# geneInfo

ensembl_gene_id: DSJ_11910
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar export apparatus protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: DSJ_11915
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: DSJ_11920
symbol: DSJ_11920
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_11925
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: DSJ_11930
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: DSJ_11935
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: DSJ_11940
symbol: DSJ_11940
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_11945
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis chaperone FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family.


ensembl_gene_id: DSJ_11950
symbol: fliI
gene_biotype: protein_coding
description:
  Flagellum-specific ATP synthase FliI; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_11955
symbol: fliH
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_11960
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: DSJ_11965
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: DSJ_11970
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body complex protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_11985
symbol: DSJ_11985
gene_biotype: protein_coding
description:
  S-adenosylmethionine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MT-A70-like family.


ensembl_gene_id: DSJ_12085
symbol: DSJ_12085
gene_biotype: protein_coding
description:
  Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12090
symbol: DSJ_12090
gene_biotype: protein_coding
description:
  DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12120
symbol: DSJ_12120
gene_biotype: protein_coding
description:
  Protein ninB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12130
symbol: DSJ_12130
gene_biotype: protein_coding
description:
  Protein ninH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12145
symbol: DSJ_12145
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC; Belongs to the rusA family.


ensembl_gene_id: DSJ_12165
symbol: DSJ_12165
gene_biotype: protein_coding
description:
  DUF2570 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12170
symbol: DSJ_12170
gene_biotype: protein_coding
description:
  Rha family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12190
symbol: DSJ_12190
gene_biotype: protein_coding
description:
  DNA-packaging protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12205
symbol: DSJ_12205
gene_biotype: protein_coding
description:
  P22 coat - protein 5 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12260
symbol: DSJ_12260
gene_biotype: protein_coding
description:
  Arc family DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12270
symbol: DSJ_12270
gene_biotype: protein_coding
description:
  Antirepressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12290
symbol: DSJ_12290
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12295
symbol: DSJ_12295
gene_biotype: protein_coding
description:
  Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12330
symbol: DSJ_12330
gene_biotype: protein_coding
description:
  ISL3 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12335
symbol: DSJ_12335
gene_biotype: protein_coding
description:
  Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12340
symbol: DSJ_12340
gene_biotype: protein_coding
description:
  DNA polymerase V; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12345
symbol: DSJ_12345
gene_biotype: protein_coding
description:
  Phage repressor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12355
symbol: DSJ_12355
gene_biotype: protein_coding
description:
  IS110 family transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12365
symbol: DSJ_12365
gene_biotype: protein_coding
description:
  DinI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12390
symbol: DSJ_12390
gene_biotype: protein_coding
description:
  Alpha-amylase; Converts 1,4-alpha-D-glucans to maltodextrin; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12395
symbol: fliS
gene_biotype: protein_coding
description:
  Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12400
symbol: DSJ_12400
gene_biotype: protein_coding
description:
  Flagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: DSJ_12405
symbol: DSJ_12405
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: DSJ_12415
symbol: DSJ_12415
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12425
symbol: DSJ_12425
gene_biotype: protein_coding
description:
  Aminotransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12475
symbol: DSJ_12475
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: DSJ_12480
symbol: DSJ_12480
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: DSJ_12485
symbol: DSJ_12485
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: DSJ_12490
symbol: DSJ_12490
gene_biotype: protein_coding
description:
  HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12495
symbol: fliA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: DSJ_12500
symbol: DSJ_12500
gene_biotype: protein_coding
description:
  Flagellar regulatory protein FliZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12505
symbol: dcyD
gene_biotype: protein_coding
description:
  D-cysteine desulfhydrase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.


ensembl_gene_id: DSJ_12510
symbol: fliY
gene_biotype: protein_coding
description:
  Cystine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: DSJ_12515
symbol: yecS
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12520
symbol: yecC
gene_biotype: protein_coding
description:
  L-cystine ABC transporter ATP-binding protein YecC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12525
symbol: DSJ_12525
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12535
symbol: ychF
gene_biotype: protein_coding
description:
  Redox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: DSJ_12540
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: DSJ_12555
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: DSJ_12560
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol; Belongs to the GHMP kinase family. IspE subfamily.


ensembl_gene_id: DSJ_12565
symbol: lolB
gene_biotype: protein_coding
description:
  Lipoprotein localization factor LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: DSJ_12570
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: DSJ_12575
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: DSJ_12580
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: DSJ_12585
symbol: DSJ_12585
gene_biotype: protein_coding
description:
  Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12595
symbol: kdsA
gene_biotype: protein_coding
description:
  3-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: DSJ_12600
symbol: chaA
gene_biotype: protein_coding
description:
  Sodium-potassium/proton antiporter ChaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12605
symbol: chaB
gene_biotype: protein_coding
description:
  Cation transport regulator; In Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA; has weak affinity for calcium and magnesium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12610
symbol: chaC
gene_biotype: protein_coding
description:
  Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: DSJ_12615
symbol: DSJ_12615
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12625
symbol: DSJ_12625
gene_biotype: protein_coding
description:
  Serine/threonine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12630
symbol: DSJ_12630
gene_biotype: protein_coding
description:
  Type VI secretion system, core protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12635
symbol: DSJ_12635
gene_biotype: protein_coding
description:
  Type VI secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12640
symbol: DSJ_12640
gene_biotype: protein_coding
description:
  Type VI secretion system protein ImpL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12655
symbol: DSJ_12655
gene_biotype: protein_coding
description:
  Transcription antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12660
symbol: DSJ_12660
gene_biotype: protein_coding
description:
  Nitrate/bicarbonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12665
symbol: DSJ_12665
gene_biotype: protein_coding
description:
  Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12670
symbol: DSJ_12670
gene_biotype: protein_coding
description:
  Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12675
symbol: DSJ_12675
gene_biotype: protein_coding
description:
  Nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: DSJ_12680
symbol: DSJ_12680
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: DSJ_12685
symbol: DSJ_12685
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: DSJ_12695
symbol: DSJ_12695
gene_biotype: protein_coding
description:
  D-threitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12735
symbol: DSJ_12735
gene_biotype: protein_coding
description:
  SDR family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12745
symbol: DSJ_12745
gene_biotype: protein_coding
description:
  Invasin; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12755
symbol: astC
gene_biotype: protein_coding
description:
  Porin OmpC; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: DSJ_12760
symbol: astA
gene_biotype: protein_coding
description:
  Arginine N-succinyltransferase; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.


ensembl_gene_id: DSJ_12765
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: DSJ_12770
symbol: astB
gene_biotype: protein_coding
description:
  N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: DSJ_12775
symbol: astE
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.


ensembl_gene_id: DSJ_12780
symbol: spy
gene_biotype: protein_coding
description:
  ATP-independent periplasmic protein-refolding chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12785
symbol: cho
gene_biotype: protein_coding
description:
  Endonuclease; 3' incision activity; acts with UvrC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12795
symbol: nadE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: DSJ_12800
symbol: DSJ_12800
gene_biotype: protein_coding
description:
  Bcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12805
symbol: osmE
gene_biotype: protein_coding
description:
  Transcriptional regulator; Osmotically-inducible lipoprotein E; activator of ntr-like gene protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12815
symbol: ydjN
gene_biotype: protein_coding
description:
  L-cystine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: DSJ_12830
symbol: yniB
gene_biotype: protein_coding
description:
  2-deoxyglucose-6-phosphatase; YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12835
symbol: yniA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the fructosamine kinase family.


ensembl_gene_id: DSJ_12850
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: DSJ_12855
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: DSJ_12860
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: DSJ_12865
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: DSJ_12875
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: DSJ_12880
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: DSJ_12885
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: DSJ_12890
symbol: btuC
gene_biotype: protein_coding
description:
  Vitamin B12 ABC transporter permease BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.


ensembl_gene_id: DSJ_12900
symbol: btuE
gene_biotype: protein_coding
description:
  Similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12905
symbol: btuD
gene_biotype: protein_coding
description:
  Vitamin B12 ABC transporter ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.


ensembl_gene_id: DSJ_12910
symbol: nlpC
gene_biotype: protein_coding
description:
  Endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12915
symbol: DSJ_12915
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12930
symbol: aroH
gene_biotype: protein_coding
description:
  Hypothetical protein; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: DSJ_12935
symbol: ydiA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: DSJ_12940
symbol: pps
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: DSJ_12960
symbol: sufA
gene_biotype: protein_coding
description:
  Fe-S cluster assembly scaffold SufA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: DSJ_12965
symbol: sufB
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12970
symbol: sufC
gene_biotype: protein_coding
description:
  Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12975
symbol: sufD
gene_biotype: protein_coding
description:
  FeS cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12980
symbol: sufS
gene_biotype: protein_coding
description:
  Bifunctional cysteine desulfurase/selenocysteine lyase; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo.


ensembl_gene_id: DSJ_12985
symbol: sufE
gene_biotype: protein_coding
description:
  Cysteine desufuration protein SufE; Acts with SufS to catalyze the formation of L-alanine from L-cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_12995
symbol: lpp
gene_biotype: protein_coding
description:
  L,D-transpeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13000
symbol: pykF
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.


ensembl_gene_id: DSJ_13020
symbol: mdtK
gene_biotype: protein_coding
description:
  MATE family efflux transporter; Multidrug efflux pump that functions probably as a Na(+)/drug antiporter; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MdtK subfamily.


ensembl_gene_id: DSJ_13025
symbol: ribC
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13035
symbol: ydhC
gene_biotype: protein_coding
description:
  Cyclopropane-fatty-acyl-phospholipid synthase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13045
symbol: purR
gene_biotype: protein_coding
description:
  Transcriptional repressor PurR; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression.


