# geneInfo

ensembl_gene_id: HMPREF9333_00040
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF9333_00070
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HMPREF9333_00071
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMPREF9333_00087
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF9333_00089
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: HMPREF9333_00092
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF9333_00094
symbol: ecfA
gene_biotype: protein_coding
description:
  Hypothetical protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: HMPREF9333_00105
symbol: EHI56658.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF9333_00106
symbol: mrnC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: HMPREF9333_00108
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: HMPREF9333_00118
symbol: EHI56671.1
gene_biotype: protein_coding
description:
  Ham1 family protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMPREF9333_00130
symbol: atpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: HMPREF9333_00131
symbol: atpB
gene_biotype: protein_coding
description:
  Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: HMPREF9333_00139
symbol: thiM
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: HMPREF9333_00142
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: HMPREF9333_00150
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9333_00153
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF9333_00159
symbol: rnj
gene_biotype: protein_coding
description:
  Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: HMPREF9333_00161
symbol: EHI56714.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HMPREF9333_00166
symbol: EHI56719.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMPREF9333_00171
symbol: aroQ
gene_biotype: protein_coding
description:
  Dehydroquinase class II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: HMPREF9333_00172
symbol: aroE
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: HMPREF9333_00174
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: HMPREF9333_00178
symbol: metN
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF9333_00179
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF9333_00182
symbol: rsfS
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF9333_00184
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HMPREF9333_00186
symbol: obg
gene_biotype: protein_coding
description:
  GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF9333_00189
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF9333_00199
symbol: EHI56752.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: HMPREF9333_00212
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMPREF9333_00214
symbol: EHI56767.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9333_00226
symbol: cas2
gene_biotype: protein_coding
description:
  Hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF9333_00227
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF9333_00240
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF9333_00244
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: HMPREF9333_00245
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: HMPREF9333_00248
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9333_00249
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF9333_00250
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF9333_00251
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF9333_00252
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF9333_00254
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF9333_00255
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF9333_00256
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF9333_00257
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF9333_00259
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF9333_00260
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF9333_00261
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF9333_00262
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF9333_00263
symbol: rpsZ
gene_biotype: protein_coding
description:
  30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: HMPREF9333_00264
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF9333_00265
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMPREF9333_00266
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF9333_00267
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMPREF9333_00269
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF9333_00270
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF9333_00271
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF9333_00272
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF9333_00273
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF9333_00274
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMPREF9333_00276
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: HMPREF9333_00277
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF9333_00297
symbol: polC
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF9333_00298
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HMPREF9333_00300
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HMPREF9333_00302
symbol: EHI56440.1
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMPREF9333_00303
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF9333_00322
symbol: recA
gene_biotype: protein_coding
description:
  Hypothetical protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF9333_00327
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: HMPREF9333_00333
symbol: EHI56471.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: HMPREF9333_00336
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: HMPREF9333_00341
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: HMPREF9333_00360
symbol: plsY
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: HMPREF9333_00361
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF9333_00366
symbol: EHI56504.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: HMPREF9333_00371
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HMPREF9333_00384
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF9333_00386
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMPREF9333_00388
symbol: xseB
gene_biotype: protein_coding
description:
  Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMPREF9333_00389
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HMPREF9333_00390
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF9333_00393
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HMPREF9333_00394
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: HMPREF9333_00401
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HMPREF9333_00435
symbol: EHI56370.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: HMPREF9333_00458
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: HMPREF9333_00467
symbol: ftsH
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF9333_00468
symbol: EHI56403.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF9333_00469
symbol: tilS
gene_biotype: protein_coding
description:
  Hypothetical protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HMPREF9333_00475
symbol: EHI56410.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: HMPREF9333_00476
symbol: mfd
gene_biotype: protein_coding
description:
  Hypothetical protein; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF9333_00477
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF9333_00478
symbol: EHI56413.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: HMPREF9333_00480
symbol: rpsR
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF9333_00498
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: HMPREF9333_00499
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMPREF9333_00504
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF9333_00508
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: HMPREF9333_00509
symbol: tmcAL
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: HMPREF9333_00511
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMPREF9333_00512
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HMPREF9333_00513
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF9333_00514
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF9333_00515
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: HMPREF9333_00518
symbol: ybeY
gene_biotype: protein_coding
description:
  Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMPREF9333_00533
symbol: EHI56254.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: HMPREF9333_00534
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: HMPREF9333_00536
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: HMPREF9333_00542
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: HMPREF9333_00543
symbol: EHI56264.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMPREF9333_00548
symbol: scpA
gene_biotype: protein_coding
description:
  ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF9333_00549
symbol: EHI56270.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF9333_00550
symbol: EHI56271.1
gene_biotype: protein_coding
description:
  Hypothetical protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: HMPREF9333_00552
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: HMPREF9333_00553
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: HMPREF9333_00567
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: HMPREF9333_00573
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HMPREF9333_00580
symbol: polA
gene_biotype: protein_coding
description:
  Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: HMPREF9333_00581
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF9333_00582
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMPREF9333_00590
symbol: hslO
gene_biotype: protein_coding
description:
  Chaperonin HslO; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: HMPREF9333_00593
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF9333_00594
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF9333_00605
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: HMPREF9333_00609
symbol: coaX
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: HMPREF9333_00610
symbol: EHI56330.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: HMPREF9333_00611
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: HMPREF9333_00615
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMPREF9333_00617
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF9333_00634
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF9333_00636
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: HMPREF9333_00642
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: HMPREF9333_00644
symbol: EHI56114.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF9333_00645
symbol: greA
gene_biotype: protein_coding
description:
  Hypothetical protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF9333_00664
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF9333_00666
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF9333_00667
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF9333_00669
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: HMPREF9333_00670
symbol: EHI56140.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: HMPREF9333_00674
symbol: fumC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: HMPREF9333_00678
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: HMPREF9333_00683
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: HMPREF9333_00717
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF9333_00722
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HMPREF9333_00723
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HMPREF9333_00726
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMPREF9333_00728
symbol: EHI56198.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: HMPREF9333_00729
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: HMPREF9333_00732
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HMPREF9333_00733
symbol: trmD
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF9333_00737
symbol: EHI56207.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: HMPREF9333_00755
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMPREF9333_00758
symbol: miaB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: HMPREF9333_00759
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF9333_00760
symbol: mutL
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: HMPREF9333_00761
symbol: miaA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMPREF9333_00767
symbol: recU
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: HMPREF9333_00776
symbol: EHI55994.1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: HMPREF9333_00789
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF9333_00791
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H 2; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF9333_00795
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HMPREF9333_00798
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF9333_00806
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: HMPREF9333_00807
symbol: cbiN
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: HMPREF9333_00808
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMPREF9333_00813
symbol: EHI56031.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF9333_00814
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMPREF9333_00815
symbol: EHI56033.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: HMPREF9333_00817
symbol: sepF
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: HMPREF9333_00818
symbol: EHI56036.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMPREF9333_00834
symbol: EHI56052.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMPREF9333_00835
symbol: nnrD
gene_biotype: protein_coding
description:
  YjeF; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: HMPREF9333_00836
symbol: rex
gene_biotype: protein_coding
description:
  Hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: HMPREF9333_00841
symbol: EHI56059.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF9333_00842
symbol: rimO
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HMPREF9333_00843
symbol: EHI56061.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMPREF9333_00847
symbol: EHI56065.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.


ensembl_gene_id: HMPREF9333_00852
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: HMPREF9333_00855
symbol: sbcD
gene_biotype: protein_coding
description:
  Hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: HMPREF9333_00858
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF9333_00860
symbol: codY
gene_biotype: protein_coding
description:
  Hypothetical protein; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: HMPREF9333_00861
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF9333_00871
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF9333_00874
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HMPREF9333_00875
symbol: EHI55832.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: HMPREF9333_00894
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMPREF9333_00899
symbol: rlmN
gene_biotype: protein_coding
description:
  Cfr family radical SAM enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMPREF9333_00900
symbol: EHI55857.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: HMPREF9333_00902
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF9333_00903
symbol: def
gene_biotype: protein_coding
description:
  Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF9333_00904
symbol: priA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF9333_00905
symbol: murF
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF9333_00906
symbol: murE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: HMPREF9333_00921
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF9333_00925
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF9333_00929
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: HMPREF9333_00930
symbol: secF
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: HMPREF9333_00937
symbol: EHI55894.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HMPREF9333_00947
symbol: EHI55904.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMPREF9333_00948
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF9333_00949
symbol: EHI55906.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF9333_00958
symbol: EHI55915.1
gene_biotype: protein_coding
description:
  Hypothetical protein; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF9333_00959
symbol: EHI55916.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: HMPREF9333_00974
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: HMPREF9333_00976
symbol: EHI55933.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMPREF9333_00977
symbol: prmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HMPREF9333_00979
symbol: folD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF9333_00984
symbol: gcvPB
gene_biotype: protein_coding
description:
  Hypothetical protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: HMPREF9333_00985
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: HMPREF9333_00986
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: HMPREF9333_00987
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: HMPREF9333_00988
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and  [...]


ensembl_gene_id: HMPREF9333_00990
symbol: grpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dep [...]


ensembl_gene_id: HMPREF9333_00991
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: HMPREF9333_00995
symbol: EHI55952.1
gene_biotype: protein_coding
description:
  Preprotein translocase; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMPREF9333_00997
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMPREF9333_00998
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMPREF9333_00999
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMPREF9333_01000
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF9333_01001
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor tig; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF9333_01002
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMPREF9333_01004
symbol: EHI55961.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF9333_01013
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase 1; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF9333_01017
symbol: truB
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF9333_01019
symbol: rbfA
gene_biotype: protein_coding
description:
  Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF9333_01020
symbol: infB
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF9333_01024
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF9333_01025
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMPREF9333_01071
symbol: EHI55724.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HMPREF9333_01080
symbol: recD2
gene_biotype: protein_coding
description:
  RecD/TraA family helicase; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: HMPREF9333_01088
symbol: EHI55741.1
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: HMPREF9333_01102
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMPREF9333_01103
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF9333_01104
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HMPREF9333_01105
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF9333_01106
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF9333_01108
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9333_01109
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9333_01115
symbol: ispE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: HMPREF9333_01117
symbol: EHI55770.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HMPREF9333_01120
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: HMPREF9333_01131
symbol: EHI55784.1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).


ensembl_gene_id: HMPREF9333_01136
symbol: EHI55789.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: HMPREF9333_01137
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMPREF9333_01141
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF9333_01142
symbol: EHI55688.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF9333_01143
symbol: dnaX
gene_biotype: protein_coding
description:
  Hypothetical protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF9333_01144
symbol: pfkA-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: HMPREF9333_01169
symbol: tadA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF9333_01182
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HMPREF9333_01183
symbol: EHI55468.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: HMPREF9333_01210
symbol: EHI55495.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: HMPREF9333_01211
symbol: glpK
gene_biotype: protein_coding
description:
  Hypothetical protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: HMPREF9333_01218
symbol: glgB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: HMPREF9333_01249
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: HMPREF9333_01259
symbol: hppA
gene_biotype: protein_coding
description:
  Hypothetical protein; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: HMPREF9333_01268
symbol: EHI55553.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HMPREF9333_01269
symbol: EHI55554.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase 1; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HMPREF9333_01273
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HMPREF9333_01285
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: HMPREF9333_01295
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HMPREF9333_01302
symbol: dtd
gene_biotype: protein_coding
description:
  Hypothetical protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: HMPREF9333_01304
symbol: atpD-2
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: HMPREF9333_01305
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: HMPREF9333_01306
symbol: atpA-2
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: HMPREF9333_01307
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9333_01308
symbol: atpF
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: HMPREF9333_01309
symbol: atpE
gene_biotype: protein_coding
description:
  Hypothetical protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9333_01310
symbol: atpB-2
gene_biotype: protein_coding
description:
  ATP synthase F0; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: HMPREF9333_01335
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: HMPREF9333_01337
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HMPREF9333_01338
symbol: pyrC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: HMPREF9333_01351
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF9333_01352
symbol: prmC
gene_biotype: protein_coding
description:
  Hypothetical protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: HMPREF9333_01360
symbol: EHI55645.1
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMPREF9333_01365
symbol: EHI55650.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: HMPREF9333_01368
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF9333_01370
symbol: EHI55655.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: HMPREF9333_01377
symbol: EHI55662.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: HMPREF9333_01384
symbol: EHI55669.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF9333_01386
symbol: EHI55671.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: HMPREF9333_01387
symbol: EHI55672.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: HMPREF9333_01388
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: HMPREF9333_01394
symbol: cas2-2
gene_biotype: protein_coding
description:
  CRISPR-associated protein cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF9333_01396
symbol: EHI55260.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: HMPREF9333_01402
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9333_01406
symbol: EHI55270.1
gene_biotype: protein_coding
description:
  Hypothetical protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF9333_01410
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: HMPREF9333_01411
symbol: tsaD
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF9333_01412
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: HMPREF9333_01413
symbol: EHI55277.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: HMPREF9333_01420
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF9333_01421
symbol: secA
gene_biotype: protein_coding
description:
  Translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: HMPREF9333_01422
symbol: hpf
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: HMPREF9333_01446
symbol: EHI55310.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF9333_01471
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: HMPREF9333_01475
symbol: nnrE
gene_biotype: protein_coding
description:
  YjeF; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.


ensembl_gene_id: HMPREF9333_01504
symbol: potA
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: HMPREF9333_01506
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMPREF9333_01509
symbol: msrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMPREF9333_01521
symbol: EHI55385.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: HMPREF9333_01563
symbol: EHI55427.1
gene_biotype: protein_coding
description:
  TENA/THI-4 family protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: HMPREF9333_01569
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF9333_01570
symbol: rplJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF9333_01571
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF9333_01572
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF9333_01573
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF9333_01619
symbol: mutS2
gene_biotype: protein_coding
description:
  Hypothetical protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: HMPREF9333_01625
symbol: murG
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF9333_01653
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF9333_01656
symbol: metG
gene_biotype: protein_coding
description:
  Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: HMPREF9333_01667
symbol: EHI55148.1
gene_biotype: protein_coding
description:
  Hypothetical protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF9333_01706
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMPREF9333_01709
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: HMPREF9333_01725
symbol: EHI55105.1
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins.


