: Putative uncharacterized protein; PFAM: Putative cell wall binding repeat 2; Bacterial Ig-like domain (group 4); VanW like protein.


ensembl_gene_id: Sgly_0496
symbol: Sgly_0496
gene_biotype: protein_coding
description:
  COGs: COG2302 conserved hypothetical protein contains S4-like domain; InterPro IPR002942; KEGG: cth:Cthe_0789 RNA-binding S4; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: Putative uncharacterized protein; PFAM: S4 domain.


ensembl_gene_id: Sgly_0497
symbol: Sgly_0497
gene_biotype: protein_coding
description:
  NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR002477: IPR000064; KEGG: dhd:Dhaf_2683 NLP/P60 protein; PFAM: NLP/P60; Peptidoglycan binding-like; SPTR: Putative uncharacterized protein; PFAM: NlpC/P60 family; Putative peptidoglycan binding domain.


ensembl_gene_id: Sgly_0498
symbol: Sgly_0498
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: toc:Toce_1455 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_0499
symbol: Sgly_0499
gene_biotype: protein_coding
description:
  COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003660: IPR003661: IPR003594; KEGG: toc:Toce_1454 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Multi-sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; H [...]


ensembl_gene_id: Sgly_0500
symbol: Sgly_0500
gene_biotype: protein_coding
description:
  COGs: COG1613 ABC-type sulfate transport system periplasmic component; InterPro IPR006059: IPR005669; KEGG: dhd:Dhaf_4118 sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein.


ensembl_gene_id: Sgly_0501
symbol: Sgly_0501
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: Sgly_0502
symbol: Sgly_0502
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, inner membrane subunit CysW; COGs: COG4208 ABC-type sulfate transport system permease component; InterPro IPR000515: IPR005667: IPR011866; KEGG: dhd:Dhaf_4116 sulfate ABC transporter, inner membrane subunit CysW; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permea [...]


ensembl_gene_id: Sgly_0503
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Sgly_0504
symbol: Sgly_0504
gene_biotype: protein_coding
description:
  ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: dhd:Dhaf_4114 ROK family protein; PFAM: ROK; SPTR: ROK family protein; PFAM: ROK family.


ensembl_gene_id: Sgly_0506
symbol: Sgly_0506
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 2; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: dhd:Dhaf_4112 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulfate reductase family.


ensembl_gene_id: Sgly_0507
symbol: Sgly_0507
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: Sgly_0508
symbol: Sgly_0508
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; InterPro IPR003749: IPR010035; KEGG: cth:Cthe_2538 thiamine biosynthesis protein ThiS; PFAM: ThiamineS; SPTR: Thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS.


ensembl_gene_id: Sgly_0509
symbol: Sgly_0509
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594: IPR007901; KEGG: cth:Cthe_2539 UBA/ThiF-type NAD/FAD binding fold; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: UBA/THIF-type NAD/FAD binding fold; PFAM: MoeZ/MoeB domain; ThiF family.


ensembl_gene_id: Sgly_0510
symbol: Sgly_0510
gene_biotype: protein_coding
description:
  Mov34/MPN/PAD-1 family protein; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: csc:Csac_1636 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family.


ensembl_gene_id: Sgly_0511
symbol: Sgly_0511
gene_biotype: protein_coding
description:
  Nitrite and sulphite reductase 4Fe-4S region; COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterPro IPR005117: IPR006067; KEGG: cth:Cthe_2541 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; SPTR: Nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.


ensembl_gene_id: Sgly_0512
symbol: Sgly_0512
gene_biotype: protein_coding
description:
  SirA-like domain-containing protein; InterPro IPR001455; KEGG: dhd:Dhaf_4106 SirA family protein; PFAM: SirA-like; SPTR: Putative uncharacterized protein; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Sgly_0513
symbol: Sgly_0513
gene_biotype: protein_coding
description:
  Cysteine synthase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277; KEGG: ttm:Tthe_1589 cysteine synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.


ensembl_gene_id: Sgly_0514
symbol: Sgly_0514
gene_biotype: protein_coding
description:
  COGs: COG0348 Polyferredoxin; KEGG: dhd:Dhaf_2488 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Sgly_0516
symbol: Sgly_0516
gene_biotype: protein_coding
description:
  COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: dsy:DSY2227 putative precorrin-2 oxidase; SPTR: Putative precorrin-2 oxidase; TIGRFAM: Sirohaem synthase, N-terminal; PFAM: Sirohaem synthase dimerisation region; TIGRFAM: siroheme synthase, N-terminal domain.


ensembl_gene_id: Sgly_0517
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Sgly_0518
symbol: Sgly_0518
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: amt:Amet_4400 XRE family plasmid maintenance system antidote protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Phage transcriptional regulator; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_0521
symbol: Sgly_0521
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: cac:CA_C3639 CRO repressor-like DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: CRO repressor-like DNA-binding protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_0522
symbol: Sgly_0522
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tva:TVAG_193760 DNA-directed RNA polymerase, omega subunit family protein; SPTR: DNA-directed RNA polymerase, omega subunit family protein.


ensembl_gene_id: Sgly_0523
symbol: Sgly_0523
gene_biotype: protein_coding
description:
  Transposase-like Mu; InterPro IPR001584: IPR015378; KEGG: amt:Amet_0388 transposase; PFAM: Transposase-like, Mu, C-terminal; Integrase, catalytic core; SPTR: Mu transposase, C-superfamily; PFAM: Mu transposase, C-terminal; Bacteriophage Mu transposase.


ensembl_gene_id: Sgly_0524
symbol: Sgly_0524
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COGs: COG2842 Uncharacterized ATPase putative transposase; KEGG: amt:Amet_4393 hypothetical protein; SPTR: Uncharacterized ATPase, putative transposase; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_0525
symbol: Sgly_0525
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tel:tlr1124 putative branched chain ABC transporter ATP-binding protein; SPTR: GTP-binding protein engA.


ensembl_gene_id: Sgly_0526
symbol: Sgly_0526
gene_biotype: protein_coding
description:
  KEGG: mca:MCA2948 prophage MuMc02, host-nuclease inhibitor protein; SPTR: Bacteriophage Mu Gam like protein; PFAM: Bacteriophage Mu Gam like protein.


ensembl_gene_id: Sgly_0527
symbol: Sgly_0527
gene_biotype: protein_coding
description:
  KEGG: amt:Amet_4387 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1018).


ensembl_gene_id: Sgly_0528
symbol: Sgly_0528
gene_biotype: protein_coding
description:
  KEGG: bsb:Bresu_2241 ribosomal protein S21; SPTR: Toxin-antitoxin system, toxin component, RelE family.


ensembl_gene_id: Sgly_0529
symbol: Sgly_0529
gene_biotype: protein_coding
description:
  Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: cno:NT01CX_2058 hypothetical protein; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; N-acetylmuramoyl-L-alanine amidase.


ensembl_gene_id: Sgly_0530
symbol: Sgly_0530
gene_biotype: protein_coding
description:
  Mor transcription activator domain protein; InterPro IPR014875; KEGG: amt:Amet_4373 hypothetical protein; PFAM: Mor transcription activator; SPTR: Mor transcription activator family; PFAM: Mor transcription activator family.


ensembl_gene_id: Sgly_0534
symbol: Sgly_0534
gene_biotype: protein_coding
description:
  KEGG: amt:Amet_1950 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3486).


ensembl_gene_id: Sgly_0535
symbol: Sgly_0535
gene_biotype: protein_coding
description:
  Phage uncharacterized protein; InterPro IPR006517; KEGG: dae:Dtox_4228 phage uncharacterized protein; SPTR: Putative uncharacterized protein; TIGRFAM: Phage uncharacterised protein, C-terminal; PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain.


ensembl_gene_id: Sgly_0536
symbol: Sgly_0536
gene_biotype: protein_coding
description:
  Protein of unknown function DUF935; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: sat:SYN_02303 Mu-like prophage FluMu protein GP29; PFAM: Protein of unknown function DUF935; SPTR: Phage head morphogenesis protein; PFAM: Protein of unknown function (DUF935).


ensembl_gene_id: Sgly_0537
symbol: Sgly_0537
gene_biotype: protein_coding
description:
  Phage head morphogenesis protein, SPP1 gp7 family; COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30; InterPro IPR006528; KEGG: dvu:DVU1119 virion morphogenesis protein; PFAM: Phage putative head morphogenesis protein, SPP1 gp7; SPTR: Phage putative head morphogenesis protein, SPP1 gp7 family; TIGRFAM: Phage putative head morphogenesis protein, SPP1 gp7; PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.


ensembl_gene_id: Sgly_0538
symbol: Sgly_0538
gene_biotype: protein_coding
description:
  COGs: COG4388 Mu-like prophage I protein; InterPro IPR019295; KEGG: sat:SYN_02300 Mu-like prophage FluMu I protein; PFAM: Mu-like prophage I protein; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage I protein.


ensembl_gene_id: Sgly_0540
symbol: Sgly_0540
gene_biotype: protein_coding
description:
  COGs: COG4397 Mu-like prophage major head subunit gpT; KEGG: ecg:E2348C_2664 predicted major head subunit protein; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage major head subunit gpT.


ensembl_gene_id: Sgly_0541
symbol: Sgly_0541
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1320; COGs: COG4387 Mu-like prophage protein gp36; InterPro IPR009752; KEGG: sat:SYN_02296 Mu-like prophage FluMu protein GP36; PFAM: Protein of unknown function DUF1320; SPTR: Predicted protein; PFAM: Protein of unknown function (DUF1320).


ensembl_gene_id: Sgly_0542
symbol: Sgly_0542
gene_biotype: protein_coding
description:
  COGs: COG5005 Mu-like prophage protein gpG; InterPro IPR006522; KEGG: dde:Dde_3379 phage virion morphogenesis (putative tail completion) protein; SPTR: Phage virion morphogeneis protein; TIGRFAM: Phage virion morphogenesis (putative tail completion) protein; PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein.


ensembl_gene_id: Sgly_0545
symbol: Sgly_0545
gene_biotype: protein_coding
description:
  KEGG: mrb:Mrub_1955 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2586).


ensembl_gene_id: Sgly_0550
symbol: Sgly_0550
gene_biotype: protein_coding
description:
  InterPro IPR010090; KEGG: dde:Dde_0934 phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region; SPTR: Phage tail tape measure protein core region; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.


ensembl_gene_id: Sgly_0555
symbol: Sgly_0555
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; KEGG: pmx:PERMA_1809 hypothetical protein; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.


ensembl_gene_id: Sgly_0559
symbol: Sgly_0559
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ath:AT4G04695 CPK31; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase; SPTR: Predicted protein.


ensembl_gene_id: Sgly_0561
symbol: Sgly_0561
gene_biotype: protein_coding
description:
  InterPro IPR000477; KEGG: drm:Dred_1227 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (reverse transcriptase); SPTR: RNA-directed DNA polymerase; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).


ensembl_gene_id: Sgly_0563
symbol: Sgly_0563
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ecb:100063098 RUN and FYVE domain containing 2; SPTR: Transcription factor.


ensembl_gene_id: Sgly_0566
symbol: Sgly_0566
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158: IPR007197: IPR006638; KEGG: pca:Pcar_1134 putative Fe-S oxidoreductase; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.


ensembl_gene_id: Sgly_0567
symbol: Sgly_0567
gene_biotype: protein_coding
description:
  Methyltransferase FkbM family; InterPro IPR006342; KEGG: dhd:Dhaf_4179 methyltransferase FkbM family; SPTR: Methyltransferase FkbM family; TIGRFAM: Methyltransferase FkbM; TIGRFAM: methyltransferase, FkbM family.


ensembl_gene_id: Sgly_0568
symbol: Sgly_0568
gene_biotype: protein_coding
description:
  Methyltransferase FkbM family; InterPro IPR006342; KEGG: dhd:Dhaf_4174 methyltransferase FkbM family; SPTR: Methyltransferase FkbM family; TIGRFAM: Methyltransferase FkbM; TIGRFAM: methyltransferase, FkbM family.


ensembl_gene_id: Sgly_0569
symbol: Sgly_0569
gene_biotype: protein_coding
description:
  COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: dhd:Dhaf_4180 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Sgly_0570
symbol: Sgly_0570
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: cth:Cthe_2556 radical SAM family protein; PFAM: Radical SAM; SPTR: Radical SAM family protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Sgly_0571
symbol: Sgly_0571
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: cth:Cthe_2552 radical SAM family protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Sgly_0572
symbol: Sgly_0572
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: dhd:Dhaf_4175 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Sgly_0573
symbol: Sgly_0573
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cth:Cthe_2554 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Sgly_0574
symbol: Sgly_0574
gene_biotype: protein_coding
description:
  CDP-glucose 4,6-dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR013445; KEGG: pru:PRU_0435 CDP-D-glucose-4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: CDP-glucose 4,6-dehydratase; SPTR: CDP-glucose 4,6-dehydratase; TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase.


ensembl_gene_id: Sgly_0575
symbol: Sgly_0575
gene_biotype: protein_coding
description:
  InterPro IPR007412; KEGG: dsy:DSY3030 hypothetical protein; PFAM: Anti-sigma-28 factor, FlgM; SPTR: Putative uncharacterized protein; TIGRFAM: Anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM.


ensembl_gene_id: Sgly_0576
symbol: Sgly_0576
gene_biotype: protein_coding
description:
  FlgN family protein; InterPro IPR007809; KEGG: dhd:Dhaf_4196 FlgN family protein; PFAM: FlgN; SPTR: Putative uncharacterized protein; PFAM: FlgN protein.


ensembl_gene_id: Sgly_0577
symbol: flgK
gene_biotype: protein_coding
description:
  COGs: COG1256 Flagellar hook-associated protein; InterPro IPR001444: IPR010930: IPR002371; KEGG: dsy:DSY3028 hypothetical protein; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK.


ensembl_gene_id: Sgly_0578
symbol: Sgly_0578
gene_biotype: protein_coding
description:
  COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492: IPR001029: IPR013384; KEGG: dsy:DSY3027 hypothetical protein; PFAM: Flagellin, N-terminal; Flagellin, C-terminal helical region; SPTR: Putative uncharacterized protein; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3.


ensembl_gene_id: Sgly_0579
symbol: Sgly_0579
gene_biotype: protein_coding
description:
  KEGG: pjd:Pjdr2_5762 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Sgly_0580
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: Sgly_0581
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: Sgly_0583
symbol: Sgly_0583
gene_biotype: protein_coding
description:
  Glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835: IPR013446; KEGG: dhd:Dhaf_4187 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate cytidylyltransferase; SPTR: Glucose-1-phosphate cytidylyltransferase; TIGRFAM: Glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase.


ensembl_gene_id: Sgly_0584
symbol: Sgly_0584
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173: IPR001440: IPR019734; KEGG: aar:Acear_0254 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; Tetratricopeptide TPR-1; SPTR: Glycosyl transferase family 2; PFAM: Tetratricopeptide repeat; Glycosyl transferase family 2.


ensembl_gene_id: Sgly_0585
symbol: Sgly_0585
gene_biotype: protein_coding
description:
  Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Sgly_0586
symbol: Sgly_0586
gene_biotype: protein_coding
description:
  COGs: COG1334 Uncharacterized flagellar protein FlaG; InterPro IPR005186; KEGG: dhd:Dhaf_4161 flagellar protein FlaG protein; PFAM: Flagellar protein FlaG protein; SPTR: Flagellar protein FlaG protein; PFAM: FlaG protein.


ensembl_gene_id: Sgly_0587
symbol: Sgly_0587
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Sgly_0588
symbol: Sgly_0588
gene_biotype: protein_coding
description:
  Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: aar:Acear_0257 Hpt protein; PFAM: Flagellar protein FliS; SPTR: Hpt protein; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS.


ensembl_gene_id: Sgly_0589
symbol: Sgly_0589
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tva:TVAG_458090 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein, putative.


ensembl_gene_id: Sgly_0590
symbol: Sgly_0590
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207: IPR010808: IPR004105: IPR003594: IPR 002545; KEGG: dhd:Dhaf_4155 CheA signal transduction histidine kinase; PFAM: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, P2 response regulator-binding; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; A [...]


ensembl_gene_id: Sgly_0591
symbol: Sgly_0591
gene_biotype: protein_coding
description:
  CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: dhd:Dhaf_4154 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: Putative uncharacterized protein; PFAM: CheW-like domain.


ensembl_gene_id: Sgly_0592
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Sgly_0593
symbol: Sgly_0593
gene_biotype: protein_coding
description:
  COGs: COG1558 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR006299; KEGG: dhd:Dhaf_4152 flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: Sgly_0594
symbol: fliE
gene_biotype: protein_coding
description:
  COGs: COG1677 Flagellar hook-basal body protein; HAMAP: Flagellar hook-basal body complex protein FliE; InterPro IPR001624; KEGG: dsy:DSY2990 hypothetical protein; PFAM: Flagellar hook-basal body complex protein FliE; SPTR: Flagellar hook-basal body complex protein fliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.


ensembl_gene_id: Sgly_0595
symbol: Sgly_0595
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Sgly_0596
symbol: Sgly_0596
gene_biotype: protein_coding
description:
  COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: dhd:Dhaf_4149 flagellar motor switch protein G; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.


ensembl_gene_id: Sgly_0597
symbol: Sgly_0597
gene_biotype: protein_coding
description:
  InterPro IPR018035; KEGG: dhd:Dhaf_4148 flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: Flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH.


ensembl_gene_id: Sgly_0598
symbol: Sgly_0598
gene_biotype: protein_coding
description:
  Type III secretion system ATPase, FliI/YscN; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR004100: IPR000194: IPR005714: IPR003593; KEGG: dsy:DSY2986 hypothetical protein; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: flagellar protein export ATPase FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATP synthase alpha/beta family [...]