ensembl_gene_id: DSJ_13055
symbol: grxD
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin, Grx4 family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: DSJ_13060
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: DSJ_13065
symbol: gloA
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: DSJ_13070
symbol: nemA
gene_biotype: protein_coding
description:
  N-ethylmaleimide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13075
symbol: DSJ_13075
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13080
symbol: ydhL
gene_biotype: protein_coding
description:
  DUF1289 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13090
symbol: DSJ_13090
gene_biotype: protein_coding
description:
  Oxidoreductase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13100
symbol: sodC
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: DSJ_13120
symbol: DSJ_13120
gene_biotype: protein_coding
description:
  Fusaric acid resistance protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13150
symbol: slyA
gene_biotype: protein_coding
description:
  Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family.


ensembl_gene_id: DSJ_13160
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: DSJ_13200
symbol: DSJ_13200
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13205
symbol: DSJ_13205
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: DSJ_13210
symbol: DSJ_13210
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13215
symbol: DSJ_13215
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13230
symbol: DSJ_13230
gene_biotype: protein_coding
description:
  Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: DSJ_13240
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: DSJ_13245
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: DSJ_13250
symbol: pdxY
gene_biotype: protein_coding
description:
  Pyridoxal kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.


ensembl_gene_id: DSJ_13255
symbol: gst
gene_biotype: protein_coding
description:
  Glutathione transferase GstA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: DSJ_13260
symbol: tppB
gene_biotype: protein_coding
description:
  Dipeptide/tripeptide permease A; Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily.


ensembl_gene_id: DSJ_13270
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: DSJ_13275
symbol: rsxE
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: DSJ_13280
symbol: rsxG
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: DSJ_13285
symbol: rsxD
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: DSJ_13290
symbol: rsxC
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: DSJ_13295
symbol: rsxB
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: DSJ_13300
symbol: rsxA
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: DSJ_13315
symbol: DSJ_13315
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: DSJ_13340
symbol: DSJ_13340
gene_biotype: protein_coding
description:
  RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13350
symbol: DSJ_13350
gene_biotype: protein_coding
description:
  Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: DSJ_13360
symbol: DSJ_13360
gene_biotype: protein_coding
description:
  Cytosine permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: DSJ_13415
symbol: DSJ_13415
gene_biotype: protein_coding
description:
  CbbBc protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13435
symbol: DSJ_13435
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13450
symbol: DSJ_13450
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13455
symbol: DSJ_13455
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13460
symbol: DSJ_13460
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13475
symbol: araB
gene_biotype: protein_coding
description:
  Ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13480
symbol: araF
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; With AraGH is involved in the transport of arabinose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13485
symbol: araG
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.


ensembl_gene_id: DSJ_13490
symbol: araH
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter permease AraH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DSJ_13495
symbol: araC
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator AraC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13505
symbol: DSJ_13505
gene_biotype: protein_coding
description:
  Oxidoreductase; Internal stop; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13525
symbol: add
gene_biotype: protein_coding
description:
  Oxidoreductase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: DSJ_13535
symbol: manA
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: DSJ_13540
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: DSJ_13545
symbol: tus
gene_biotype: protein_coding
description:
  DNA replication terminus site-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13550
symbol: DSJ_13550
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13555
symbol: ybbM
gene_biotype: protein_coding
description:
  Iron export ABC transporter permease subunit FetB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13560
symbol: DSJ_13560
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein FetA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13595
symbol: DSJ_13595
gene_biotype: protein_coding
description:
  Modification methylase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13600
symbol: DSJ_13600
gene_biotype: protein_coding
description:
  Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13605
symbol: DSJ_13605
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: DSJ_13620
symbol: DSJ_13620
gene_biotype: protein_coding
description:
  Barstar, RNAse (barnase) inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13645
symbol: DSJ_13645
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13670
symbol: DSJ_13670
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13680
symbol: DSJ_13680
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13685
symbol: DSJ_13685
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13690
symbol: DSJ_13690
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13700
symbol: DSJ_13700
gene_biotype: protein_coding
description:
  L-sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13710
symbol: DSJ_13710
gene_biotype: protein_coding
description:
  Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.


ensembl_gene_id: DSJ_13715
symbol: yncB
gene_biotype: protein_coding
description:
  NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13725
symbol: DSJ_13725
gene_biotype: protein_coding
description:
  D-amino-acid oxidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13730
symbol: DSJ_13730
gene_biotype: protein_coding
description:
  Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13775
symbol: DSJ_13775
gene_biotype: protein_coding
description:
  LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13785
symbol: lamB
gene_biotype: protein_coding
description:
  Maltoporin; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.


ensembl_gene_id: DSJ_13790
symbol: malM
gene_biotype: protein_coding
description:
  Maltose regulon protein MalM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13795
symbol: malQ
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13800
symbol: DSJ_13800
gene_biotype: protein_coding
description:
  Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: DSJ_13810
symbol: DSJ_13810
gene_biotype: protein_coding
description:
  Transcriptional regulator MalT; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13830
symbol: DSJ_13830
gene_biotype: protein_coding
description:
  CbbBc protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13875
symbol: DSJ_13875
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13880
symbol: DSJ_13880
gene_biotype: protein_coding
description:
  Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13895
symbol: DSJ_13895
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13905
symbol: DSJ_13905
gene_biotype: protein_coding
description:
  Fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13910
symbol: DSJ_13910
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: DSJ_13925
symbol: kup
gene_biotype: protein_coding
description:
  Potassium transporter Kup; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: DSJ_13955
symbol: DSJ_13955
gene_biotype: protein_coding
description:
  Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13960
symbol: DSJ_13960
gene_biotype: protein_coding
description:
  Toxin HipA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13980
symbol: DSJ_13980
gene_biotype: protein_coding
description:
  Beta-glucosidase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13985
symbol: esaI
gene_biotype: protein_coding
description:
  Acyl-homoserine-lactone synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_13990
symbol: esaR
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14000
symbol: DSJ_14000
gene_biotype: protein_coding
description:
  Class C beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14010
symbol: DSJ_14010
gene_biotype: protein_coding
description:
  Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14015
symbol: dcp
gene_biotype: protein_coding
description:
  Dipeptidyl carboxypeptidase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14020
symbol: DSJ_14020
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase accessory protein XdhC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14025
symbol: DSJ_14025
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase molybdopterin binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14030
symbol: DSJ_14030
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14035
symbol: guaD
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: DSJ_14040
symbol: ydfG
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: DSJ_14050
symbol: ynfB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0482 family.


ensembl_gene_id: DSJ_14065
symbol: DSJ_14065
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14070
symbol: DSJ_14070
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14075
symbol: DSJ_14075
gene_biotype: protein_coding
description:
  Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14080
symbol: DSJ_14080
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14090
symbol: dgsA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Mlc, controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems, regulates genes involved in the uptake of sugars; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14110
symbol: DSJ_14110
gene_biotype: protein_coding
description:
  B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14115
symbol: ydeA
gene_biotype: protein_coding
description:
  Sugar transporter; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.


ensembl_gene_id: DSJ_14145
symbol: DSJ_14145
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: DSJ_14155
symbol: ydcJ
gene_biotype: protein_coding
description:
  DUF1338 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14160
symbol: DSJ_14160
gene_biotype: protein_coding
description:
  4-hydroxybenzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14170
symbol: smrA
gene_biotype: protein_coding
description:
  DNA endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14175
symbol: fnr
gene_biotype: protein_coding
description:
  Transcriptional regulator FNR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14180
symbol: DSJ_14180
gene_biotype: protein_coding
description:
  Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14185
symbol: pntB
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: DSJ_14190
symbol: pntA
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: DSJ_14200
symbol: ydgI
gene_biotype: protein_coding
description:
  Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14210
symbol: rstA
gene_biotype: protein_coding
description:
  Two-component system response regulator RstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14215
symbol: rstB
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14220
symbol: DSJ_14220
gene_biotype: protein_coding
description:
  Carboxypeptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: DSJ_14230
symbol: ydgD
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1B family.


ensembl_gene_id: DSJ_14235
symbol: hrpA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14240
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: DSJ_14245
symbol: DSJ_14245
gene_biotype: protein_coding
description:
  Amine metabolic protein ydbL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14250
symbol: ynbE
gene_biotype: protein_coding
description:
  YnbE family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14260
symbol: ldhA
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase; Fermentative; catalyzes the formationof pyruvate from lactate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: DSJ_14275
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine(32) synthetase TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: DSJ_14305
symbol: mppA
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14310
symbol: mpaA
gene_biotype: protein_coding
description:
  Murein peptide amidase A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14315
symbol: ycjG
gene_biotype: protein_coding
description:
  L-Ala-D/L-Glu epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14320
symbol: tpx
gene_biotype: protein_coding
description:
  Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: DSJ_14325
symbol: tyrR
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator TyrR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14330
symbol: ycjF
gene_biotype: protein_coding
description:
  TIGR01620 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14340
symbol: DSJ_14340
gene_biotype: protein_coding
description:
  Phage shock protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14345
symbol: DSJ_14345
gene_biotype: protein_coding
description:
  DNA-binding transcriptional activator PspC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14350
symbol: DSJ_14350
gene_biotype: protein_coding
description:
  Phage shock protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14355
symbol: DSJ_14355
gene_biotype: protein_coding
description:
  Phage shock protein PspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14360
symbol: DSJ_14360
gene_biotype: protein_coding
description:
  Phage shock protein operon transcriptional activator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14370
symbol: sapA
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14375
symbol: sapB
gene_biotype: protein_coding
description:
  Antimicrobial peptide ABC transporter permease SapB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14380
symbol: sapC
gene_biotype: protein_coding
description:
  Antimicrobial peptide ABC transporter permease SapC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14385
symbol: sapD
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DSJ_14395
symbol: fabI
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14405
symbol: DSJ_14405
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14410
symbol: DSJ_14410
gene_biotype: protein_coding
description:
  PTS maltose transporter subunit IICB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14415
symbol: DSJ_14415
gene_biotype: protein_coding
description:
  CbbBc protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DSJ_14420
symbol: rnb
gene_biotype: protein_coding
description:
  Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.