ensembl_gene_id: HMPREF9333_01740
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMPREF9333_01744
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: HMPREF9333_01793
symbol: EHI54946.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: HMPREF9333_01795
symbol: ribBA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: HMPREF9333_01796
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: HMPREF9333_01811
symbol: EHI54964.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF9333_01816
symbol: acpS
gene_biotype: protein_coding
description:
  Hypothetical protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF9333_01819
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HMPREF9333_01821
symbol: purE
gene_biotype: protein_coding
description:
  AIR carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMPREF9333_01826
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF9333_01833
symbol: EHI54986.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: HMPREF9333_01834
symbol: EHI54987.1
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: HMPREF9333_01837
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: HMPREF9333_01838
symbol: uppP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMPREF9333_01852
symbol: rnfB
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: HMPREF9333_01853
symbol: rnfA
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMPREF9333_01855
symbol: rnfG
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: HMPREF9333_01856
symbol: rnfD
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: HMPREF9333_01857
symbol: rnfC
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: HMPREF9333_01859
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: HMPREF9333_01871
symbol: EHI55024.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF9333_01872
symbol: dnaG
gene_biotype: protein_coding
description:
  Hypothetical protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMPREF9333_01878
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: HMPREF9333_01879
symbol: sigA
gene_biotype: protein_coding
description:
  Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF9333_01882
symbol: birA
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: HMPREF9333_01986
symbol: EHI54835.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: HMPREF9333_02016
symbol: rsmG
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: HMPREF9333_02017
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF9333_02018
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMPREF9333_02021
symbol: EHI54820.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: HMPREF9333_02022
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF9333_02025
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF9333_02026
symbol: EHI54825.1
gene_biotype: protein_coding
description:
  DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...]


ensembl_gene_id: HMPREF9333_02028
symbol: recF
gene_biotype: protein_coding
description:
  Hypothetical protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: HMPREF9333_02029
symbol: gyrB
gene_biotype: protein_coding
description:
  B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9333_02030
symbol: gyrA
gene_biotype: protein_coding
description:
  A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9333_02139
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: HMPREF9333_02145
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF9333_02164
symbol: EHI54704.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: HMPREF9333_02229
symbol: accD
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HMPREF9333_02230
symbol: EHI54588.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF9333_02231
symbol: fabZ
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: HMPREF9333_02233
symbol: EHI54591.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF9333_02234
symbol: EHI54592.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9333_02238
symbol: fabH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMPREF9333_02239
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


# pathwayInfo

id: CL:1001
description: Aromatic amino acid family biosynthetic process, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1001_Aromatic_amino_acid_family_biosynthetic_process,_and_GNAT_domain


id: CL:1003
description: Chorismate metabolic process, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1003_Chorismate_metabolic_process,_and_ATP-cone_domain


id: CL:1017
description: Chorismate biosynthetic process, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1017_Chorismate_biosynthetic_process,_and_ATP-cone_domain


id: CL:102
description: Ribosomal protein, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:102_Ribosomal_protein,_and_Translation_regulator_activity


id: CL:1036
description: Mixed, incl. Nicotinamide nucleotide metabolic process, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1036_Mixed,_incl._Nicotinamide_nucleotide_metabolic_process,_and_Riboflavin_metabolism


id: CL:1038
description: Nicotinamide nucleotide metabolic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1038_Nicotinamide_nucleotide_metabolic_process,_and_RNA_capping


id: CL:1040
description: Nicotinamide nucleotide metabolic process, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1040_Nicotinamide_nucleotide_metabolic_process,_and_NAD+_binding


id: CL:1058
description: NAD biosynthetic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1058_NAD_biosynthetic_process,_and_RNA_capping


id: CL:1070
description: Riboflavin metabolic process, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1070_Riboflavin_metabolic_process,_and_HTH_domain


id: CL:1091
description: Mixed, incl. Ribosome biogenesis, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1091_Mixed,_incl._Ribosome_biogenesis,_and_Chromosome_segregation


id: CL:1092
description: Mixed, incl. Ribosome biogenesis, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1092_Mixed,_incl._Ribosome_biogenesis,_and_DUF218_domain


id: CL:1094
description: Mixed, incl. DUF218 domain, and Metalloenzyme, LuxS/M16 peptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1094_Mixed,_incl._DUF218_domain,_and_Metalloenzyme,_LuxS/M16_peptidase-like


id: CL:1110
description: Mixed, incl. RNA capping, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1110_Mixed,_incl._RNA_capping,_and_Peptidase_U32


id: CL:1119
description: Mixed, incl. Chromosome segregation, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1119_Mixed,_incl._Chromosome_segregation,_and_CMP_kinase_activity


id: CL:1121
description: Mixed, incl. Chromosome partition, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1121_Mixed,_incl._Chromosome_partition,_and_AAA_domain


id: CL:1142
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1142_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1143
description: Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1143_Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1145
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1145_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1146
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1146_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:1147
description: O-Antigen nucleotide sugar biosynthesis, and GHMP kinase, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1147_O-Antigen_nucleotide_sugar_biosynthesis,_and_GHMP_kinase,_C-terminal_domain_superfamily


id: CL:1149
description: O-Antigen nucleotide sugar biosynthesis, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1149_O-Antigen_nucleotide_sugar_biosynthesis,_and_CoA-binding_domain


id: CL:115
description: Small ribosomal subunit, and Ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:115_Small_ribosomal_subunit,_and_Ribosomal_protein


id: CL:1150
description: O-Antigen nucleotide sugar biosynthesis, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1150_O-Antigen_nucleotide_sugar_biosynthesis,_and_CoA-binding_domain


id: CL:1166
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1166_Polyketide_sugar_unit_biosynthesis


id: CL:1184
description: Mixed, incl. Glycosyl transferase, family 1, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1184_Mixed,_incl._Glycosyl_transferase,_family_1,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:1186
description: Glycosyl transferase, family 1, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1186_Glycosyl_transferase,_family_1,_and_ABC-2_type_transporter


id: CL:1205
description: Mixed, incl. Glycosyl transferases group 1, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1205_Mixed,_incl._Glycosyl_transferases_group_1,_and_Protein_tyrosine_kinase_activity


id: CL:1206
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1206_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Protein tyrosine kinase activity, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:1208
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1208_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_CoA-binding_domain


id: CL:1218
description: Protein tyrosine kinase activity, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1218_Protein_tyrosine_kinase_activity,_and_LytR_cpsA_psr_family


id: CL:1227
description: Mixed, incl. Glycosyl transferases group 1, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1227_Mixed,_incl._Glycosyl_transferases_group_1,_and_O-Antigen_ligase


id: CL:1247
description: Mixed, incl. Starch and sucrose metabolism, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1247_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Pentose_phosphate_pathway


id: CL:1248
description: Mixed, incl. Starch and sucrose metabolism, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1248_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Glycolytic_process


id: CL:1249
description: Glycolysis / Gluconeogenesis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1249_Glycolysis_/_Gluconeogenesis,_and_Pentose_phosphate_pathway


id: CL:1250
description: Glycolysis / Gluconeogenesis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1250_Glycolysis_/_Gluconeogenesis,_and_NADPH_regeneration


id: CL:1252
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1252_Glycolysis,_and_NADPH_regeneration


id: CL:1255
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1255_Glycolysis,_and_NADPH_regeneration


id: CL:1281
description: Mixed, incl. Intramolecular oxidoreductase activity, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1281_Mixed,_incl._Intramolecular_oxidoreductase_activity,_and_ROK_family


id: CL:1295
description: Mixed, incl. UMP salvage, and Ribose-phosphate pyrophosphokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1295_Mixed,_incl._UMP_salvage,_and_Ribose-phosphate_pyrophosphokinase


id: CL:1329
description: Mixed, incl. Phosphotransferase system (PTS), and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1329_Mixed,_incl._Phosphotransferase_system_(PTS),_and_AI-2E_family_transporter


id: CL:1348
description: Mixed, incl. Protein dephosphorylation, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1348_Mixed,_incl._Protein_dephosphorylation,_and_Glycosyl_transferase_family_2


id: CL:1349
description: Mixed, incl. Glycosyl transferase family 2, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1349_Mixed,_incl._Glycosyl_transferase_family_2,_and_Peptidase_M41


id: CL:1351
description: Mixed, incl. Peptidase M41, and Purine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1351_Mixed,_incl._Peptidase_M41,_and_Purine_salvage


id: CL:1372
description: Protein dephosphorylation, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1372_Protein_dephosphorylation,_and_Ascorbate_and_aldarate_metabolism


id: CL:1381
description: Mixed, incl. Phospholipid metabolism, and Polyphosphate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1381_Mixed,_incl._Phospholipid_metabolism,_and_Polyphosphate_kinase


id: CL:1382
description: Phospholipid metabolism, and Polyphosphate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1382_Phospholipid_metabolism,_and_Polyphosphate_kinase


id: CL:1403
description: Phosphate ion transport, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1403_Phosphate_ion_transport,_and_PDZ_domain_6


id: CL:1412
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1412_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_tRNA_3-end_processing


id: CL:1415
description: tRNA threonylcarbamoyladenosine modification, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1415_tRNA_threonylcarbamoyladenosine_modification,_and_tRNA_3-end_processing


id: CL:1432
description: Mixed, incl. Membrane, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1432_Mixed,_incl._Membrane,_and_Extracellular_region


id: CL:1433
description: Mixed, incl. Cell wall organization or biogenesis, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1433_Mixed,_incl._Cell_wall_organization_or_biogenesis,_and_Transmembrane


id: CL:1434
description: Mixed, incl. Cell wall organization or biogenesis, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1434_Mixed,_incl._Cell_wall_organization_or_biogenesis,_and_Extracellular_region


id: CL:1435
description: Mixed, incl. Extracellular region, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1435_Mixed,_incl._Extracellular_region,_and_Transmembrane


id: CL:1436
description: Mixed, incl. Extracellular region, and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1436_Mixed,_incl._Extracellular_region,_and_Carbohydrate_metabolic_process


id: CL:1438
description: Mixed, incl. Extracellular region, and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1438_Mixed,_incl._Extracellular_region,_and_Carbohydrate_metabolic_process


id: CL:1439
description: Mixed, incl. Extracellular region, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1439_Mixed,_incl._Extracellular_region,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1441
description: Mixed, incl. Extracellular region, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1441_Mixed,_incl._Extracellular_region,_and_LytR_cpsA_psr_family


id: CL:1442
description: Mixed, incl. Cell wall/choline-binding repeat, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1442_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:1444
description: Mixed, incl. Cell wall/choline-binding repeat, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1444_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:1447
description: Cell wall/choline-binding repeat, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1447_Cell_wall/choline-binding_repeat,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:1449
description: N-acetylmuramoyl-L-alanine amidase activity, and Cell wall/choline-binding repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1449_N-acetylmuramoyl-L-alanine_amidase_activity,_and_Cell_wall/choline-binding_repeat


id: CL:1452
description: N-acetylmuramoyl-L-alanine amidase activity, and L,D-transpeptidase catalytic domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1452_N-acetylmuramoyl-L-alanine_amidase_activity,_and_L,D-transpeptidase_catalytic_domain-like


id: CL:1497
description: NlpC/P60 family, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1497_NlpC/P60_family,_and_Carboxypeptidase_activity


id: CL:1511
description: Mixed, incl. Glycosyl transferase family 2, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1511_Mixed,_incl._Glycosyl_transferase_family_2,_and_NAD+_kinase_activity


id: CL:1513
description: Lipopolysaccharide biosynthesis, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1513_Lipopolysaccharide_biosynthesis,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:152
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:152_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:1536
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1536_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Protein_of_unknown_function_(DUF1292)

description:
  Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and Protein of unknown function (DUF1292)


id: CL:1538
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1538_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Protein_of_unknown_function_(DUF1292)

description:
  Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and Protein of unknown function (DUF1292)


id: CL:1540
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1540_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Protein_of_unknown_function_(DUF1292)

description:
  Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and Protein of unknown function (DUF1292)


id: CL:1541
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1541_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Protein_of_unknown_function_(DUF1292)

description:
  Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Protein of unknown function (DUF1292)


id: CL:1543
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1543_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Cell_division_site


id: CL:1545
description: Mixed, incl. TPR repeat, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1545_Mixed,_incl._TPR_repeat,_and_Cell_division_site


id: CL:1561
description: Mixed, incl. Cell division site, and Protein of unknown function (DUF1292)
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1561_Mixed,_incl._Cell_division_site,_and_Protein_of_unknown_function_(DUF1292)


id: CL:1590
description: Mixed, incl. Type II/IV secretion system protein, and Suppression of apoptosis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1590_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_Suppression_of_apoptosis


id: CL:1616
description: Mixed, incl. VanW like protein, and Peptidyl-cysteine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1616_Mixed,_incl._VanW_like_protein,_and_Peptidyl-cysteine_modification


id: CL:163
description: rRNA-binding, and Protein transport by the Sec complex
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:163_rRNA-binding,_and_Protein_transport_by_the_Sec_complex


id: CL:1638
description: Mixed, incl. Serine hydrolase activity, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1638_Mixed,_incl._Serine_hydrolase_activity,_and_Porin_activity


id: CL:1640
description: Mixed, incl. Peptidase S1C, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1640_Mixed,_incl._Peptidase_S1C,_and_Porin_activity


id: CL:1641
description: Mostly uncharacterized, incl. FtsK domain, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1641_Mostly_uncharacterized,_incl._FtsK_domain,_and_SGNH_hydrolase_superfamily


id: CL:1644
description: Mixed, incl. FtsK domain, and Listeria/Bacterioides repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1644_Mixed,_incl._FtsK_domain,_and_Listeria/Bacterioides_repeat


id: CL:166
description: Mixed, incl. Ribosomal protein L2, domain 2, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:166_Mixed,_incl._Ribosomal_protein_L2,_domain_2,_and_K_Homology_domain,_type_2


id: CL:1664
description: Peptidase S1C, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1664_Peptidase_S1C,_and_Porin_activity


id: CL:1686
description: Mixed, incl. Regulation of cell shape, and PLP-binding barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1686_Mixed,_incl._Regulation_of_cell_shape,_and_PLP-binding_barrel


id: CL:1687
description: Mixed, incl. Regulation of cell shape, and PLP-binding barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1687_Mixed,_incl._Regulation_of_cell_shape,_and_PLP-binding_barrel


id: CL:1688
description: Mixed, incl. Regulation of cell shape, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1688_Mixed,_incl._Regulation_of_cell_shape,_and_Septation


id: CL:1689
description: Regulation of cell shape, and MGS-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1689_Regulation_of_cell_shape,_and_MGS-like_domain


id: CL:1691
description: Mixed, incl. Cell cycle protein, and Cell morphogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1691_Mixed,_incl._Cell_cycle_protein,_and_Cell_morphogenesis


id: CL:1708
description: Mixed, incl. Septation, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1708_Mixed,_incl._Septation,_and_Thylakoid


id: CL:1719
description: Peptidoglycan synthesis, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1719_Peptidoglycan_synthesis,_and_Vancomycin_resistance


id: CL:1722
description: Peptidoglycan synthesis, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1722_Peptidoglycan_synthesis,_and_Cell_cycle_protein


id: CL:1725
description: Mur ligase, central, and UDP-glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1725_Mur_ligase,_central,_and_UDP-glycosyltransferase_activity


id: CL:1751
description: Mixed, incl. GntR, C-terminal, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1751_Mixed,_incl._GntR,_C-terminal,_and_Peptidyl-serine_acetylation


id: CL:1763
description: Mostly uncharacterized, incl. Lipid metabolism, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1763_Mostly_uncharacterized,_incl._Lipid_metabolism,_and_MatE


id: CL:1764
description: Mostly uncharacterized, incl. MatE, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1764_Mostly_uncharacterized,_incl._MatE,_and_CNNM,_transmembrane_domain


