# geneInfo

ensembl_gene_id: RN98_00005
symbol: ALF18836.1
gene_biotype: protein_coding
description:
  Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00010
symbol: hppA
gene_biotype: protein_coding
description:
  Potassium transporter; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: RN98_00015
symbol: ALF16685.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00020
symbol: apbE
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: RN98_00025
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: RN98_00035
symbol: ALF16689.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00040
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RN98_00050
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: RN98_00055
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00060
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: RN98_00065
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: RN98_00070
symbol: nusG
gene_biotype: protein_coding
description:
  Antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: RN98_00075
symbol: ALF16697.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: RN98_00085
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: RN98_00090
symbol: fur
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: RN98_00095
symbol: ALF16700.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00100
symbol: dctP
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: RN98_00105
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.


ensembl_gene_id: RN98_00115
symbol: nagD
gene_biotype: protein_coding
description:
  4-nitrophenylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00135
symbol: ALF16706.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: RN98_00140
symbol: exoA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00145
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: RN98_00150
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: RN98_00155
symbol: ALF16710.1
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00165
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: RN98_00170
symbol: ALF16713.1
gene_biotype: protein_coding
description:
  asparaginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00180
symbol: rnmV
gene_biotype: protein_coding
description:
  DNA primase; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: RN98_00240
symbol: ALF16724.1
gene_biotype: protein_coding
description:
  Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00245
symbol: ALF16725.1
gene_biotype: protein_coding
description:
  tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00250
symbol: ALF16726.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00260
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: RN98_00270
symbol: ALF16730.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00275
symbol: ALF16731.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00280
symbol: ALF16732.1
gene_biotype: protein_coding
description:
  9-O-acetyl-N-acetylneuraminate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00285
symbol: gspD
gene_biotype: protein_coding
description:
  General secretion pathway protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.


ensembl_gene_id: RN98_00295
symbol: ALF16735.1
gene_biotype: protein_coding
description:
  Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00305
symbol: ALF16737.1
gene_biotype: protein_coding
description:
  N-terminal cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00320
symbol: gspG
gene_biotype: protein_coding
description:
  General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00325
symbol: gspF
gene_biotype: protein_coding
description:
  General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00330
symbol: pilB
gene_biotype: protein_coding
description:
  General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00350
symbol: mrp
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: RN98_00370
symbol: ALF16749.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00375
symbol: ALF16750.1
gene_biotype: protein_coding
description:
  Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00385
symbol: ALF16752.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00410
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: RN98_00420
symbol: galT
gene_biotype: protein_coding
description:
  Galactose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00425
symbol: galE
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: RN98_00460
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: RN98_00465
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit alpha; Catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: RN98_00470
symbol: ALF16764.1
gene_biotype: protein_coding
description:
  Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00475
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00480
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RN98_00490
symbol: recF
gene_biotype: protein_coding
description:
  Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: RN98_00495
symbol: ALF16769.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00500
symbol: ALF16770.1
gene_biotype: protein_coding
description:
  Chromosomal replication initiator DnaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00505
symbol: ALF16771.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00510
symbol: ALF16772.1
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00515
symbol: ALF16773.1
gene_biotype: protein_coding
description:
  Membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: RN98_00525
symbol: ALF16775.1
gene_biotype: protein_coding
description:
  Jag protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00530
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: RN98_00535
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: RN98_00540
symbol: nadA2
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: RN98_00545
symbol: nadB
gene_biotype: protein_coding
description:
  L-aspartate oxidase; Catalyzes the formation of oxaloacetate from L-aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00550
symbol: nadC
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: RN98_00555
symbol: ALF16780.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00560
symbol: flaR
gene_biotype: protein_coding
description:
  DNA topology modulation protein FlaR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00585
symbol: ALF16786.1
gene_biotype: protein_coding
description:
  Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00590
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RN98_00595
symbol: ALF16788.1
gene_biotype: protein_coding
description:
  Heat-shock protein Hsp15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00600
symbol: ALF16789.1
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00615
symbol: ALF16791.1
gene_biotype: protein_coding
description:
  Toxin HicA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00625
symbol: ALF16793.1
gene_biotype: protein_coding
description:
  Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00630
symbol: nhaC
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00635
symbol: ALF16795.1
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00640
symbol: ALF16796.1
gene_biotype: protein_coding
description:
  Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00650
symbol: cobQ2
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: RN98_00655
symbol: ALF16799.1
gene_biotype: protein_coding
description:
  Amino acid carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00660
symbol: ALF16800.1
gene_biotype: protein_coding
description:
  dGTP triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00665
symbol: tlpA
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00675
symbol: ALF16803.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00685
symbol: ALF16805.1
gene_biotype: protein_coding
description:
  Adhesion protein FadA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00715
symbol: ALF16809.1
gene_biotype: protein_coding
description:
  Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00720
symbol: ALF16810.1
gene_biotype: protein_coding
description:
  ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: RN98_00725
symbol: ALF16811.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00730
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: RN98_00735
symbol: ALF16813.1
gene_biotype: protein_coding
description:
  Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00745
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: RN98_00750
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.