ensembl_gene_id: DSJ_14425
symbol: DSJ_14425
gene_biotype: protein_coding
description:
  Carbon starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14435
symbol: gmr
gene_biotype: protein_coding
description:
  Cyclic di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14440
symbol: DSJ_14440
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14460
symbol: yciH
gene_biotype: protein_coding
description:
  Translation initiation factor; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14465
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: DSJ_14470
symbol: yciM
gene_biotype: protein_coding
description:
  Lipopolysaccharide assembly protein LapB; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: DSJ_14475
symbol: yciS
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.


ensembl_gene_id: DSJ_14485
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.


ensembl_gene_id: DSJ_14500
symbol: cysB
gene_biotype: protein_coding
description:
  Transcriptional regulator CysB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DSJ_14505
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: DSJ_14515
symbol: sohB
gene_biotype: protein_coding
description:
  Protease SohB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14520
symbol: yciK
gene_biotype: protein_coding
description:
  YciK family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14525
symbol: btuR
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: DSJ_14530
symbol: DSJ_14530
gene_biotype: protein_coding
description:
  Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14545
symbol: rluB
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: DSJ_14555
symbol: yciO
gene_biotype: protein_coding
description:
  threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: DSJ_14560
symbol: yciV
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14565
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14570
symbol: DSJ_14570
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14575
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: DSJ_14580
symbol: trpF
gene_biotype: protein_coding
description:
  Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: DSJ_14585
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: DSJ_14590
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: DSJ_14600
symbol: ompW
gene_biotype: protein_coding
description:
  Outer membrane protein OmpW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14605
symbol: DSJ_14605
gene_biotype: protein_coding
description:
  Zinc/iron-chelating domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14615
symbol: yciB
gene_biotype: protein_coding
description:
  Septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: DSJ_14620
symbol: yciA
gene_biotype: protein_coding
description:
  acyl-CoA esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14625
symbol: DSJ_14625
gene_biotype: protein_coding
description:
  TonB system transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: DSJ_14640
symbol: clsA
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: DSJ_14645
symbol: yciU
gene_biotype: protein_coding
description:
  Highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0263 family.


ensembl_gene_id: DSJ_14650
symbol: oppF
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein OppF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DSJ_14655
symbol: oppD
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein OppD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DSJ_14660
symbol: oppC
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14665
symbol: oppB
gene_biotype: protein_coding
description:
  Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14670
symbol: DSJ_14670
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter substrate-binding protein OppA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14700
symbol: adhE
gene_biotype: protein_coding
description:
  Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: DSJ_14705
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14710
symbol: hns
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the histone-like protein H-NS family.


ensembl_gene_id: DSJ_14715
symbol: DSJ_14715
gene_biotype: protein_coding
description:
  Protein CapI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14720
symbol: DSJ_14720
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14725
symbol: galU
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14730
symbol: rssB
gene_biotype: protein_coding
description:
  Two-component system response regulator RssB; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation.


ensembl_gene_id: DSJ_14735
symbol: rssA
gene_biotype: protein_coding
description:
  Patatin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14740
symbol: DSJ_14740
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.


ensembl_gene_id: DSJ_14745
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: DSJ_14760
symbol: xthA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14770
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: DSJ_14775
symbol: ydjA
gene_biotype: protein_coding
description:
  NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14780
symbol: sppA
gene_biotype: protein_coding
description:
  SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14785
symbol: ansA
gene_biotype: protein_coding
description:
  L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14790
symbol: pncA
gene_biotype: protein_coding
description:
  Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14800
symbol: msrB
gene_biotype: protein_coding
description:
  Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: DSJ_14805
symbol: gapA
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: DSJ_14810
symbol: yeaD
gene_biotype: protein_coding
description:
  D-hexose-6-phosphate mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: DSJ_14820
symbol: DSJ_14820
gene_biotype: protein_coding
description:
  MltA-interacting protein MipA; Scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14825
symbol: yeaG
gene_biotype: protein_coding
description:
  PrkA family serine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14830
symbol: yeaH
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.


ensembl_gene_id: DSJ_14835
symbol: nhaP2
gene_biotype: protein_coding
description:
  K+/H+ antiporter; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. NhaP2 subfamily.


ensembl_gene_id: DSJ_14855
symbol: wceG2
gene_biotype: protein_coding
description:
  UDP-phosphate galactose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14865
symbol: dadX
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: DSJ_14875
symbol: ycgB
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14885
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: DSJ_14890
symbol: ycgN
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: DSJ_14895
symbol: ycgM
gene_biotype: protein_coding
description:
  Isomerase/hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14905
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: DSJ_14910
symbol: minD
gene_biotype: protein_coding
description:
  Septum site-determining protein MinD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14915
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: DSJ_14920
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: DSJ_14925
symbol: fadD
gene_biotype: protein_coding
description:
  long-chain-fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14935
symbol: yeaZ
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14940
symbol: yoaA
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14950
symbol: yoaH
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0181 family.


ensembl_gene_id: DSJ_14955
symbol: pabB
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase, component I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14960
symbol: DSJ_14960
gene_biotype: protein_coding
description:
  CoA pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. PCD1 subfamily.


ensembl_gene_id: DSJ_14965
symbol: DSJ_14965
gene_biotype: protein_coding
description:
  L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: DSJ_14980
symbol: manX
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14985
symbol: manY
gene_biotype: protein_coding
description:
  PTS mannose/fructose/sorbose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_14990
symbol: manZ
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15000
symbol: DSJ_15000
gene_biotype: protein_coding
description:
  23S rRNA (guanine(745)-N(1))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15025
symbol: kdgR
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator KdgR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15035
symbol: DSJ_15035
gene_biotype: protein_coding
description:
  MFS transporter; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15055
symbol: DSJ_15055
gene_biotype: protein_coding
description:
  MFS transporter; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15075
symbol: htpX
gene_biotype: protein_coding
description:
  Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: DSJ_15080
symbol: prc
gene_biotype: protein_coding
description:
  C-terminal processing peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: DSJ_15085
symbol: proQ
gene_biotype: protein_coding
description:
  RNA chaperone ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.


ensembl_gene_id: DSJ_15090
symbol: yebR
gene_biotype: protein_coding
description:
  Free methionine-R-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15105
symbol: rsmF
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.


ensembl_gene_id: DSJ_15130
symbol: betB
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: DSJ_15135
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: DSJ_15165
symbol: DSJ_15165
gene_biotype: protein_coding
description:
  MEKHLA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15175
symbol: DSJ_15175
gene_biotype: protein_coding
description:
  Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15185
symbol: holE
gene_biotype: protein_coding
description:
  DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15190
symbol: exoX
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease X; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15200
symbol: DSJ_15200
gene_biotype: protein_coding
description:
  PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; frameshifted; internal stop; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15225
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: DSJ_15230
symbol: eda
gene_biotype: protein_coding
description:
  Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15235
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: DSJ_15250
symbol: lpxM
gene_biotype: protein_coding
description:
  Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.


ensembl_gene_id: DSJ_15255
symbol: yebA
gene_biotype: protein_coding
description:
  Murein DD-endopeptidase MepM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15260
symbol: znuA
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15265
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: DSJ_15270
symbol: znuB
gene_biotype: protein_coding
description:
  Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15275
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: DSJ_15280
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: DSJ_15285
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: DSJ_15300
symbol: nudB
gene_biotype: protein_coding
description:
  Dihydroneopterin triphosphate diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15305
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: DSJ_15320
symbol: cmoA
gene_biotype: protein_coding
description:
  carboxy-S-adenosyl-L-methionine synthase CmoA; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: DSJ_15325
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: DSJ_15330
symbol: DSJ_15330
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15335
symbol: DSJ_15335
gene_biotype: protein_coding
description:
  Glycerol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15345
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: DSJ_15350
symbol: DSJ_15350
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15355
symbol: yecM
gene_biotype: protein_coding
description:
  Metalloprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15360
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15365
symbol: aqpZ
gene_biotype: protein_coding
description:
  Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: DSJ_15370
symbol: DSJ_15370
gene_biotype: protein_coding
description:
  Flagellar protein FlhE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15375
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: DSJ_15380
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: DSJ_15390
symbol: cheY
gene_biotype: protein_coding
description:
  Two-component system response regulator; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15395
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: DSJ_15400
symbol: cheR
gene_biotype: protein_coding
description:
  Chemotaxis protein-glutamate O-methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: DSJ_15415
symbol: cheW
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15420
symbol: cheA
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15425
symbol: DSJ_15425
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15430
symbol: motA
gene_biotype: protein_coding
description:
  Flagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15435
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: DSJ_15440
symbol: flhD
gene_biotype: protein_coding
description:
  Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: DSJ_15445
symbol: otsA
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalose-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.