id: CL:1766
description: Mixed, incl. Phosphatidylglycerol metabolic process, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1766_Mixed,_incl._Phosphatidylglycerol_metabolic_process,_and_TRAM_domain


id: CL:1787
description: Mixed, incl. Antibiotic resistance, and glucose-1-phosphate thymidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1787_Mixed,_incl._Antibiotic_resistance,_and_glucose-1-phosphate_thymidylyltransferase_activity


id: CL:1802
description: Mixed, incl. Coenzyme A metabolic process, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1802_Mixed,_incl._Coenzyme_A_metabolic_process,_and_RNA_polymerase_sigma-70_like


id: CL:1803
description: RNA polymerase sigma-70 like, and PepSY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1803_RNA_polymerase_sigma-70_like,_and_PepSY_domain


id: CL:1812
description: Coenzyme A metabolic process, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1812_Coenzyme_A_metabolic_process,_and_tRNA_3-end_processing


id: CL:1821
description: Mostly uncharacterized, incl. Polyol metabolic process, and DNA-mediated transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1821_Mostly_uncharacterized,_incl._Polyol_metabolic_process,_and_DNA-mediated_transformation


id: CL:1822
description: Mixed, incl. Polyol metabolic process, and Cellular macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1822_Mixed,_incl._Polyol_metabolic_process,_and_Cellular_macromolecule_catabolic_process


id: CL:1824
description: Mixed, incl. DNA catabolic process, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1824_Mixed,_incl._DNA_catabolic_process,_and_Prenyltransferase_activity


id: CL:1828
description: DNA catabolic process, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1828_DNA_catabolic_process,_and_AAA_domain


id: CL:1851
description: Mixed, incl. Polyol metabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1851_Mixed,_incl._Polyol_metabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:1852
description: Mixed, incl. DEAD/DEAH box helicase domain, and L,D-transpeptidase central domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1852_Mixed,_incl._DEAD/DEAH_box_helicase_domain,_and_L,D-transpeptidase_central_domain-like_superfamily


id: CL:187
description: Large ribosomal subunit, and Ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:187_Large_ribosomal_subunit,_and_Ribosome


id: CL:1877
description: Mixed, incl. DNA-mediated transformation, and GAF-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1877_Mixed,_incl._DNA-mediated_transformation,_and_GAF-like_domain_superfamily


id: CL:1879
description: DNA-mediated transformation, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1879_DNA-mediated_transformation,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:189
description: Large ribosomal subunit, and Nucleotide-binding alpha-beta plait domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:189_Large_ribosomal_subunit,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily


id: CL:1900
description: Mixed, incl. Sporulation, and Magnesium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1900_Mixed,_incl._Sporulation,_and_Magnesium_ion_transport


id: CL:1901
description: Mixed, incl. Sporulation, and Peptidase M18
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1901_Mixed,_incl._Sporulation,_and_Peptidase_M18


id: CL:1904
description: Mixed, incl. Guanylate kinase homologues., and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1904_Mixed,_incl._Guanylate_kinase_homologues.,_and_O-methyltransferase_activity


id: CL:1927
description: Mixed, incl. SEC-C motif, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1927_Mixed,_incl._SEC-C_motif,_and_AI-2E_family_transporter


id: CL:1943
description: Protein ubiquitination, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1943_Protein_ubiquitination,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:1952
description: Mixed, incl. Potassium ion transport, and Inorganic diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1952_Mixed,_incl._Potassium_ion_transport,_and_Inorganic_diphosphatase_activity


id: CL:1954
description: Mixed, incl. Inorganic diphosphatase activity, and Phosphoenolpyruvate carboxykinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1954_Mixed,_incl._Inorganic_diphosphatase_activity,_and_Phosphoenolpyruvate_carboxykinase_activity


id: CL:1972
description: Potassium ion transport, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1972_Potassium_ion_transport,_and_Rhodanese-like_domain


id: CL:1981
description: Mixed, incl. Pteridine-containing compound biosynthetic process, and Phosphodiesterase MJ0936/Vps29
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1981_Mixed,_incl._Pteridine-containing_compound_biosynthetic_process,_and_Phosphodiesterase_MJ0936/Vps29


id: CL:1982
description: Mixed, incl. Phosphodiesterase MJ0936/Vps29, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1982_Mixed,_incl._Phosphodiesterase_MJ0936/Vps29,_and_Peptidase_dimerisation_domain


id: CL:1983
description: Phosphodiesterase MJ0936/Vps29, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1983_Phosphodiesterase_MJ0936/Vps29,_and_Peptidase_dimerisation_domain


id: CL:1994
description: Mixed, incl. CGCAxxGCC motif, and Dicarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:1994_Mixed,_incl._CGCAxxGCC_motif,_and_Dicarboxylic_acid_transport


id: CL:2004
description: Mixed, incl. Pteridine-containing compound biosynthetic process, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2004_Mixed,_incl._Pteridine-containing_compound_biosynthetic_process,_and_Peptidase_U32


id: CL:2020
description: Mixed, incl. Proton-transporting two-sector ATPase complex, and TerD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2020_Mixed,_incl._Proton-transporting_two-sector_ATPase_complex,_and_TerD_domain


id: CL:2021
description: Mixed, incl. TerD domain, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2021_Mixed,_incl._TerD_domain,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2024
description: Mixed, incl. TerD domain, and Toxic anion resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2024_Mixed,_incl._TerD_domain,_and_Toxic_anion_resistance


id: CL:2026
description: Mixed, incl. TerD domain, and Nucleoside salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2026_Mixed,_incl._TerD_domain,_and_Nucleoside_salvage


id: CL:2052
description: ATPase-coupled ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2052_ATPase-coupled_ion_transmembrane_transporter_activity


id: CL:2068
description: Mixed, incl. Aminopeptidase activity, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2068_Mixed,_incl._Aminopeptidase_activity,_and_VanZ-like


id: CL:2070
description: Mixed, incl. VanZ-like, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2070_Mixed,_incl._VanZ-like,_and_Acetyltransferase_(GNAT)_domain


id: CL:2087
description: Mixed, incl. Antibiotic resistance, and Toxic anion resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2087_Mixed,_incl._Antibiotic_resistance,_and_Toxic_anion_resistance


id: CL:2103
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2103_Mostly_uncharacterized,_incl._Pyridoxamine_5-phosphate_oxidase,_and_SCP2_sterol-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. Pyridoxamine 5-phosphate oxidase, and SCP2 sterol-binding domain superfamily


id: CL:2104
description: Mixed, incl. Pyridoxamine 5-phosphate oxidase, and SCP2 sterol-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2104_Mixed,_incl._Pyridoxamine_5-phosphate_oxidase,_and_SCP2_sterol-binding_domain_superfamily


id: CL:2117
description: Mixed, incl. 2-deoxyribonucleotide metabolic process, and tRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2117_Mixed,_incl._2-deoxyribonucleotide_metabolic_process,_and_tRNA_methylation


id: CL:2129
description: Mixed, incl. Fermentation, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2129_Mixed,_incl._Fermentation,_and_Aminotransferase_class_V_domain


id: CL:2130
description: Mixed, incl. Aminotransferase class V domain, and Sulfur carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2130_Mixed,_incl._Aminotransferase_class_V_domain,_and_Sulfur_carrier_activity


id: CL:2131
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2131_Mixed,_incl._Aminotransferase_class-V,_pyridoxal-phosphate_binding_site,_and_Iron-sulfur_cluster_assembly

description:
  Mixed, incl. Aminotransferase class-V, pyridoxal-phosphate binding site, and Iron-sulfur cluster assembly


id: CL:2133
description: DsrEFH-like, and Putative Se/S carrier protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2133_DsrEFH-like,_and_Putative_Se/S_carrier_protein-like


id: CL:2149
description: Iron-sulfur cluster assembly, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2149_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase


id: CL:2160
description: Mixed, incl. TusA-like domain, and Putative Se/S carrier protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2160_Mixed,_incl._TusA-like_domain,_and_Putative_Se/S_carrier_protein-like


id: CL:2169
description: Mixed, incl. Fermentation, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2169_Mixed,_incl._Fermentation,_and_Ammonia-lyase_activity


id: CL:2170
description: Fermentation, and CoA-transferase family III
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2170_Fermentation,_and_CoA-transferase_family_III


id: CL:2190
description: Mixed, incl. ATP-cone domain, and 6-O-methylguanine DNA methyltransferase, DNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2190_Mixed,_incl._ATP-cone_domain,_and_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: CL:2206
description: Thiamine biosynthetic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2206_Thiamine_biosynthetic_process,_and_ThiF_family


id: CL:2209
description: Thiamine biosynthetic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2209_Thiamine_biosynthetic_process,_and_ThiF_family


id: CL:2235
description: Mixed, incl. Phosphorelay signal transduction system, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2235_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_ABC_transporters


id: CL:2236
description: Mixed, incl. Phosphorelay signal transduction system, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2236_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_FtsX-like_permease_family


id: CL:2237
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2237_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:2238
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2238_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:2239
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2239_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:2240
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2240_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:2241
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2241_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:2244
description: Mixed, incl. Biotin-lipoyl like, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2244_Mixed,_incl._Biotin-lipoyl_like,_and_Outer_membrane_efflux_protein


id: CL:2270
description: Mixed, incl. MacB-like periplasmic core domain, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2270_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_Iron_ion_transport


id: CL:2288
description: Mixed, incl. HotDog domain superfamily, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2288_Mixed,_incl._HotDog_domain_superfamily,_and_Major_facilitator_superfamily


id: CL:2306
description: Mixed, incl. Nickel cation binding, and Domain of unknown function DUF1858
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2306_Mixed,_incl._Nickel_cation_binding,_and_Domain_of_unknown_function_DUF1858


id: CL:2315
description: Mostly uncharacterized, incl. DNA-binding HTH domain, TetR-type, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2315_Mostly_uncharacterized,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Zinc-ribbon_domain


id: CL:2316
description: Mixed, incl. Zinc-ribbon domain, and DeoR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2316_Mixed,_incl._Zinc-ribbon_domain,_and_DeoR-type_HTH_domain


id: CL:2318
description: Mixed, incl. Zinc-ribbon domain, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2318_Mixed,_incl._Zinc-ribbon_domain,_and_ABC-2_family_transporter_protein


id: CL:2336
description: Mixed, incl. Parallel beta-helix repeats, and DNA-binding HTH domain, TetR-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2336_Mixed,_incl._Parallel_beta-helix_repeats,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site


id: CL:2349
description: Phosphorelay signal transduction system, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2349_Phosphorelay_signal_transduction_system,_and_Periplasmic_binding_protein-like_I


id: CL:2350
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2350_Phosphorelay_signal_transduction_system


id: CL:2358
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2358_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain, and OmpR/PhoB-type DNA-binding domain


id: CL:2404
description: Mixed, incl. VanZ-like, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2404_Mixed,_incl._VanZ-like,_and_MacB,_ATP-binding_domain


id: CL:2414
description: Mixed, incl. Carbohydrate binding, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2414_Mixed,_incl._Carbohydrate_binding,_and_Pentose_and_glucuronate_interconversions


id: CL:2415
description: Mixed, incl. Carbohydrate binding, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2415_Mixed,_incl._Carbohydrate_binding,_and_Pentose_and_glucuronate_interconversions


id: CL:2428
description: Mixed, incl. Cache domain, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2428_Mixed,_incl._Cache_domain,_and_CdaR,_GGDEF-like_domain


id: CL:2448
description: Mixed, incl. Flavodoxin, conserved site, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2448_Mixed,_incl._Flavodoxin,_conserved_site,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2449
description: Mixed, incl. Flavodoxin, conserved site, and Phosphoenolpyruvate carboxykinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2449_Mixed,_incl._Flavodoxin,_conserved_site,_and_Phosphoenolpyruvate_carboxykinase_activity


id: CL:2461
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Pyridoxal-phosphate dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2461_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Pyridoxal-phosphate_dependent_enzyme


id: CL:2479
description: Mixed, incl. Carbohydrate derivative catabolic process, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2479_Mixed,_incl._Carbohydrate_derivative_catabolic_process,_and_ABC_transporter,_permease


id: CL:2481
description: Pyrimidine nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2481_Pyrimidine_nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:2505
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2505_Mostly_uncharacterized,_incl._Electron_transport,_and_D12_class_N6_adenine-specific_DNA_methyltransferase

description:
  Mostly uncharacterized, incl. Electron transport, and D12 class N6 adenine-specific DNA methyltransferase


id: CL:2506
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2506_Mostly_uncharacterized,_incl._Electron_transport,_and_D12_class_N6_adenine-specific_DNA_methyltransferase

description:
  Mostly uncharacterized, incl. Electron transport, and D12 class N6 adenine-specific DNA methyltransferase


id: CL:2507
description: Mixed, incl. Electron transport, and D12 class N6 adenine-specific DNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2507_Mixed,_incl._Electron_transport,_and_D12_class_N6_adenine-specific_DNA_methyltransferase


id: CL:2509
description: Mixed, incl. D12 class N6 adenine-specific DNA methyltransferase, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2509_Mixed,_incl._D12_class_N6_adenine-specific_DNA_methyltransferase,_and_Response_to_abiotic_stimulus


id: CL:2511
description: Response to abiotic stimulus, and SWIM zinc finger
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2511_Response_to_abiotic_stimulus,_and_SWIM_zinc_finger


id: CL:2525
description: D12 class N6 adenine-specific DNA methyltransferase, and Cro/C1-type HTH DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2525_D12_class_N6_adenine-specific_DNA_methyltransferase,_and_Cro/C1-type_HTH_DNA-binding_domain


id: CL:2540
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2540_Rubredoxin-oxygen_oxidoreductase,_and_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors

description:
  Rubredoxin-oxygen oxidoreductase, and Oxidoreductase activity, acting on other nitrogenous compounds as donors


id: CL:2556
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2556_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_Acetyltransferase_(GNAT)_family

description:
  Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and Acetyltransferase (GNAT) family


id: CL:2568
description: Mixed, incl. Potassium ion binding, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2568_Mixed,_incl._Potassium_ion_binding,_and_Other_glycan_degradation


id: CL:2585
description: Mixed, incl. Glycine radical domain, and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2585_Mixed,_incl._Glycine_radical_domain,_and_Malic_oxidoreductase


id: CL:2586
description: Mixed, incl. Glycine radical domain, and Organic radical enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2586_Mixed,_incl._Glycine_radical_domain,_and_Organic_radical_enzyme_activase


id: CL:2597
description: Mixed, incl. Malic oxidoreductase, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2597_Mixed,_incl._Malic_oxidoreductase,_and_Glycerophospholipid_metabolism


id: CL:2609
description: Mixed, incl. Toxin-antitoxin complex, and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2609_Mixed,_incl._Toxin-antitoxin_complex,_and_Cell_aggregation


id: CL:2610
description: Mixed, incl. Toxin-antitoxin complex, and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2610_Mixed,_incl._Toxin-antitoxin_complex,_and_Cell_aggregation


id: CL:2613
description: Cell aggregation, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2613_Cell_aggregation,_and_Glycosyl_transferase_family_2