ensembl_gene_id: Sgly_0599
symbol: Sgly_0599
gene_biotype: protein_coding
description:
  KEGG: dsy:DSY2985 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ.


ensembl_gene_id: Sgly_0600
symbol: Sgly_0600
gene_biotype: protein_coding
description:
  Flagellar FlbD family protein; COGs: COG1582 Uncharacterized protein possibly involved in motility; InterPro IPR009384; KEGG: dhd:Dhaf_4145 flagellar FlbD family protein; PFAM: Flagellar; SPTR: Putative uncharacterized protein; PFAM: Flagellar protein (FlbD).


ensembl_gene_id: Sgly_0601
symbol: Sgly_0601
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Sgly_0602
symbol: Sgly_0602
gene_biotype: protein_coding
description:
  COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: dhd:Dhaf_4143 flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.


ensembl_gene_id: Sgly_0603
symbol: Sgly_0603
gene_biotype: protein_coding
description:
  COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597: IPR001543: IPR012826; KEGG: dhd:Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: Surface presentation of antigen (SpoA); CheC-like protein; SPTR: CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliN.


ensembl_gene_id: Sgly_0604
symbol: Sgly_0604
gene_biotype: protein_coding
description:
  COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: dhd:Dhaf_4140 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Sgly_0605
symbol: Sgly_0605
gene_biotype: protein_coding
description:
  KEGG: dsy:DSY2979 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO.


ensembl_gene_id: Sgly_0606
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Sgly_0607
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Sgly_0608
symbol: Sgly_0608
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Sgly_0609
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Sgly_0610
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Sgly_0611
symbol: Sgly_0611
gene_biotype: protein_coding
description:
  COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897: IPR020006: IPR003593; KEGG: dhd:Dhaf_4133 GTP-binding signal recognition particle SRP54 G-domain protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF.


ensembl_gene_id: Sgly_0612
symbol: Sgly_0612
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: dsy:DSY2972 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Sgly_0613
symbol: Sgly_0613
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; COGs: COG5581 glycosyltransferase; InterPro IPR009875; KEGG: dhd:Dhaf_4131 type IV pilus assembly PilZ; PFAM: Type IV pilus assembly PilZ; SPTR: Type IV pilus assembly PilZ; PFAM: PilZ domain.


ensembl_gene_id: Sgly_0614
symbol: Sgly_0614
gene_biotype: protein_coding
description:
  COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: dhd:Dhaf_4130 CheC, inhibitor of MCP methylation; PFAM: CheC-like protein; SPTR: Putative uncharacterized protein; PFAM: CheC-like family.


ensembl_gene_id: Sgly_0615
symbol: cheD
gene_biotype: protein_coding
description:
  CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Sgly_0617
symbol: Sgly_0617
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterPro IPR007627: IPR007624: IPR007630: IPR014284: IPR 012845; KEGG: dhd:Dhaf_4127 RNA polymerase, sigma 28 subunit, FliA/WhiG; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA po [...]


ensembl_gene_id: Sgly_0618
symbol: Sgly_0618
gene_biotype: protein_coding
description:
  InterPro IPR021136; KEGG: dhd:Dhaf_4126 flagellar hook-length control protein; PFAM: Flagellar hook-length control protein-like, C-terminal domain; SPTR: Flagellar hook-length control protein; PFAM: Flagellar hook-length control protein FliK.


ensembl_gene_id: Sgly_0619
symbol: Sgly_0619
gene_biotype: protein_coding
description:
  COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: tjr:TherJR_1535 flagellar hook capping protein; PFAM: Flagellar hook capping protein; SPTR: Flagellar hook capping protein; PFAM: Flagellar hook capping protein.


ensembl_gene_id: Sgly_0620
symbol: Sgly_0620
gene_biotype: protein_coding
description:
  COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR020013; KEGG: dsy:DSY2964 hypothetical protein; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Sgly_0621
symbol: Sgly_0621
gene_biotype: protein_coding
description:
  COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR020013; KEGG: ddf:DEFDS_2152 flagellar basal-body rod protein FlgG; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Sgly_0622
symbol: Sgly_0622
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Sgly_0623
symbol: Sgly_0623
gene_biotype: protein_coding
description:
  COGs: COG4786 Flagellar basal body rod protein; InterPro IPR010930: IPR020013; KEGG: dsy:DSY2961 hypothetical protein; PFAM: Protein of unknown function DUF1078, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: Sgly_0626
symbol: Sgly_0626
gene_biotype: protein_coding
description:
  COGs: COG4862 Negative regulator of genetic competence sporulation and motility; InterPro IPR008681; KEGG: dhd:Dhaf_4102 negative regulator of genetic competence; PFAM: Negative regulator of genetic competence; SPTR: Negative regulator of genetic competence; PFAM: Negative regulator of genetic competence (MecA).


ensembl_gene_id: Sgly_0627
symbol: Sgly_0627
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cby:CLM_2558 transcriptional regulator, AbrB family; SPTR: Transcriptional regulator, AbrB family.


ensembl_gene_id: Sgly_0628
symbol: Sgly_0628
gene_biotype: protein_coding
description:
  Cell envelope-related transcriptional attenuator; COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: dsy:DSY2942 hypothetical protein; PFAM: Cell envelope-related transcriptional attenuator; SPTR: Putative uncharacterized protein; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.


ensembl_gene_id: Sgly_0629
symbol: Sgly_0629
gene_biotype: protein_coding
description:
  Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: dhd:Dhaf_4099 protein of unknown function DUF342; PFAM: Protein of unknown function DUF342; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).


ensembl_gene_id: Sgly_0630
symbol: Sgly_0630
gene_biotype: protein_coding
description:
  Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: dhd:Dhaf_4088 peptidase U62 modulator of DNA gyrase; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase.


ensembl_gene_id: Sgly_0631
symbol: Sgly_0631
gene_biotype: protein_coding
description:
  Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: dsy:DSY2930 hypothetical protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: Putative uncharacterized protein; PFAM: Putative modulator of DNA gyrase.


ensembl_gene_id: Sgly_0632
symbol: Sgly_0632
gene_biotype: protein_coding
description:
  COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013: IPR010140; KEGG: dhd:Dhaf_4086 histidinol phosphate phosphatase HisJ family; PFAM: PHP, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Histidinol phosphate phosphatase, HisJ; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: Sgly_0634
symbol: Sgly_0634
gene_biotype: protein_coding
description:
  Ferridoxin; KEGG: sat:SYN_03059 ferridoxin; SPTR: Putative uncharacterized protein; PFAM: 4Fe-4S binding domain.


ensembl_gene_id: Sgly_0635
symbol: Sgly_0635
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dhd:Dhaf_4078 ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; SPTR: Putative uncharacterized protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: Sgly_0636
symbol: Sgly_0636
gene_biotype: protein_coding
description:
  Beta-galactosidase/beta-glucuronidase-like protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; KEGG: dhd:Dhaf_4077 beta-galactosidase/beta-glucuronidase-like protein; SPTR: Putative uncharacterized protein; PFAM: domain.


ensembl_gene_id: Sgly_0637
symbol: Sgly_0637
gene_biotype: protein_coding
description:
  InterPro IPR015077; KEGG: dhd:Dhaf_4076 domain of unknown function DUF1858; PFAM: Domain of unknown function DUF1858; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1858).


ensembl_gene_id: Sgly_0638
symbol: Sgly_0638
gene_biotype: protein_coding
description:
  Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: tpd:Teth39_0705 patatin; PFAM: Patatin; SPTR: Patatin; PFAM: Patatin-like phospholipase.


ensembl_gene_id: Sgly_0639
symbol: mraZ
gene_biotype: protein_coding
description:
  Protein mraZ; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR020603: IPR003444; KEGG: dsy:DSY2916 cell division protein MraZ; PFAM: MraZ domain; SPTR: Protein mraZ; TIGRFAM: MraZ; PFAM: MraZ protein; TIGRFAM: mraZ protein; Belongs to the MraZ family.


ensembl_gene_id: Sgly_0640
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Sgly_0641
symbol: Sgly_0641
gene_biotype: protein_coding
description:
  Septum formation initiator; InterPro IPR007060; KEGG: dhd:Dhaf_4070 septum formation initiator; PFAM: Septum formation initiator; SPTR: Septum formation initiator; PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL.


ensembl_gene_id: Sgly_0642
symbol: Sgly_0642
gene_biotype: protein_coding
description:
  COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005543: IPR005311: IPR001460: IPR011927; KEGG: dhd:Dhaf_4069 stage V sporulation protein D; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA; SPTR: Stage V sporulation protein D; TIGRFAM: Stage V sporulation protein D; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D.


ensembl_gene_id: Sgly_0643
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Sgly_0644
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Sgly_0645
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Sgly_0646
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Sgly_0647
symbol: Sgly_0647
gene_biotype: protein_coding
description:
  Cell division-specific peptidoglycan biosynthesis regulator FtsW; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182: IPR013437; KEGG: dsy:DSY2908 hypothetical protein; PFAM: Cell cycle protein; SPTR: Putative uncharacterized protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW; Belongs to the SEDS family.


ensembl_gene_id: Sgly_0648
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Sgly_0650
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Sgly_0652
symbol: Sgly_0652
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1290; COGs: COG3856 conserved hypothetical protein (small basic protein); InterPro IPR009709; KEGG: dhd:Dhaf_4058 protein of unknown function DUF1290; PFAM: Protein of unknown function DUF1290; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1290).


ensembl_gene_id: Sgly_0653
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Sgly_0654
symbol: Sgly_0654
gene_biotype: protein_coding
description:
  Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: Sgly_0655
symbol: Sgly_0655
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Sgly_0656
symbol: Sgly_0656
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Sgly_0657
symbol: Sgly_0657
gene_biotype: protein_coding
description:
  Sporulation protein, YlmC/YmxH family; InterPro IPR007903: IPR014238; KEGG: dsy:DSY2893 hypothetical protein; PFAM: PRC-barrel; SPTR: Putative uncharacterized protein; TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family.


ensembl_gene_id: Sgly_0658
symbol: Sgly_0658
gene_biotype: protein_coding
description:
  Multi-copper polyphenol oxidoreductase, laccase; COGs: COG1496 conserved hypothetical protein; InterPro IPR003730; KEGG: dhd:Dhaf_4051 protein of unknown function DUF152; PFAM: Multi-copper polyphenol oxidoreductase, laccase; SPTR: Putative uncharacterized protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: Sgly_0659
symbol: Sgly_0659
gene_biotype: protein_coding
description:
  KEGG: dsy:DSY2889 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane fusion protein.


ensembl_gene_id: Sgly_0660
symbol: Sgly_0660
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Sgly_0661
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: Sgly_0662
symbol: Sgly_0662
gene_biotype: protein_coding
description:
  InterPro IPR003425; KEGG: dhd:Dhaf_4045 protein of unknown function YGGT; PFAM: Protein of unknown function YGGT; SPTR: Putative uncharacterized protein; PFAM: YGGT family.


ensembl_gene_id: Sgly_0663
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Sgly_0665
symbol: Sgly_0665
gene_biotype: protein_coding
description:
  InterPro IPR002934; KEGG: ttm:Tthe_0676 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Sgly_0666
symbol: Sgly_0666
gene_biotype: protein_coding
description:
  HEPN domain protein; COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN; InterPro IPR007842; KEGG: ttm:Tthe_0675 HEPN domain protein; PFAM: HEPN; SMART: HEPN; SPTR: HEPN domain protein; manually curated; PFAM: HEPN domain.


ensembl_gene_id: Sgly_0667
symbol: Sgly_0667
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: dhd:Dhaf_4040 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative uncharacterized protein; PFAM: Putative sugar diacid recognition; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_0668
symbol: Sgly_0668
gene_biotype: protein_coding
description:
  N-carbamoylputrescine amidase; COGs: COG0388 amidohydrolase; InterPro IPR003010: IPR017755; KEGG: cbe:Cbei_1921 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PRIAM: N-carbamoylputrescine amidase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; TIGRFAM: N-carbamoylputrescine amidase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase.


ensembl_gene_id: Sgly_0669
symbol: Sgly_0669
gene_biotype: protein_coding
description:
  Agmatine deiminase; COGs: COG2957 Peptidylarginine deiminase; InterPro IPR007466; KEGG: cbe:Cbei_1922 agmatine deiminase; PFAM: Peptidyl-arginine deiminase, Porphyromonas-type; PRIAM: Agmatine deiminase; SPTR: Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase; Belongs to the agmatine deiminase family.


ensembl_gene_id: Sgly_0670
symbol: comB
gene_biotype: protein_coding
description:
  2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; HAMAP: 2-phosphosulfolactate phosphatase; InterPro IPR005238; KEGG: sth:STH1711 hypothetical protein; PFAM: 2-phosphosulpholactate phosphatase; SPTR: Probable 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase; Belongs to the ComB family.


ensembl_gene_id: Sgly_0671
symbol: Sgly_0671
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: Sgly_0672
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Sgly_0673
symbol: Sgly_0673
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Sgly_0674
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional protein pyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: Sgly_0675
symbol: pyrB
gene_biotype: protein_coding
description:
  COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase, eukaryotic; InterPro IPR006132: IPR006131: IPR002082; KEGG: dhd:Dhaf_4019 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbam [...]


ensembl_gene_id: Sgly_0676
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: Sgly_0677
symbol: carA-2
gene_biotype: protein_coding
description:
  COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR002474: IPR000991: IPR006274; KEGG: dhd:Dhaf_4017 carbamoyl-phosphate synthase, small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl phosphate synthase, small subunit, N-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit [...]


ensembl_gene_id: Sgly_0678
symbol: carB-2
gene_biotype: protein_coding
description:
  COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR005481: IPR005479: IPR005480: IPR011607: IPR 006275; KEGG: dsy:DSY2859 hypothetical protein; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; PRIAM: Carbamoyl-phosphate synthase (ammonia); SPTR: Putative uncharacterized protein; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; PFAM: Carbamoyl-phosphate synthase L chain, ATP bind [...]


ensembl_gene_id: Sgly_0679
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: Sgly_0681
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: Sgly_0682
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Sgly_0684
symbol: Sgly_0684
gene_biotype: protein_coding
description:
  Accessory gene regulator B; InterPro IPR006741; KEGG: dhd:Dhaf_0915 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; SPTR: Accessory gene regulator B; manually curated; PFAM: Accessory gene regulator B.


ensembl_gene_id: Sgly_0686
symbol: Sgly_0686
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR003661: IPR003594: IPR013656; KEGG: dsy:DSY4412 hypothetical protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold.


ensembl_gene_id: Sgly_0687
symbol: Sgly_0687
gene_biotype: protein_coding
description:
  COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616: IPR008532; KEGG: dsy:DSY2750 hypothetical protein; PFAM: Fibronectin-binding A, N-terminal; Protein of unknown function DUF814; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA).


ensembl_gene_id: Sgly_0688
symbol: Sgly_0688
gene_biotype: protein_coding
description:
  ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterPro IPR004014: IPR008250: IPR005834: IPR006068: IPR 001757; KEGG: dsy:DSY2749 hypothetical protein; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Calcium-transporting ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation  [...]


ensembl_gene_id: Sgly_0689
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Sgly_0690
symbol: Sgly_0690
gene_biotype: protein_coding
description:
  Conserved hypothetical protein CHP00255; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527: IPR013551: IPR005229; KEGG: dsy:DSY2731 hypothetical protein; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255.


ensembl_gene_id: Sgly_0691
symbol: Sgly_0691
gene_biotype: protein_coding
description:
  UPF0296 protein; COGs: COG2052 conserved hypothetical protein; HAMAP: UPF0296 protein; InterPro IPR007169; KEGG: dhd:Dhaf_3895 hypothetical protein; PFAM: Protein of unknown function DUF370; SPTR: UPF0296 protein Dhaf_3895; PFAM: Domain of unknown function (DUF370); Belongs to the RemA family.


ensembl_gene_id: Sgly_0693
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Sgly_0694
symbol: Sgly_0694
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Sgly_0695
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Sgly_0697
symbol: Sgly_0697
gene_biotype: protein_coding
description:
  COGs: COG4747 ACT domain-containing protein; InterPro IPR002912; KEGG: aar:Acear_1789 ACT domain protein; PFAM: Amino acid-binding ACT; SPTR: ACT domain protein; PFAM: ACT domain.


ensembl_gene_id: Sgly_0699
symbol: Sgly_0699
gene_biotype: protein_coding
description:
  COGs: COG3546 Mn-containing catalase; InterPro IPR007760; KEGG: dhd:Dhaf_1481 manganese containing catalase; PFAM: Catalase, manganese; SPTR: Putative uncharacterized protein; PFAM: Manganese containing catalase.


ensembl_gene_id: Sgly_0700
symbol: Sgly_0700
gene_biotype: protein_coding
description:
  COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: cbi:CLJ_B0418 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V; PFAM: Aminotransferase class-V.


ensembl_gene_id: Sgly_0701
symbol: Sgly_0701
gene_biotype: protein_coding
description:
  COGs: COG2210 conserved hypothetical protein; KEGG: aoe:Clos_0404 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0702
symbol: Sgly_0702
gene_biotype: protein_coding
description:
  COGs: COG0372 Citrate synthase; InterPro IPR002020; KEGG: dhd:Dhaf_0903 citrate synthase; PFAM: Citrate synthase-like; SPTR: Putative uncharacterized protein; PFAM: Citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: Sgly_0704
symbol: Sgly_0704
gene_biotype: protein_coding
description:
  PRC-barrel domain protein; COGs: COG3881 conserved hypothetical protein; InterPro IPR007903; KEGG: dhd:Dhaf_3061 hypothetical protein; PFAM: PRC-barrel; SPTR: Putative uncharacterized protein; PFAM: PRC-barrel domain.