ensembl_gene_id: DSJ_15460
symbol: basR
gene_biotype: protein_coding
description:
  Two-component system response regulator BasR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15465
symbol: basS
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15470
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: DSJ_15485
symbol: DSJ_15485
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15490
symbol: ssuD
gene_biotype: protein_coding
description:
  Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.


ensembl_gene_id: DSJ_15500
symbol: DSJ_15500
gene_biotype: protein_coding
description:
  5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15515
symbol: DSJ_15515
gene_biotype: protein_coding
description:
  Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15520
symbol: efeB
gene_biotype: protein_coding
description:
  Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.


ensembl_gene_id: DSJ_15525
symbol: efeO
gene_biotype: protein_coding
description:
  Iron uptake system protein EfeO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15530
symbol: DSJ_15530
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15535
symbol: putP
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: DSJ_15540
symbol: putA
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: DSJ_15550
symbol: DSJ_15550
gene_biotype: protein_coding
description:
  Acyltransferase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15580
symbol: DSJ_15580
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15590
symbol: DSJ_15590
gene_biotype: protein_coding
description:
  Metal chaperone, involved in Zn homeostasis, GTPase of family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15600
symbol: DSJ_15600
gene_biotype: protein_coding
description:
  Glycosyl transferase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15685
symbol: DSJ_15685
gene_biotype: protein_coding
description:
  Sulfate transporter; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15690
symbol: DSJ_15690
gene_biotype: protein_coding
description:
  Host nuclease inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15705
symbol: DSJ_15705
gene_biotype: protein_coding
description:
  Nlp family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15730
symbol: DSJ_15730
gene_biotype: protein_coding
description:
  tRNA-Asn; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15760
symbol: DSJ_15760
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: DSJ_15765
symbol: lacI
gene_biotype: protein_coding
description:
  Transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15770
symbol: yeeX
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0265 family.


ensembl_gene_id: DSJ_15780
symbol: dacD
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: DSJ_15800
symbol: ygbN
gene_biotype: protein_coding
description:
  GntP family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15805
symbol: ygbM
gene_biotype: protein_coding
description:
  Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.


ensembl_gene_id: DSJ_15810
symbol: ygbL
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15830
symbol: yeeF
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15835
symbol: puuA
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: DSJ_15840
symbol: DSJ_15840
gene_biotype: protein_coding
description:
  Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15845
symbol: puuR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates genes involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15850
symbol: puuB
gene_biotype: protein_coding
description:
  Gamma-glutamylputrescine oxidoreductase; Catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15860
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: DSJ_15865
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: DSJ_15870
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: DSJ_15875
symbol: hisB
gene_biotype: protein_coding
description:
  Bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: DSJ_15880
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: DSJ_15885
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15890
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: DSJ_15895
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: DSJ_15910
symbol: DSJ_15910
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15935
symbol: gnd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: DSJ_15940
symbol: DSJ_15940
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase GalE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: DSJ_15970
symbol: DSJ_15970
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: DSJ_15975
symbol: DSJ_15975
gene_biotype: protein_coding
description:
  Formyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15980
symbol: DSJ_15980
gene_biotype: protein_coding
description:
  dTDP-6-deoxy-3,4-keto-hexulose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_15990
symbol: rfbB
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: DSJ_16015
symbol: galE
gene_biotype: protein_coding
description:
  UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: DSJ_16020
symbol: galF
gene_biotype: protein_coding
description:
  GalU regulator GalF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16030
symbol: wceK
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis glycosyltransferase WcaL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16035
symbol: wceJ
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis pyruvyl transferase WcaK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16040
symbol: wceF
gene_biotype: protein_coding
description:
  Amylovoran biosynthesis protein AmsF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16045
symbol: wceN
gene_biotype: protein_coding
description:
  Amylovoran biosynthesis protein AmsD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16055
symbol: wceB
gene_biotype: protein_coding
description:
  Amylovoran biosynthesis protein AmsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16060
symbol: wceL
gene_biotype: protein_coding
description:
  Amylovoran biosynthesis protein AmsC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16065
symbol: wzc
gene_biotype: protein_coding
description:
  Tyrosine-protein kinase; Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16070
symbol: wzb
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: DSJ_16075
symbol: wza
gene_biotype: protein_coding
description:
  Polysaccharide export protein Wza; Required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16095
symbol: DSJ_16095
gene_biotype: protein_coding
description:
  Outer membrane assembly protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16105
symbol: udk
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16125
symbol: mdtA
gene_biotype: protein_coding
description:
  Molecular chaperone; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: DSJ_16130
symbol: mdtB
gene_biotype: protein_coding
description:
  Multidrug transporter subunit MdtB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.


ensembl_gene_id: DSJ_16135
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug transporter subunit MdtC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.


ensembl_gene_id: DSJ_16140
symbol: mdtD
gene_biotype: protein_coding
description:
  Multidrug transporter subunit MdtD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16145
symbol: baeS
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase BaeA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16150
symbol: baeR
gene_biotype: protein_coding
description:
  Two-component system response regulator BaeR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16160
symbol: yegS
gene_biotype: protein_coding
description:
  Lipid kinase YegS; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.


ensembl_gene_id: DSJ_16165
symbol: DSJ_16165
gene_biotype: protein_coding
description:
  Fructuronate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: DSJ_16175
symbol: thiD
gene_biotype: protein_coding
description:
  Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16180
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: DSJ_16240
symbol: DSJ_16240
gene_biotype: protein_coding
description:
  Integrase; TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.


ensembl_gene_id: DSJ_16250
symbol: ahpF
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16255
symbol: ahpC
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: DSJ_16265
symbol: mrp
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: DSJ_16270
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: DSJ_16285
symbol: yohK
gene_biotype: protein_coding
description:
  CidB/LrgB family autolysis modulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16290
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: DSJ_16295
symbol: maeA
gene_biotype: protein_coding
description:
  Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16300
symbol: sanA
gene_biotype: protein_coding
description:
  Vancomycin high temperature exclusion protein; Involved in vancomycin sensitivity and other barrier functions of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16305
symbol: mglC
gene_biotype: protein_coding
description:
  Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DSJ_16310
symbol: mglA
gene_biotype: protein_coding
description:
  Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16315
symbol: mglB
gene_biotype: protein_coding
description:
  Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16320
symbol: galS
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator GalS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16330
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16345
symbol: frmA
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: DSJ_16355
symbol: DSJ_16355
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16360
symbol: DSJ_16360
gene_biotype: protein_coding
description:
  Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: DSJ_16375
symbol: lysP
gene_biotype: protein_coding
description:
  Lysine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16390
symbol: yeiH
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0324 family.


ensembl_gene_id: DSJ_16400
symbol: nfo
gene_biotype: protein_coding
description:
  Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: DSJ_16405
symbol: fruA
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16410
symbol: fruK
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: DSJ_16415
symbol: fruB
gene_biotype: protein_coding
description:
  Bifunctional PTS fructose transporter subunit IIA/HPr protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16420
symbol: yeiP
gene_biotype: protein_coding
description:
  Elongation factor P-like protein YeiP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family.


ensembl_gene_id: DSJ_16430
symbol: lpxT
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.


ensembl_gene_id: DSJ_16435
symbol: DSJ_16435
gene_biotype: protein_coding
description:
  Bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16445
symbol: yejA
gene_biotype: protein_coding
description:
  c-di-GMP phosphodiesterase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16450
symbol: yejB
gene_biotype: protein_coding
description:
  Microcin C ABC transporter permease YejB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16455
symbol: yejE
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; Part of the microcin C transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16460
symbol: yejF
gene_biotype: protein_coding
description:
  Microcin C ABC transporter ATP-binding protein YejF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DSJ_16475
symbol: rsuA
gene_biotype: protein_coding
description:
  16S rRNA pseudouridine(516) synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: DSJ_16485
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: DSJ_16490
symbol: yejK
gene_biotype: protein_coding
description:
  Nucleoid-associated protein YejK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16495
symbol: yejL
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family.


ensembl_gene_id: DSJ_16530
symbol: DSJ_16530
gene_biotype: protein_coding
description:
  Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16540
symbol: DSJ_16540
gene_biotype: protein_coding
description:
  Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16545
symbol: DSJ_16545
gene_biotype: protein_coding
description:
  Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16595
symbol: DSJ_16595
gene_biotype: protein_coding
description:
  Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16600
symbol: DSJ_16600
gene_biotype: protein_coding
description:
  Prohead protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16605
symbol: DSJ_16605
gene_biotype: protein_coding
description:
  Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16650
symbol: DSJ_16650
gene_biotype: protein_coding
description:
  Rz lytic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16655
symbol: DSJ_16655
gene_biotype: protein_coding
description:
  Structural protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16660
symbol: DSJ_16660
gene_biotype: protein_coding
description:
  Phage holin, lambda family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16680
symbol: DSJ_16680
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16730
symbol: DSJ_16730
gene_biotype: protein_coding
description:
  Cruciferin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16815
symbol: DSJ_16815
gene_biotype: protein_coding
description:
  Helicase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16845
symbol: DSJ_16845
gene_biotype: protein_coding
description:
  alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16855
symbol: DSJ_16855
gene_biotype: protein_coding
description:
  Symporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16875
symbol: alkB
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease/ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16880
symbol: DSJ_16880
gene_biotype: protein_coding
description:
  FAD:protein FMN transferase ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: DSJ_16885
symbol: DSJ_16885
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16890
symbol: ompC
gene_biotype: protein_coding
description:
  Porin OmpC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Gram-negative porin family.