id: CL:2626
description: Toxin-antitoxin complex, and Regulation of RNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2626_Toxin-antitoxin_complex,_and_Regulation_of_RNA_biosynthetic_process


id: CL:2639
description: Mostly uncharacterized, incl. Lon protease, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2639_Mostly_uncharacterized,_incl._Lon_protease,_and_LytTr_DNA-binding_domain


id: CL:2642
description: Mixed, incl. Lon protease, and Rescue of stalled ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2642_Mixed,_incl._Lon_protease,_and_Rescue_of_stalled_ribosome


id: CL:2666
description: Mixed, incl. ABC transporters, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2666_Mixed,_incl._ABC_transporters,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:2667
description: Mixed, incl. ABC transporters, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2667_Mixed,_incl._ABC_transporters,_and_Homeobox-like_domain_superfamily


id: CL:2668
description: Mixed, incl. ABC transporters, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2668_Mixed,_incl._ABC_transporters,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:2669
description: ABC transporters, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2669_ABC_transporters,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:2670
description: Mixed, incl. Cobalt transport protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2670_Mixed,_incl._Cobalt_transport_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2671
description: Mixed, incl. Cobalt transport protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2671_Mixed,_incl._Cobalt_transport_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2672
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2672_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2673
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2673_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2674
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2674_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2676
description: Tricarboxylic acid biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2676_Tricarboxylic_acid_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2691
description: MFS transporter superfamily, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2691_MFS_transporter_superfamily,_and_Mtb_iron_assimilation_by_chelation


id: CL:2701
description: Mixed, incl. Cobalt ion transport, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2701_Mixed,_incl._Cobalt_ion_transport,_and_ECF_transporter,_substrate-specific_component


id: CL:2703
description: Mixed, incl. Sulfur compound transport, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2703_Mixed,_incl._Sulfur_compound_transport,_and_ECF_transporter,_substrate-specific_component


id: CL:272
description: Mixed, incl. Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:272_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:2722
description: Mixed, incl. Tricarboxylic acid biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2722_Mixed,_incl._Tricarboxylic_acid_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2731
description: Mixed, incl. Type 1 protein exporter, and AAA domain, putative AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2731_Mixed,_incl._Type_1_protein_exporter,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: CL:2732
description: Mixed, incl. AAA domain, putative AbiEii toxin, Type IV TA system, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2732_Mixed,_incl._AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system,_and_Type_1_protein_exporter


id: CL:2745
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2745_Mixed,_incl._AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system,_and_Tricarboxylic_acid_biosynthetic_process

description:
  Mixed, incl. AAA domain, putative AbiEii toxin, Type IV TA system, and Tricarboxylic acid biosynthetic process


id: CL:2758
description: Mixed, incl. Tricarboxylic acid biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2758_Mixed,_incl._Tricarboxylic_acid_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2772
description: Mixed, incl. Mtb iron assimilation by chelation, and TfoX, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2772_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_TfoX,_N-terminal


id: CL:2788
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2788_Mostly_uncharacterized,_incl._Mtb_iron_assimilation_by_chelation,_and_Exodeoxyribonuclease_V_complex

description:
  Mostly uncharacterized, incl. Mtb iron assimilation by chelation, and Exodeoxyribonuclease V complex


id: CL:2789
description: Mixed, incl. Exodeoxyribonuclease V complex, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2789_Mixed,_incl._Exodeoxyribonuclease_V_complex,_and_RNA_polymerase_sigma-70_region_4


id: CL:2790
description: Mixed, incl. RNA polymerase sigma-70 region 4, and Exodeoxyribonuclease V complex
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2790_Mixed,_incl._RNA_polymerase_sigma-70_region_4,_and_Exodeoxyribonuclease_V_complex


id: CL:2791
description: Mixed, incl. Exodeoxyribonuclease V complex, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2791_Mixed,_incl._Exodeoxyribonuclease_V_complex,_and_RNA_polymerase_sigma-70_region_4


id: CL:2793
description: RNA polymerase sigma-70 region 4, and Glutamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2793_RNA_polymerase_sigma-70_region_4,_and_Glutamine_metabolic_process


id: CL:2804
description: Mixed, incl. Protein of unknown function DUF3847, and MobA/MobL protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2804_Mixed,_incl._Protein_of_unknown_function_DUF3847,_and_MobA/MobL_protein


id: CL:2814
description: Mixed, incl. YhcG, N-terminal, and MobA/MobL protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2814_Mixed,_incl._YhcG,_N-terminal,_and_MobA/MobL_protein


id: CL:2823
description: Mixed, incl. Recombinase zinc beta ribbon domain, and Bacterial dnaA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2823_Mixed,_incl._Recombinase_zinc_beta_ribbon_domain,_and_Bacterial_dnaA__protein


id: CL:2824
description: Mixed, incl. Bacterial dnaA protein, and Recombinase zinc beta ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2824_Mixed,_incl._Bacterial_dnaA__protein,_and_Recombinase_zinc_beta_ribbon_domain


id: CL:2839
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2839_Mixed,_incl._Multidrug_and_toxic_compound_extrusion_MepA-like,_and_Tricarboxylic_acid_biosynthetic_process

description:
  Mixed, incl. Multidrug and toxic compound extrusion MepA-like, and Tricarboxylic acid biosynthetic process


id: CL:2848
description: Mixed, incl. Mtb iron assimilation by chelation, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2848_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Alpha/Beta_hydrolase_fold


id: CL:2849
description: Mixed, incl. Alpha/Beta hydrolase fold, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2849_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:2852
description: Alpha/Beta hydrolase fold, and Methyltransferase TcmP-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2852_Alpha/Beta_hydrolase_fold,_and_Methyltransferase_TcmP-like


id: CL:2868
description: Mixed, incl. SpoVT-AbrB domain, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2868_Mixed,_incl._SpoVT-AbrB_domain,_and_ABC-2_family_transporter_protein


id: CL:2879
description: Multidrug and toxic compound extrusion MepA-like, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2879_Multidrug_and_toxic_compound_extrusion_MepA-like,_and_Mtb_iron_assimilation_by_chelation


id: CL:2889
description: Mixed, incl. Amino acid transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2889_Mixed,_incl._Amino_acid_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:289
description: Protein targeting, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:289_Protein_targeting,_and_Protein_carrier_chaperone


id: CL:2890
description: Mixed, incl. Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2890_Mixed,_incl._Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:2892
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2892_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:2893
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2893_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:2902
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2902_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:2923
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2923_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:2926
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2926_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:2944
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2944_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:2954
description: Mixed, incl. Tetrapyrrole metabolic process, and Heme transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2954_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Heme_transport


id: CL:2955
description: Mixed, incl. Tetrapyrrole metabolic process, and Heme transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2955_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Heme_transport


id: CL:2962
description: Tetrapyrrole methylase, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2962_Tetrapyrrole_methylase,_and_Cobalamin_metabolic_process


id: CL:2979
description: Cobalamin biosynthesis, and CobB/CobQ-like glutamine amidotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:2979_Cobalamin_biosynthesis,_and_CobB/CobQ-like_glutamine_amidotransferase


id: CL:3001
description: Mixed, incl. Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3001_Mixed,_incl._Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3004
description: Mixed, incl. FecCD transport family, and Heme transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3004_Mixed,_incl._FecCD_transport_family,_and_Heme_transport


id: CL:302
description: RNA polymerase, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:302_RNA_polymerase,_and_Sigma-70_region_3


id: CL:3021
description: Mixed, incl. MarR-type HTH domain, and Heme transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3021_Mixed,_incl._MarR-type_HTH_domain,_and_Heme_transport


id: CL:3036
description: Mixed, incl. Mtb iron assimilation by chelation, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3036_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3047
description: Mixed, incl. Secondary active transmembrane transporter activity, and SPFH domain, YdjI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3047_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_SPFH_domain,_YdjI-like


id: CL:3048
description: Mixed, incl. SPFH domain, YdjI-like, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3048_Mixed,_incl._SPFH_domain,_YdjI-like,_and_WYL_domain


id: CL:3049
description: Mixed, incl. SPFH domain, YdjI-like, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3049_Mixed,_incl._SPFH_domain,_YdjI-like,_and_mRNA_binding


id: CL:3051
description: SPFH domain, YdjI-like, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3051_SPFH_domain,_YdjI-like,_and_mRNA_binding


id: CL:3069
description: WYL domain, and Positive regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3069_WYL_domain,_and_Positive_regulation_of_molecular_function


id: CL:3081
description: Mixed, incl. Antiporter activity, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3081_Mixed,_incl._Antiporter_activity,_and_CMP_kinase_activity


id: CL:3084
description: Mixed, incl. Antiporter activity, and Pyruvate, phosphate dikinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3084_Mixed,_incl._Antiporter_activity,_and_Pyruvate,_phosphate_dikinase_activity


id: CL:3110
description: Mixed, incl. MetI-like superfamily, and Glycine reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3110_Mixed,_incl._MetI-like_superfamily,_and_Glycine_reductase_activity


id: CL:3111
description: Mixed, incl. MetI-like superfamily, and SsuA/THI5-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3111_Mixed,_incl._MetI-like_superfamily,_and_SsuA/THI5-like


id: CL:3112
description: Mixed, incl. MetI-like superfamily, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3112_Mixed,_incl._MetI-like_superfamily,_and_Polyamine_transport


id: CL:3113
description: MetI-like superfamily, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3113_MetI-like_superfamily,_and_Polyamine_transport


id: CL:3114
description: Polyamine transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3114_Polyamine_transport,_and_MetI-like_superfamily


id: CL:3116
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3116_ABC-type_polyamine_transporter_activity,_and_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing

description:
  ABC-type polyamine transporter activity, and ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing


id: CL:3137
description: Bacterial extracellular solute-binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3137_Bacterial_extracellular_solute-binding_protein,_and_TOBE_domain


id: CL:3146
description: Mixed, incl. Transmembrane protein TMEM64, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3146_Mixed,_incl._Transmembrane_protein_TMEM64,_and_Rhodanese_Homology_Domain


id: CL:3149
description: Transmembrane protein TMEM64, and Protein kinase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3149_Transmembrane_protein_TMEM64,_and_Protein_kinase-like_domain_superfamily


id: CL:3165
description: Mixed, incl. SsuA/THI5-like, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3165_Mixed,_incl._SsuA/THI5-like,_and_MetI-like_superfamily


id: CL:3167
description: Mixed, incl. SsuA/THI5-like, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3167_Mixed,_incl._SsuA/THI5-like,_and_MetI-like_superfamily


id: CL:3169
description: NMT1/THI5 like, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3169_NMT1/THI5_like,_and_MetI-like_superfamily


id: CL:3191
description: Mostly uncharacterized, incl. Copper ion binding, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3191_Mostly_uncharacterized,_incl._Copper_ion_binding,_and_Zinc-ribbon_domain


id: CL:3193
description: Mixed, incl. NMT1/THI5 like, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3193_Mixed,_incl._NMT1/THI5_like,_and_Amino_acid_transport


id: CL:3203
description: Mixed, incl. Copper ion binding, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3203_Mixed,_incl._Copper_ion_binding,_and_Zinc-ribbon_domain


id: CL:3212
description: Mixed, incl. Glycine reductase activity, and Methyltransferase, class B
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3212_Mixed,_incl._Glycine_reductase_activity,_and_Methyltransferase,_class_B


id: CL:3214
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3214_Glycine_reductase_activity,_and_Selenoprotein_B,_glycine/betaine/sarcosine/D-proline_reductase_family

description:
  Glycine reductase activity, and Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family


id: CL:3216
description: Glycine reductase activity, and Fatty acid synthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3216_Glycine_reductase_activity,_and_Fatty_acid_synthesis_protein


id: CL:3247
description: Methyltransferase, class B, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3247_Methyltransferase,_class_B,_and_Methyltransferase_domain


id: CL:3261
description: Mostly uncharacterized, incl. Threonine/Serine exporter, ThrE, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3261_Mostly_uncharacterized,_incl._Threonine/Serine_exporter,_ThrE,_and_SnoaL-like_domain


id: CL:3262
description: Mixed, incl. Threonine/Serine exporter, ThrE, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3262_Mixed,_incl._Threonine/Serine_exporter,_ThrE,_and_Toxin-antitoxin_complex


id: CL:3265
description: Mixed, incl. Acyltransferase family, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3265_Mixed,_incl._Acyltransferase_family,_and_dephospho-CoA_kinase_activity


id: CL:3281
description: Threonine/Serine exporter, ThrE, and Phenazine biosynthesis-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3281_Threonine/Serine_exporter,_ThrE,_and_Phenazine_biosynthesis-like_protein


id: CL:3296
description: Mixed, incl. SnoaL-like domain, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3296_Mixed,_incl._SnoaL-like_domain,_and_Transcription_regulator_Rrf2


id: CL:3298
description: Mixed, incl. Macro domain, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3298_Mixed,_incl._Macro_domain,_and_SnoaL-like_domain


id: CL:3312
description: Mixed, incl. SnoaL-like domain, and BCCT transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3312_Mixed,_incl._SnoaL-like_domain,_and_BCCT_transporter_family


id: CL:3324
description: Mixed, incl. Translocase, and Glycine/sarcosine/betaine reductase component B subunits
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3324_Mixed,_incl._Translocase,_and_Glycine/sarcosine/betaine_reductase_component_B_subunits


id: CL:3325
description: Mixed, incl. Translocase, and Glycine/sarcosine/betaine reductase component B subunits
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3325_Mixed,_incl._Translocase,_and_Glycine/sarcosine/betaine_reductase_component_B_subunits


id: CL:3326
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3326_Mixed,_incl._Glycine/sarcosine/betaine_reductase_component_B_subunits,_and_Glycine/sarcosine/betaine_reductase_selenoprotein_B_(GRDB)

description:
  Mixed, incl. Glycine/sarcosine/betaine reductase component B subunits, and Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)


id: CL:3328
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3328_Mixed,_incl._Glycine/sarcosine/betaine_reductase_component_B_subunits,_and_Glycine/sarcosine/betaine_reductase_selenoprotein_B_(GRDB)

description:
  Mixed, incl. Glycine/sarcosine/betaine reductase component B subunits, and Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)


id: CL:3330
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3330_Mixed,_incl._Glycine/sarcosine/betaine_reductase_component_B_subunits,_and_Glycine/sarcosine/betaine_reductase_selenoprotein_B_(GRDB)

description:
  Mixed, incl. Glycine/sarcosine/betaine reductase component B subunits, and Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)


id: CL:335
description: GTP binding domain, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:335_GTP_binding_domain,_and_Cyclophilin-like_domain_superfamily


id: CL:3362
description: Mixed, incl. Electron transport, and Proline reductase-associated electron transfer protein PrdC
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3362_Mixed,_incl._Electron_transport,_and_Proline_reductase-associated_electron_transfer_protein_PrdC


id: CL:3388
description: Mixed, incl. POT family, and Symport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3388_Mixed,_incl._POT_family,_and_Symport


id: CL:3389
description: Mixed, incl. Symport, and Branched-chain amino acid transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3389_Mixed,_incl._Symport,_and_Branched-chain_amino_acid_transport_protein