ensembl_gene_id: Sgly_0705
symbol: Sgly_0705
gene_biotype: protein_coding
description:
  VanW family protein; COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391; KEGG: dhd:Dhaf_3060 VanW family protein; PFAM: VanW; SPTR: Putative uncharacterized protein; PFAM: VanW like protein.


ensembl_gene_id: Sgly_0707
symbol: Sgly_0707
gene_biotype: protein_coding
description:
  TrpR like protein, YerC/YecD; COGs: COG4496 conserved hypothetical protein; InterPro IPR000831: IPR013368; KEGG: dhd:Dhaf_1488 TrpR like protein, YerC/YecD; PFAM: Trp repressor; SPTR: Putative uncharacterized protein; TIGRFAM: TrpR homologue YerC/YecD; PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD.


ensembl_gene_id: Sgly_0708
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: Sgly_0709
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: Sgly_0710
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: Sgly_0711
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Sgly_0712
symbol: hisC
gene_biotype: protein_coding
description:
  COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839: IPR005861; KEGG: dhd:Dhaf_1493 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate amino [...]


ensembl_gene_id: Sgly_0713
symbol: hisB
gene_biotype: protein_coding
description:
  COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807; KEGG: dhd:Dhaf_1494 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase.


ensembl_gene_id: Sgly_0714
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Sgly_0715
symbol: hisA
gene_biotype: protein_coding
description:
  COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; InterPro IPR006062: IPR006063; KEGG: dhd:Dhaf_1496 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide i [...]


ensembl_gene_id: Sgly_0716
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Sgly_0717
symbol: hisI
gene_biotype: protein_coding
description:
  Phosphoribosyl-ATP pyrophosphatase; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase; Histidine biosynthesis bifunctional protein hisIE; InterPro IPR002496: IPR021130: IPR008179; KEGG: dhd:Dhaf_1498 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; PRIAM: Phosphoribosyl-AMP cyclohydrolase., Phosphoribosyl-ATP diphosphatase; SPTR: Putative uncharacterized protein; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribo [...]


ensembl_gene_id: Sgly_0718
symbol: Sgly_0718
gene_biotype: protein_coding
description:
  InterPro IPR004518; KEGG: dhd:Dhaf_4426 MazG nucleotide pyrophosphohydrolase; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: Putative uncharacterized protein; PFAM: MazG nucleotide pyrophosphohydrolase domain.


ensembl_gene_id: Sgly_0719
symbol: Sgly_0719
gene_biotype: protein_coding
description:
  COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212: IPR005751; KEGG: dsy:DSY3891 hypothetical protein; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein; TIGRFAM: DNA helicase, ATP-dependent, PcrA type; PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA.


ensembl_gene_id: Sgly_0720
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: Sgly_0721
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; COGs: COG0837 Glucokinase; InterPro IPR003836; KEGG: dsy:DSY2007 hypothetical protein; PFAM: Glucokinase; SPTR: Putative uncharacterized protein; TIGRFAM: Glucokinase; PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type.


ensembl_gene_id: Sgly_0722
symbol: Sgly_0722
gene_biotype: protein_coding
description:
  Beta-phosphoglucomutase; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834: IPR010972: IPR010976: IPR006402; KEGG: cpy:Cphy_1021 beta-phosphoglucomutase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Beta-phosphoglucomutase; SPTR: Beta-phosphoglucomutase; TIGRFAM: Beta-phosphoglucomutase; Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; manually curated; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; beta-phosphoglucomutase; haloacid dehalogenase superfamily, subfamily IA, variant 3 [...]


ensembl_gene_id: Sgly_0723
symbol: Sgly_0723
gene_biotype: protein_coding
description:
  Kojibiose phosphorylase; COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196: IPR005195: IPR005194; KEGG: gym:GYMC10_0477 glycoside hydrolase family 65 central catalytic; PFAM: Glycoside hydrolase family 65, central catalytic; Glycoside hydrolase family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; PRIAM: Kojibiose phosphorylase; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain.


ensembl_gene_id: Sgly_0724
symbol: Sgly_0724
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR001830: IPR003337: IPR006379; KEGG: gfo:GFO_1041 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)., Trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Trehalose-phosphatase; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,al [...]


ensembl_gene_id: Sgly_0726
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Sgly_0727
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Sgly_0728
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Sgly_0729
symbol: Sgly_0729
gene_biotype: protein_coding
description:
  Homocitrate synthase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891: IPR013477; KEGG: chy:CHY_1104 trans-homoaconitate synthase; PFAM: Pyruvate carboxyltransferase; PRIAM: (R)-citramalate synthase; SPTR: Homocitrate synthase; TIGRFAM: Homocitrate synthase NifV-type; PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: Sgly_0730
symbol: Sgly_0730
gene_biotype: protein_coding
description:
  Abortive infection protein; InterPro IPR003675; KEGG: dhd:Dhaf_1562 abortive infection protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family.


ensembl_gene_id: Sgly_0731
symbol: Sgly_0731
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmA family; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR002792: IPR010280: IPR001566; KEGG: dsy:DSY3765 hypothetical protein; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: Sgly_0732
symbol: Sgly_0732
gene_biotype: protein_coding
description:
  RelA/SpoT domain protein; InterPro IPR007685; KEGG: fsu:Fisuc_0324 RelA/SpoT domain protein; PFAM: RelA/SpoT; SPTR: Putative uncharacterized protein; PFAM: Region found in RelA / SpoT proteins.


ensembl_gene_id: Sgly_0735
symbol: Sgly_0735
gene_biotype: protein_coding
description:
  RHS repeat-associated core domain protein; InterPro IPR006530; KEGG: dae:Dtox_0874 YD repeat protein; SPTR: YD repeat protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).


ensembl_gene_id: Sgly_0738
symbol: Sgly_0738
gene_biotype: protein_coding
description:
  InterPro IPR002514; KEGG: cth:Cthe_2772 transposase IS3/IS911; PFAM: Transposase IS3/IS911; SPTR: Transposase IS3/IS911; manually curated; PFAM: Integrase core domain; Transposase.


ensembl_gene_id: Sgly_0740
symbol: Sgly_0740
gene_biotype: protein_coding
description:
  Histidine kinase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: dsy:DSY2026 hypothetical protein; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Sgly_0741
symbol: Sgly_0741
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: dsy:DSY2018 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.


ensembl_gene_id: Sgly_0746
symbol: Sgly_0746
gene_biotype: protein_coding
description:
  Phage repressor like transcriptional regulator, XRE family; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR001387: IPR019759: IPR006200; KEGG: dhd:Dhaf_2719 SOS-response transcriptional repressor, LexA; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SPTR: LexA repressor; TIGRFAM: Peptidase S24, LexA repressor; PFAM: Helix-turn-helix; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA.


ensembl_gene_id: Sgly_0747
symbol: Sgly_0747
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mbu:Mbur_0635 ABC transporter, inner membrane subunit; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0749
symbol: Sgly_0749
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ehi:EHI_093850 Viral A-type inclusion protein repeat; SPTR: Viral A-type inclusion protein repeat, putative.


ensembl_gene_id: Sgly_0750
symbol: Sgly_0750
gene_biotype: protein_coding
description:
  Transposase-like Mu; InterPro IPR001584: IPR015378; KEGG: amt:Amet_0388 transposase; PFAM: Transposase-like, Mu, C-terminal; Integrase, catalytic core; SPTR: Transposase; PFAM: Mu transposase, C-terminal; Bacteriophage Mu transposase.


ensembl_gene_id: Sgly_0751
symbol: Sgly_0751
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COGs: COG2842 Uncharacterized ATPase putative transposase; InterPro IPR001387; KEGG: amt:Amet_4393 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_0755
symbol: Sgly_0755
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cph:Cpha266_0408 ECF subfamily RNA polymerase sigma-24 factor; SPTR: Predicted protein.


ensembl_gene_id: Sgly_0756
symbol: Sgly_0756
gene_biotype: protein_coding
description:
  Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: bld:BLi01974 CwlC; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: CwlC; PFAM: N-acetylmuramoyl-L-alanine amidase.


ensembl_gene_id: Sgly_0759
symbol: Sgly_0759
gene_biotype: protein_coding
description:
  KEGG: amt:Amet_4389 transcriptional regulator/antitoxin, MazE; SPTR: Transcriptional regulator/antitoxin, MazE.


ensembl_gene_id: Sgly_0762
symbol: Sgly_0762
gene_biotype: protein_coding
description:
  Mor transcription activator domain protein; COGs: COG5566 conserved hypothetical protein; InterPro IPR014875; KEGG: dbr:Deba_3275 Mor transcription activator domain protein; PFAM: Mor transcription activator; SPTR: Predicted protein; PFAM: Mor transcription activator family.


ensembl_gene_id: Sgly_0767
symbol: Sgly_0767
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG5525 Bacteriophage tail assembly protein; KEGG: dal:Dalk_4561 bacteriophage tail assembly protein-like protein; SPTR: Bacteriophage tail assembly protein-like protein; PFAM: Phage terminase large subunit (GpA).


ensembl_gene_id: Sgly_0768
symbol: Sgly_0768
gene_biotype: protein_coding
description:
  KEGG: dap:Dacet_2219 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF935).


ensembl_gene_id: Sgly_0769
symbol: Sgly_0769
gene_biotype: protein_coding
description:
  InterPro IPR006528; KEGG: npu:Npun_R2610 SPP1 family phage head morphogenesis protein; PFAM: Phage putative head morphogenesis protein, SPP1 gp7; SPTR: Phage putative head morphogenesis protein, SPP1 gp7 family; TIGRFAM: Phage putative head morphogenesis protein, SPP1 gp7; PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.


ensembl_gene_id: Sgly_0770
symbol: Sgly_0770
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cjr:CJE0244 Mu-like prophage I protein, putative; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage I protein.


ensembl_gene_id: Sgly_0771
symbol: Sgly_0771
gene_biotype: protein_coding
description:
  KEGG: phu:Phum_PHUM135300 hypothetical protein; SPTR: Toxin-antitoxin system, toxin component, RelE family.


ensembl_gene_id: Sgly_0772
symbol: Sgly_0772
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ljo:LJ0314 Lj965 prophage major head protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0773
symbol: Sgly_0773
gene_biotype: protein_coding
description:
  KEGG: sfu:Sfum_1884 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1320).


ensembl_gene_id: Sgly_0774
symbol: Sgly_0774
gene_biotype: protein_coding
description:
  COGs: COG5005 Mu-like prophage protein gpG; KEGG: btr:Btr_2621 hypothetical protein; SPTR: Phage virion morphogenesis protein; PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein.


ensembl_gene_id: Sgly_0776
symbol: Sgly_0776
gene_biotype: protein_coding
description:
  COGs: COG3497 Phage tail sheath protein FI; KEGG: cfl:Cfla_2260 tail sheath protein; SPTR: Tail sheath protein; PFAM: Phage tail sheath protein.


ensembl_gene_id: Sgly_0777
symbol: Sgly_0777
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: emi:Emin_1484 electron transfer flavoprotein alpha subunit; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Sgly_0780
symbol: Sgly_0780
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cfa:478563 solute carrier family 9, member 10; SPTR: Inositolphosphorylceramide synthase.


ensembl_gene_id: Sgly_0781
symbol: Sgly_0781
gene_biotype: protein_coding
description:
  Phage tail tape measure protein, TP901 family; InterPro IPR010090; KEGG: lmy:LM5923_1317 hypothetical protein; PFAM: Phage tail tape measure protein TP901, core region; SPTR: Putative uncharacterized protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.


ensembl_gene_id: Sgly_0782
symbol: Sgly_0782
gene_biotype: protein_coding
description:
  Peptidoglycan-binding lysin domain protein; InterPro IPR002482: IPR018392; KEGG: dhd:Dhaf_1417 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; PFAM: LysM domain.


ensembl_gene_id: Sgly_0783
symbol: Sgly_0783
gene_biotype: protein_coding
description:
  KEGG: bgl:bglu_1g20340 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage late control gene D protein (GPD).


ensembl_gene_id: Sgly_0784
symbol: Sgly_0784
gene_biotype: protein_coding
description:
  KEGG: cbt:CLH_1713 putative phage baseplate assembly protein V; SPTR: Putative phage baseplate assembly protein V; PFAM: Phage-related baseplate assembly protein.


ensembl_gene_id: Sgly_0785
symbol: Sgly_0785
gene_biotype: protein_coding
description:
  GPW/gp25 family protein; InterPro IPR007048; KEGG: mpd:MCP_0320 hypothetical protein; PFAM: GPW/gp25; SPTR: Gp14.1; PFAM: Gene 25-like lysozyme.


ensembl_gene_id: Sgly_0786
symbol: Sgly_0786
gene_biotype: protein_coding
description:
  Baseplate J family protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; InterPro IPR006949; KEGG: gym:GYMC10_5392 baseplate J family protein; PFAM: Baseplate assembly protein J-like, predicted; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.


ensembl_gene_id: Sgly_0787
symbol: Sgly_0787
gene_biotype: protein_coding
description:
  KEGG: gym:GYMC10_5391 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2313).


ensembl_gene_id: Sgly_0788
symbol: Sgly_0788
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afl:Aflv_0675 phage-related putative tail protein; SPTR: Phage-related putative tail protein.


ensembl_gene_id: Sgly_0789
symbol: Sgly_0789
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sec:SC0572 phosphoribosylaminoimidazole carboxylase ATPase subunit; SPTR: Phosphoribosylaminoimidazole carboxylase AIR carboxylase, CO(2)-fixing subunit.


ensembl_gene_id: Sgly_0790
symbol: Sgly_0790
gene_biotype: protein_coding
description:
  KEGG: ppe:PEPE_0804 hypothetical protein; SPTR: Phage uncharacterised protein (Phage_XkdX); PFAM: Phage uncharacterised protein (Phage_XkdX); TIGRFAM: phage uncharacterized protein, XkdX family.


ensembl_gene_id: Sgly_0791
symbol: Sgly_0791
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: shl:Shal_0840 LuxR family transcriptional regulator; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0794
symbol: Sgly_0794
gene_biotype: protein_coding
description:
  InterPro IPR000182; KEGG: cbe:Cbei_3943 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0796
symbol: Sgly_0796
gene_biotype: protein_coding
description:
  Addiction module toxin, RelE/StbE family; COGs: COG3041 conserved hypothetical protein; InterPro IPR007712: IPR012753; KEGG: clo:HMPREF0868_1572 toxin-antitoxin system, toxin component, RelE family; PFAM: Plasmid stabilisation system; SPTR: Toxin-antitoxin system, toxin component, RelE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family.


ensembl_gene_id: Sgly_0797
symbol: Sgly_0797
gene_biotype: protein_coding
description:
  Addiction module antitoxin, RelB/DinJ family; COGs: COG3077 DNA-damage-inducible protein J; InterPro IPR007337; KEGG: cdl:CDR20291_1760 addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; SPTR: Putative uncharacterized protein; TIGRFAM: RelB antitoxin; PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.


ensembl_gene_id: Sgly_0799
symbol: Sgly_0799
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551: IPR010499; KEGG: amt:Amet_4423 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Bacterial transcription activator, effector binding; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain.


ensembl_gene_id: Sgly_0800
symbol: Sgly_0800
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: sfu:Sfum_1018 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Sgly_0801
symbol: Sgly_0801
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: ccb:Clocel_2834 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: Sgly_0802
symbol: Sgly_0802
gene_biotype: protein_coding
description:
  COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR010067; KEGG: tjr:TherJR_0600 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; SPTR: Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family.


ensembl_gene_id: Sgly_0803
symbol: Sgly_0803
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_0804
symbol: Sgly_0804
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: tjr:TherJR_0602 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0805
symbol: Sgly_0805
gene_biotype: protein_coding
description:
  Urea carboxylase-associated protein 2; COGs: COG3665 conserved hypothetical protein; InterPro IPR018959: IPR017792; KEGG: pjd:Pjdr2_2803 UreA carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; SPTR: Urea carboxylase-associated protein 2; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 2.


ensembl_gene_id: Sgly_0806
symbol: Sgly_0806
gene_biotype: protein_coding
description:
  COGs: COG3665 conserved hypothetical protein; InterPro IPR018959: IPR017791; KEGG: pjd:Pjdr2_2804 UreA carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; SPTR: Urea carboxylase-associated protein 1; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 1.


ensembl_gene_id: Sgly_0807
symbol: Sgly_0807
gene_biotype: protein_coding
description:
  Urea carboxylase; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR003778: IPR003833: IPR005481: IPR005479: IPR 005482: IPR000089: IPR014084; KEGG: pjd:Pjdr2_2805 UreA carboxylase; PFAM: Allophanate hydrolase subunit 2; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; Biotin/lipoyl attachment; PRIAM: Urea carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; SPTR: Urea carboxylase; TIGRFAM: Urea car [...]


ensembl_gene_id: Sgly_0808
symbol: Sgly_0808
gene_biotype: protein_coding
description:
  Allophanate hydrolase; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: pjd:Pjdr2_2806 allophanate hydrolase; PFAM: Amidase; PRIAM: Allophanate hydrolase; SPTR: Allophanate hydrolase; PFAM: Amidase; TIGRFAM: allophanate hydrolase.


ensembl_gene_id: Sgly_0809
symbol: Sgly_0809
gene_biotype: protein_coding
description:
  BioY protein; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: sta:STHERM_c14470 biotin synthesis protein BioY; PFAM: BioY protein; SPTR: BioY protein; PFAM: BioY family.