ensembl_gene_id: DSJ_16915
symbol: DSJ_16915
gene_biotype: protein_coding
description:
  Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16925
symbol: DSJ_16925
gene_biotype: protein_coding
description:
  ATP-binding protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16940
symbol: rcsD
gene_biotype: protein_coding
description:
  Large repetitive protein YeeJ; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.


ensembl_gene_id: DSJ_16945
symbol: rcsB
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.


ensembl_gene_id: DSJ_16950
symbol: rcsC
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase/response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.


ensembl_gene_id: DSJ_16955
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: DSJ_16960
symbol: ubiG
gene_biotype: protein_coding
description:
  Bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: DSJ_16965
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: DSJ_16970
symbol: nrdB
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16975
symbol: yfaE
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_16990
symbol: yfaY
gene_biotype: protein_coding
description:
  Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: DSJ_16995
symbol: elaB
gene_biotype: protein_coding
description:
  Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17000
symbol: mdoD
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein D; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: DSJ_17015
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: DSJ_17020
symbol: nuoM
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17025
symbol: nuoL
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17030
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: DSJ_17035
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DSJ_17040
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DSJ_17045
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: DSJ_17050
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: DSJ_17055
symbol: nuoF
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: DSJ_17060
symbol: nuoE
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17065
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: DSJ_17070
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DSJ_17075
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: DSJ_17080
symbol: DSJ_17080
gene_biotype: protein_coding
description:
  Transcriptional regulator LrhA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DSJ_17085
symbol: DSJ_17085
gene_biotype: protein_coding
description:
  Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17090
symbol: yfbR
gene_biotype: protein_coding
description:
  5'-deoxynucleotidase; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.


ensembl_gene_id: DSJ_17095
symbol: yfbT
gene_biotype: protein_coding
description:
  Sugar phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17100
symbol: yfbU
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0304 family.


ensembl_gene_id: DSJ_17110
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: DSJ_17115
symbol: pta
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: DSJ_17120
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: DSJ_17125
symbol: DSJ_17125
gene_biotype: protein_coding
description:
  Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17140
symbol: DSJ_17140
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17145
symbol: DSJ_17145
gene_biotype: protein_coding
description:
  Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17155
symbol: yfcF
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Catalyzes the formation of 2,4-dinitrophenyl-S-glutathione from 1-chloro-2,4-dinitrobenzene and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17160
symbol: yfcH
gene_biotype: protein_coding
description:
  TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17165
symbol: DSJ_17165
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17170
symbol: xylB-2
gene_biotype: protein_coding
description:
  Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17180
symbol: DSJ_17180
gene_biotype: protein_coding
description:
  D-arabinitol 4-dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17185
symbol: hisP
gene_biotype: protein_coding
description:
  Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17190
symbol: hisM
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17195
symbol: hisQ
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With HisJMP is involved in the transport of histidine/lysine/arginine/ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17200
symbol: DSJ_17200
gene_biotype: protein_coding
description:
  Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: DSJ_17205
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: DSJ_17210
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: DSJ_17215
symbol: cvpA
gene_biotype: protein_coding
description:
  Membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17220
symbol: dedD
gene_biotype: protein_coding
description:
  Cell division protein DedD; Non-essential cell division protein that could be required for efficient cell constriction.


ensembl_gene_id: DSJ_17225
symbol: folC
gene_biotype: protein_coding
description:
  Bifunctional tetrahydrofolate synthase/dihydrofolate synthase; Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydropteroate (7,8-dihydropteroate or H2Pte) to form dihydrofolate (7,8-dihydrofolate monoglutamate or H2Pte-Glu). Also catalyzes successive additions of L-glutamate to tetrahydrofolate or 10- formyltetrahydrofolate or 5,10-methylenetetrahydrofolate, leading to folylpolyglutamate derivatives.


ensembl_gene_id: DSJ_17230
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: DSJ_17240
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: DSJ_17245
symbol: usg
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: DSJ_17250
symbol: pdxB
gene_biotype: protein_coding
description:
  4-phosphoerythronate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: DSJ_17255
symbol: DSJ_17255
gene_biotype: protein_coding
description:
  Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17265
symbol: DSJ_17265
gene_biotype: protein_coding
description:
  Histidine kinase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17275
symbol: DSJ_17275
gene_biotype: protein_coding
description:
  Tricarboxylic transporter; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17280
symbol: DSJ_17280
gene_biotype: protein_coding
description:
  Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17285
symbol: DSJ_17285
gene_biotype: protein_coding
description:
  Flagella biosynthesis regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17290
symbol: DSJ_17290
gene_biotype: protein_coding
description:
  Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17300
symbol: fabB
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: DSJ_17305
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: DSJ_17315
symbol: yfcM
gene_biotype: protein_coding
description:
  Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17325
symbol: mepA
gene_biotype: protein_coding
description:
  Penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus.


ensembl_gene_id: DSJ_17330
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: DSJ_17335
symbol: prmB
gene_biotype: protein_coding
description:
  Ribosomal protein L3 N(5)-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: DSJ_17340
symbol: smrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0115 family.


ensembl_gene_id: DSJ_17350
symbol: sixA
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase SixA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17355
symbol: fadJ
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: DSJ_17365
symbol: yfcZ
gene_biotype: protein_coding
description:
  3-ketoacyl-CoA thiolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17370
symbol: fadL
gene_biotype: protein_coding
description:
  Long-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17375
symbol: vacJ
gene_biotype: protein_coding
description:
  Phospholipid-binding lipoprotein MlaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17380
symbol: DSJ_17380
gene_biotype: protein_coding
description:
  C-type cytochrome biogenesis protein CcmI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17390
symbol: ccmG
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Cytochrome c-type biogenesis thioredoxin; involved in the reduction of disulfide bonds to allow heme bonding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17395
symbol: ccmF
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17400
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: DSJ_17405
symbol: ccmD
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: DSJ_17410
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: DSJ_17415
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: DSJ_17420
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: DSJ_17465
symbol: DSJ_17465
gene_biotype: protein_coding
description:
  IS630 family transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17470
symbol: DSJ_17470
gene_biotype: protein_coding
description:
  Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17530
symbol: DSJ_17530
gene_biotype: protein_coding
description:
  Addiction module antitoxin RelB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17535
symbol: DSJ_17535
gene_biotype: protein_coding
description:
  Addiction module antidote protein, HigA family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17620
symbol: DSJ_17620
gene_biotype: protein_coding
description:
  Terminase small subunit; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17645
symbol: DSJ_17645
gene_biotype: protein_coding
description:
  DUF2778 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17800
symbol: DSJ_17800
gene_biotype: protein_coding
description:
  TerL protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17855
symbol: DSJ_17855
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17890
symbol: DSJ_17890
gene_biotype: protein_coding
description:
  Nucleoside 2-deoxyribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17895
symbol: DSJ_17895
gene_biotype: protein_coding
description:
  Helicase DnaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17900
symbol: DSJ_17900
gene_biotype: protein_coding
description:
  DNA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_17915
symbol: DSJ_17915
gene_biotype: protein_coding
description:
  Repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: DSJ_17950
symbol: DSJ_17950
gene_biotype: protein_coding
description:
  DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18025
symbol: DSJ_18025
gene_biotype: protein_coding
description:
  Phage portal protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18070
symbol: DSJ_18070
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DSJ_18145
symbol: DSJ_18145
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18150
symbol: DSJ_18150
gene_biotype: protein_coding
description:
  Alanine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18160
symbol: ypdA
gene_biotype: protein_coding
description:
  ECF transporter S component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18170
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.


ensembl_gene_id: DSJ_18180
symbol: yghZ
gene_biotype: protein_coding
description:
  Indolepyruvate decarboxylase; Thiamindiphosphate-dependent; catalyzes the formation of indoleacetaldehyde from indolepyruvate; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18195
symbol: mntH
gene_biotype: protein_coding
description:
  Methyltransferase; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: DSJ_18200
symbol: nupC
gene_biotype: protein_coding
description:
  Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: DSJ_18260
symbol: DSJ_18260
gene_biotype: protein_coding
description:
  Formate/nitrite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18270
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: DSJ_18320
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: DSJ_18325
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: DSJ_18330
symbol: cysZ
gene_biotype: protein_coding
description:
  Sulfate transporter CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.


ensembl_gene_id: DSJ_18335
symbol: cysK
gene_biotype: protein_coding
description:
  Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: DSJ_18340
symbol: ptsH
gene_biotype: protein_coding
description:
  PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18345
symbol: ptsI
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: DSJ_18350
symbol: crr
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18355
symbol: DSJ_18355
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18365
symbol: cysM
gene_biotype: protein_coding
description:
  Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: DSJ_18370
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: DSJ_18375
symbol: cysW
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease subunit CysW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18380
symbol: cysU
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: DSJ_18385
symbol: cysP
gene_biotype: protein_coding
description:
  Thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18390
symbol: DSJ_18390
gene_biotype: protein_coding
description:
  RpoE-regulated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18400
symbol: ypeA
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. YpeA subfamily.