ensembl_gene_id: RN98_00755
symbol: iscU
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00760
symbol: ALF16818.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: RN98_00765
symbol: ALF16819.1
gene_biotype: protein_coding
description:
  Peptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: RN98_00785
symbol: ALF16823.1
gene_biotype: protein_coding
description:
  Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00820
symbol: ALF16826.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00825
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: RN98_00830
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: RN98_00835
symbol: glyQ
gene_biotype: protein_coding
description:
  glycine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00840
symbol: glyS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00845
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00850
symbol: sulD
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: RN98_00855
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: RN98_00860
symbol: pduU
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00865
symbol: eutP
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutP/PduV family.


ensembl_gene_id: RN98_00870
symbol: ALF16836.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00875
symbol: adh
gene_biotype: protein_coding
description:
  Butanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00885
symbol: trx
gene_biotype: protein_coding
description:
  Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: RN98_00890
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: RN98_00910
symbol: ALF16840.1
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00920
symbol: ALF16842.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00925
symbol: ALF16843.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00930
symbol: nrdB
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: RN98_00950
symbol: ALF16846.1
gene_biotype: protein_coding
description:
  Antitoxin HicB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00955
symbol: ALF16847.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00960
symbol: ALF16848.1
gene_biotype: protein_coding
description:
  Flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00965
symbol: ALF16849.1
gene_biotype: protein_coding
description:
  Chaperone protein HchA; Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00970
symbol: ALF16850.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00975
symbol: ALF16851.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00980
symbol: ALF16852.1
gene_biotype: protein_coding
description:
  Cyclohexadienyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_00985
symbol: putP2
gene_biotype: protein_coding
description:
  Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RN98_00995
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: RN98_01020
symbol: hrcA
gene_biotype: protein_coding
description:
  HrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: RN98_01025
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: RN98_01035
symbol: ogt
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01040
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: RN98_01070
symbol: ALF16865.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01075
symbol: ALF16866.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01085
symbol: ALF16868.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01095
symbol: ALF16870.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: RN98_01105
symbol: ALF16872.1
gene_biotype: protein_coding
description:
  Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01110
symbol: mntB
gene_biotype: protein_coding
description:
  Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01115
symbol: ALF16874.1
gene_biotype: protein_coding
description:
  Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01125
symbol: ALF16876.1
gene_biotype: protein_coding
description:
  Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01140
symbol: pepD
gene_biotype: protein_coding
description:
  Aminoacyl-histidine dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01145
symbol: ALF16880.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01150
symbol: gltS3
gene_biotype: protein_coding
description:
  Sodium:glutamate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01155
symbol: ALF16882.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: RN98_01160
symbol: potC
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01170
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RN98_01180
symbol: ALF16887.1
gene_biotype: protein_coding
description:
  PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01185
symbol: fryA
gene_biotype: protein_coding
description:
  Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01195
symbol: ALF16890.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01200
symbol: cobO
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01205
symbol: ALF18847.1
gene_biotype: protein_coding
description:
  MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01210
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: RN98_01215
symbol: rfaE
gene_biotype: protein_coding
description:
  ADP-heptose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01230
symbol: eutJ
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01235
symbol: ptsH
gene_biotype: protein_coding
description:
  Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01240
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: RN98_01280
symbol: pyk
gene_biotype: protein_coding
description:
  Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01285
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: RN98_01310
symbol: ALF16904.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01315
symbol: ALF16905.1
gene_biotype: protein_coding
description:
  Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01320
symbol: ALF16906.1
gene_biotype: protein_coding
description:
  Cysteine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01325
symbol: ALF16907.1
gene_biotype: protein_coding
description:
  Sodium-dependent tryptophan transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01330
symbol: ALF16908.1
gene_biotype: protein_coding
description:
  Tryptophanase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01345
symbol: ALF16911.1
gene_biotype: protein_coding
description:
  Membrane-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01350
symbol: ALF16912.1
gene_biotype: protein_coding
description:
  RelB/DinJ family addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01355
symbol: clpB
gene_biotype: protein_coding
description:
  Clp protease ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RN98_01365
symbol: ALF16915.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: RN98_01380
symbol: sua
gene_biotype: protein_coding
description:
  Translation factor Sua5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: RN98_01385
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: RN98_01390
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: RN98_01400
symbol: ubiD
gene_biotype: protein_coding
description:
  UbiD family decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01415
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: RN98_01425
symbol: ALF16927.1
gene_biotype: protein_coding
description:
  Prevent-host-death protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01430
symbol: ALF16928.1
gene_biotype: protein_coding
description:
  Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01440
symbol: truA
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: RN98_01445
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01450
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: RN98_01455
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: RN98_01460
symbol: rnfG
gene_biotype: protein_coding
description:
  Nitrogen fixation protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: RN98_01465
symbol: rnfE
gene_biotype: protein_coding
description:
  RnfABCDGE type electron transport complex subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: RN98_01470
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transporter RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: RN98_01475
symbol: ALF16937.1
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01490
symbol: ALF16938.1
gene_biotype: protein_coding
description:
  LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01495
symbol: catB
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01505