ensembl_gene_id: Sgly_0810
symbol: Sgly_0810
gene_biotype: protein_coding
description:
  COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dal:Dalk_0378 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit.


ensembl_gene_id: Sgly_0811
symbol: Sgly_0811
gene_biotype: protein_coding
description:
  COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: dal:Dalk_0379 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; PFAM: Cobalt transport protein.


ensembl_gene_id: Sgly_0812
symbol: birA
gene_biotype: protein_coding
description:
  biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: Sgly_0813
symbol: Sgly_0813
gene_biotype: protein_coding
description:
  ATPase associated with various cellular activities AAA_5; COGs: COG5271 AAA ATPase containing von Willebrand factor type A (vWA) domain; InterPro IPR011704; KEGG: apr:Apre_0603 ATPase associated with various cellular activities AAA_5; PFAM: ATPase, AAA-5; SPTR: Possible nitric oxide reductase; PFAM: AAA domain (dynein-related subfamily).


ensembl_gene_id: Sgly_0816
symbol: Sgly_0816
gene_biotype: protein_coding
description:
  KEGG: psa:PST_1420 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3375).


ensembl_gene_id: Sgly_0818
symbol: Sgly_0818
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein; COGs: COG4913 conserved hypothetical protein; KEGG: sat:SYN_01817 putative cytoplasmic protein; SPTR: Hypothetical cytosolic protein.


ensembl_gene_id: Sgly_0819
symbol: Sgly_0819
gene_biotype: protein_coding
description:
  COGs: COG4924 conserved hypothetical protein; KEGG: aeh:Mlg_2293 hypothetical protein; SPTR: Conserved hypothetical cytosolic protein; PFAM: Uncharacterized protein conserved in bacteria N-term (DUF3322); Uncharacterized protein conserved in bacteria C-term(DUF2220).


ensembl_gene_id: Sgly_0821
symbol: Sgly_0821
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: cbe:Cbei_3861 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_0822
symbol: Sgly_0822
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR014284; KEGG: ckr:CKR_0055 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_0825
symbol: Sgly_0825
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_2122 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Sgly_0826
symbol: Sgly_0826
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sss:SSUSC84_1333 putative lipoprotein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0829
symbol: Sgly_0829
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dhd:Dhaf_1589 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Sgly_0830
symbol: Sgly_0830
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cpr:CPR_0053 antibiotic ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Bacitracin transport ATP-binding protein BcrA; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0837
symbol: Sgly_0837
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: pjd:Pjdr2_1033 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regula [...]


ensembl_gene_id: Sgly_0838
symbol: Sgly_0838
gene_biotype: protein_coding
description:
  COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: pjd:Pjdr2_1032 histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Sgly_0839
symbol: Sgly_0839
gene_biotype: protein_coding
description:
  KEGG: afl:Aflv_0548 DNA-directed RNA polymerase specialized sigma factor, ComX; SPTR: DNA-directed RNA polymerase specialized sigma factor, ComX; PFAM: Bacillus competence pheromone ComX.


ensembl_gene_id: Sgly_0840
symbol: Sgly_0840
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: pjd:Pjdr2_1029 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Sgly_0842
symbol: Sgly_0842
gene_biotype: protein_coding
description:
  Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242: IPR000873: IPR006163: IPR013120: IPR 010071: IPR010080; KEGG: bcg:BCG9842_B4376 linear gramicidin synthetase subunit D; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Male sterility, NAD-binding; PRIAM: Phenylalanine racemase (ATP-hydrolyzing)., Steroid Delta-isomerase; SPTR: Putative uncharacterized protein; TIGRFAM: Amino acid adenylation; Thioester reductase; PFAM: Male sterility protein; Phosphopantetheine at [...]


ensembl_gene_id: Sgly_0843
symbol: Sgly_0843
gene_biotype: protein_coding
description:
  Integral membrane sensor hybrid histidine kinase; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR001789; KEGG: afw:Anae109_2929 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SPTR: PAS/PAC sens [...]


ensembl_gene_id: Sgly_0845
symbol: Sgly_0845
gene_biotype: protein_coding
description:
  N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: dol:Dole_0276 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: Type I restriction-modification; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).


ensembl_gene_id: Sgly_0846
symbol: Sgly_0846
gene_biotype: protein_coding
description:
  Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: mba:Mbar_A1015 hypothetical protein; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Putative uncharacterized protein; PFAM: Type I restriction modification DNA specificity domain.


ensembl_gene_id: Sgly_0848
symbol: Sgly_0848
gene_biotype: protein_coding
description:
  COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001: IPR007409: IPR006935; KEGG: nth:Nther_0797 protein of unknown function DUF450; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SMART: DEAD-like helicase, N-terminal; SPTR: DEAD/DEAH box helicase; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.


ensembl_gene_id: Sgly_0849
symbol: Sgly_0849
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: dhd:Dhaf_4949 hypothetical protein; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0850
symbol: Sgly_0850
gene_biotype: protein_coding
description:
  Filamentation induced by cAMP protein Fic; COGs: COG2184 Protein involved in cell division; InterPro IPR003812; KEGG: pph:Ppha_1247 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Cell filamentation protein; PFAM: Fic/DOC family.


ensembl_gene_id: Sgly_0851
symbol: Sgly_0851
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1616; COGs: COG4743 membrane protein; InterPro IPR011674; KEGG: pth:PTH_0376 hypothetical protein; PFAM: Protein of unknown function DUF1616; SPTR: Predicted membrane protein; PFAM: Protein of unknown function (DUF1616).


ensembl_gene_id: Sgly_0852
symbol: Sgly_0852
gene_biotype: protein_coding
description:
  COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR003594; KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Sgly_0853
symbol: Sgly_0853
gene_biotype: protein_coding
description:
  Accessory gene regulator B; InterPro IPR006741; KEGG: dae:Dtox_3199 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; SPTR: Accessory gene regulator B; PFAM: Accessory gene regulator B.


ensembl_gene_id: Sgly_0855
symbol: Sgly_0855
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: dau:Daud_0746 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.


ensembl_gene_id: Sgly_0856
symbol: Sgly_0856
gene_biotype: protein_coding
description:
  Geranylgeranyl reductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002218: IPR011777; KEGG: pth:PTH_0378 dehydrogenases; PFAM: Glucose-inhibited division protein A-related; SPTR: Dehydrogenases; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family.


ensembl_gene_id: Sgly_0857
symbol: Sgly_0857
gene_biotype: protein_coding
description:
  COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtp:Mthe_1077 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.


ensembl_gene_id: Sgly_0858
symbol: Sgly_0858
gene_biotype: protein_coding
description:
  COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mpd:MCP_2706 putative glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Putative glycosyltransferase; PFAM: Glycosyl transferases group 1.


ensembl_gene_id: Sgly_0859
symbol: Sgly_0859
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: dak:DaAHT2_2410 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Sgly_0860
symbol: Sgly_0860
gene_biotype: protein_coding
description:
  Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating); COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sjp:SJA_C2-02040 oxidoreductase-like protein; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating); SPTR: Oxidoreductase-like protein; PFAM: NAD dependent epimerase/dehydratase family.


ensembl_gene_id: Sgly_0861
symbol: Sgly_0861
gene_biotype: protein_coding
description:
  COGs: COG2327 conserved hypothetical protein; KEGG: swo:Swol_0123 polysaccharide pyruvyl transferase; SPTR: Pyruvyl-transferase; PFAM: Polysaccharide pyruvyl transferase.


ensembl_gene_id: Sgly_0862
symbol: Sgly_0862
gene_biotype: protein_coding
description:
  KEGG: mpd:MCP_0891 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2206).


ensembl_gene_id: Sgly_0863
symbol: Sgly_0863
gene_biotype: protein_coding
description:
  Multi antimicrobial extrusion protein MatE; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002528; KEGG: det:DET0215 polysaccharide biosynthesis protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.


ensembl_gene_id: Sgly_0864
symbol: Sgly_0864
gene_biotype: protein_coding
description:
  Protein of unknown function DUF457, transmembrane; InterPro IPR007404; KEGG: dae:Dtox_4305 membrane-bound metal-dependent hydrolase; PFAM: Protein of unknown function DUF457, transmembrane; SPTR: Membrane-bound metal-dependent hydrolase; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457).


ensembl_gene_id: Sgly_0865
symbol: Sgly_0865
gene_biotype: protein_coding
description:
  COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835: IPR001538; KEGG: hor:Hore_22860 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.


ensembl_gene_id: Sgly_0866
symbol: Sgly_0866
gene_biotype: protein_coding
description:
  COGs: COG1109 Phosphomannomutase; InterPro IPR005844: IPR005845: IPR005846: IPR005843; KEGG: pth:PTH_0398 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; SPTR: Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomanno [...]


ensembl_gene_id: Sgly_0868
symbol: Sgly_0868
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: pth:PTH_0413 ABC-type transport system, involved in lipoprotein release, permeasecomponent; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC-type transport system, involved in lipoprotein release, permeasecomponent; PFAM: Predicted permease.


ensembl_gene_id: Sgly_0869
symbol: Sgly_0869
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: pth:PTH_0414 peptide ABC transporter ATPase; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0874
symbol: Sgly_0874
gene_biotype: protein_coding
description:
  KEGG: ljo:LJ1761 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2791).


ensembl_gene_id: Sgly_0875
symbol: Sgly_0875
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; COGs: COG1201 Lhr-like helicase; InterPro IPR014001: IPR001650: IPR011545; KEGG: gym:GYMC10_0223 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Putative uncharacterized protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.


ensembl_gene_id: Sgly_0878
symbol: Sgly_0878
gene_biotype: protein_coding
description:
  S-layer domain-containing protein; InterPro IPR001119: IPR002479; KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein; PFAM: S-layer homology domain; Putative cell wall binding repeat; SPTR: Peptidoglycan-binding lysin domain protein; PFAM: S-layer homology domain.


ensembl_gene_id: Sgly_0879
symbol: Sgly_0879
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: swd:Swoo_1457 YD repeat-containing protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0880
symbol: Sgly_0880
gene_biotype: protein_coding
description:
  COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR003594; KEGG: eel:EUBELI_00658 hypothetical protein; PFAM: ATPase-like, ATP-binding domain; SPTR: Predicted protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Sgly_0881
symbol: Sgly_0881
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: ele:Elen_1697 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.


ensembl_gene_id: Sgly_0883
symbol: Sgly_0883
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: dsy:DSY3639 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_0884
symbol: Sgly_0884
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: dhd:Dhaf_1741 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_0885
symbol: Sgly_0885
gene_biotype: protein_coding
description:
  Sulfatase; COGs: COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily; InterPro IPR000917; KEGG: dhd:Dhaf_3211 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.


ensembl_gene_id: Sgly_0886
symbol: Sgly_0886
gene_biotype: protein_coding
description:
  YcfA family protein; InterPro IPR012933; KEGG: npu:Npun_R4600 YcfA family protein; PFAM: YcfA-like; SPTR: YcfA family protein; PFAM: YcfA-like protein.


ensembl_gene_id: Sgly_0887
symbol: Sgly_0887
gene_biotype: protein_coding
description:
  COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dhd:Dhaf_1742 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0888
symbol: Sgly_0888
gene_biotype: protein_coding
description:
  ABC-2 type transporter; InterPro IPR013525; KEGG: dhd:Dhaf_1743 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; PFAM: ABC-2 type transporter.


ensembl_gene_id: Sgly_0889
symbol: Sgly_0889
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase (quinone); COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: ele:Elen_0321 NAD(P)H dehydrogenase (quinone); PFAM: Flavodoxin-like fold; SPTR: NAD(P)H dehydrogenase, quinone family; PFAM: Flavodoxin-like fold.


ensembl_gene_id: Sgly_0891
symbol: Sgly_0891
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: gym:GYMC10_0333 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_0893
symbol: Sgly_0893
gene_biotype: protein_coding
description:
  Protein of unknown function DUF541; COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: dae:Dtox_1759 protein of unknown function DUF541; PFAM: Protein of unknown function DUF541; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541).


ensembl_gene_id: Sgly_0894
symbol: Sgly_0894
gene_biotype: protein_coding
description:
  Drug resistance transporter, Bcr/CflA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR004812; KEGG: ckr:CKR_3008 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein.


ensembl_gene_id: Sgly_0896
symbol: Sgly_0896
gene_biotype: protein_coding
description:
  DNA-7-methylguanine glycosylase; COGs: COG4912 DNA alkylation repair protein; InterPro IPR014825; KEGG: sgo:SGO_1207 DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; SPTR: DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme.


ensembl_gene_id: Sgly_0898
symbol: Sgly_0898
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG3153 acetyltransferase; InterPro IPR000182; KEGG: mba:Mbar_A3726 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0900
symbol: Sgly_0900
gene_biotype: protein_coding
description:
  COGs: COG2378 transcriptional regulator protein; KEGG: clj:CLJU_c35580 putative transcriptional regulator; SPTR: Predicted transcriptional regulator; PFAM: HTH domain.


ensembl_gene_id: Sgly_0901
symbol: Sgly_0901
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1203 helicase; InterPro IPR001650: IPR006674: IPR006483: IPR006474; KEGG: rrs:RoseRS_4335 CRISPR-associated helicase Cas3; PFAM: Metal-dependent phosphohydrolase, HD subdomain; DNA/RNA helicase, C-terminal; SMART: DNA/RNA helicase, C-terminal; SPTR: CRISPR-associated helicase, Cas3 family; TIGRFAM: CRISPR-associated HD domain; Helicase Cas3, CRISPR-associated, core; PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.


ensembl_gene_id: Sgly_0902
symbol: Sgly_0902
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csd5d family; InterPro IPR021124: IPR013422: IPR010155; KEGG: geo:Geob_3415 CRISPR-associated protein Cas5 family; PFAM: CRISPR-associated protein, Cas5; SPTR: CRISPR-associated protein, CT1134; TIGRFAM: CRISPR-associated protein, Cas5d-type; CRISPR-associated protein Cas5, N-terminal domain; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, Dvulg subtype; CRISPR-associated protein Cas5, N-terminal domain.


ensembl_gene_id: Sgly_0903
symbol: Sgly_0903
gene_biotype: protein_coding
description:
  InterPro IPR010144; KEGG: rrs:RoseRS_4333 CRISPR-associated RAMP Csd1 family protein; PFAM: CRISPR-associated protein, Csd1-type; SPTR: CRISPR-associated protein, Csd1 family; TIGRFAM: CRISPR-associated protein, Csd1-type; PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein, Csd1 family.


ensembl_gene_id: Sgly_0904
symbol: Sgly_0904
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csd2 family; COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR006482: IPR013418; KEGG: rrs:RoseRS_4332 CRISPR-associated Csd2 family protein; PFAM: CRISPR-associated protein TM1801; SPTR: CRISPR-associated protein, Csd2 family; TIGRFAM: CRISPR-associated protein Csd2; CRISPR-associated protein TM1801; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family.


ensembl_gene_id: Sgly_0905
symbol: Sgly_0905
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: Sgly_0906
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Sgly_0907
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Sgly_0909
symbol: Sgly_0909
gene_biotype: protein_coding
description:
  COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277: IPR006235; KEGG: bvu:BVU_0770 O-acetylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: Putative uncharacterized protein; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase.


ensembl_gene_id: Sgly_0910
symbol: Sgly_0910
gene_biotype: protein_coding
description:
  Regulatory protein MarR; InterPro IPR000835; KEGG: dae:Dtox_2550 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Sgly_0912
symbol: Sgly_0912
gene_biotype: protein_coding
description:
  Protein of unknown function DUF81; InterPro IPR002781; KEGG: dsy:DSY3674 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE.


ensembl_gene_id: Sgly_0913
symbol: Sgly_0913
gene_biotype: protein_coding
description:
  Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: cpo:COPRO5265_1461 penicillinase repressor (regulatory protein BlaI) (beta-lactamaserepressor protein); PFAM: Penicillinase repressor; SPTR: Penicillinase repressor (Regulatory protein BlaI) (Beta-lactamaserepressor protein); PFAM: Penicillinase repressor.


ensembl_gene_id: Sgly_0914
symbol: Sgly_0914
gene_biotype: protein_coding
description:
  Peptidase M56 BlaR1; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: cpo:COPRO5265_1460 peptidase, M56 family protein; PFAM: Peptidase M56, BlaR1; SPTR: Peptidase, M56 family protein; PFAM: BlaR1 peptidase M56.


ensembl_gene_id: Sgly_0915
symbol: Sgly_0915
gene_biotype: protein_coding
description:
  COGs: COG2866 carboxypeptidase; InterPro IPR002482: IPR000834: IPR002477: IPR018392; KEGG: cbl:CLK_0816 zinc carboxypeptidase family protein; PFAM: Peptidase M14, carboxypeptidase A; Peptidoglycan binding-like; Peptidoglycan-binding lysin domain; SMART: Peptidase M14, carboxypeptidase A; Peptidoglycan-binding Lysin subgroup; SPTR: Zinc carboxypeptidase family protein; PFAM: Putative peptidoglycan binding domain; Zinc carboxypeptidase; LysM domain.


ensembl_gene_id: Sgly_0916
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: Sgly_0917
symbol: Sgly_0917
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: cac:CA_C0723 AcrR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, AcrR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_0918
symbol: Sgly_0918
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: cdl:CDR20291_0414 putative iron-sulfur flavoprotein; PFAM: NADPH-dependent FMN reductase; SPTR: Putative iron-sulfur flavoprotein; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: Sgly_0919
symbol: Sgly_0919
gene_biotype: protein_coding
description:
  RNA-directed DNA polymerase (Reverse transcriptase); COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477; KEGG: nth:Nther_2778 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (reverse transcriptase); SPTR: RNA-directed DNA polymerase (Reverse transcriptase); PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).