ensembl_gene_id: DSJ_18410
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: DSJ_18420
symbol: talA
gene_biotype: protein_coding
description:
  NADP-dependent malic enzyme; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: DSJ_18445
symbol: DSJ_18445
gene_biotype: protein_coding
description:
  Malate permease; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18655
symbol: DSJ_18655
gene_biotype: protein_coding
description:
  AlpA family phage regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18670
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: DSJ_18675
symbol: ybcJ
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18680
symbol: DSJ_18680
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18685
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: DSJ_18690
symbol: ppiB
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: DSJ_18695
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine diphosphatase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: DSJ_18700
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: DSJ_18705
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: DSJ_18710
symbol: ybbP
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18725
symbol: tesA
gene_biotype: protein_coding
description:
  Multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18730
symbol: ybbO
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: DSJ_18735
symbol: ybbN
gene_biotype: protein_coding
description:
  Co-chaperone YbbN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18740
symbol: DSJ_18740
gene_biotype: protein_coding
description:
  Paraslipin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18750
symbol: cueR
gene_biotype: protein_coding
description:
  Cu(I)-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18785
symbol: DSJ_18785
gene_biotype: protein_coding
description:
  Adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18810
symbol: DSJ_18810
gene_biotype: protein_coding
description:
  Death-on-curing family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18825
symbol: DSJ_18825
gene_biotype: protein_coding
description:
  Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18830
symbol: DSJ_18830
gene_biotype: protein_coding
description:
  Phage major capsid protein, P2 family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18840
symbol: DSJ_18840
gene_biotype: protein_coding
description:
  Capsid assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18890
symbol: DSJ_18890
gene_biotype: protein_coding
description:
  Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18940
symbol: copA
gene_biotype: protein_coding
description:
  Cu+ exporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18945
symbol: ybaP
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18950
symbol: ybaK
gene_biotype: protein_coding
description:
  aminoacyl-tRNA deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: DSJ_18960
symbol: DSJ_18960
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18965
symbol: ushA
gene_biotype: protein_coding
description:
  Bifunctional UDP-sugar hydrolase/5'-nucleotidase; Catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: DSJ_18970
symbol: ybaL
gene_biotype: protein_coding
description:
  Kef family K(+) transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: DSJ_18975
symbol: gsk
gene_biotype: protein_coding
description:
  Catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_18980
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: DSJ_18990
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: DSJ_18995
symbol: ybaB
gene_biotype: protein_coding
description:
  YbaB/EbfC family nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: DSJ_19000
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: DSJ_19005
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: DSJ_19020
symbol: ybaM
gene_biotype: protein_coding
description:
  DUF2496 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19025
symbol: acrR
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor AcrR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19030
symbol: acrA
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; With AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: DSJ_19035
symbol: DSJ_19035
gene_biotype: protein_coding
description:
  Aminoglycoside/multidrug transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19040
symbol: ykgM
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19045
symbol: DSJ_19045
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: DSJ_19050
symbol: DSJ_19050
gene_biotype: protein_coding
description:
  Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19070
symbol: DSJ_19070
gene_biotype: protein_coding
description:
  Hha toxicity attenuator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19075
symbol: DSJ_19075
gene_biotype: protein_coding
description:
  With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19085
symbol: DSJ_19085
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19100
symbol: tesB
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19105
symbol: amtB
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19115
symbol: mdlB
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease/ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19130
symbol: DSJ_19130
gene_biotype: protein_coding
description:
  Transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19135
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: DSJ_19140
symbol: DSJ_19140
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19155
symbol: hupB
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: DSJ_19160
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: DSJ_19165
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: DSJ_19170
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: DSJ_19175
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: DSJ_19180
symbol: bolA
gene_biotype: protein_coding
description:
  Positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: DSJ_19190
symbol: ampG
gene_biotype: protein_coding
description:
  Muropeptide transporter AmpG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19195
symbol: cyoA
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19200
symbol: cyoB
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: DSJ_19205
symbol: cyoC
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19210
symbol: cyoD
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19215
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: DSJ_19225
symbol: yajQ
gene_biotype: protein_coding
description:
  YajQ family cyclic di-GMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: DSJ_19235
symbol: yajL
gene_biotype: protein_coding
description:
  DJ-1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19240
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA 4-thiouridine(8) synthase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: DSJ_19245
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: DSJ_19250
symbol: ispA
gene_biotype: protein_coding
description:
  (2E,6E)-farnesyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: DSJ_19255
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: DSJ_19285
symbol: pgpA
gene_biotype: protein_coding
description:
  Oxidoreductase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: DSJ_19290
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: DSJ_19295
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: DSJ_19300
symbol: ribE
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: DSJ_19305
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: DSJ_19310
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: DSJ_19320
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: DSJ_19325
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: DSJ_19330
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: DSJ_19335
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose t [...]


ensembl_gene_id: DSJ_19365
symbol: yafD
gene_biotype: protein_coding
description:
  EEP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19370
symbol: mltD
gene_biotype: protein_coding
description:
  Murein transglycosylase D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19375
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: DSJ_19390
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: DSJ_19400
symbol: DSJ_19400
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19410
symbol: DSJ_19410
gene_biotype: protein_coding
description:
  Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19415
symbol: DSJ_19415
gene_biotype: protein_coding
description:
  Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19425
symbol: DSJ_19425
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: DSJ_19430
symbol: DSJ_19430
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19435
symbol: DSJ_19435
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease/ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19455
symbol: DSJ_19455
gene_biotype: protein_coding
description:
  Fimbrial assembly protein FimA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19460
symbol: DSJ_19460
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase (ArgE); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19465
symbol: DSJ_19465
gene_biotype: protein_coding
description:
  arpA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19470
symbol: DSJ_19470
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DSJ_19475
symbol: DSJ_19475
gene_biotype: protein_coding
description:
  DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19480
symbol: DSJ_19480
gene_biotype: protein_coding
description:
  Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19485
symbol: DSJ_19485
gene_biotype: protein_coding
description:
  DUF4089 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19490
symbol: DSJ_19490
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19500
symbol: DSJ_19500
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: DSJ_19505
symbol: DSJ_19505
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19515
symbol: DSJ_19515
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19525
symbol: DSJ_19525
gene_biotype: protein_coding
description:
  Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19530
symbol: DSJ_19530
gene_biotype: protein_coding
description:
  OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19560
symbol: yafV
gene_biotype: protein_coding
description:
  Catalase/peroxidase HPI; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19565
symbol: ybdL
gene_biotype: protein_coding
description:
  Methionine aminotransferase; Catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19570
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: DSJ_19575
symbol: mtnC
gene_biotype: protein_coding
description:
  2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: DSJ_19580
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: DSJ_19585
symbol: mtnA
gene_biotype: protein_coding
description:
  S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: DSJ_19590
symbol: mtnK
gene_biotype: protein_coding
description:
  S-methyl-5-thioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: DSJ_19595
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19600
symbol: lpcA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: DSJ_19605
symbol: yafJ
gene_biotype: protein_coding
description:
  Class II glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19610
symbol: yafK
gene_biotype: protein_coding
description:
  Transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19615
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: DSJ_19635
symbol: DSJ_19635
gene_biotype: protein_coding
description:
  Serine/threonine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19645
symbol: DSJ_19645
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19660
symbol: pepD
gene_biotype: protein_coding
description:
  Cytosol nonspecific dipeptidase; Catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19665
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: DSJ_19670
symbol: frsA
gene_biotype: protein_coding
description:
  Fermentation/respiration switch protein; Forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0255 family.


ensembl_gene_id: DSJ_19675
symbol: crl
gene_biotype: protein_coding
description:
  Sigma factor-binding protein Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.


ensembl_gene_id: DSJ_19685
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: DSJ_19690
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: DSJ_19695
symbol: DSJ_19695
gene_biotype: protein_coding
description:
  Chromophore lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: DSJ_19710
symbol: DSJ_19710
gene_biotype: protein_coding
description:
  Lysozyme; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19730
symbol: DSJ_19730
gene_biotype: protein_coding
description:
  Aspartyl beta-hydroxylase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19740
symbol: gldA
gene_biotype: protein_coding
description:
  PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19745
symbol: dhaK
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase subunit DhaK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19750
symbol: dhaL
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19755
symbol: dhaM
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase subunit DhaM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: DSJ_19760
symbol: DSJ_19760
gene_biotype: protein_coding
description:
  Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19770
symbol: DSJ_19770
gene_biotype: protein_coding
description:
  Contact-dependent inhibition of growth factor CdiA; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19800
symbol: DSJ_19800
gene_biotype: protein_coding
description:
  IS630 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19820
symbol: DSJ_19820
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19830
symbol: DSJ_19830
gene_biotype: protein_coding
description:
  Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19840
symbol: dbpA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase DbpA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: DSJ_19855
symbol: DSJ_19855
gene_biotype: protein_coding
description:
  Cyanate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19860
symbol: DSJ_19860
gene_biotype: protein_coding
description:
  L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: DSJ_19865
symbol: lldR
gene_biotype: protein_coding
description:
  Transcriptional regulator LldR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19870
symbol: lldD
gene_biotype: protein_coding
description:
  Alpha-hydroxy-acid oxidizing enzyme; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.