id: CL:3400
description: POT family, and Uncharacterized membrane protein YkvI
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3400_POT_family,_and_Uncharacterized_membrane_protein_YkvI


id: CL:3409
description: Mixed, incl. Winged helix DNA-binding domain superfamily, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3409_Mixed,_incl._Winged_helix_DNA-binding_domain_superfamily,_and_Peptidase_M56


id: CL:3410
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3410_Mostly_uncharacterized,_incl._Flavoprotein-like_superfamily,_and_Winged_helix_DNA-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. Flavoprotein-like superfamily, and Winged helix DNA-binding domain superfamily


id: CL:3411
description: Mostly uncharacterized, incl. GNAT domain, and Domain of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3411_Mostly_uncharacterized,_incl._GNAT_domain,_and_Domain_of_unknown_function_DUF262


id: CL:3412
description: Mixed, incl. GNAT domain, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3412_Mixed,_incl._GNAT_domain,_and_Flavoprotein-like_superfamily


id: CL:3413
description: Mixed, incl. Flavoprotein-like superfamily, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3413_Mixed,_incl._Flavoprotein-like_superfamily,_and_GNAT_domain


id: CL:3415
description: Mixed, incl. Xylan metabolic process, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3415_Mixed,_incl._Xylan_metabolic_process,_and_Acetyltransferase_(GNAT)_family


id: CL:3429
description: Mixed, incl. DUF218 domain, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3429_Mixed,_incl._DUF218_domain,_and_Toxin_metabolic_process


id: CL:3439
description: Mixed, incl. Protein of unknown function DUF1706, and Nucleophile aminohydrolases, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3439_Mixed,_incl._Protein_of_unknown_function_DUF1706,_and_Nucleophile_aminohydrolases,_N-terminal


id: CL:3453
description: Mixed, incl. Domain of unknown function DUF262, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3453_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:3455
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Biosynthesis of ansamycins
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3455_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Biosynthesis_of_ansamycins


id: CL:3471
description: Mixed, incl. Double-strand break repair, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3471_Mixed,_incl._Double-strand_break_repair,_and_Transposase_activity


id: CL:3480
description: Mixed, incl. Rhs repeat-associated core, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3480_Mixed,_incl._Rhs_repeat-associated_core,_and_NADPH-dependent_FMN_reductase


id: CL:3481
description: Mixed, incl. NADPH-dependent FMN reductase, and Transcriptional regulator PadR-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3481_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_Transcriptional_regulator_PadR-like_family


id: CL:3483
description: Mixed, incl. Positive regulation of RNA biosynthetic process, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3483_Mixed,_incl._Positive_regulation_of_RNA_biosynthetic_process,_and_Lipid_catabolic_process


id: CL:350
description: Mixed, incl. Protein carrier chaperone, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:350_Mixed,_incl._Protein_carrier_chaperone,_and_RNA_(guanine-N7)-methylation


id: CL:3504
description: Mixed, incl. Rhs repeat-associated core, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3504_Mixed,_incl._Rhs_repeat-associated_core,_and_Von_Willebrand_factor,_type_A


id: CL:3513
description: Mixed, incl. Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3513_Mixed,_incl._Peptidase_M56,_and_Penicillinase_repressor


id: CL:3515
description: Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3515_Peptidase_M56,_and_Penicillinase_repressor


id: CL:3518
description: Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3518_Peptidase_M56,_and_Penicillinase_repressor


id: CL:3520
description: Peptidase M56, and BlaI transcriptional regulatory family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3520_Peptidase_M56,_and_BlaI_transcriptional_regulatory_family


id: CL:3543
description: P-type ATPase, subfamily IB, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3543_P-type_ATPase,_subfamily_IB,_and_Heavy-metal-associated_domain


id: CL:3555
description: Mixed, incl. ABC transporter, TroCD-like, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3555_Mixed,_incl._ABC_transporter,_TroCD-like,_and_CobW/HypB/UreG,_nucleotide-binding_domain


id: CL:3559
description: ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3559_ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:3577
description: CobW/HypB/UreG, nucleotide-binding domain, and Hexose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3577_CobW/HypB/UreG,_nucleotide-binding_domain,_and_Hexose_catabolic_process


id: CL:3588
description: Mixed, incl. PdaC/RsiV-like superfamily, and Cell wall/choline-binding repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3588_Mixed,_incl._PdaC/RsiV-like_superfamily,_and_Cell_wall/choline-binding_repeat


id: CL:3601
description: Mixed, incl. Flp/Fap pilin component, and Biological process involved in symbiotic interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3601_Mixed,_incl._Flp/Fap_pilin_component,_and_Biological_process_involved_in_symbiotic_interaction


id: CL:3602
description: Mixed, incl. Flp/Fap pilin component, and Biological process involved in symbiotic interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3602_Mixed,_incl._Flp/Fap_pilin_component,_and_Biological_process_involved_in_symbiotic_interaction


id: CL:3603
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3603_Mixed,_incl._Biological_process_involved_in_symbiotic_interaction,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mixed, incl. Biological process involved in symbiotic interaction, and Type II secretion system (T2SS), protein F


id: CL:3605
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3605_Mixed,_incl._Biological_process_involved_in_symbiotic_interaction,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mixed, incl. Biological process involved in symbiotic interaction, and Type II secretion system (T2SS), protein F


id: CL:3607
description: Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3607_Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3618
description: Biological process involved in symbiotic interaction, and TadE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3618_Biological_process_involved_in_symbiotic_interaction,_and_TadE-like


id: CL:3638
description: Flp/Fap pilin component, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3638_Flp/Fap_pilin_component,_and_Cytochrome_complex_assembly


id: CL:364
description: tRNA aminoacylation, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:364_tRNA_aminoacylation,_and_PP-loop_family


id: CL:3648
description: Mixed, incl. PurE domain, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3648_Mixed,_incl._PurE_domain,_and_Nickel_cation_binding


id: CL:3661
description: Mixed, incl. DNA metabolic process, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3661_Mixed,_incl._DNA_metabolic_process,_and_Protein_secretion


id: CL:3662
description: Mixed, incl. DNA metabolic process, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3662_Mixed,_incl._DNA_metabolic_process,_and_Protein_secretion


id: CL:3663
description: Mixed, incl. DNA alkylation, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3663_Mixed,_incl._DNA_alkylation,_and_Protein_secretion


id: CL:3664
description: Mixed, incl. DNA alkylation, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3664_Mixed,_incl._DNA_alkylation,_and_Protein_secretion


id: CL:3666
description: Mixed, incl. Protein secretion, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3666_Mixed,_incl._Protein_secretion,_and_DNA_alkylation


id: CL:3667
description: Mixed, incl. Protein secretion, and PrgI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3667_Mixed,_incl._Protein_secretion,_and_PrgI_family_protein


id: CL:3668
description: Mixed, incl. Protein secretion, and PrgI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3668_Mixed,_incl._Protein_secretion,_and_PrgI_family_protein


id: CL:3669
description: Mixed, incl. Protein secretion, and PrgI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3669_Mixed,_incl._Protein_secretion,_and_PrgI_family_protein


id: CL:3670
description: Protein secretion, and Maff2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3670_Protein_secretion,_and_Maff2_family


id: CL:3672
description: TraD/TraG, TraM recognition site, and Type IV secretory system Conjugative DNA transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3672_TraD/TraG,_TraM_recognition_site,_and_Type_IV_secretory_system_Conjugative_DNA_transfer


id: CL:3684
description: Maff2 family, and TrbL/VirB6 plasmid conjugal transfer like protein, Firmicutes
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3684_Maff2_family,_and_TrbL/VirB6_plasmid_conjugal_transfer_like_protein,_Firmicutes


id: CL:3694
description: PrgI family protein, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3694_PrgI_family_protein,_and_Helicase_HerA,_central_domain


id: CL:3706
description: Mixed, incl. Maff2 family, and TrbL/VirB6 plasmid conjugal transfer like protein, Firmicutes
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3706_Mixed,_incl._Maff2_family,_and_TrbL/VirB6_plasmid_conjugal_transfer_like_protein,_Firmicutes


id: CL:371
description: Methionyl/Leucyl tRNA synthetase, and glutamyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:371_Methionyl/Leucyl_tRNA_synthetase,_and_glutamyl-tRNA_aminoacylation


id: CL:3728
description: Mixed, incl. TrbL/VirB6 plasmid conjugal transfer like protein, Firmicutes, and PrgI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3728_Mixed,_incl._TrbL/VirB6_plasmid_conjugal_transfer_like_protein,_Firmicutes,_and_PrgI_family_protein


id: CL:3741
description: Mixed, incl. DNA alkylation, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3741_Mixed,_incl._DNA_alkylation,_and_Single-strand_binding_protein_family


id: CL:3742
description: Mixed, incl. DNA restriction-modification system, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3742_Mixed,_incl._DNA_restriction-modification_system,_and_Primosome_complex


id: CL:3743
description: Mixed, incl. Primosome complex, and DNA methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3743_Mixed,_incl._Primosome_complex,_and_DNA_methylase


id: CL:3745
description: Mixed, incl. Domain of unknown function DUF6017, and Protein of unknown function DUF3801
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3745_Mixed,_incl._Domain_of_unknown_function_DUF6017,_and_Protein_of_unknown_function_DUF3801


id: CL:3761
description: Mixed, incl. DNA methylase, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3761_Mixed,_incl._DNA_methylase,_and_TraG,_P-loop_domain


id: CL:3770
description: C-5 methylation of cytosine, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3770_C-5_methylation_of_cytosine,_and_Single-strand_binding_protein_family


id: CL:3780
description: Mixed, incl. Helicase conserved C-terminal domain, and DNA topoisomerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3780_Mixed,_incl._Helicase_conserved_C-terminal_domain,_and_DNA_topoisomerase_III


id: CL:3800
description: Mixed, incl. DNA topoisomerase, type IA, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3800_Mixed,_incl._DNA_topoisomerase,_type_IA,_and_Methyltransferase_complex


id: CL:3803
description: Mixed, incl. Methyltransferase complex, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3803_Mixed,_incl._Methyltransferase_complex,_and_Single-strand_binding_protein_family


id: CL:3821
description: Mixed, incl. Protein of unknown function DUF3847, and ParB/RepB/Spo0J partition protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3821_Mixed,_incl._Protein_of_unknown_function_DUF3847,_and_ParB/RepB/Spo0J_partition_protein


id: CL:3823
description: Mixed, incl. ParB/RepB/Spo0J partition protein, and Domain of unknown function DUF6017
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3823_Mixed,_incl._ParB/RepB/Spo0J_partition_protein,_and_Domain_of_unknown_function_DUF6017


id: CL:3837
description: Mixed, incl. Protein of unknown function DUF3847, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3837_Mixed,_incl._Protein_of_unknown_function_DUF3847,_and_Transcription_regulator_PadR,_N-terminal


id: CL:3850
description: Mixed, incl. RecG, C-terminal domain superfamily, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3850_Mixed,_incl._RecG,_C-terminal_domain_superfamily,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:3852
description: Mixed, incl. RecG, C-terminal domain superfamily, and ATP-dependent chromatin remodeler activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3852_Mixed,_incl._RecG,_C-terminal_domain_superfamily,_and_ATP-dependent_chromatin_remodeler_activity


id: CL:3854
description: RecG, C-terminal domain superfamily, and DNA methylase, adenine-specific
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3854_RecG,_C-terminal_domain_superfamily,_and_DNA_methylase,_adenine-specific


id: CL:3880
description: Mixed, incl. Endonuclease relaxase, MobA/VirD2, and Bacterial mobilisation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3880_Mixed,_incl._Endonuclease_relaxase,_MobA/VirD2,_and_Bacterial_mobilisation


id: CL:3883
description: Endonuclease relaxase, MobA/VirD2, and Bacterial mobilisation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3883_Endonuclease_relaxase,_MobA/VirD2,_and_Bacterial_mobilisation


id: CL:3899
description: Mixed, incl. DDE transposase sub-family, and Transcription cis-regulatory region binding
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3899_Mixed,_incl._DDE_transposase_sub-family,_and_Transcription_cis-regulatory_region_binding


id: CL:3909
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3909_Mostly_uncharacterized,_incl._Cysteine-type_peptidase_activity,_and_(Uracil-5)-methyltransferase_family

description:
  Mostly uncharacterized, incl. Cysteine-type peptidase activity, and (Uracil-5)-methyltransferase family


id: CL:3910
description: Mixed, incl. Domain of unknown function DUF4366, and Lysozyme activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3910_Mixed,_incl._Domain_of_unknown_function_DUF4366,_and_Lysozyme_activity


id: CL:3911
description: Mostly uncharacterized, incl. EXLDI protein, and Bacterial dnaA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3911_Mostly_uncharacterized,_incl._EXLDI_protein,_and_Bacterial_dnaA__protein


id: CL:3913
description: Mixed, incl. EXLDI protein, and Bacterial dnaA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3913_Mixed,_incl._EXLDI_protein,_and_Bacterial_dnaA__protein


id: CL:3934
description: Mixed, incl. Domain of unknown function DUF4366, and Lysozyme activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3934_Mixed,_incl._Domain_of_unknown_function_DUF4366,_and_Lysozyme_activity


id: CL:3946
description: Mixed, incl. Deubiquitinase activity, and Domain of unknown function DUF6017
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3946_Mixed,_incl._Deubiquitinase_activity,_and_Domain_of_unknown_function_DUF6017


id: CL:3960
description: Mixed, incl. DNA recombination, and RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3960_Mixed,_incl._DNA_recombination,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:3961
description: Mixed, incl. DNA recombination, and RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3961_Mixed,_incl._DNA_recombination,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:3962
description: Mixed, incl. DNA recombination, and RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3962_Mixed,_incl._DNA_recombination,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:3963
description: Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3963_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Helix-turn-helix_domain


id: CL:3964
description: Mixed, incl. C-5 cytosine methyltransferase, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3964_Mixed,_incl._C-5_cytosine_methyltransferase,_and_TraG,_P-loop_domain


id: CL:3966
description: Mixed, incl. C-5 cytosine methyltransferase, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3966_Mixed,_incl._C-5_cytosine_methyltransferase,_and_TraG,_P-loop_domain


id: CL:3985
description: Mixed, incl. Helix-turn-helix domain, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:3985_Mixed,_incl._Helix-turn-helix_domain,_and_Sigma-70,_region_4


id: CL:4001
description: Mixed, incl. DNA integration, and DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4001_Mixed,_incl._DNA_integration,_and_DNA-binding_domain_superfamily


id: CL:4002
description: DNA integration, and DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4002_DNA_integration,_and_DNA-binding_domain_superfamily


id: CL:4013
description: Mixed, incl. Cell pole, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4013_Mixed,_incl._Cell_pole,_and_Amino_acid_transport


id: CL:402
description: Mixed, incl. PP-loop family, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:402_Mixed,_incl._PP-loop_family,_and_tRNA_pseudouridine_synthesis


id: CL:4029
description: Mixed, incl. Primosome complex, and TfoX, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4029_Mixed,_incl._Primosome_complex,_and_TfoX,_N-terminal