symbol: ALF16941.1
gene_biotype: protein_coding
description:
  Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01520
symbol: ALF16943.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01530
symbol: ALF16945.1
gene_biotype: protein_coding
description:
  dUTP diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01540
symbol: ALF16946.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01615
symbol: ALF18852.1
gene_biotype: protein_coding
description:
  DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01665
symbol: ALF16961.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01680
symbol: ALF16963.1
gene_biotype: protein_coding
description:
  Polyphosphate glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01695
symbol: ALF16966.1
gene_biotype: protein_coding
description:
  Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01740
symbol: ALF16974.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01750
symbol: ALF16976.1
gene_biotype: protein_coding
description:
  Antirepressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01755
symbol: ALF16977.1
gene_biotype: protein_coding
description:
  Phage tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01760
symbol: ALF16978.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01780
symbol: ALF16982.1
gene_biotype: protein_coding
description:
  Baseplate J protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01800
symbol: ALF16986.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01805
symbol: ALF16987.1
gene_biotype: protein_coding
description:
  Endolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01825
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: RN98_01830
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: RN98_01835
symbol: cysS
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RN98_01840
symbol: ALF16993.1
gene_biotype: protein_coding
description:
  Mini-ribonuclease 3-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01845
symbol: ppx
gene_biotype: protein_coding
description:
  Rod-share determining protein MreBH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01915
symbol: ALF16997.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01920
symbol: aroF
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01925
symbol: ALF16999.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: RN98_01935
symbol: ALF17001.1
gene_biotype: protein_coding
description:
  Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01945
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: RN98_01950
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: RN98_01955
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: RN98_01960
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: RN98_01975
symbol: ALF17008.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01980
symbol: ALF17009.1
gene_biotype: protein_coding
description:
  Abortive phage resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01990
symbol: ALF17011.1
gene_biotype: protein_coding
description:
  Nodulation efficiency protein D (NfeD); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_01995
symbol: nagE
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02000
symbol: fusA-2
gene_biotype: protein_coding
description:
  Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02015
symbol: ALF17016.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02020
symbol: ALF17017.1
gene_biotype: protein_coding
description:
  Oxidoreductase; FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02025
symbol: ALF17018.1
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02030
symbol: ALF17019.1
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02035
symbol: ALF17020.1
gene_biotype: protein_coding
description:
  Heptaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02040
symbol: ALF17021.1
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02050
symbol: ALF17023.1
gene_biotype: protein_coding
description:
  Arsenic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02060
symbol: ALF17025.1
gene_biotype: protein_coding
description:
  2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02065
symbol: ALF17026.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02070
symbol: ALF17027.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02075
symbol: ALF17028.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02080
symbol: ALF17029.1
gene_biotype: protein_coding
description:
  Murein hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02105
symbol: oppF2
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RN98_02110
symbol: oppD
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02115
symbol: dppA2
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02120
symbol: nikC
gene_biotype: protein_coding
description:
  Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02125
symbol: dppB
gene_biotype: protein_coding
description:
  Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02130
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: RN98_02135
symbol: trmH
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RN98_02140
symbol: ALF17039.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: RN98_02145
symbol: leuS
gene_biotype: protein_coding
description:
  leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RN98_02155
symbol: ALF17041.1
gene_biotype: protein_coding
description:
  Phophatidylinositol-4-phosphate 5-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02175
symbol: ALF17045.1
gene_biotype: protein_coding
description:
  Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02180
symbol: ribA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: RN98_02185
symbol: ribE
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02190
symbol: ribD
gene_biotype: protein_coding
description:
  5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: RN98_02195
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: RN98_02200
symbol: nikA
gene_biotype: protein_coding
description:
  Nickel ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02205
symbol: nikB
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02215
symbol: nikD
gene_biotype: protein_coding
description:
  Nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02235
symbol: oppA
gene_biotype: protein_coding
description:
  Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02250
symbol: yejF
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02265
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: RN98_02270
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: RN98_02280
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: RN98_02285
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: RN98_02290
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: RN98_02295
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: RN98_02300
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: RN98_02305
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: RN98_02310
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: RN98_02315
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: RN98_02320
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: RN98_02325
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: RN98_02330
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: RN98_02335
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: RN98_02340
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: RN98_02345
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: RN98_02350
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: RN98_02355
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: RN98_02360
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02365
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: RN98_02370
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: RN98_02380
symbol: ALF17086.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02385
symbol: mreC
gene_biotype: protein_coding
description:
  Cell shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02395
symbol: recO
gene_biotype: protein_coding
description:
  DNA repair protein RecO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02400
symbol: fruA2
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02405
symbol: iro
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: RN98_02410
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: RN98_02415
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: RN98_02420
symbol: pheB
gene_biotype: protein_coding
description:
  ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0735 family.