ensembl_gene_id: Sgly_0920
symbol: Sgly_0920
gene_biotype: protein_coding
description:
  InterPro IPR006674; KEGG: ccb:Clocel_0535 metal-dependent phosphohydrolase HD sub domain; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SPTR: Metal-dependent phosphohydrolase HD sub domain; PFAM: HD domain.


ensembl_gene_id: Sgly_0922
symbol: Sgly_0922
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: ckr:CKR_0293 hypothetical protein; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; PFAM: Nitroreductase family.


ensembl_gene_id: Sgly_0923
symbol: Sgly_0923
gene_biotype: protein_coding
description:
  COGs: COG2094 3-methyladenine DNA glycosylase; HAMAP: Methylpurine-DNA glycosylase (MPG); InterPro IPR003180; KEGG: dhd:Dhaf_1650 3-methyladenine DNA glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG); PRIAM: DNA-3-methyladenine glycosylase II; SPTR: Putative 3-methyladenine DNA glycosylase; TIGRFAM: Methylpurine-DNA glycosylase (MPG); PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg); Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: Sgly_0924
symbol: Sgly_0924
gene_biotype: protein_coding
description:
  COGs: COG3572 Gamma-glutamylcysteine synthetase; KEGG: mst:Msp_0837 glutamylcysteine synthetase; SPTR: Predicted glutamylcysteine synthetase; PFAM: Glutamate-cysteine ligase family 2(GCS2).


ensembl_gene_id: Sgly_0925
symbol: Sgly_0925
gene_biotype: protein_coding
description:
  Amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933: IPR011650: IPR010168; KEGG: ccb:Clocel_3472 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase.


ensembl_gene_id: Sgly_0926
symbol: Sgly_0926
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR000086; KEGG: rpd:RPD_2109 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase.


ensembl_gene_id: Sgly_0928
symbol: Sgly_0928
gene_biotype: protein_coding
description:
  COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: blo:BL1559 cystathionine gamma lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-synthase; SPTR: Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.


ensembl_gene_id: Sgly_0929
symbol: Sgly_0929
gene_biotype: protein_coding
description:
  methylated-DNA/protein- cysteinemethyltransferase; COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: dhd:Dhaf_4686 methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Putative uncharacterized protein; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase.


ensembl_gene_id: Sgly_0932
symbol: Sgly_0932
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387: IPR013216; KEGG: dhd:Dhaf_0966 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; Methyltransferase type 11; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; Tellurite resistance protein TehB.


ensembl_gene_id: Sgly_0934
symbol: Sgly_0934
gene_biotype: protein_coding
description:
  COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: mla:Mlab_1055 hypothetical protein; PFAM: Transglutaminase-like; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily.


ensembl_gene_id: Sgly_0935
symbol: Sgly_0935
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: afl:Aflv_1326 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: Sgly_0936
symbol: Sgly_0936
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: bha:BH2335 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_0937
symbol: Sgly_0937
gene_biotype: protein_coding
description:
  Protein of unknown function DUF990; COGs: COG4587 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: pjd:Pjdr2_0631 protein of unknown function DUF990; PFAM: Protein of unknown function DUF990; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF990).


ensembl_gene_id: Sgly_0938
symbol: Sgly_0938
gene_biotype: protein_coding
description:
  Protein of unknown function DUF990; COGs: COG3694 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: sth:STH3203 hypothetical protein; PFAM: Protein of unknown function DUF990; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF990).


ensembl_gene_id: Sgly_0939
symbol: Sgly_0939
gene_biotype: protein_coding
description:
  COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: sth:STH2664 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0941
symbol: Sgly_0941
gene_biotype: protein_coding
description:
  InterPro IPR000182; KEGG: dbr:Deba_1308 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0942
symbol: Sgly_0942
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1006; COGs: COG3214 conserved hypothetical protein; InterPro IPR009351; KEGG: bbe:BBR47_29660 hypothetical protein; PFAM: Protein of unknown function DUF1006; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1006).


ensembl_gene_id: Sgly_0943
symbol: Sgly_0943
gene_biotype: protein_coding
description:
  InterPro IPR000182; KEGG: spe:Spro_3703 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0944
symbol: Sgly_0944
gene_biotype: protein_coding
description:
  NUDIX hydrolase; InterPro IPR000086; KEGG: aoe:Clos_1150 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.


ensembl_gene_id: Sgly_0945
symbol: Sgly_0945
gene_biotype: protein_coding
description:
  KEGG: srt:Srot_2687 UDP-N-acetylglucosamine pyrophosphorylase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_0946
symbol: Sgly_0946
gene_biotype: protein_coding
description:
  InterPro IPR004360; KEGG: ssm:Spirs_4161 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.


ensembl_gene_id: Sgly_0947
symbol: Sgly_0947
gene_biotype: protein_coding
description:
  InterPro IPR000182; KEGG: cbe:Cbei_2368 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0948
symbol: Sgly_0948
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0157; COGs: COG2320 conserved hypothetical protein; InterPro IPR007344; KEGG: cdl:CDR20291_0528 hypothetical protein; PFAM: Uncharacterised protein family UPF0157; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0157).


ensembl_gene_id: Sgly_0950
symbol: Sgly_0950
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG2153 acyltransferase; InterPro IPR000182; KEGG: rsk:RSKD131_2523 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_0951
symbol: Sgly_0951
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: pth:PTH_2671 ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase domain; SPTR: ADP-ribose pyrophosphatase; PFAM: NUDIX domain.


ensembl_gene_id: Sgly_0952
symbol: Sgly_0952
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: eca:ECA1768 putative acetyltransferase; SPTR: GCN5-related N-acetyltransferase.


ensembl_gene_id: Sgly_0953
symbol: Sgly_0953
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COGs: COG1896 hydrolase of HD superfamily; KEGG: ttm:Tthe_2227 metal dependent phosphohydrolase; SPTR: Metal dependent phosphohydrolase.


ensembl_gene_id: Sgly_0955
symbol: Sgly_0955
gene_biotype: protein_coding
description:
  Peptidase U61 LD-carboxypeptidase A; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: gwc:GWCH70_1976 peptidase U61 LD-carboxypeptidase A; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR: Peptidase U61 LD-carboxypeptidase A; PFAM: LD-carboxypeptidase.


ensembl_gene_id: Sgly_0956
symbol: Sgly_0956
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402: IPR006439: IPR005834; KEGG: gym:GYMC10_3737 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucom [...]


ensembl_gene_id: Sgly_0957
symbol: Sgly_0957
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR004839; KEGG: glo:Glov_2977 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; PRIAM: Cystathionine beta-lyase; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Sgly_0958
symbol: Sgly_0958
gene_biotype: protein_coding
description:
  Pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family; COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; InterPro IPR005966: IPR001926; KEGG: ckr:CKR_0446 D-cysteine desulfhydrase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: 1-aminocyclopropane-1-carboxylate deaminase; SPTR: Putative uncharacterized protein; TIGRFAM: Pyridoxal phosphate-dependent deaminase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family.


ensembl_gene_id: Sgly_0959
symbol: Sgly_0959
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: bcz:BCZK0557 RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Sigma-70, region 4 subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Sgly_0962
symbol: Sgly_0962
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase LigD polymerase moduleATP-dependent DNA ligase LigD phosphoesterase module; COGs: COG3285 eukaryotic-type DNA primase; InterPro IPR014144: IPR014146: IPR014143: IPR014145: IPR 012310: IPR012309: IPR002755; KEGG: dhd:Dhaf_0568 DNA ligase D; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; DNA primase, small subunit; SPTR: DNA ligase D; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, polymerase domain; PFAM: ATP dependent DNA ligase domain; Eukaryotic and archae [...]


ensembl_gene_id: Sgly_0963
symbol: Sgly_0963
gene_biotype: protein_coding
description:
  COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR000257; KEGG: fpl:Ferp_1758 uroporphyrinogen decarboxylase (URO-D); PFAM: Uroporphyrinogen decarboxylase (URO-D); SPTR: Uroporphyrinogen decarboxylase (URO-D); PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: Sgly_0964
symbol: Sgly_0964
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: cbe:Cbei_0706 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Sgly_0965
symbol: Sgly_0965
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: ckr:CKR_1385 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: Sgly_0966
symbol: Sgly_0966
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: ckr:CKR_1626 hypothetical protein; PFAM: Nitrogen regulatory protein PII; SPTR: Putative uncharacterized protein; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Sgly_0967
symbol: Sgly_0967
gene_biotype: protein_coding
description:
  COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: cpb:Cphamn1_1753 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein PII; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Sgly_0968
symbol: Sgly_0968
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_0969
symbol: Sgly_0969
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: tjr:TherJR_0602 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Taurine ABC transporter, ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0970
symbol: Sgly_0970
gene_biotype: protein_coding
description:
  Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR010067: IPR001638; KEGG: tjr:TherJR_0600 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; SMART: Extracellular solute-binding protein, family 3; SPTR: Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-bindin [...]


ensembl_gene_id: Sgly_0971
symbol: Sgly_0971
gene_biotype: protein_coding
description:
  Agmatinase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR005925: IPR006035; KEGG: cwo:Cwoe_0990 arginase/agmatinase/formiminoglutamase; PFAM: Ureohydrolase; PRIAM: Agmatinase; SPTR: Putative agmatine ureohydrolase; TIGRFAM: Putative agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family.


ensembl_gene_id: Sgly_0972
symbol: Sgly_0972
gene_biotype: protein_coding
description:
  InterPro IPR002187; KEGG: tsi:TSIB_1114 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.


ensembl_gene_id: Sgly_0973
symbol: Sgly_0973
gene_biotype: protein_coding
description:
  Transcriptional regulator, CdaR; COGs: COG3835 Sugar diacid utilization regulator; KEGG: cac:CA_C1426 transcriptional regulator; SPTR: Possible transcriptional regulator from leucine-rich protein (LRPR) family; PFAM: Purine catabolism regulatory protein-like family.


ensembl_gene_id: Sgly_0974
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit gamma; COGs: COG0831 Urea amidohydrolase (urease) gamma subunit; HAMAP: Urease, gamma subunit; InterPro IPR002026: IPR012010; KEGG: cth:Cthe_1818 urease, gamma subunit; PFAM: Urease, alpha/gamma subunit; PRIAM: Urease; SPTR: Urease subunit gamma; TIGRFAM: Urease, alpha/gamma subunit; PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit.


ensembl_gene_id: Sgly_0975
symbol: ureB
gene_biotype: protein_coding
description:
  Urease subunit beta; COGs: COG0832 Urea amidohydrolase (urease) beta subunit; HAMAP: Urease, beta subunit; InterPro IPR002019; KEGG: tjr:TherJR_0606 urease, beta subunit; PFAM: Urease, beta subunit; PRIAM: Urease; SPTR: Urease subunit beta; TIGRFAM: Urease, beta subunit; PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit.


ensembl_gene_id: Sgly_0976
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; HAMAP: Urease, alpha subunit; InterPro IPR005848: IPR011612: IPR006680; KEGG: cth:Cthe_1816 urease subunit alpha; PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; PRIAM: Urease; SPTR: Urease subunit alpha; TIGRFAM: Urease, alpha subunit; PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit.


ensembl_gene_id: Sgly_0977
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein ureE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: Sgly_0978
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: Sgly_0979
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: Sgly_0980
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein ureD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: Sgly_0981
symbol: Sgly_0981
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: dhd:Dhaf_2177 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative uncharacterized protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_0982
symbol: Sgly_0982
gene_biotype: protein_coding
description:
  Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001254; KEGG: ttm:Tthe_0681 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; SPTR: Putative uncharacterized protein; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF).


ensembl_gene_id: Sgly_0983
symbol: Sgly_0983
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ccb:Clocel_3453 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.


ensembl_gene_id: Sgly_0984
symbol: Sgly_0984
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ccb:Clocel_3452 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_0985
symbol: Sgly_0985
gene_biotype: protein_coding
description:
  COGs: COG0845 Membrane-fusion protein; KEGG: gct:GC56T3_2852 biotin/lipoyl attachment domain-containing protein; SPTR: Biotin/lipoyl attachment domain-containing protein.


ensembl_gene_id: Sgly_0986
symbol: Sgly_0986
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: ccb:Clocel_3449 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_0987
symbol: Sgly_0987
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: ccb:Clocel_3448 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcripti [...]


ensembl_gene_id: Sgly_0988
symbol: Sgly_0988
gene_biotype: protein_coding
description:
  Cupin 2 conserved barrel domain protein; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: cbi:CLJ_B3178 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain.


ensembl_gene_id: Sgly_0989
symbol: Sgly_0989
gene_biotype: protein_coding
description:
  ArsC family protein; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006504: IPR006660; KEGG: cth:Cthe_1508 hypothetical protein; PFAM: Arsenate reductase-like; SPTR: Transcriptional regulator, Spx/MgsR family; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family.


ensembl_gene_id: Sgly_0990
symbol: Sgly_0990
gene_biotype: protein_coding
description:
  InterPro IPR009875; KEGG: cth:Cthe_0108 type IV pilus assembly PilZ; PFAM: Type IV pilus assembly PilZ; SPTR: Type IV pilus assembly PilZ; PFAM: PilZ domain.


ensembl_gene_id: Sgly_0992
symbol: Sgly_0992
gene_biotype: protein_coding
description:
  InterPro IPR007197; KEGG: cdf:CD0392 radical SAM-superfamily protein; PFAM: Radical SAM; SPTR: Radical SAM-superfamily protein; PFAM: Radical SAM superfamily.


ensembl_gene_id: Sgly_0993
symbol: Sgly_0993
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: ckr:CKR_0741 hypothetical protein; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative uncharacterized protein; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_0994
symbol: Sgly_0994
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: ckr:CKR_0742 hypothetical protein; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative uncharacterized protein; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_0995
symbol: Sgly_0995
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: fsu:Fisuc_1078 oxidoreductase/nitrogenase component 1; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Oxidoreductase/nitrogenase component 1; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_0996
symbol: Sgly_0996
gene_biotype: protein_coding
description:
  Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: fsu:Fisuc_1077 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.


ensembl_gene_id: Sgly_0997
symbol: Sgly_0997
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: cbe:Cbei_2812 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Sgly_1005
symbol: Sgly_1005
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ptr:472444 sterile alpha motif domain containing 9-like; SPTR: Predicted protein.


ensembl_gene_id: Sgly_1008
symbol: Sgly_1008
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2196; COGs: COG4895 conserved hypothetical protein; InterPro IPR019240; KEGG: bpf:BpOF4_07485 hypothetical protein; PFAM: Protein of unknown function DUF2196; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF2196; PFAM: Uncharacterized conserved protein (DUF2196); TIGRFAM: conserved hypothetical protein.


ensembl_gene_id: Sgly_1010
symbol: Sgly_1010
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Sgly_1011
symbol: Sgly_1011
gene_biotype: protein_coding
description:
  Formylmethionine deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.


ensembl_gene_id: Sgly_1012
symbol: Sgly_1012
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: cac:CA_C2756 MDR-type ABC transporter (membrane associated ATPase); PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: MDR-type ABC transporter (Membrane associated ATPase); PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_1013
symbol: Sgly_1013
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: cac:CA_C2755 MDR-type ABC transporter (membrane associated ATPase); PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: MDR-type ABC transporter (Membrane associated ATPase); PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: Sgly_1014
symbol: Sgly_1014
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: ttm:Tthe_1938 transcriptional regulator, LacI family; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family.


ensembl_gene_id: Sgly_1015
symbol: Sgly_1015
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: mja:MJ_0412 nitrate transporter protein NrtC homolog CmpC; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Uncharacterized ABC transporter ATP-binding protein MJ0412; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1016
symbol: Sgly_1016
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: tjr:TherJR_2469 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_1017
symbol: Sgly_1017
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275: IPR002731; KEGG: mpl:Mpal_1148 CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; PRIAM: Benzoyl-CoA reductase; SPTR: CoA-substrate-specific enzyme activase; TIGRFAM: CoA enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; benzoyl-CoA reductase, bzd-type, Q subunit; benzoyl-CoA reductase, bcr type, subunit D.


ensembl_gene_id: Sgly_1018
symbol: Sgly_1018
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: gur:Gura_3877 2-hydroxyglutaryl-CoA dehydratase, D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; SPTR: 2-hydroxyglutaryl-CoA dehydratase, D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Sgly_1019
symbol: Sgly_1019
gene_biotype: protein_coding
description:
  COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: mpl:Mpal_1137 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; SPTR: 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: Sgly_1020
symbol: Sgly_1020
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 3; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR001638; KEGG: gym:GYMC10_5033 NMT1/THI5 like domain protein; SMART: Extracellular solute-binding protein, family 3; SPTR: NMT1/THI5 like domain protein; PFAM: NMT1/THI5 like.


ensembl_gene_id: Sgly_1021
symbol: Sgly_1021
gene_biotype: protein_coding
description:
  InterPro IPR011701; KEGG: dae:Dtox_1613 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; PFAM: Bacterial protein of unknown function (DUF894).


ensembl_gene_id: Sgly_1022
symbol: Sgly_1022
gene_biotype: protein_coding
description:
  Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR011697; KEGG: bln:Blon_1611 peptidase C26; PFAM: Peptidase C26; SPTR: Glutamine amidotransferase class-I domain protein; PFAM: Peptidase C26.


ensembl_gene_id: Sgly_1023
symbol: Sgly_1023
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: tjr:TherJR_0169 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1024
symbol: Sgly_1024
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: pdi:BDI_1477 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.