ensembl_gene_id: DSJ_19875
symbol: osmC
gene_biotype: protein_coding
description:
  OsmC family peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19895
symbol: DSJ_19895
gene_biotype: protein_coding
description:
  PTS cellobiose transporter subunit IIC; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_19995
symbol: DSJ_19995
gene_biotype: protein_coding
description:
  Muraminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20125
symbol: DSJ_20125
gene_biotype: protein_coding
description:
  Modification methylase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20130
symbol: DSJ_20130
gene_biotype: protein_coding
description:
  PTS lactose/cellobiose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20205
symbol: DSJ_20205
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20220
symbol: DSJ_20220
gene_biotype: protein_coding
description:
  Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20250
symbol: DSJ_20250
gene_biotype: protein_coding
description:
  Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20280
symbol: DSJ_20280
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20290
symbol: DSJ_20290
gene_biotype: protein_coding
description:
  Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20300
symbol: DSJ_20300
gene_biotype: protein_coding
description:
  Protein CsuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20310
symbol: DSJ_20310
gene_biotype: protein_coding
description:
  Fimbrial assembly protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20315
symbol: DSJ_20315
gene_biotype: protein_coding
description:
  Citrate-proton symporter; Is involved in the uptake of citrate and the transport of protons into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20320
symbol: exbD
gene_biotype: protein_coding
description:
  TonB system transport protein ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20325
symbol: exbB
gene_biotype: protein_coding
description:
  tonB-system energizer ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20345
symbol: DSJ_20345
gene_biotype: protein_coding
description:
  4-hydroxyphenylpyruvate dioxygenase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20350
symbol: DSJ_20350
gene_biotype: protein_coding
description:
  Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20365
symbol: DSJ_20365
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20370
symbol: DSJ_20370
gene_biotype: protein_coding
description:
  3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20380
symbol: metC
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20395
symbol: dkgA
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20420
symbol: ftsP
gene_biotype: protein_coding
description:
  Flagellin; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress; Belongs to the FtsP family.


ensembl_gene_id: DSJ_20425
symbol: plsC
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Catalyzes the formation of 1,2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: DSJ_20430
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: DSJ_20455
symbol: DSJ_20455
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20460
symbol: DSJ_20460
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20475
symbol: DSJ_20475
gene_biotype: protein_coding
description:
  ArtI protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20485
symbol: DSJ_20485
gene_biotype: protein_coding
description:
  NADPH quinone reductase MdaB; Involved in drug resistance; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20490
symbol: DSJ_20490
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Catalyzes the oxidation of menadiol to menadione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20495
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: DSJ_20500
symbol: yqiA
gene_biotype: protein_coding
description:
  Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20505
symbol: cpdA-2
gene_biotype: protein_coding
description:
  3',5'-cyclic-AMP phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: DSJ_20515
symbol: nudF
gene_biotype: protein_coding
description:
  ADP-ribose diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20520
symbol: tolC
gene_biotype: protein_coding
description:
  Outer membrane channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20525
symbol: ygiB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0441 family.


ensembl_gene_id: DSJ_20535
symbol: ygiD
gene_biotype: protein_coding
description:
  4,5-DOPA dioxygenase extradiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20540
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: DSJ_20550
symbol: rfaE
gene_biotype: protein_coding
description:
  Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: DSJ_20555
symbol: glnE
gene_biotype: protein_coding
description:
  Bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...]


ensembl_gene_id: DSJ_20560
symbol: DSJ_20560
gene_biotype: protein_coding
description:
  Inorganic triphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20570
symbol: cca
gene_biotype: protein_coding
description:
  2',3'-cyclic phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: DSJ_20575
symbol: bacA
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: DSJ_20580
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: DSJ_20585
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate--glycerol-3-phosphate O-acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: DSJ_20590
symbol: ygjD
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: DSJ_20595
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: DSJ_20600
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: DSJ_20605
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: DSJ_20610
symbol: mug
gene_biotype: protein_coding
description:
  Double-stranded uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the uracil-DNA glycosylase (UDG) superfamily. TDG/mug family.


ensembl_gene_id: DSJ_20640
symbol: DSJ_20640
gene_biotype: protein_coding
description:
  MazF family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20675
symbol: DSJ_20675
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20700
symbol: DSJ_20700
gene_biotype: protein_coding
description:
  5'-nucleotidase, lipoprotein e(P4) family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20705
symbol: DSJ_20705
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: DSJ_20710
symbol: DSJ_20710
gene_biotype: protein_coding
description:
  SulP family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20720
symbol: ddlA
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: DSJ_20770
symbol: DSJ_20770
gene_biotype: protein_coding
description:
  Bifunctional diguanylate cyclase/phosphodiesterase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20790
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily.


ensembl_gene_id: DSJ_20795
symbol: deoA
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: DSJ_20800
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: DSJ_20805
symbol: deoD
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20820
symbol: DSJ_20820
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20840
symbol: DSJ_20840
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20850
symbol: DSJ_20850
gene_biotype: protein_coding
description:
  Protein-serine/threonine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20895
symbol: DSJ_20895
gene_biotype: protein_coding
description:
  DUF4432 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20935
symbol: DSJ_20935
gene_biotype: protein_coding
description:
  Sensor domain-containing diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20955
symbol: treF
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalase; Hydrolyzes trehalose to glucose. Could be involved, in cells returning to low osmolarity conditions, in the utilization of the accumulated cytoplasmic trehalose, which was synthesized in response to high osmolarity.


ensembl_gene_id: DSJ_20970
symbol: DSJ_20970
gene_biotype: protein_coding
description:
  Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20975
symbol: DSJ_20975
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_20995
symbol: DSJ_20995
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit I; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21000
symbol: DSJ_21000
gene_biotype: protein_coding
description:
  DUF2474 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21025
symbol: DSJ_21025
gene_biotype: protein_coding
description:
  Selenoprotein W-related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21035
symbol: DSJ_21035
gene_biotype: protein_coding
description:
  Competence protein ComA; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21040
symbol: DSJ_21040
gene_biotype: protein_coding
description:
  Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21065
symbol: DSJ_21065
gene_biotype: protein_coding
description:
  MrkB; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21080
symbol: DSJ_21080
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: DSJ_21095
symbol: deoR
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor DeoR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21105
symbol: DSJ_21105
gene_biotype: protein_coding
description:
  Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21130
symbol: rlmG
gene_biotype: protein_coding
description:
  23S rRNA (guanine(1835)-N(2))-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.


ensembl_gene_id: DSJ_21140
symbol: DSJ_21140
gene_biotype: protein_coding
description:
  Cl- channel voltage-gated family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21165
symbol: uxaB
gene_biotype: protein_coding
description:
  Altronate oxidoreductase; Catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21170
symbol: uxaC
gene_biotype: protein_coding
description:
  Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21180
symbol: exuR
gene_biotype: protein_coding
description:
  Transcriptional regulator ExuR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21190
symbol: mzrA
gene_biotype: protein_coding
description:
  Modulator protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.


ensembl_gene_id: DSJ_21235
symbol: yqjG
gene_biotype: protein_coding
description:
  Glutathione-dependent reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21245
symbol: DSJ_21245
gene_biotype: protein_coding
description:
  Threonine/serine transporter TdcC; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21265
symbol: DSJ_21265
gene_biotype: protein_coding
description:
  Threonine/serine transporter TdcC; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21280
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: DSJ_21285
symbol: yraM
gene_biotype: protein_coding
description:
  Penicillin-binding protein activator; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.


ensembl_gene_id: DSJ_21290
symbol: yraN
gene_biotype: protein_coding
description:
  YraN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: DSJ_21295
symbol: diaA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily.


ensembl_gene_id: DSJ_21300
symbol: yraP
gene_biotype: protein_coding
description:
  Osmotically-inducible protein OsmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21305
symbol: yhaK
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: DSJ_21330
symbol: DSJ_21330
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21355
symbol: DSJ_21355
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21375
symbol: yihQ
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: DSJ_21380
symbol: DSJ_21380
gene_biotype: protein_coding
description:
  Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21385
symbol: DSJ_21385
gene_biotype: protein_coding
description:
  Sugar isomerase; Catalyzes the isomerization of sulfoquinovose (SQ) to 6- deoxy-6-sulfo-D-fructose (SF).


ensembl_gene_id: DSJ_21390
symbol: yihT
gene_biotype: protein_coding
description:
  Aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.


ensembl_gene_id: DSJ_21395
symbol: yihU
gene_biotype: protein_coding
description:
  Gamma-hydroxybutyrate dehydrogenase; Reduces 3-sulfolactaldehyde (SLA) to 2,3-dihydroxypropane 1- sulfonate (DHPS); Belongs to the HIBADH-related family. 3-sulfolactaldehyde reductase subfamily.


ensembl_gene_id: DSJ_21400
symbol: yihV
gene_biotype: protein_coding
description:
  Ribokinase; Phosphorylates 6-deoxy-6-sulfo-D-fructose (SF) to 6-deoxy-6- sulfo-D-fructose 1-phosphate (SFP); Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: DSJ_21410
symbol: DSJ_21410
gene_biotype: protein_coding
description:
  Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21415
symbol: pmbA
gene_biotype: protein_coding
description:
  Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21420
symbol: yjgA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0307 family.


ensembl_gene_id: DSJ_21435
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: DSJ_21460
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: DSJ_21465
symbol: ytfP
gene_biotype: protein_coding
description:
  Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21470
symbol: ytfN
gene_biotype: protein_coding
description:
  Translocation and assembly module TamB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21495
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase CysQ; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: DSJ_21500
symbol: cpdB
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: DSJ_21505
symbol: fklB
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21510
symbol: DSJ_21510
gene_biotype: protein_coding
description:
  Cell envelope opacity-associated protein A YtfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21535
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: DSJ_21540
symbol: priB
gene_biotype: protein_coding
description:
  Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: DSJ_21550
symbol: DSJ_21550
gene_biotype: protein_coding
description:
  YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21560
symbol: DSJ_21560
gene_biotype: protein_coding
description:
  Bioflm peroxide resistance protein BsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21565
symbol: aidB
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21570
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.


ensembl_gene_id: DSJ_21575
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily.


ensembl_gene_id: DSJ_21580
symbol: nsrR
gene_biotype: protein_coding
description:
  Transcriptional repressor NsrR; Negatively regulates the transcription of genes upregulated by nitrosative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21585
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: DSJ_21590
symbol: DSJ_21590
gene_biotype: protein_coding
description:
  DUF2065 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21605
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: DSJ_21610
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: DSJ_21615
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: DSJ_21620
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: DSJ_21630
symbol: yjeE
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21635
symbol: yjeF
gene_biotype: protein_coding
description:
  Bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-spec [...]