id: CL:4030
description: Mixed, incl. Phage replisome organiser, N-terminal domain, and DNA strand elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4030_Mixed,_incl._Phage_replisome_organiser,_N-terminal_domain,_and_DNA_strand_elongation


id: CL:4033
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4033_Mixed,_incl._Phage_replisome_organiser,_N-terminal_domain,_and_Bacterial_mobilisation_protein_(MobC)

description:
  Mixed, incl. Phage replisome organiser, N-terminal domain, and Bacterial mobilisation protein (MobC)


id: CL:4052
description: Mixed, incl. TfoX, N-terminal, and DNA alkylation repair enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4052_Mixed,_incl._TfoX,_N-terminal,_and_DNA_alkylation_repair_enzyme


id: CL:4064
description: Mixed, incl. FtsK domain, and NUBPL iron-transfer P-loop NTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4064_Mixed,_incl._FtsK_domain,_and_NUBPL_iron-transfer_P-loop_NTPase


id: CL:4066
description: Mixed, incl. FtsK domain, and Integrase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4066_Mixed,_incl._FtsK_domain,_and_Integrase,_catalytic_domain


id: CL:4083
description: Mixed, incl. Integrase/recombinase, N-terminal, and Virulence-associated protein E
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4083_Mixed,_incl._Integrase/recombinase,_N-terminal,_and_Virulence-associated_protein_E


id: CL:4085
description: Mixed, incl. Virulence-associated protein E, and AP2-like integrase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4085_Mixed,_incl._Virulence-associated_protein_E,_and_AP2-like_integrase,_N-terminal_domain


id: CL:4088
description: Mixed, incl. AP2-like integrase, N-terminal domain, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4088_Mixed,_incl._AP2-like_integrase,_N-terminal_domain,_and_HTH_domain


id: CL:4117
description: Mixed, incl. Macro domain, and Arsenate reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4117_Mixed,_incl._Macro_domain,_and_Arsenate_reductase-like


id: CL:4129
description: Mixed, incl. DNA strand exchange activity, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4129_Mixed,_incl._DNA_strand_exchange_activity,_and_Steroid_degradation


id: CL:4130
description: Mixed, incl. DNA strand exchange activity, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4130_Mixed,_incl._DNA_strand_exchange_activity,_and_Steroid_degradation


id: CL:4131
description: DNA strand exchange activity, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4131_DNA_strand_exchange_activity,_and_Steroid_degradation


id: CL:4133
description: Mixed, incl. Recombinase, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4133_Mixed,_incl._Recombinase,_and_Steroid_degradation


id: CL:4153
description: Mixed, incl. EXLDI protein, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4153_Mixed,_incl._EXLDI_protein,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: CL:416
description: Mixed, incl. UvrB, interaction domain, and Cellular response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:416_Mixed,_incl._UvrB,_interaction_domain,_and_Cellular_response_to_heat


id: CL:4169
description: Resolvase, N terminal domain, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4169_Resolvase,_N_terminal_domain,_and_Transposase_activity


id: CL:4190
description: CAAX-box protein maturation, and Cell wall macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4190_CAAX-box_protein_maturation,_and_Cell_wall_macromolecule_catabolic_process


id: CL:4192
description: CAAX-box protein maturation, and Domain of unknown function DUF5722
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4192_CAAX-box_protein_maturation,_and_Domain_of_unknown_function_DUF5722


id: CL:4216
description: RAMP superfamily, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4216_RAMP_superfamily,_and_GGDEF_domain


id: CL:4247
description: Mostly uncharacterized, incl. Photosynthesis - antenna proteins, and DNA methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4247_Mostly_uncharacterized,_incl._Photosynthesis_-_antenna_proteins,_and_DNA_methylase


id: CL:4248
description: Mixed, incl. Photosynthesis - antenna proteins, and DNA methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4248_Mixed,_incl._Photosynthesis_-_antenna_proteins,_and_DNA_methylase


id: CL:4250
description: Photosynthesis - antenna proteins, and SWIM zinc finger
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4250_Photosynthesis_-_antenna_proteins,_and_SWIM_zinc_finger


id: CL:4278
description: Mixed, incl. YehR-like superfamily, and BRO N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4278_Mixed,_incl._YehR-like_superfamily,_and_BRO_N-terminal_domain


id: CL:429
description: Mixed, incl. Isoprene biosynthesis, and CTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:429_Mixed,_incl._Isoprene_biosynthesis,_and_CTP_metabolic_process


id: CL:4293
description: Mixed, incl. Listeria/Bacterioides repeat, and BspA type Leucine rich repeat region
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4293_Mixed,_incl._Listeria/Bacterioides_repeat,_and_BspA_type_Leucine_rich_repeat_region


id: CL:431
description: Mixed, incl. CTP metabolic process, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:431_Mixed,_incl._CTP_metabolic_process,_and_Cytidylyltransferase_activity


id: CL:4312
description: Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4312_Transposition,_and_DNA_integration


id: CL:4313
description: Mixed, incl. Integrase, catalytic core, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4313_Mixed,_incl._Integrase,_catalytic_core,_and_Transposase


id: CL:4316
description: Mixed, incl. Transposase, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4316_Mixed,_incl._Transposase,_and_HTH-like_domain


id: CL:4317
description: Mixed, incl. Transposase, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4317_Mixed,_incl._Transposase,_and_HTH-like_domain


id: CL:4320
description: Mixed, incl. HTH-like domain, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4320_Mixed,_incl._HTH-like_domain,_and_Transposase


id: CL:4347
description: HTH-like domain, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4347_HTH-like_domain,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4365
description: Mixed, incl. Integrase, catalytic core, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4365_Mixed,_incl._Integrase,_catalytic_core,_and_Transposase


id: CL:4367
description: Integrase, catalytic core, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4367_Integrase,_catalytic_core,_and_Transposase


id: CL:4388
description: Transposition, and Integrase-like, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4388_Transposition,_and_Integrase-like,_catalytic_domain_superfamily


id: CL:4389
description: Transposition, and Integrase-like, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4389_Transposition,_and_Integrase-like,_catalytic_domain_superfamily


id: CL:4394
description: Transposase sub-family, and Transposase IS200-like
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4394_Transposase_sub-family,_and_Transposase_IS200-like


id: CL:4413
description: Integrase, SAM-like, N-terminal, and Transposase DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4413_Integrase,_SAM-like,_N-terminal,_and_Transposase_DDE_domain


id: CL:4427
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:4427_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Signal


id: CL:452
description: Mixed, incl. RNA degradation, and Radical SAM, alpha/beta horseshoe
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:452_Mixed,_incl._RNA_degradation,_and_Radical_SAM,_alpha/beta_horseshoe


id: CL:454
description: K Homology domain, type 1, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:454_K_Homology_domain,_type_1,_and_Exoribonuclease_activity


id: CL:471
description: Mixed, incl. KR domain, and RNA (C5-cytosine) methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:471_Mixed,_incl._KR_domain,_and_RNA_(C5-cytosine)_methyltransferase


id: CL:485
description: Mixed, incl. Peptidyl-glutamine methylation, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:485_Mixed,_incl._Peptidyl-glutamine_methylation,_and_RF-1_domain


id: CL:498
description: Mixed, incl. Protein folding, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:498_Mixed,_incl._Protein_folding,_and_Thioredoxin-like_superfamily


id: CL:500
description: Mixed, incl. Protein folding, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:500_Mixed,_incl._Protein_folding,_and_Thioredoxin-like_superfamily


id: CL:502
description: Protein folding, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:502_Protein_folding,_and_Thioredoxin-like_superfamily


id: CL:503
description: Stress response, and Protein folding chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:503_Stress_response,_and_Protein_folding_chaperone


id: CL:528
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:528_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_NADPH_dehydrogenase_YqjM-like

description:
  Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and NADPH dehydrogenase YqjM-like


id: CL:557
description: Mixed, incl. Adaptive Immune System, and PdaC/RsiV-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:557_Mixed,_incl._Adaptive_Immune_System,_and_PdaC/RsiV-like_superfamily


id: CL:576
description: Mixed, incl. Mismatch repair, and Topoisomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:576_Mixed,_incl._Mismatch_repair,_and_Topoisomerase


id: CL:578
description: Mismatch repair, and Excinuclease ABC activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:578_Mismatch_repair,_and_Excinuclease_ABC_activity


id: CL:580
description: Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:580_Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:582
description: Mixed, incl. UvrD/REP helicase N-terminal domain, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:582_Mixed,_incl._UvrD/REP_helicase_N-terminal_domain,_and_Mismatch_repair


id: CL:608
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:608_Mixed,_incl._DNA-directed_DNA_polymerase_activity,_and_DNA_helicase_DnaB,_N-terminal/DNA_primase_DnaG,_C-terminal

description:
  Mixed, incl. DNA-directed DNA polymerase activity, and DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal


id: CL:611
description: DNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:611_DNA-directed_DNA_polymerase_activity


id: CL:635
description: DNA topoisomerase, type IIA-like domain superfamily, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:635_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Regulation_of_DNA_replication


id: CL:656
description: PD-(D/E)XK nuclease superfamily, and RecD-like DNA helicase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:656_PD-(D/E)XK_nuclease_superfamily,_and_RecD-like_DNA_helicase


id: CL:667
description: Mixed, incl. Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:667_Mixed,_incl._Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:680
description: Mixed, incl. rRNA processing, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:680_Mixed,_incl._rRNA_processing,_and_Thiamine_metabolism


id: CL:682
description: Mixed, incl. rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:682_Mixed,_incl._rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:683
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:683_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:692
description: Mixed, incl. Pentose metabolic process, and Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:692_Mixed,_incl._Pentose_metabolic_process,_and_Protein_serine/threonine_kinase_activity


id: CL:711
description: Mixed, incl. Peptidoglycan turnover, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:711_Mixed,_incl._Peptidoglycan_turnover,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:720
description: Small molecule metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:720_Small_molecule_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:721
description: Carboxylic acid metabolic process, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:721_Carboxylic_acid_metabolic_process,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:722
description: Mixed, incl. Carbon metabolism, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:722_Mixed,_incl._Carbon_metabolism,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:723
description: Ribonucleoside monophosphate metabolic process, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:723_Ribonucleoside_monophosphate_metabolic_process,_and_Glycine,_serine_and_threonine_metabolism


id: CL:724
description: Ribonucleoside monophosphate metabolic process, and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:724_Ribonucleoside_monophosphate_metabolic_process,_and_Alpha-helical_ferredoxin


id: CL:726
description: Purine nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:726_Purine_nucleoside_monophosphate_metabolic_process


id: CL:748
description: GMP metabolic process, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:748_GMP_metabolic_process,_and_AMP_salvage


id: CL:758
description: De novo UMP biosynthetic process, and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:758_De_novo_UMP_biosynthetic_process,_and_Alpha-helical_ferredoxin


id: CL:776
description: Alpha-helical ferredoxin, and Allantoin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:776_Alpha-helical_ferredoxin,_and_Allantoin_catabolic_process


id: CL:788
description: Glycine, serine and threonine metabolism, and Lipoic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:788_Glycine,_serine_and_threonine_metabolism,_and_Lipoic_acid_metabolism


id: CL:789
description: Glycine catabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:789_Glycine_catabolic_process,_and_One-carbon_metabolism


id: CL:79
description: Mixed, incl. Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:79_Mixed,_incl._Translation,_and_RNA_metabolic_process


id: CL:80
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:80_Translation,_and_RNA_metabolic_process


id: CL:809
description: Lipoic acid metabolism, and Lipoyl
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:809_Lipoic_acid_metabolism,_and_Lipoyl


id: CL:82
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:82_Translation,_and_RNA_metabolic_process


id: CL:824
description: Mixed, incl. Fatty acid metabolism, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:824_Mixed,_incl._Fatty_acid_metabolism,_and_Citrate_cycle_(TCA_cycle)


id: CL:825
description: Mixed, incl. Butanoate metabolism, and Aerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:825_Mixed,_incl._Butanoate_metabolism,_and_Aerobic_respiration


id: CL:826
description: Citrate cycle (TCA cycle), and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:826_Citrate_cycle_(TCA_cycle),_and_Taurine_and_hypotaurine_metabolism


id: CL:83
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:83_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:831
description: Pyruvate ferredoxin/flavodoxin oxidoreductase, and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:831_Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_Thiamin_diphosphate-binding_fold


id: CL:84
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:84_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:85
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:85_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:863
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:863_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:865
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:865_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:87
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:87_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:88
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:88_Ribosome,_and_Regulation_of_translation


id: CL:886
description: Fatty acid biosynthesis, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:886_Fatty_acid_biosynthesis,_and_Fatty_acid_metabolism


id: CL:89
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:89_Ribosome,_and_Regulation_of_translation


id: CL:90
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:90_Ribosome,_and_Regulation_of_translation


id: CL:915
description: Cellular amino acid biosynthetic process, and Vitamin B6 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:915_Cellular_amino_acid_biosynthetic_process,_and_Vitamin_B6_binding


id: CL:916
description: Alpha-amino acid biosynthetic process, and Vitamin B6 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:916_Alpha-amino_acid_biosynthetic_process,_and_Vitamin_B6_binding


id: CL:917
description: Mixed, incl. Isoleucine metabolic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:917_Mixed,_incl._Isoleucine_metabolic_process,_and_Arginine_biosynthesis


id: CL:918
description: Isoleucine metabolic process, and Lysine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:918_Isoleucine_metabolic_process,_and_Lysine_metabolic_process


id: CL:919
description: Lysine metabolic process, and Threonine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:919_Lysine_metabolic_process,_and_Threonine_biosynthetic_process


id: CL:93
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:93_Ribosome,_and_Translation_regulator_activity


id: CL:944
description: Arginine biosynthesis, and Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:944_Arginine_biosynthesis,_and_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: CL:961
description: Mixed, incl. Sulfur amino acid metabolic process, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:961_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_Ribonuclease_III_domain


id: CL:963
description: Methionine metabolic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:963_Methionine_metabolic_process,_and_Transsulfuration


id: CL:966
description: Homocysteine-binding domain, and Homoserine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:966_Homocysteine-binding_domain,_and_Homoserine_metabolic_process


id: CL:97
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:97_Ribosome,_and_Translation_regulator_activity


id: CL:989
description: Cysteine biosynthetic process, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:989_Cysteine_biosynthetic_process,_and_Ribonuclease_III_domain


id: CL:99
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_679200_STRINGid_CL:99_Ribosome,_and_Translation_regulator_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_679200_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0032105
description: Negative regulation of response to extracellular stimulus
memo: https://amigo.geneontology.org/amigo/term/GO:0032105
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0032105_Negative_regulation_of_response_to_extracellular_stimulus


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_679200_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_679200_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 8
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_679200_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_679200_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045304
description: Regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045304
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0045304_Regulation_of_establishment_of_competence_for_transformation


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050485
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0050485
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0050485_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 7
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_679200_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 12
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_679200_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_679200_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2001060
description: D-glycero-D-manno-heptose 7-phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001060
golevel: 5
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:2001060_D-glycero-D-manno-heptose_7-phosphate_metabolic_process