ensembl_gene_id: Sgly_1029
symbol: Sgly_1029
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bpb:bpr_I0755 HD-GYP/cache domain-containing protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1031
symbol: Sgly_1031
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: scb:SCAB_10741 putative nitrate/nitrite transporter protein; SPTR: Predicted protein.


ensembl_gene_id: Sgly_1032
symbol: Sgly_1032
gene_biotype: protein_coding
description:
  S-layer domain-containing protein; COGs: COG5263 FOG: Glucan-binding domain (YG repeat); InterPro IPR003961: IPR003343: IPR001119: IPR002479; KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein; PFAM: S-layer homology domain; Bacterial Ig-like, group 2; Fibronectin, type III; Putative cell wall binding repeat; SPTR: S-layer domain protein; PFAM: Bacterial Ig-like domain (group 2); Putative cell wall binding repeat; S-layer homology domain.


ensembl_gene_id: Sgly_1035
symbol: Sgly_1035
gene_biotype: protein_coding
description:
  KEGG: dsy:DSY2017 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1430).


ensembl_gene_id: Sgly_1036
symbol: Sgly_1036
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dsy:DSY2016 hypothetical protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group.


ensembl_gene_id: Sgly_1037
symbol: Sgly_1037
gene_biotype: protein_coding
description:
  COGs: COG4652 conserved hypothetical protein; KEGG: dsy:DSY2017 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1430).


ensembl_gene_id: Sgly_1039
symbol: Sgly_1039
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hpb:HELPY_0757 NAD-dependent DNA ligase LigA; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1047
symbol: Sgly_1047
gene_biotype: protein_coding
description:
  InterPro IPR014284; KEGG: dhd:Dhaf_3811 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1049
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: Sgly_1052
symbol: Sgly_1052
gene_biotype: protein_coding
description:
  VanZ family protein; InterPro IPR006976; KEGG: xce:Xcel_1422 VanZ family protein; PFAM: VanZ-like; SPTR: VanZ family protein; PFAM: VanZ like family.


ensembl_gene_id: Sgly_1054
symbol: Sgly_1054
gene_biotype: protein_coding
description:
  InterPro IPR001789; KEGG: dhd:Dhaf_4095 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Sgly_1055
symbol: Sgly_1055
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: dae:Dtox_1519 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_1056
symbol: Sgly_1056
gene_biotype: protein_coding
description:
  KEGG: bfr:BF2867 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1273).


ensembl_gene_id: Sgly_1057
symbol: Sgly_1057
gene_biotype: protein_coding
description:
  COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054: IPR006055: IPR013520: IPR001357; KEGG: sna:Snas_2943 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; BRCT; SMART: Exonuclease; SPTR: Exonuclease RNase T and DNA polymerase III; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family.


ensembl_gene_id: Sgly_1058
symbol: Sgly_1058
gene_biotype: protein_coding
description:
  Putative DNA helicase; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: pjd:Pjdr2_4661 putative DNA helicase; SPTR: Putative DNA helicase; PFAM: Protein of unknown function (DUF3320).


ensembl_gene_id: Sgly_1059
symbol: Sgly_1059
gene_biotype: protein_coding
description:
  KEGG: hch:HCH_06546 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Archaeal ATPase.


ensembl_gene_id: Sgly_1060
symbol: Sgly_1060
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sul:SYO3AOP1_1556 transposase IS116/IS110/IS902 family protein; SPTR: Transposase IS116/IS110/IS902 family protein.


ensembl_gene_id: Sgly_1064
symbol: Sgly_1064
gene_biotype: protein_coding
description:
  Domain of unknown function DUF2357-containing protein; COGs: COG1700 conserved hypothetical protein; InterPro IPR018633: IPR007505; KEGG: dsy:DSY0684 hypothetical protein; PFAM: Domain of unknown function DUF2357; Protein of unknown function DUF524; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524).


ensembl_gene_id: Sgly_1065
symbol: Sgly_1065
gene_biotype: protein_coding
description:
  ATPase associated with various cellular activities AAA_5; COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR011704; KEGG: tmt:Tmath_1395 ATPase associated with various cellular activities AAA_5; PFAM: ATPase, AAA-5; SPTR: ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); Domain of unknown function (DUF3578).


ensembl_gene_id: Sgly_1066
symbol: Sgly_1066
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tjr:TherJR_1078 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Sgly_1067
symbol: Sgly_1067
gene_biotype: protein_coding
description:
  Putative DNA helicase; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: amt:Amet_0224 putative DNA helicase; SPTR: Putative DNA helicase.


ensembl_gene_id: Sgly_1069
symbol: Sgly_1069
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG5635 NTPase (NACHT family); KEGG: ana:alr9018 hypothetical protein; SPTR: Alr9018 protein.


ensembl_gene_id: Sgly_1070
symbol: Sgly_1070
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_3323 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2922).


ensembl_gene_id: Sgly_1071
symbol: Sgly_1071
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aae:aq_468 cation efflux system (CzcB-like); SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1072
symbol: Sgly_1072
gene_biotype: protein_coding
description:
  InterPro IPR002716; KEGG: slp:Slip_0190 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: Toxin-antitoxin system, toxin component, PIN family; PFAM: PIN domain.


ensembl_gene_id: Sgly_1074
symbol: Sgly_1074
gene_biotype: protein_coding
description:
  InterPro IPR012454; KEGG: dhd:Dhaf_3322 protein of unknown function DUF1659; PFAM: Protein of unknown function DUF1659; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1659).


ensembl_gene_id: Sgly_1075
symbol: Sgly_1075
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_3324 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3102).


ensembl_gene_id: Sgly_1080
symbol: Sgly_1080
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: dae:Dtox_1359 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, SigM family.


ensembl_gene_id: Sgly_1082
symbol: Sgly_1082
gene_biotype: protein_coding
description:
  COGs: COG0515 Serine/threonine protein kinase; InterPro IPR020635: IPR002290: IPR017442; KEGG: ccb:Clocel_2526 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain.


ensembl_gene_id: Sgly_1083
symbol: Sgly_1083
gene_biotype: protein_coding
description:
  DNA polymerase beta domain protein region; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: dhd:Dhaf_1803 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain.


ensembl_gene_id: Sgly_1086
symbol: Sgly_1086
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: bmd:BMD_3900 two-component response regulator CssR; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator CssR; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_1087
symbol: Sgly_1087
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Sgly_1088
symbol: Sgly_1088
gene_biotype: protein_coding
description:
  Fagellar hook-basal body protein; COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR020013: IPR001444: IPR011491: IPR010930; KEGG: cth:Cthe_0474 protein of unknown function DUF1078-like protein; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar basal [...]


ensembl_gene_id: Sgly_1089
symbol: flgK-2
gene_biotype: protein_coding
description:
  COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371: IPR001444: IPR010930; KEGG: cth:Cthe_2244 flagellar hook-associated protein FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK.


ensembl_gene_id: Sgly_1090
symbol: flgK-3
gene_biotype: protein_coding
description:
  COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371: IPR001444: IPR010930; KEGG: cth:Cthe_2243 flagellar hook-associated protein FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK.


ensembl_gene_id: Sgly_1091
symbol: Sgly_1091
gene_biotype: protein_coding
description:
  COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR013384: IPR001492; KEGG: cth:Cthe_2242 flagellar hook-associated protein FlgL; PFAM: Flagellin, N-terminal; SPTR: Flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3.


ensembl_gene_id: Sgly_1093
symbol: Sgly_1093
gene_biotype: protein_coding
description:
  KEGG: mcc:705843 cholesterol 24-hydroxylase-like; SPTR: cDNA FLJ33567 fis, clone BRAMY2010272, highly similar to Homo sapiens cholesterol 24-hydroxylase mRNA.


ensembl_gene_id: Sgly_1094
symbol: csrA-2
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: Sgly_1096
symbol: Sgly_1096
gene_biotype: protein_coding
description:
  Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: cce:Ccel_0106 flagellar protein FliS; PFAM: Flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS.


ensembl_gene_id: Sgly_1097
symbol: Sgly_1097
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: ckr:CKR_1218 hypothetical protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Putative multi-sensor signal transduction histidine kinase; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_1098
symbol: Sgly_1098
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: cby:CLM_0936 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_1099
symbol: Sgly_1099
gene_biotype: protein_coding
description:
  Addiction module antitoxin, RelB/DinJ family; InterPro IPR007337; KEGG: san:gbs0471 hypothetical protein; PFAM: RelB antitoxin; SPTR: Addiction module antitoxin, RelB/DinJ family; TIGRFAM: RelB antitoxin; PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.


ensembl_gene_id: Sgly_1101
symbol: Sgly_1101
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dba:Dbac_3131 peptidase A24A domain protein; SPTR: Peptidase A24A domain protein; PFAM: Protein of unknown function (DUF2442).


ensembl_gene_id: Sgly_1102
symbol: Sgly_1102
gene_biotype: protein_coding
description:
  COGs: COG2247 Putative cell wall-binding domain; InterPro IPR007253; KEGG: dsy:DSY1962 hypothetical protein; PFAM: Putative cell wall binding repeat 2; SPTR: Putative uncharacterized protein; PFAM: Putative cell wall binding repeat 2.


ensembl_gene_id: Sgly_1103
symbol: Sgly_1103
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2191; InterPro IPR019239; KEGG: tde:TDE0878 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2191).


ensembl_gene_id: Sgly_1104
symbol: Sgly_1104
gene_biotype: protein_coding
description:
  InterPro IPR002716; KEGG: gur:Gura_0946 PilT domain-containing protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein; PFAM: PIN domain.


ensembl_gene_id: Sgly_1105
symbol: Sgly_1105
gene_biotype: protein_coding
description:
  Amino acid ABC transporter membrane protein 2, PAAT family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065: IPR000515; KEGG: bmd:BMD_1575 putative amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative amino acid ABC transporter, permease protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein,  [...]


ensembl_gene_id: Sgly_1106
symbol: Sgly_1106
gene_biotype: protein_coding
description:
  Amino acid ABC transporter membrane protein 1, PAAT family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065: IPR000515; KEGG: bmq:BMQ_1594 putative amino acid ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative amino acid ABC transporter, permease protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease  [...]


ensembl_gene_id: Sgly_1107
symbol: Sgly_1107
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: bmq:BMQ_1595 putative amino acid ABC transporter, amino acid-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Putative amino acid ABC transporter, amino acid-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3.


ensembl_gene_id: Sgly_1109
symbol: Sgly_1109
gene_biotype: protein_coding
description:
  COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: dat:HRM2_29060 SoxB2; PFAM: FAD dependent oxidoreductase; PRIAM: Glycine oxidase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: Sgly_1110
symbol: Sgly_1110
gene_biotype: protein_coding
description:
  InterPro IPR007419; KEGG: ckr:CKR_1804 hypothetical protein; PFAM: BFD-like [2Fe-2S]-binding domain; SPTR: BFD domain protein (2Fe-2S)-binding domain protein; PFAM: BFD-like [2Fe-2S] binding domain.


ensembl_gene_id: Sgly_1111
symbol: Sgly_1111
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: ckr:CKR_1805 hypothetical protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: HI0933 family protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Sgly_1113
symbol: Sgly_1113
gene_biotype: protein_coding
description:
  COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: sth:STH3166 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase.


ensembl_gene_id: Sgly_1114
symbol: Sgly_1114
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein, PAAT family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: lsp:Bsph_4684 amino-acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable amino-acid ABC transporter ATP-binding protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1115
symbol: Sgly_1115
gene_biotype: protein_coding
description:
  Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550: IPR000644: IPR005170; KEGG: cbe:Cbei_2190 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain.


ensembl_gene_id: Sgly_1116
symbol: Sgly_1116
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG1533 DNA repair photolyase; KEGG: swo:Swol_1838 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: spore photoproduct lyase.


ensembl_gene_id: Sgly_1119
symbol: Sgly_1119
gene_biotype: protein_coding
description:
  Putative serine protein kinase, PrkA; COGs: COG2766 Putative Ser protein kinase; InterPro IPR013153: IPR010650; KEGG: clj:CLJU_c04350 putative serine kinase; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA; SPTR: Putative kinase PrkA; PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.


ensembl_gene_id: Sgly_1120
symbol: Sgly_1120
gene_biotype: protein_coding
description:
  UPF0229 protein yeaH; COGs: COG2718 conserved hypothetical protein; HAMAP: UPF0229 protein yeaH; InterPro IPR014230: IPR006698; KEGG: cth:Cthe_1204 hypothetical protein; PFAM: Protein of unknown function DUF444; SPTR: UPF0229 protein CLCAR_0966/CcarbDRAFT_1092; TIGRFAM: Sporulation protein YhbH; PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH; Belongs to the UPF0229 family.


ensembl_gene_id: Sgly_1121
symbol: Sgly_1121
gene_biotype: protein_coding
description:
  SpoVR family protein; COGs: COG2719 conserved hypothetical protein; InterPro IPR007390; KEGG: ccb:Clocel_0085 SpoVR family protein; PFAM: Sporulation stage V, protein R; SPTR: SpoVR family protein; PFAM: SpoVR like protein.


ensembl_gene_id: Sgly_1123
symbol: Sgly_1123
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: clj:CLJU_c19380 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Conserved protein with HTH domain; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_1125
symbol: Sgly_1125
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: aci:ACIAD1681 major facilitator superfamily cis,cis-muconate transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily transporter permease; PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport.


ensembl_gene_id: Sgly_1127
symbol: Sgly_1127
gene_biotype: protein_coding
description:
  MaoC domain protein dehydratase; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: rpt:Rpal_3724 MaoC domain protein dehydratase; PFAM: MaoC-like dehydratase; SPTR: MaoC domain protein dehydratase; PFAM: MaoC like domain.


ensembl_gene_id: Sgly_1128
symbol: Sgly_1128
gene_biotype: protein_coding
description:
  COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: cdl:CDR20291_0366 isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase; PFAM: CoA-transferase family III; PRIAM: Formyl-CoA transferase; SPTR: Isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.


ensembl_gene_id: Sgly_1129
symbol: Sgly_1129
gene_biotype: protein_coding
description:
  o-succinylbenzoate--CoA ligase; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: rca:Rcas_1775 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: o-succinylbenzoate--CoA ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.


ensembl_gene_id: Sgly_1130
symbol: Sgly_1130
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: cac:CA_C2605 TetR/AcrR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator (TetR/AcrR family); PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region.


ensembl_gene_id: Sgly_1131
symbol: Sgly_1131
gene_biotype: protein_coding
description:
  Sodium/sulphate symporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: pth:PTH_2292 di- and tricarboxylate transporters; PFAM: Sodium/sulphate symporter; SPTR: Putative uncharacterized protein; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter.


ensembl_gene_id: Sgly_1132
symbol: Sgly_1132
gene_biotype: protein_coding
description:
  COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: drm:Dred_1490 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenases; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: Sgly_1133
symbol: Sgly_1133
gene_biotype: protein_coding
description:
  COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076; KEGG: pth:PTH_0018 dehydrogenases; PFAM: FAD dependent oxidoreductase; PRIAM: Electron-transferring-flavoprotein dehydrogenase; SPTR: Dehydrogenases; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: Sgly_1134
symbol: Sgly_1134
gene_biotype: protein_coding
description:
  COGs: COG2440 Ferredoxin-like protein; KEGG: sfu:Sfum_3926 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.


ensembl_gene_id: Sgly_1135
symbol: Sgly_1135
gene_biotype: protein_coding
description:
  COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: clj:CLJU_c39410 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein domain.


ensembl_gene_id: Sgly_1136
symbol: Sgly_1136
gene_biotype: protein_coding
description:
  COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730: IPR014731; KEGG: clj:CLJU_c39400 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: Sgly_1138
symbol: Sgly_1138
gene_biotype: protein_coding
description:
  COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: cbb:CLD_3461 aldehyde dehydrogenase family protein; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Sgly_1139
symbol: Sgly_1139
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001: IPR001650: IPR011545; KEGG: phe:Phep_3476 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Possible ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: Sgly_1140
symbol: Sgly_1140
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: cpe:CPE0716 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1144
symbol: Sgly_1144
gene_biotype: protein_coding
description:
  COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: cpf:CPF_0769 alpha/beta fold family hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase; PFAM: alpha/beta hydrolase fold.


ensembl_gene_id: Sgly_1148
symbol: Sgly_1148
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: btl:BALH_4401 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_1149
symbol: Sgly_1149
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: btb:BMB171_C4475 two component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: Sgly_1150
symbol: Sgly_1150
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cby:CLM_0389 peptide ABC transporter, Pep4E family, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1151
symbol: Sgly_1151
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; InterPro IPR003838; KEGG: bcy:Bcer98_3485 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter permease protein; PFAM: Predicted permease.


ensembl_gene_id: Sgly_1152
symbol: Sgly_1152
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: cdf:CD0463 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_1153
symbol: Sgly_1153
gene_biotype: protein_coding
description:
  KEGG: pde:Pden_4716 tripartite ATP-independent periplasmic transporter DctQ; SPTR: Tripartite ATP-independent periplasmic transporter, DctQ component.


ensembl_gene_id: Sgly_1154
symbol: Sgly_1154
gene_biotype: protein_coding
description:
  Transcriptional regulator, HxlR family; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cdl:CDR20291_1274 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.


ensembl_gene_id: Sgly_1155
symbol: Sgly_1155
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: cdl:CDR20291_1273 hypothetical protein; PFAM: Isochorismatase-like; SPTR: Putative isochorismatase (Putative uncharacterized protein); PFAM: Isochorismatase family.