ensembl_gene_id: DSJ_21640
symbol: yjeS
gene_biotype: protein_coding
description:
  tRNA epoxyqueuosine(34) reductase QueG; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: DSJ_21660
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: DSJ_21665
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: DSJ_21670
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: DSJ_21675
symbol: yjeP
gene_biotype: protein_coding
description:
  Miniconductance mechanosensitive channel MscM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21710
symbol: DSJ_21710
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.


ensembl_gene_id: DSJ_21715
symbol: aaeA
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: DSJ_21720
symbol: aaeX
gene_biotype: protein_coding
description:
  Transporter; Membrane protein AaeX; the gene is a member of the aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21725
symbol: aaeR
gene_biotype: protein_coding
description:
  Transcriptional regulator; For aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DSJ_21730
symbol: tldD
gene_biotype: protein_coding
description:
  Metalloprotease TldD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21735
symbol: DSJ_21735
gene_biotype: protein_coding
description:
  TIGR02099 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21740
symbol: rng
gene_biotype: protein_coding
description:
  Ribonuclease E/G; Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21745
symbol: yhdE
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: DSJ_21750
symbol: mreD
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.


ensembl_gene_id: DSJ_21760
symbol: mreB
gene_biotype: protein_coding
description:
  Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21765
symbol: DSJ_21765
gene_biotype: protein_coding
description:
  RNase E specificity factor CsrD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21770
symbol: yedY
gene_biotype: protein_coding
description:
  Mononuclear molybdenum enzyme YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce bot [...]


ensembl_gene_id: DSJ_21775
symbol: yedZ
gene_biotype: protein_coding
description:
  Sulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]


ensembl_gene_id: DSJ_21780
symbol: aroQ
gene_biotype: protein_coding
description:
  Type II 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: DSJ_21785
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: DSJ_21790
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: DSJ_21800
symbol: panF
gene_biotype: protein_coding
description:
  Sodium/panthothenate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: DSJ_21805
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: DSJ_21810
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: DSJ_21815
symbol: fis
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: DSJ_21850
symbol: hemG
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21855
symbol: trkH
gene_biotype: protein_coding
description:
  Potassium transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: DSJ_21860
symbol: yigZ
gene_biotype: protein_coding
description:
  YigZ family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21870
symbol: fadB
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.


ensembl_gene_id: DSJ_21875
symbol: fadA
gene_biotype: protein_coding
description:
  3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.


ensembl_gene_id: DSJ_21880
symbol: fre
gene_biotype: protein_coding
description:
  NAD(P)H-flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21885
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: DSJ_21890
symbol: rfaH
gene_biotype: protein_coding
description:
  Transcriptional activator RfaH; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains.


ensembl_gene_id: DSJ_21895
symbol: tatD
gene_biotype: protein_coding
description:
  Hydrolase TatD; 3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair. Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. TatD subfamily.


ensembl_gene_id: DSJ_21900
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: DSJ_21905
symbol: tatB
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: DSJ_21910
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: DSJ_21915
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis regulatory protein kinase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: DSJ_21925
symbol: ubiE
gene_biotype: protein_coding
description:
  Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: DSJ_21930
symbol: rmuC
gene_biotype: protein_coding
description:
  Recombinase RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21935
symbol: udp
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: DSJ_21940
symbol: ysgA
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_21960
symbol: metR
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Homocysteine-binding; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DSJ_21975
symbol: glpT
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22000
symbol: pldB
gene_biotype: protein_coding
description:
  Sugar/pyridoxal phosphate phosphatase YigL; Frameshifted; internal stop; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22005
symbol: rhtB
gene_biotype: protein_coding
description:
  Homoserine/homoserine lactone efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22010
symbol: rhtC
gene_biotype: protein_coding
description:
  Threonine export protein RhtC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22015
symbol: recQ
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22020
symbol: pldA
gene_biotype: protein_coding
description:
  Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: DSJ_22045
symbol: DSJ_22045
gene_biotype: protein_coding
description:
  Chloramphenical resistance permease RarD; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22060
symbol: corA
gene_biotype: protein_coding
description:
  AbrB family transcriptional regulator; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: DSJ_22065
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22070
symbol: yigB
gene_biotype: protein_coding
description:
  Flavin mononucleotide phosphatase; YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22075
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifically exchanges t [...]


ensembl_gene_id: DSJ_22080
symbol: yigA
gene_biotype: protein_coding
description:
  DUF484 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22085
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: DSJ_22095
symbol: cyaA
gene_biotype: protein_coding
description:
  Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the adenylyl cyclase class-1 family.


ensembl_gene_id: DSJ_22100
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: DSJ_22105
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: DSJ_22110
symbol: hemX
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22115
symbol: hemY
gene_biotype: protein_coding
description:
  Protoheme IX biogenesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22155
symbol: wecG
gene_biotype: protein_coding
description:
  Lipopolysaccharide N-acetylmannosaminouronosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.


ensembl_gene_id: DSJ_22160
symbol: wzyE
gene_biotype: protein_coding
description:
  Enterobacterial common antigen polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22165
symbol: wecF
gene_biotype: protein_coding
description:
  4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.


ensembl_gene_id: DSJ_22170
symbol: wzxE
gene_biotype: protein_coding
description:
  O-antigen translocase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.


ensembl_gene_id: DSJ_22175
symbol: rffA
gene_biotype: protein_coding
description:
  dTDP-4-amino-4,6-dideoxygalactose transaminase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: DSJ_22180
symbol: wecD
gene_biotype: protein_coding
description:
  TDP-D-fucosamine acetyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.


ensembl_gene_id: DSJ_22185
symbol: rffD
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.


ensembl_gene_id: DSJ_22190
symbol: rffE
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues.


ensembl_gene_id: DSJ_22195
symbol: wzzE
gene_biotype: protein_coding
description:
  Polysaccharide chain length modulation protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.


ensembl_gene_id: DSJ_22200
symbol: rfe
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55).


ensembl_gene_id: DSJ_22205
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: DSJ_22210
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: DSJ_22215
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: DSJ_22220
symbol: gpp
gene_biotype: protein_coding
description:
  Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.


ensembl_gene_id: DSJ_22225
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: DSJ_22230
symbol: ppiC
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22240
symbol: yhjH
gene_biotype: protein_coding
description:
  Cyclic-guanylate-specific phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22245
symbol: kdgK
gene_biotype: protein_coding
description:
  Ketodeoxygluconokinase; Catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22260
symbol: yhjJ
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22265
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter DctA; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: DSJ_22270
symbol: DSJ_22270
gene_biotype: protein_coding
description:
  Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22275
symbol: DSJ_22275
gene_biotype: protein_coding
description:
  Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22280
symbol: DSJ_22280
gene_biotype: protein_coding
description:
  Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22290
symbol: DSJ_22290
gene_biotype: protein_coding
description:
  Cellulose synthase regulator BcsB; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: DSJ_22295
symbol: DSJ_22295
gene_biotype: protein_coding
description:
  Cellulose synthase catalytic subunit (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.


ensembl_gene_id: DSJ_22300
symbol: DSJ_22300
gene_biotype: protein_coding
description:
  Cellulose synthase operon protein YhjQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22305
symbol: DSJ_22305
gene_biotype: protein_coding
description:
  Cellulose biosynthesis protein BcsO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22310
symbol: dppF
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DSJ_22320
symbol: dppC
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter permease DppC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22325
symbol: dppB
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22330
symbol: dppA
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22340
symbol: eptB
gene_biotype: protein_coding
description:
  Catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22345
symbol: DSJ_22345
gene_biotype: protein_coding
description:
  Organic hydroperoxide resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22355
symbol: DSJ_22355
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22365
symbol: tnaA
gene_biotype: protein_coding
description:
  Tryptophanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the beta-eliminating lyase family.


ensembl_gene_id: DSJ_22370
symbol: tnaB
gene_biotype: protein_coding
description:
  Tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22385
symbol: mtlA
gene_biotype: protein_coding
description:
  PTS mannitol transporter subunit IICBA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22390
symbol: mtlD
gene_biotype: protein_coding
description:
  Mannitol-1-phosphate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22395
symbol: mtlR
gene_biotype: protein_coding
description:
  MltR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22410
symbol: sodA
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: DSJ_22415
symbol: fdhD
gene_biotype: protein_coding
description:
  Sufurtransferase FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: DSJ_22420
symbol: fdhE
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: DSJ_22425
symbol: yibF
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22435
symbol: DSJ_22435
gene_biotype: protein_coding
description:
  MipA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22450
symbol: glyS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22455
symbol: glyQ
gene_biotype: protein_coding
description:
  glycine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22460
symbol: wecH
gene_biotype: protein_coding
description:
  Acetyltransferase; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.


ensembl_gene_id: DSJ_22465
symbol: yieH
gene_biotype: protein_coding
description:
  6-phosphogluconate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22470
symbol: DSJ_22470
gene_biotype: protein_coding
description:
  Adenine permease PurP; Involved in the transport or adenine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: DSJ_22475
symbol: rutE
gene_biotype: protein_coding
description:
  Malonic semialdehyde reductase; May reduce toxic product malonic semialdehyde to 3- hydroxypropionic acid, which is excreted.


ensembl_gene_id: DSJ_22480
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: DSJ_22485
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: DSJ_22490
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