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_679200_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005663
description: DNA replication factor C complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005663
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005663_DNA_replication_factor_C_complex


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005885
description: Arp2/3 protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005885
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005885_Arp2/3_protein_complex


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009321
description: Alkyl hydroperoxide reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009321
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009321_Alkyl_hydroperoxide_reductase_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009346
description: Citrate lyase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009346
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009346_Citrate_lyase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009505_Plant-type_cell_wall


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015629
description: Actin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015629
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0015629_Actin_cytoskeleton


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0016471
description: Vacuolar proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0016471_Vacuolar_proton-transporting_V-type_ATPase_complex


id: GOCC:0017101
description: aminoacyl-tRNA synthetase multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017101
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0017101_aminoacyl-tRNA_synthetase_multienzyme_complex


id: GOCC:0017122
description: Protein N-acetylglucosaminyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017122
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0017122_Protein_N-acetylglucosaminyltransferase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030075
description: Bacterial thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0030075
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030075_Bacterial_thylakoid


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031588
description: Nucleotide-activated protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031588_Nucleotide-activated_protein_kinase_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033176
description: Proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0033176_Proton-transporting_V-type_ATPase_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033179
description: Proton-transporting V-type ATPase, V0 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033179
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0033179_Proton-transporting_V-type_ATPase,_V0_domain


id: GOCC:0033180
description: Proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033180
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0033180_Proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0033573
description: High-affinity iron permease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0033573_High-affinity_iron_permease_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034707
description: Chloride channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034707
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0034707_Chloride_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0036125
description: Fatty acid beta-oxidation multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0036125
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0036125_Fatty_acid_beta-oxidation_multienzyme_complex


id: GOCC:0036477
description: Somatodendritic compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0036477
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0036477_Somatodendritic_compartment


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042717
description: Plasma membrane-derived chromatophore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042717
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0042717_Plasma_membrane-derived_chromatophore_membrane


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0043591
description: Endospore external encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0043591
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043591_Endospore_external_encapsulating_structure


id: GOCC:0043594
description: Outer endospore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0043594
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043594_Outer_endospore_membrane


id: GOCC:0043684
description: Type IV secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043684
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0043684_Type_IV_secretion_system_complex


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045111
description: Intermediate filament cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0045111
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045111_Intermediate_filament_cytoskeleton


id: GOCC:0045239
description: Tricarboxylic acid cycle enzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045239
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045239_Tricarboxylic_acid_cycle_enzyme_complex


id: GOCC:0045254
description: Pyruvate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045254
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045254_Pyruvate_dehydrogenase_complex


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045335
description: Phagocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0045335
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0045335_Phagocytic_vesicle


id: GOCC:0046658
description: Anchored component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0046658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0046658_Anchored_component_of_plasma_membrane


id: GOCC:0046821
description: Extrachromosomal DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0046821
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0046821_Extrachromosomal_DNA


id: GOCC:0048471
description: Perinuclear region of cytoplasm
memo: https://amigo.geneontology.org/amigo/term/GO:0048471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0048471_Perinuclear_region_of_cytoplasm


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055035
description: Plastid thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0055035
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0055035_Plastid_thylakoid_membrane


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0062023
description: Collagen-containing extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0062023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0062023_Collagen-containing_extracellular_matrix


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0072669
description: tRNA-splicing ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0072669
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0072669_tRNA-splicing_ligase_complex


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098687
description: Chromosomal region
memo: https://amigo.geneontology.org/amigo/term/GO:0098687
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098687_Chromosomal_region


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098857
description: Membrane microdomain
memo: https://amigo.geneontology.org/amigo/term/GO:0098857
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0098857_Membrane_microdomain


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099512
description: Supramolecular fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099512
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0099512_Supramolecular_fiber


id: GOCC:0099513
description: Polymeric cytoskeletal fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0099513_Polymeric_cytoskeletal_fiber


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:0120025
description: Plasma membrane bounded cell projection
memo: https://amigo.geneontology.org/amigo/term/GO:0120025
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:0120025_Plasma_membrane_bounded_cell_projection


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902503
description: Adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1902503_Adenylyltransferase_complex


id: GOCC:1902508
description: 2-iminoacetate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902508
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1902508_2-iminoacetate_synthase_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1902911
description: Protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1902911_Protein_kinase_complex


id: GOCC:1903293
description: Phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1903293
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1903293_Phosphatase_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1903600
description: Glutaminase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1903600
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1903600_Glutaminase_complex


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1905862
description: Ferroxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905862
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1905862_Ferroxidase_complex


id: GOCC:1990060
description: Maltose transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990060
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990060_Maltose_transport_complex


id: GOCC:1990065
description: Dxr protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990065
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990065_Dxr_protein_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990220
description: GroEL-GroES complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990220
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990220_GroEL-GroES_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990351_Transporter_complex


id: GOCC:1990391
description: DNA repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990391_DNA_repair_complex


id: GOCC:1990904
description: Ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990904
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_679200_STRINGid_GOCC:1990904_Ribonucleoprotein_complex


id: IPR000023
description: Phosphofructokinase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000023
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000023_Phosphofructokinase_domain


id: IPR000026
description: Guanine-specific ribonuclease N1/T1/U2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000026
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000026_Guanine-specific_ribonuclease_N1/T1/U2


id: IPR000032
description: Phosphocarrier protein HPr-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000032
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000032_Phosphocarrier_protein_HPr-like


id: IPR000053
description: Thymidine/pyrimidine-nucleoside phosphorylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000053
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000053_Thymidine/pyrimidine-nucleoside_phosphorylase


id: IPR000056
description: Ribulose-phosphate 3-epimerase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000056
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000056_Ribulose-phosphate_3-epimerase-like


id: IPR000060
description: BCCT transporter family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000060
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000060_BCCT_transporter_family


id: IPR000064
description: Endopeptidase, NLPC/P60 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000064
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000064_Endopeptidase,_NLPC/P60_domain


id: IPR000073
description: Alpha/beta hydrolase fold-1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000073
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000073_Alpha/beta_hydrolase_fold-1


id: IPR000085
description: Bacterial DNA recombination protein RuvA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000085
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000085_Bacterial_DNA_recombination_protein_RuvA


id: IPR000086
description: NUDIX hydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000086
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000086_NUDIX_hydrolase_domain


id: IPR000089
description: Biotin/lipoyl attachment
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000089
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000089_Biotin/lipoyl_attachment


id: IPR000092
description: Polyprenyl synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000092
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000092_Polyprenyl_synthetase


id: IPR000093
description: DNA recombination protein RecR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000093
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000093_DNA_recombination_protein_RecR


id: IPR000109
description: Proton-dependent oligopeptide transporter family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000109
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000109_Proton-dependent_oligopeptide_transporter_family


id: IPR000114
description: Ribosomal protein L16
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000114
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000114_Ribosomal_protein_L16


id: IPR000115
description: Phosphoribosylglycinamide synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000115
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000115_Phosphoribosylglycinamide_synthetase


id: IPR000119
description: Histone-like DNA-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000119
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000119_Histone-like_DNA-binding_protein


id: IPR000121
description: PEP-utilising enzyme, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000121
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000121_PEP-utilising_enzyme,_C-terminal


id: IPR000131
description: ATP synthase, F1 complex, gamma subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000131
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000131_ATP_synthase,_F1_complex,_gamma_subunit


id: IPR000157
description: Toll/interleukin-1 receptor homology (TIR) domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000157
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000157_Toll/interleukin-1_receptor_homology_(TIR)_domain


id: IPR000158
description: Cell division protein FtsZ
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000158
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000158_Cell_division_protein_FtsZ


id: IPR000178
description: Translation initiation factor IF-2, bacterial-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000178
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000178_Translation_initiation_factor_IF-2,_bacterial-like


id: IPR000185
description: Protein translocase subunit SecA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000185
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000185_Protein_translocase_subunit_SecA


id: IPR000192
description: Aminotransferase class V domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000192
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000192_Aminotransferase_class_V_domain


id: IPR000194
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000194
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000194_ATPase,_F1/V1/A1_complex,_alpha/beta_subunit,_nucleotide-binding_domain


id: IPR000206
description: Ribosomal protein L7/L12
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000206
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000206_Ribosomal_protein_L7/L12


id: IPR000209
description: Peptidase S8/S53 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000209
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000209_Peptidase_S8/S53_domain


id: IPR000212
description: DNA helicase, UvrD/REP type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000212
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000212_DNA_helicase,_UvrD/REP_type


id: IPR000218
description: Ribosomal protein L14P
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000218
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000218_Ribosomal_protein_L14P


id: IPR000223
description: Peptidase S26A, signal peptidase I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000223
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000223_Peptidase_S26A,_signal_peptidase_I


id: IPR000235
description: Ribosomal protein S5/S7
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000235
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000235_Ribosomal_protein_S5/S7


id: IPR000238
description: Ribosome-binding factor A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000238
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000238_Ribosome-binding_factor_A


id: IPR000241
description: Ribosomal RNA large subunit methyltransferase K/L-like, FLD domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000241
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000241_Ribosomal_RNA_large_subunit_methyltransferase_K/L-like,_FLD_domain


id: IPR000253
description: Forkhead-associated (FHA) domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000253
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000253_Forkhead-associated_(FHA)_domain


id: IPR000266
description: Ribosomal protein S17/S11
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000266
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000266_Ribosomal_protein_S17/S11


id: IPR000271
description: Ribosomal protein L34
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000271
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000271_Ribosomal_protein_L34


id: IPR000277
description: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000277
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000277_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme


id: IPR000291
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000291
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000291_D-alanine--D-alanine_ligase/VANA/B/C,_conserved_site


id: IPR000292
description: Formate/nitrite transporter
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000292
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000292_Formate/nitrite_transporter


id: IPR000297
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000297
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000297_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type


id: IPR000304
description: Pyrroline-5-carboxylate reductase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000304
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000304_Pyrroline-5-carboxylate_reductase


id: IPR000307
description: Ribosomal protein S16
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000307
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000307_Ribosomal_protein_S16


id: IPR000310
description: Orn/Lys/Arg decarboxylase, major domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000310
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000310_Orn/Lys/Arg_decarboxylase,_major_domain


id: IPR000312
description: Glycosyl transferase, family 3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000312
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000312_Glycosyl_transferase,_family_3


id: IPR000319
description: Aspartate-semialdehyde dehydrogenase, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000319
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000319_Aspartate-semialdehyde_dehydrogenase,_conserved_site


id: IPR000352
description: Peptide chain release factor class I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000352
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000352_Peptide_chain_release_factor_class_I


id: IPR000362
description: Fumarate lyase family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000362
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000362_Fumarate_lyase_family


id: IPR000374
description: Phosphatidate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000374
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000374_Phosphatidate_cytidylyltransferase


id: IPR000380
description: DNA topoisomerase, type IA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000380
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000380_DNA_topoisomerase,_type_IA


id: IPR000397
description: Heat shock protein Hsp33
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000397
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000397_Heat_shock_protein_Hsp33


id: IPR000399
description: TPP-binding enzyme, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000399
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000399_TPP-binding_enzyme,_conserved_site


id: IPR000417
description: Hydroxyethylthiazole kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000417
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000417_Hydroxyethylthiazole_kinase


id: IPR000422
description: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000422
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000422_3,4-dihydroxy-2-butanone_4-phosphate_synthase,_RibB


id: IPR000424
description: Primosome PriB/single-strand DNA-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000424
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000424_Primosome_PriB/single-strand_DNA-binding


id: IPR000432
description: DNA mismatch repair protein MutS, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000432
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000432_DNA_mismatch_repair_protein_MutS,_C-terminal


id: IPR000438
description: Acetyl-CoA carboxylase carboxyl transferase, beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000438
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000438_Acetyl-CoA_carboxylase_carboxyl_transferase,_beta_subunit


id: IPR000445
description: Helix-hairpin-helix motif
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000445
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000445_Helix-hairpin-helix_motif


id: IPR000454
description: ATP synthase, F0 complex, subunit C
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000454
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000454_ATP_synthase,_F0_complex,_subunit_C


id: IPR000456
description: Ribosomal protein L17
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000456
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000456_Ribosomal_protein_L17


id: IPR000462
description: CDP-alcohol phosphatidyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000462
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000462_CDP-alcohol_phosphatidyltransferase


id: IPR000477
description: Reverse transcriptase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000477
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000477_Reverse_transcriptase_domain


id: IPR000489
description: Pterin-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000489
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000489_Pterin-binding_domain


id: IPR000506
description: Ketol-acid reductoisomerase, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000506
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000506_Ketol-acid_reductoisomerase,_C-terminal


id: IPR000515
description: ABC transporter type 1, transmembrane domain MetI-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000515
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000515_ABC_transporter_type_1,_transmembrane_domain_MetI-like


id: IPR000522
description: ABC transporter, permease protein, BtuC-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000522
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000522_ABC_transporter,_permease_protein,_BtuC-like


id: IPR000523
description: Magnesium chelatase ChlI-like, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000523
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000523_Magnesium_chelatase_ChlI-like,_catalytic_domain


id: IPR000524
description: Transcription regulator HTH, GntR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000524
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000524_Transcription_regulator_HTH,_GntR


id: IPR000525
description: Initiator Rep protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000525
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000525_Initiator_Rep_protein


id: IPR000534
description: Semialdehyde dehydrogenase, NAD-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000534
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000534_Semialdehyde_dehydrogenase,_NAD-binding


id: IPR000559
description: Formate-tetrahydrofolate ligase, FTHFS
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000559
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000559_Formate-tetrahydrofolate_ligase,_FTHFS


id: IPR000565
description: DNA topoisomerase, type IIA, subunit B
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000565
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000565_DNA_topoisomerase,_type_IIA,_subunit_B


id: IPR000568
description: ATP synthase, F0 complex, subunit A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000568
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000568_ATP_synthase,_F0_complex,_subunit_A


id: IPR000573
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000573
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000573_Aconitase_A/isopropylmalate_dehydratase_small_subunit,_swivel_domain


id: IPR000577
description: Carbohydrate kinase, FGGY
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000577
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000577_Carbohydrate_kinase,_FGGY


id: IPR000581
description: Dihydroxy-acid/6-phosphogluconate dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000581
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000581_Dihydroxy-acid/6-phosphogluconate_dehydratase


id: IPR000587
description: Creatinase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000587
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000587_Creatinase,_N-terminal


id: IPR000589
description: Ribosomal protein S15
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000589
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000589_Ribosomal_protein_S15


id: IPR000594
description: THIF-type NAD/FAD binding fold
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000594
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000594_THIF-type_NAD/FAD_binding_fold


id: IPR000595
description: Cyclic nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000595
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000595_Cyclic_nucleotide-binding_domain


id: IPR000623
description: Shikimate kinase/Threonine synthase-like 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000623
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000623_Shikimate_kinase/Threonine_synthase-like_1


id: IPR000631
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000631
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000631_ATP/ADP-dependent_(S)-NAD(P)H-hydrate_dehydratase


id: IPR000640
description: Elongation factor EFG, domain V-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000640
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000640_Elongation_factor_EFG,_domain_V-like