ensembl_gene_id: Sgly_1157
symbol: Sgly_1157
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: cac:CA_P0087 TetR/AcrR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: HTH transcriptional regulator TetR/AcrR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_1158
symbol: Sgly_1158
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Sgly_1160
symbol: Sgly_1160
gene_biotype: protein_coding
description:
  degV family protein; COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: pmo:Pmob_1310 DegV family protein; PFAM: DegV; SPTR: DegV family protein; TIGRFAM: DegV; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family.


ensembl_gene_id: Sgly_1162
symbol: Sgly_1162
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: dae:Dtox_0859 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1164
symbol: Sgly_1164
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG1129 ABC-type sugar transport system ATPase component; KEGG: ckl:CKL_0068 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1165
symbol: Sgly_1165
gene_biotype: protein_coding
description:
  KEGG: cth:Cthe_2132 abortive infection protein, putative; SPTR: Abortive infection protein, putative.


ensembl_gene_id: Sgly_1167
symbol: Sgly_1167
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1697; COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: pjd:Pjdr2_1914 protein of unknown function DUF1697; PFAM: Protein of unknown function DUF1697; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1697).


ensembl_gene_id: Sgly_1168
symbol: ppnP
gene_biotype: protein_coding
description:
  UPF0345 protein yaiE; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: Sgly_1169
symbol: Sgly_1169
gene_biotype: protein_coding
description:
  TfoX domain-containing protein; InterPro IPR007076; KEGG: pmz:HMPREF0659_A5556 TfoX N-terminal domain protein; PFAM: TfoX, N-terminal; SPTR: Putative uncharacterized protein; PFAM: TfoX N-terminal domain.


ensembl_gene_id: Sgly_1172
symbol: Sgly_1172
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: dhd:Dhaf_2022 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_1173
symbol: Sgly_1173
gene_biotype: protein_coding
description:
  ATP-dependent transcriptional regulator, MalT-like, LuxR family; COGs: COG2909 ATP-dependent transcriptional regulator protein; InterPro IPR000792; KEGG: swo:Swol_1080 ATP-dependent transcriptional regulator-like protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.


ensembl_gene_id: Sgly_1174
symbol: Sgly_1174
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207: IPR003594: IPR002545: IPR004105; KEGG: cce:Ccel_2315 CheA signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; CheW-like protein; SMART: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SPTR: CheA signal transduction histidine kinase;  [...]


ensembl_gene_id: Sgly_1175
symbol: Sgly_1175
gene_biotype: protein_coding
description:
  CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: dae:Dtox_0612 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: CheW protein; PFAM: CheW-like domain.


ensembl_gene_id: Sgly_1176
symbol: Sgly_1176
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: cth:Cthe_0808 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase, CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase, CheR-type; SPTR: MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.


ensembl_gene_id: Sgly_1177
symbol: Sgly_1177
gene_biotype: protein_coding
description:
  CheB methylesterase; COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR000673; KEGG: cce:Ccel_2310 CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; PRIAM: Protein-glutamate methylesterase; SPTR: Response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase.


ensembl_gene_id: Sgly_1178
symbol: Sgly_1178
gene_biotype: protein_coding
description:
  CheD; COGs: COG1871 Chemotaxis protein; stimulates methylation of MCP protein; KEGG: pca:Pcar_1201 CheD-like chemotaxis protein; SPTR: Probable chemoreceptor glutamine deamidase CheD; PFAM: CheD.


ensembl_gene_id: Sgly_1179
symbol: Sgly_1179
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR003661: IPR003594: IPR013767: IPR 013656; KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; PAS fold-4; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; SPTR: PAS domain S-box domain-containing protein; TIGRFAM: PAS; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kina [...]


ensembl_gene_id: Sgly_1180
symbol: Sgly_1180
gene_biotype: protein_coding
description:
  COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: dae:Dtox_0617 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver domain protein; PFAM: Protein of unknown function (DUF2442); Response regulator receiver domain.


ensembl_gene_id: Sgly_1181
symbol: Sgly_1181
gene_biotype: protein_coding
description:
  COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089; KEGG: cbt:CLH_2362 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: Sgly_1182
symbol: Sgly_1182
gene_biotype: protein_coding
description:
  Diguanylate cyclase and metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR000014: IPR000160: IPR001610: IPR003607: IPR 013767: IPR013656: IPR006674; KEGG: tai:Taci_0162 diguanylate cyclase and metal dependent phosphohydrolase; PFAM: Diguanylate cyclase, predicted; PAS fold-4; PAS fold; Metal-dependent phosphohydrolase, HD subdomain; SMART: Diguanylate cyclase, predicted; PAS; PAC motif; Metal-dependent phosphohydrolase, HD domain; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: HD domain; GGDEF [...]


ensembl_gene_id: Sgly_1183
symbol: Sgly_1183
gene_biotype: protein_coding
description:
  Diguanylate cyclase and metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR000014: IPR000160: IPR006675: IPR003018: IPR 003607: IPR013656: IPR013767: IPR006674; KEGG: amt:Amet_0967 diguanylate cyclase and metal dependent phosphohydrolase; PFAM: Diguanylate cyclase, predicted; PAS fold; PAS fold-4; GAF; Metal-dependent phosphohydrolase, HD subdomain; SMART: Diguanylate cyclase, predicted; GAF; PAS; Metal-dependent phosphohydrolase, HD domain; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; HDIG; PFAM:  [...]


ensembl_gene_id: Sgly_1185
symbol: Sgly_1185
gene_biotype: protein_coding
description:
  COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cbe:Cbei_3526 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: Nitroreductase-like; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: Nitroreductase family.


ensembl_gene_id: Sgly_1187
symbol: Sgly_1187
gene_biotype: protein_coding
description:
  COGs: COG2378 transcriptional regulator protein; KEGG: cbe:Cbei_3345 helix-turn-helix, type 11 domain-containing protein; SPTR: Helix-turn-helix, type 11 domain protein; PFAM: HTH domain.


ensembl_gene_id: Sgly_1189
symbol: Sgly_1189
gene_biotype: protein_coding
description:
  COGs: COG3600 Uncharacterized phage-associated protein; KEGG: cth:Cthe_1643 phage-associated protein-like protein; SPTR: Uncharacterized phage-associated protein-like protein; TIGRFAM: putative zinc finger/helix-turn-helix protein, YgiT family; YgiT-type zinc finger domain.


ensembl_gene_id: Sgly_1190
symbol: Sgly_1190
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; InterPro IPR003838; KEGG: dsy:DSY1067 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.


ensembl_gene_id: Sgly_1191
symbol: Sgly_1191
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dhd:Dhaf_2148 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1192
symbol: Sgly_1192
gene_biotype: protein_coding
description:
  Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: dhd:Dhaf_2147 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_1193
symbol: Sgly_1193
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: dhd:Dhaf_2146 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; manually curated; PFAM: Response regulator receiver domain; Transcriptional regulat [...]


ensembl_gene_id: Sgly_1194
symbol: Sgly_1194
gene_biotype: protein_coding
description:
  KEGG: cyt:cce_1597 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).


ensembl_gene_id: Sgly_1196
symbol: Sgly_1196
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; InterPro IPR006339: IPR007159; KEGG: ttm:Tthe_0179 transcriptional regulator, AbrB family; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.


ensembl_gene_id: Sgly_1197
symbol: Sgly_1197
gene_biotype: protein_coding
description:
  Protein of unknown function DUF132; InterPro IPR002850: IPR006596; KEGG: ttm:Tthe_0828 PilT protein domain protein; SMART: Nucleotide binding protein, PINc; SPTR: PilT protein domain protein; TIGRFAM: Protein of unknown function DUF132; TIGRFAM: probable toxin-antitoxin system toxin component, PIN family.


ensembl_gene_id: Sgly_1198
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: Sgly_1199
symbol: Sgly_1199
gene_biotype: protein_coding
description:
  COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: aoe:Clos_0935 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel.


ensembl_gene_id: Sgly_1200
symbol: Sgly_1200
gene_biotype: protein_coding
description:
  HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402: IPR006439: IPR005834: IPR013118; KEGG: ckr:CKR_1932 hypothetical protein; PFAM: Haloacid dehalogenase-like hydrolase; Mannitol dehydrogenase, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Mannitol dehydrogenase C-terminal domain; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third mot [...]


ensembl_gene_id: Sgly_1202
symbol: Sgly_1202
gene_biotype: protein_coding
description:
  MmpL domain-containing protein; COGs: COG2409 drug exporter of the RND superfamily; KEGG: ccb:Clocel_3611 MmpL domain-containing protein; SPTR: MMPL domain protein; PFAM: MMPL family; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.


ensembl_gene_id: Sgly_1203
symbol: Sgly_1203
gene_biotype: protein_coding
description:
  KEGG: cce:Ccel_2357 transcriptional regulator, TetR family; SPTR: Transcriptional regulator, TetR family.


ensembl_gene_id: Sgly_1204
symbol: Sgly_1204
gene_biotype: protein_coding
description:
  Response regulator receiver; InterPro IPR001789; KEGG: dhd:Dhaf_0512 response regulator receiver and SARP domain protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain.


ensembl_gene_id: Sgly_1205
symbol: Sgly_1205
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ere:EUBREC_2448 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_1206
symbol: Sgly_1206
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase (NADPH); COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155: IPR013027; KEGG: tte:TTE2131 NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: 2,4-dienoyl-CoA reductase (NADPH); SPTR: NADH:flavin oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.


ensembl_gene_id: Sgly_1207
symbol: Sgly_1207
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dhd:Dhaf_4772 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1209
symbol: Sgly_1209
gene_biotype: protein_coding
description:
  InterPro IPR011733; KEGG: tde:TDE2624 hypothetical protein; PFAM: Conserved hypothetical CHP02185, integral membrane; SPTR: Conserved hypothetical integral membrane protein TIGR02185; TIGRFAM: Conserved hypothetical CHP02185, integral membrane; PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep); TIGRFAM: conserved hypothetical integral membrane protein TIGR02185.


ensembl_gene_id: Sgly_1210
symbol: Sgly_1210
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: dsy:DSY4740 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_1211
symbol: Sgly_1211
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: cbi:CLJ_B1642 AraC family regulatory protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family regulatory protein; PFAM: helix-turn-helix, Psq domain; Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Sgly_1212
symbol: Sgly_1212
gene_biotype: protein_coding
description:
  FeoA family protein; InterPro IPR007167; KEGG: fma:FMG_0977 hypothetical protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: Putative uncharacterized protein; PFAM: FeoA domain.


ensembl_gene_id: Sgly_1213
symbol: Sgly_1213
gene_biotype: protein_coding
description:
  Small GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: Sgly_1214
symbol: Sgly_1214
gene_biotype: protein_coding
description:
  KEGG: alv:Alvin_1524 protein of unknown function DUF1920; SPTR: Putative uncharacterized protein; PFAM: FeoC like transcriptional regulator.


ensembl_gene_id: Sgly_1216
symbol: Sgly_1216
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2089; InterPro IPR018658; KEGG: cpy:Cphy_1605 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function(DUF2089).


ensembl_gene_id: Sgly_1217
symbol: Sgly_1217
gene_biotype: protein_coding
description:
  KEGG: dae:Dtox_0423 transcriptional regulator, AraC family; SPTR: Transcriptional regulator, AraC family.


ensembl_gene_id: Sgly_1218
symbol: Sgly_1218
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060: IPR000005; KEGG: dae:Dtox_0423 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Sgly_1220
symbol: Sgly_1220
gene_biotype: protein_coding
description:
  KEGG: sun:SUN_0956 hypothetical protein; SPTR: Ribose ABC transporter, periplasmic ribose-binding protein.


ensembl_gene_id: Sgly_1221
symbol: Sgly_1221
gene_biotype: protein_coding
description:
  Fibronectin type III domain protein; COGs: COG5263 FOG: Glucan-binding domain (YG repeat); InterPro IPR003961: IPR013378: IPR001119: IPR002479; KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein; PFAM: Fibronectin, type III; Listeria/Bacterioides repeat; S-layer homology domain; Putative cell wall binding repeat; SPTR: Fibronectin type III domain protein; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); S-layer homology domain; Fibronectin type III domain.


ensembl_gene_id: Sgly_1223
symbol: Sgly_1223
gene_biotype: protein_coding
description:
  Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: esi:Exig_1132 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Isochorismatase family protein; PFAM: Isochorismatase family.


ensembl_gene_id: Sgly_1224
symbol: Sgly_1224
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG2378 transcriptional regulator protein; KEGG: lin:lin0464 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: HTH domain.


ensembl_gene_id: Sgly_1225
symbol: Sgly_1225
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_2218 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3102).


ensembl_gene_id: Sgly_1226
symbol: Sgly_1226
gene_biotype: protein_coding
description:
  InterPro IPR012454; KEGG: dhd:Dhaf_2355 protein of unknown function DUF1659; PFAM: Protein of unknown function DUF1659; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1659).


ensembl_gene_id: Sgly_1227
symbol: Sgly_1227
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_3927 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2922).


ensembl_gene_id: Sgly_1228
symbol: Sgly_1228
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: cdl:CDR20291_0863 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.


ensembl_gene_id: Sgly_1229
symbol: Sgly_1229
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ckr:CKR_3132 hypothetical protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1230
symbol: Sgly_1230
gene_biotype: protein_coding
description:
  COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: ckr:CKR_3133 hypothetical protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_1231
symbol: Sgly_1231
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: cbb:CLD_0058 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_1232
symbol: Sgly_1232
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: ckr:CKR_0730 hypothetical protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_1233
symbol: Sgly_1233
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR001140: IPR003439; KEGG: ckr:CKR_0729 hypothetical protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_1234
symbol: Sgly_1234
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: ckr:CKR_0728 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_1235
symbol: Sgly_1235
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: bmq:BMQ_3255 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_1236
symbol: Sgly_1236
gene_biotype: protein_coding
description:
  ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ere:EUBREC_3044 YcbN; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1241
symbol: Sgly_1241
gene_biotype: protein_coding
description:
  KEGG: ccb:Clocel_4234 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel.


ensembl_gene_id: Sgly_1245
symbol: Sgly_1245
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: cby:CLM_0623 efflux ABC transporter, permease protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.


ensembl_gene_id: Sgly_1246
symbol: Sgly_1246
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cce:Ccel_0557 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1247
symbol: Sgly_1247
gene_biotype: protein_coding
description:
  Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: cdf:CD1956 two-component sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: Sgly_1248
symbol: Sgly_1248
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: cdf:CD1957 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: Sgly_1250
symbol: Sgly_1250
gene_biotype: protein_coding
description:
  Regulatory protein TetR; InterPro IPR001647; KEGG: dhd:Dhaf_2118 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.


ensembl_gene_id: Sgly_1251
symbol: Sgly_1251
gene_biotype: protein_coding
description:
  COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dhd:Dhaf_2117 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1252
symbol: Sgly_1252
gene_biotype: protein_coding
description:
  ABC-2 type transporter; InterPro IPR013525; KEGG: dhd:Dhaf_2116 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.


ensembl_gene_id: Sgly_1253
symbol: Sgly_1253
gene_biotype: protein_coding
description:
  Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: dhd:Dhaf_2115 secretion protein HlyD family protein; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD family protein; PFAM: HlyD family secretion protein.


ensembl_gene_id: Sgly_1254
symbol: Sgly_1254
gene_biotype: protein_coding
description:
  Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ccv:CCV52592_1447 RRF2 family protein; PFAM: Transcription regulator Rrf2; SPTR: RRF2 family protein; PFAM: Transcriptional regulator.


ensembl_gene_id: Sgly_1255
symbol: Sgly_1255
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase (quinone); COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: sga:GALLO_0139 putative NADPH-quinone reductase; PFAM: Flavodoxin-like fold; SPTR: Putative NADPH-quinone reductase; PFAM: Flavodoxin-like fold.


ensembl_gene_id: Sgly_1256
symbol: Sgly_1256
gene_biotype: protein_coding
description:
  KEGG: cbe:Cbei_2720 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.


ensembl_gene_id: Sgly_1258
symbol: sbcD
gene_biotype: protein_coding
description:
  Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: Sgly_1259
symbol: Sgly_1259
gene_biotype: protein_coding
description:
  SMC domain-containing protein; COGs: COG0419 ATPase involved in DNA repair; KEGG: cpy:Cphy_1246 SMC domain-containing protein; SPTR: SMC domain protein; TIGRFAM: exonuclease SbcC.


ensembl_gene_id: Sgly_1260
symbol: Sgly_1260
gene_biotype: protein_coding
description:
  Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR006404: IPR006416: IPR001757: IPR008250: IPR 005834; KEGG: dae:Dtox_2543 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolas [...]


ensembl_gene_id: Sgly_1261
symbol: Sgly_1261
gene_biotype: protein_coding
description:
  Protein of unknown function DUF156; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: clj:CLJU_c32140 hypothetical protein; PFAM: Protein of unknown function DUF156; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937.


ensembl_gene_id: Sgly_1262
symbol: Sgly_1262
gene_biotype: protein_coding
description:
  KEGG: clj:CLJU_c13990 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: FeoC like transcriptional regulator.


ensembl_gene_id: Sgly_1264
symbol: Sgly_1264
gene_biotype: protein_coding
description:
  FeoA family protein; InterPro IPR007167; KEGG: bpb:bpr_III198 ferrous iron transport protein A FeoA2; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: Conserved domain protein; PFAM: FeoA domain.


ensembl_gene_id: Sgly_1265
symbol: Sgly_1265
gene_biotype: protein_coding
description:
  Regulatory protein MarR; InterPro IPR000835; KEGG: ssm:Spirs_3509 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.


ensembl_gene_id: Sgly_1267
symbol: Sgly_1267
gene_biotype: protein_coding
description:
  InterPro IPR007522; KEGG: ttm:Tthe_0936 CRISPR-associated RAMP protein, Cmr1 family; SPTR: CRISPR-associated RAMP protein, Cmr1 family; TIGRFAM: CRISPR-associated protein TM1795 family, N-terminal; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family.


ensembl_gene_id: Sgly_1268
symbol: Sgly_1268
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Crm2 family; COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); InterPro IPR013407; KEGG: cts:Ctha_0947 CRISPR-associated protein, Crm2 family; SPTR: CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Crm2; PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Crm2 family.


ensembl_gene_id: Sgly_1269
symbol: Sgly_1269
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cmr3; COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR019117; KEGG: ttm:Tthe_0938 CRISPR-associated protein, Cmr3 family; PFAM: CRISPR-associated protein, Cmr3; SPTR: CRISPR-associated protein, Cmr3 family; PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR-associated protein, Cmr3 family.


ensembl_gene_id: Sgly_1270
symbol: Sgly_1270
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP protein, Cmr4 family; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537: IPR013410; KEGG: cts:Ctha_0944 CRISPR-associated RAMP protein, Cmr4 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP Cmr4; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family.


ensembl_gene_id: Sgly_1271
symbol: Sgly_1271
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cmr5 family; COGs: COG3337 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010160; KEGG: gyc:GYMC61_1197 CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein, TM1791.1; SPTR: CRISPR-associated protein, Cmr5 family; TIGRFAM: CRISPR-associated protein, TM1791.1; PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR-associated protein, Cmr5 family.


ensembl_gene_id: Sgly_1272
symbol: Sgly_1272
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP protein, Cmr6 family; COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537: IPR010172; KEGG: ttm:Tthe_0942 CRISPR-associated RAMP protein, Cmr6 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated protein, TM1791; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family.


ensembl_gene_id: Sgly_1278
symbol: Sgly_1278
gene_biotype: protein_coding
description:
  Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: hmo:HM1_2921 hypothetical protein; PFAM: Penicillinase repressor; SPTR: Putative uncharacterized protein; PFAM: Penicillinase repressor.


ensembl_gene_id: Sgly_1279
symbol: Sgly_1279
gene_biotype: protein_coding
description:
  Peptidase M56 BlaR1; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: ckr:CKR_3089 hypothetical protein; PFAM: Peptidase M56, BlaR1; SPTR: Putative uncharacterized protein; PFAM: BlaR1 peptidase M56.


ensembl_gene_id: Sgly_1282
symbol: Sgly_1282
gene_biotype: protein_coding
description:
  KEGG: dhd:Dhaf_3330 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily.


ensembl_gene_id: Sgly_1283
symbol: Sgly_1283
gene_biotype: protein_coding
description:
  VanZ family protein; InterPro IPR006976; KEGG: cbe:Cbei_3639 VanZ family protein; PFAM: VanZ-like; SPTR: VanZ family protein; PFAM: VanZ like family.


ensembl_gene_id: Sgly_1286
symbol: Sgly_1286
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dhd:Dhaf_2664 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1288
symbol: Sgly_1288
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: dsy:DSY1530 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1291
symbol: Sgly_1291
gene_biotype: protein_coding
description:
  Transcriptional regulator, HxlR family; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: clj:CLJU_c32250 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix.


ensembl_gene_id: Sgly_1292
symbol: Sgly_1292
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; COGs: COG3871 Uncharacterized stress protein (general stress protein 26); InterPro IPR011576; KEGG: bth:BT_1384 hypothetical protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Sgly_1293
symbol: Sgly_1293
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: bts:Btus_0293 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma C factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1295
symbol: Sgly_1295
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dae:Dtox_0648 prevent-host-death family protein; SPTR: Prevent-host-death family protein.


ensembl_gene_id: Sgly_1299
symbol: Sgly_1299
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: bpb:bpr_III183 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Putative uncharacterized protein; PFAM: MerR family regulatory protein.


ensembl_gene_id: Sgly_1301
symbol: Sgly_1301
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ecb:100070369 similar to kinesin family member 21A; SPTR: Acyl carrier protein phosphodiesterase.


ensembl_gene_id: Sgly_1302
symbol: Sgly_1302
gene_biotype: protein_coding
description:
  COGs: COG0426 flavoprotein; KEGG: sew:SeSA_B0086 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily.


ensembl_gene_id: Sgly_1304
symbol: Sgly_1304
gene_biotype: protein_coding
description:
  Helix-turn-helix type 11 domain protein; COGs: COG2378 transcriptional regulator protein; KEGG: dhd:Dhaf_0764 helix-turn-helix type 11 domain protein; SPTR: Helix-turn-helix type 11 domain protein; PFAM: HTH domain.


ensembl_gene_id: Sgly_1305
symbol: Sgly_1305
gene_biotype: protein_coding
description:
  Transcription activator effector binding protein; COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: dhd:Dhaf_0763 transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding; SPTR: Transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding domain.


ensembl_gene_id: Sgly_1307
symbol: Sgly_1307
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: dae:Dtox_2680 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Sgly_1308
symbol: Sgly_1308
gene_biotype: protein_coding
description:
  InterPro IPR011733; KEGG: clo:HMPREF0868_0145 conserved hypothetical protein TIGR02185; PFAM: Conserved hypothetical CHP02185, integral membrane; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical CHP02185, integral membrane; PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep); TIGRFAM: conserved hypothetical integral membrane protein TIGR02185.


ensembl_gene_id: Sgly_1309
symbol: Sgly_1309
gene_biotype: protein_coding
description:
  COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439: IPR003339: IPR003593; KEGG: cbl:CLK_1526 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Cobalt transport protein; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; Cobalt transport protein.


ensembl_gene_id: Sgly_1312
symbol: Sgly_1312
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: cbb:CLD_0298 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_1314
symbol: Sgly_1314
gene_biotype: protein_coding
description:
  COGs: COG2312 Erythromycin esterase homolog; InterPro IPR007815; KEGG: bbe:BBR47_50440 hypothetical protein; PFAM: Erythromycin esterase; SPTR: Erythromycin esterase; PFAM: Erythromycin esterase.


ensembl_gene_id: Sgly_1315
symbol: Sgly_1315
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, GntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839; KEGG: ckr:CKR_0384 hypothetical protein; PFAM: Aminotransferase, class I/II; PRIAM: Aromatic-amino-acid transaminase; SPTR: Putative uncharacterized protein; PFAM: Aminotransferase class I and II.


ensembl_gene_id: Sgly_1317
symbol: Sgly_1317
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; COGs: COG1124 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dsy:DSY0385 hypothetical protein; PFAM: ABC transporter-like; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1318
symbol: Sgly_1318
gene_biotype: protein_coding
description:
  COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dhd:Dhaf_0329 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_1319
symbol: Sgly_1319
gene_biotype: protein_coding
description:
  COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dsy:DSY0387 hypothetical protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_1320
symbol: Sgly_1320
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: dsy:DSY0388 hypothetical protein; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.


ensembl_gene_id: Sgly_1322
symbol: Sgly_1322
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: aap:NT05HA_0673 putative lysogenic conversion protein; SPTR: Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.


ensembl_gene_id: Sgly_1324
symbol: Sgly_1324
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mau:Micau_4361 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.


ensembl_gene_id: Sgly_1325
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: Sgly_1326
symbol: Sgly_1326
gene_biotype: protein_coding
description:
  Protein of unknown function DUF343; InterPro IPR005651; KEGG: rer:RER_32750 hypothetical protein; PFAM: Protein of unknown function DUF343; SPTR: Putative uncharacterized protein; PFAM: Trm112p-like protein.


ensembl_gene_id: Sgly_1327
symbol: Sgly_1327
gene_biotype: protein_coding
description:
  COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: bpb:bpr_I0780 flavin reductase domain-containing protein; PFAM: Flavin reductase-like, FMN-binding; SPTR: Flavoredoxin; PFAM: Flavin reductase like domain.


ensembl_gene_id: Sgly_1329
symbol: ecfA
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: Sgly_1330
symbol: ecfA-2
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: Sgly_1331
symbol: Sgly_1331
gene_biotype: protein_coding
description:
  COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: ctc:CTC02574 cobalt transport protein CbiQ; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein cbiQ; PFAM: Cobalt transport protein.


ensembl_gene_id: Sgly_1332
symbol: Sgly_1332
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: dhd:Dhaf_2113 RNA polymerase factor sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1335
symbol: Sgly_1335
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ctc:CTC00641 transcriptional regulatory protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; PFAM: Helix-turn-helix.


ensembl_gene_id: Sgly_1337
symbol: Sgly_1337
gene_biotype: protein_coding
description:
  Sirohydrochlorin cobaltochelatase; COGs: COG4822 Cobalamin biosynthesis protein CbiK Co2+ chelatase; InterPro IPR010388; KEGG: mru:mru_0895 cobalt chelatase CbiK; PFAM: Anaerobic cobalt chelatase; PRIAM: Sirohydrochlorin cobaltochelatase; SPTR: Putative uncharacterized protein; PFAM: Cobalt chelatase (CbiK).


ensembl_gene_id: Sgly_1340
symbol: Sgly_1340
gene_biotype: protein_coding
description:
  Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: shi:Shel_24460 ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein; SPTR: Putative ferrichrome-binding periplasmic protein; PFAM: Periplasmic binding protein.


ensembl_gene_id: Sgly_1341
symbol: Sgly_1341
gene_biotype: protein_coding
description:
  COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ere:EUBREC_1928 iron compound ABC transporter, permease protein, putative; PFAM: Bacterial transport system permease protein; SPTR: Putative uncharacterized protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Sgly_1342
symbol: Sgly_1342
gene_biotype: protein_coding
description:
  Iron-chelate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: ere:EUBREC_1927 ferric enterobactin transport ATP-binding protein FepC; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1343
symbol: Sgly_1343
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: dhd:Dhaf_4771 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: Sgly_1344
symbol: Sgly_1344
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: cby:CLM_2586 putative ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, permease/ATP-binding protein; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: Sgly_1345
symbol: Sgly_1345
gene_biotype: protein_coding
description:
  COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: cby:CLM_2585 putative ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, permease/ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: Sgly_1347
symbol: Sgly_1347
gene_biotype: protein_coding
description:
  Peptidase C11 clostripain; InterPro IPR005077; KEGG: bpb:bpr_I2934 cysteine protease C11 family protein; PFAM: Peptidase C11, clostripain; SPTR: Peptidase C11 clostripain; PFAM: Clostripain family.


ensembl_gene_id: Sgly_1352
symbol: Sgly_1352
gene_biotype: protein_coding
description:
  Hedgehog/intein hint domain protein; InterPro IPR006141: IPR003587; KEGG: pay:PAU_02970 hypothetical protein; SMART: Hedgehog/intein hint, N-terminal; SPTR: Putative uncharacterized protein; PFAM: Hint module; TIGRFAM: intein N-terminal splicing region.


ensembl_gene_id: Sgly_1354
symbol: Sgly_1354
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pfr:PFREUD_18870 Methylmalonyl-CoA carboxytransferase 5S subunit. (transcarboxylase 5S) 505 bp; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1356
symbol: Sgly_1356
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dan:Dana_GF17556 GF17556 gene product from transcript GF17556-RA; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1358
symbol: Sgly_1358
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: cno:NT01CX_1174 ECF subfamily RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily, putative; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1360
symbol: Sgly_1360
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cpy:Cphy_0914 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1363
symbol: Sgly_1363
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: ckr:CKR_1639 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: Sgly_1364
symbol: Sgly_1364
gene_biotype: protein_coding
description:
  Major facilitator superfamily MFS_1; COGs: COG2807 Cyanate permease; InterPro IPR011701; KEGG: bld:BLi04347 YycB; PFAM: Major facilitator superfamily MFS-1; SPTR: Cyanate transport system protein; PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter.


ensembl_gene_id: Sgly_1367
symbol: Sgly_1367
gene_biotype: protein_coding
description:
  Flavodoxin; KEGG: ttm:Tthe_0874 flavodoxin; SPTR: Putative uncharacterized protein; PFAM: Flavodoxin-like fold.


ensembl_gene_id: Sgly_1368
symbol: Sgly_1368
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1801; COGs: COG5646 conserved hypothetical protein; InterPro IPR014922; KEGG: bld:BLi03403 YdhG; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein ydhG; PFAM: Domain of unknown function (DU1801).


ensembl_gene_id: Sgly_1369
symbol: Sgly_1369
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG3910 ATPase; KEGG: ere:EUBREC_3049 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Sgly_1370
symbol: Sgly_1370
gene_biotype: protein_coding
description:
  Domain of unknown function DUF1801; COGs: COG5646 conserved hypothetical protein; InterPro IPR014922; KEGG: dae:Dtox_0462 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DU1801).


ensembl_gene_id: Sgly_1371
symbol: Sgly_1371
gene_biotype: protein_coding
description:
  COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: dae:Dtox_0463 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2200).


ensembl_gene_id: Sgly_1372
symbol: Sgly_1372
gene_biotype: protein_coding
description:
  Methyltransferase type 12; COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR013217; KEGG: dsy:DSY3477 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain.


ensembl_gene_id: Sgly_1373
symbol: Sgly_1373
gene_biotype: protein_coding
description:
  Transcriptional regulator, PucR family; COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR012914; KEGG: cbe:Cbei_1935 PucR family transcriptional regulator; PFAM: Purine catabolism PurC-like; SPTR: Putative uncharacterized protein; PFAM: Purine catabolism regulatory protein-like family.


ensembl_gene_id: Sgly_1374
symbol: Sgly_1374
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814; KEGG: ckr:CKR_2120 hypothetical protein; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Putative uncharacterized protein; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Sgly_1375
symbol: Sgly_1375
gene_biotype: protein_coding
description:
  COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: cth:Cthe_2579 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; PRIAM: Alcohol dehydrogenase; SPTR: Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase.


ensembl_gene_id: Sgly_1376
symbol: Sgly_1376
gene_biotype: protein_coding
description:
  Peptidase dimerization domain protein; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: cby:CLM_3278 peptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase.


ensembl_gene_id: Sgly_1377
symbol: Sgly_1377
gene_biotype: protein_coding
description:
  Peptidase dimerization domain protein; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: aco:Amico_0203 peptidase M20; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase.


ensembl_gene_id: Sgly_1378
symbol: Sgly_1378
gene_biotype: protein_coding
description:
  Dihydropyrimidinase; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680: IPR011778; KEGG: cbe:Cbei_1942 dihydropyrimidinase; PFAM: Amidohydrolase 1; PRIAM: Dihydropyrimidinase; SPTR: Dihydropyrimidinase; TIGRFAM: D-hydantoinase; PFAM: Amidohydrolase family; Urease alpha-subunit, N-terminal domain; TIGRFAM: D-hydantoinase; dihydroorotase, multifunctional complex type.


ensembl_gene_id: Sgly_1379
symbol: Sgly_1379
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase B, catalytic subunit; COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135: IPR005720; KEGG: cbe:Cbei_1943 dihydropyrimidine dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; PRIAM: Dihydropyrimidine dehydrogenase (NADP(+)); SPTR: Dihydroorotate dehydrogenase family protein; TIGRFAM: Dihydroorotate dehydrogenase, class 1, core; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein.


ensembl_gene_id: Sgly_1380
symbol: Sgly_1380
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cbe:Cbei_1938 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.


ensembl_gene_id: Sgly_1381
symbol: Sgly_1381
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cbe:Cbei_1939 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_1382
symbol: Sgly_1382
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cbe:Cbei_1940 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: Sgly_1383
symbol: Sgly_1383
gene_biotype: protein_coding
description:
  NMT1/THI5-like protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: cbe:Cbei_1941 NMT1/THI5-like protein; SPTR: NMT1/THI5-like protein; PFAM: NMT1/THI5 like.


ensembl_gene_id: Sgly_1384
symbol: Sgly_1384
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas6; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743: IPR010156; KEGG: dae:Dtox_0913 CRISPR-associated protein Cas6; PFAM: Protein of unknown function DUF57; SPTR: CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein, Cas6; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6.


ensembl_gene_id: Sgly_1385
symbol: Sgly_1385
gene_biotype: protein_coding
description:
  InterPro IPR019121: IPR010180; KEGG: dae:Dtox_0914 CRISPR-associated CXXC_CXXC protein Cst1; PFAM: CRISPR-associated protein, CXXC-CXXC region; SPTR: CRISPR-associated CXXC_CXXC protein Cst1; TIGRFAM: CRISPR-associated protein, CXXC-CXXC; PFAM: CRISPR-associated protein (Cas_CXXC_CXXC); TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1.


ensembl_gene_id: Sgly_1386
symbol: Sgly_1386
gene_biotype: protein_coding
description:
  CRISPR-associated autoregulator, Cst2 family; COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154: IPR013414; KEGG: dae:Dtox_0915 CRISPR-associated autoregulator, DevR family; SPTR: CRISPR-associated autoregulator, DevR family; TIGRFAM: CRISPR-associated regulatory DevR; CRISPR-associated negative autoregulator; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family.


ensembl_gene_id: Sgly_1387
symbol: Sgly_1387
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas5t family; InterPro IPR013337: IPR013422; KEGG: dae:Dtox_0916 CRISPR-associated protein Cas5; SPTR: CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5, Tneap type; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, Tneap subtype; CRISPR-associated protein Cas5, N-terminal domain.


ensembl_gene_id: Sgly_1388
symbol: Sgly_1388
gene_biotype: protein_coding
description:
  CRISPR-associated helicase Cas3; COGs: COG1203 helicase; InterPro IPR006483: IPR006474: IPR014001; KEGG: dae:Dtox_0917 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase, N-terminal; SPTR: CRISPR-associated helicase Cas3; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; PFAM: HD domain; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.