id: IPR000652
description: Triosephosphate isomerase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000652
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000652_Triosephosphate_isomerase


id: IPR000653
description: DegT/DnrJ/EryC1/StrS aminotransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000653
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000653_DegT/DnrJ/EryC1/StrS_aminotransferase


id: IPR000672
description: Tetrahydrofolate dehydrogenase/cyclohydrolase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000672
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000672_Tetrahydrofolate_dehydrogenase/cyclohydrolase


id: IPR000709
description: Leu/Ile/Val-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000709
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000709_Leu/Ile/Val-binding_protein


id: IPR000711
description: ATPase, OSCP/delta subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000711
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000711_ATPase,_OSCP/delta_subunit


id: IPR000713
description: Mur ligase, N-terminal catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000713
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000713_Mur_ligase,_N-terminal_catalytic_domain


id: IPR000715
description: Glycosyl transferase, family 4
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000715
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000715_Glycosyl_transferase,_family_4


id: IPR000719
description: Protein kinase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000719
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000719_Protein_kinase_domain


id: IPR000722
description: RNA polymerase, alpha subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000722
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000722_RNA_polymerase,_alpha_subunit


id: IPR000740
description: GrpE nucleotide exchange factor
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000740
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000740_GrpE_nucleotide_exchange_factor


id: IPR000741
description: Fructose-bisphosphate aldolase, class-I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000741
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000741_Fructose-bisphosphate_aldolase,_class-I


id: IPR000748
description: Pseudouridine synthase, RsuA/RluB/E/F
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000748
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000748_Pseudouridine_synthase,_RsuA/RluB/E/F


id: IPR000749
description: ATP:guanido phosphotransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000749
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000749_ATP:guanido_phosphotransferase


id: IPR000792
description: Transcription regulator LuxR, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000792
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000792_Transcription_regulator_LuxR,_C-terminal


id: IPR000793
description: ATP synthase, alpha subunit, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000793
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000793_ATP_synthase,_alpha_subunit,_C-terminal


id: IPR000794
description: Beta-ketoacyl synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000794
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000794_Beta-ketoacyl_synthase


id: IPR000795
description: Translational (tr)-type GTP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000795
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000795_Translational_(tr)-type_GTP-binding_domain


id: IPR000811
description: Glycosyl transferase, family 35
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000811
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000811_Glycosyl_transferase,_family_35


id: IPR000825
description: SUF system FeS cluster assembly, SufBD
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000825
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000825_SUF_system_FeS_cluster_assembly,_SufBD


id: IPR000836
description: Phosphoribosyltransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000836
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000836_Phosphoribosyltransferase_domain


id: IPR000845
description: Nucleoside phosphorylase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000845
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000845_Nucleoside_phosphorylase_domain


id: IPR000846
description: Dihydrodipicolinate reductase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000846
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000846_Dihydrodipicolinate_reductase,_N-terminal


id: IPR000847
description: Transcription regulator HTH, LysR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000847
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000847_Transcription_regulator_HTH,_LysR


id: IPR000850
description: Adenylate kinase/UMP-CMP kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000850
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000850_Adenylate_kinase/UMP-CMP_kinase


id: IPR000860
description: Porphobilinogen deaminase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000860
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000860_Porphobilinogen_deaminase


id: IPR000866
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000866
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000866_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant


id: IPR000873
description: AMP-dependent synthetase/ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000873
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000873_AMP-dependent_synthetase/ligase_domain


id: IPR000878
description: Tetrapyrrole methylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000878
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000878_Tetrapyrrole_methylase


id: IPR000888
description: dTDP-4-dehydrorhamnose 3,5-epimerase-related
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000888
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000888_dTDP-4-dehydrorhamnose_3,5-epimerase-related


id: IPR000890
description: Aliphatic acid kinase, short-chain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000890
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000890_Aliphatic_acid_kinase,_short-chain


id: IPR000897
description: Signal recognition particle, SRP54 subunit, GTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000897
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000897_Signal_recognition_particle,_SRP54_subunit,_GTPase_domain


id: IPR000911
description: Ribosomal protein L11/L12
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000911
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000911_Ribosomal_protein_L11/L12


id: IPR000914
description: Solute-binding protein family 5 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000914
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000914_Solute-binding_protein_family_5_domain


id: IPR000924
description: Glutamyl/glutaminyl-tRNA synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000924
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000924_Glutamyl/glutaminyl-tRNA_synthetase


id: IPR000926
description: GTP cyclohydrolase II, RibA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000926
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000926_GTP_cyclohydrolase_II,_RibA


id: IPR000943
description: RNA polymerase sigma-70
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000943
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000943_RNA_polymerase_sigma-70


id: IPR000944
description: Transcription regulator Rrf2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000944
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000944_Transcription_regulator_Rrf2


id: IPR000979
description: Phosphodiesterase MJ0936/Vps29
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000979
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000979_Phosphodiesterase_MJ0936/Vps29


id: IPR000999
description: Ribonuclease III domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000999
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR000999_Ribonuclease_III_domain


id: IPR001001
description: DNA polymerase III, beta sliding clamp
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001001
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001001_DNA_polymerase_III,_beta_sliding_clamp


id: IPR001014
description: Ribosomal protein L23/L25, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001014
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001014_Ribosomal_protein_L23/L25,_conserved_site


id: IPR001030
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001030
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001030_Aconitase/3-isopropylmalate_dehydratase_large_subunit,_alpha/beta/alpha_domain


id: IPR001041
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001041
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001041_2Fe-2S_ferredoxin-type_iron-sulfur_binding_domain


id: IPR001048
description: Aspartate/glutamate/uridylate kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001048
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001048_Aspartate/glutamate/uridylate_kinase


id: IPR001059
description: Translation elongation factor P/YeiP, central
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001059
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001059_Translation_elongation_factor_P/YeiP,_central


id: IPR001062
description: Transcription antitermination protein, NusG
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001062
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001062_Transcription_antitermination_protein,_NusG


id: IPR001063
description: Ribosomal protein L22/L17
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001063
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001063_Ribosomal_protein_L22/L17


id: IPR001077
description: O-methyltransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001077
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001077_O-methyltransferase_domain


id: IPR001085
description: Serine hydroxymethyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001085
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001085_Serine_hydroxymethyltransferase


id: IPR001091
description: Restriction/modification DNA-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001091
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001091_Restriction/modification_DNA-methyltransferase


id: IPR001093
description: IMP dehydrogenase/GMP reductase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001093
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001093_IMP_dehydrogenase/GMP_reductase


id: IPR001095
description: Acetyl-CoA carboxylase, alpha subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001095
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001095_Acetyl-CoA_carboxylase,_alpha_subunit


id: IPR001098
description: DNA-directed DNA polymerase, family A, palm domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001098
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001098_DNA-directed_DNA_polymerase,_family_A,_palm_domain


id: IPR001100
description: Pyridine nucleotide-disulphide oxidoreductase, class I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001100
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001100_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I


id: IPR001114
description: Adenylosuccinate synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001114
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001114_Adenylosuccinate_synthetase


id: IPR001119
description: S-layer homology domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001119
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001119_S-layer_homology_domain


id: IPR001127
description: Phosphotransferase system, sugar-specific permease EIIA type 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001127
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001127_Phosphotransferase_system,_sugar-specific_permease_EIIA_type_1


id: IPR001130
description: 3-5 ssDNA/RNA exonuclease TatD-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001130
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001130_3-5_ssDNA/RNA_exonuclease_TatD-like


id: IPR001150
description: Glycine radical domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001150
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001150_Glycine_radical_domain


id: IPR001155
description: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001155
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001155_NADH:flavin_oxidoreductase/NADH_oxidase,_N-terminal


id: IPR001162
description: UvrC, RNAse H endonuclease domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001162
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001162_UvrC,_RNAse_H_endonuclease_domain


id: IPR001173
description: Glycosyltransferase 2-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001173
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001173_Glycosyltransferase_2-like


id: IPR001174
description: Galactokinase/homoserine kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001174
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001174_Galactokinase/homoserine_kinase


id: IPR001179
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001179
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001179_FKBP-type_peptidyl-prolyl_cis-trans_isomerase_domain


id: IPR001182
description: Probable peptidoglycan glycosyltransferase FtsW/RodA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001182
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001182_Probable_peptidoglycan_glycosyltransferase_FtsW/RodA


id: IPR001185
description: Large-conductance mechanosensitive channel
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001185
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001185_Large-conductance_mechanosensitive_channel


id: IPR001188
description: Spermidine/putrescine-binding periplasmic protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001188
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001188_Spermidine/putrescine-binding_periplasmic_protein


id: IPR001189
description: Manganese/iron superoxide dismutase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001189
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001189_Manganese/iron_superoxide_dismutase


id: IPR001196
description: Ribosomal protein L15, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001196
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001196_Ribosomal_protein_L15,_conserved_site


id: IPR001206
description: Diacylglycerol kinase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001206
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001206_Diacylglycerol_kinase,_catalytic_domain


id: IPR001209
description: Ribosomal protein S14
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001209
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001209_Ribosomal_protein_S14


id: IPR001216
description: Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001216
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001216_Cysteine_synthase/cystathionine_beta-synthase,_pyridoxal-phosphate_attachment_site


id: IPR001223
description: Glycoside hydrolase family 18, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001223
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001223_Glycoside_hydrolase_family_18,_catalytic_domain


id: IPR001226
description: Flavodoxin, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001226
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001226_Flavodoxin,_conserved_site


id: IPR001227
description: Acyl transferase domain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001227
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001227_Acyl_transferase_domain_superfamily


id: IPR001228
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001228
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001228_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase


id: IPR001233
description: RNA-splicing ligase, RtcB
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001233
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001233_RNA-splicing_ligase,_RtcB


id: IPR001241
description: DNA topoisomerase, type IIA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001241
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001241_DNA_topoisomerase,_type_IIA


id: IPR001247
description: Exoribonuclease, phosphorolytic domain 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001247
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001247_Exoribonuclease,_phosphorolytic_domain_1


id: IPR001249
description: Acetyl-CoA biotin carboxyl carrier
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001249
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001249_Acetyl-CoA_biotin_carboxyl_carrier


id: IPR001250
description: Mannose-6-phosphate isomerase, type I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001250
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001250_Mannose-6-phosphate_isomerase,_type_I


id: IPR001261
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001261
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001261_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: IPR001264
description: Glycosyl transferase, family 51
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001264
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001264_Glycosyl_transferase,_family_51


id: IPR001269
description: tRNA-dihydrouridine synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001269
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001269_tRNA-dihydrouridine_synthase


id: IPR001272
description: Phosphoenolpyruvate carboxykinase, ATP-utilising
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001272
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001272_Phosphoenolpyruvate_carboxykinase,_ATP-utilising


id: IPR001279
description: Metallo-beta-lactamase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001279
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001279_Metallo-beta-lactamase


id: IPR001288
description: Translation initiation factor 3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001288
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001288_Translation_initiation_factor_3


id: IPR001295
description: Dihydroorotate dehydrogenase, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001295
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001295_Dihydroorotate_dehydrogenase,_conserved_site


id: IPR001296
description: Glycosyl transferase, family 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001296
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001296_Glycosyl_transferase,_family_1


id: IPR001305
description: Heat shock protein DnaJ, cysteine-rich domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001305
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001305_Heat_shock_protein_DnaJ,_cysteine-rich_domain


id: IPR001308
description: Electron transfer flavoprotein alpha subunit/FixB
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001308
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001308_Electron_transfer_flavoprotein_alpha_subunit/FixB


id: IPR001310
description: Histidine triad (HIT) protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001310
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001310_Histidine_triad_(HIT)_protein


id: IPR001320
description: Ionotropic glutamate receptor, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001320
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001320_Ionotropic_glutamate_receptor,_C-terminal


id: IPR001328
description: Peptidyl-tRNA hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001328
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001328_Peptidyl-tRNA_hydrolase


id: IPR001342
description: Homoserine dehydrogenase, catalytic
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001342
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001342_Homoserine_dehydrogenase,_catalytic


id: IPR001345
description: Phosphoglycerate/bisphosphoglycerate mutase, active site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001345
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001345_Phosphoglycerate/bisphosphoglycerate_mutase,_active_site


id: IPR001351
description: Ribosomal protein S3, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001351
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001351_Ribosomal_protein_S3,_C-terminal


id: IPR001352
description: Ribonuclease HII/HIII
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001352
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001352_Ribonuclease_HII/HIII


id: IPR001362
description: Glycoside hydrolase, family 32
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001362
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001362_Glycoside_hydrolase,_family_32


id: IPR001367
description: Iron dependent repressor, metal binding and dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001367
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001367_Iron_dependent_repressor,_metal_binding_and_dimerisation_domain


id: IPR001383
description: Ribosomal protein L28
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001383
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001383_Ribosomal_protein_L28


id: IPR001387
description: Cro/C1-type helix-turn-helix domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001387
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001387_Cro/C1-type_helix-turn-helix_domain


id: IPR001404
description: Heat shock protein Hsp90 family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001404
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001404_Heat_shock_protein_Hsp90_family


id: IPR001405
description: Uncharacterised protein family UPF0758
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001405
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001405_Uncharacterised_protein_family_UPF0758


id: IPR001406
description: Pseudouridine synthase I, TruA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001406
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001406_Pseudouridine_synthase_I,_TruA


id: IPR001412
description: Aminoacyl-tRNA synthetase, class I, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001412
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001412_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site


id: IPR001433
description: Oxidoreductase FAD/NAD(P)-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001433
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001433_Oxidoreductase_FAD/NAD(P)-binding


id: IPR001434
description: Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001434
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001434_Large_cysteine-rich_periplasmic_protein_OmcB-like,_DUF11_domain


id: IPR001437
description: Transcription elongation factor, GreA/GreB, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001437
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001437_Transcription_elongation_factor,_GreA/GreB,_C-terminal


id: IPR001441
description: Decaprenyl diphosphate synthase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001441
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001441_Decaprenyl_diphosphate_synthase-like


id: IPR001460
description: Penicillin-binding protein, transpeptidase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001460
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001460_Penicillin-binding_protein,_transpeptidase


id: IPR001463
description: Sodium:alanine symporter
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001463
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001463_Sodium:alanine_symporter


id: IPR001466
description: Beta-lactamase-related
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001466
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001466_Beta-lactamase-related


id: IPR001469
description: ATP synthase, F1 complex, delta/epsilon subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001469
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001469_ATP_synthase,_F1_complex,_delta/epsilon_subunit


id: IPR001482
description: Type II/IV secretion system protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001482
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001482_Type_II/IV_secretion_system_protein


id: IPR001497
description: Methylated-DNA-[protein]-cysteine S-methyltransferase, active site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001497
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001497_Methylated-DNA-[protein]-cysteine_S-methyltransferase,_active_site


id: IPR001509
description: NAD-dependent epimerase/dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001509
name:
  Protein Domains and Features (InterPro).STRING_v12.0_679200_STRINGid_IPR001509_NAD-dependent_epimerase/dehydratase