ensembl_gene_id: RN98_02440
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: RN98_02445
symbol: relA
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: RN98_02450
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: RN98_02470
symbol: hsdM
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02480
symbol: hsdS2
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02495
symbol: hsdR
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: RN98_02505
symbol: ALF17110.1
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02510
symbol: ALF18857.1
gene_biotype: protein_coding
description:
  Axf protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02515
symbol: ALF17111.1
gene_biotype: protein_coding
description:
  Txe/YoeB family addiction module toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02540
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: RN98_02550
symbol: murF
gene_biotype: protein_coding
description:
  Histidinol phosphatase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: RN98_02555
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: RN98_02560
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: RN98_02565
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: RN98_02580
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: RN98_02585
symbol: ALF17125.1
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02590
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02595
symbol: ftsZ2
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: RN98_02610
symbol: tatD
gene_biotype: protein_coding
description:
  Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02615
symbol: acpS
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: RN98_02620
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: RN98_02625
symbol: ALF17132.1
gene_biotype: protein_coding
description:
  Membrane-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02640
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RN98_02645
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RN98_02650
symbol: ALF17135.1
gene_biotype: protein_coding
description:
  Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02660
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxyl transferase; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: RN98_02665
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxyl transferase; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: RN98_02670
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: RN98_02675
symbol: ALF17140.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0265 family.


ensembl_gene_id: RN98_02680
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: RN98_02690
symbol: ALF17142.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02695
symbol: pyrR
gene_biotype: protein_coding
description:
  Phosphoribosyl transferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: RN98_02700
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: RN98_02705
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: RN98_02710
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02715
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02725
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: RN98_02740
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: RN98_02750
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: RN98_02755
symbol: argB
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: RN98_02760
symbol: murI3
gene_biotype: protein_coding
description:
  Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02780
symbol: ALF17156.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02785
symbol: ALF17157.1
gene_biotype: protein_coding
description:
  Helicase SNF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02795
symbol: dnaE
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02800
symbol: ALF17160.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02840
symbol: citF2
gene_biotype: protein_coding
description:
  citrate-ACP transferase, the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02845
symbol: citE2
gene_biotype: protein_coding
description:
  Citrate lyase subunit beta; citryl-ACP lyase; catalyzes the formation of acetate and oxaloacetate from citrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: RN98_02855
symbol: citG
gene_biotype: protein_coding
description:
  triphosphoribosyl-dephospho-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02860
symbol: oadA
gene_biotype: protein_coding
description:
  Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02865
symbol: citS
gene_biotype: protein_coding
description:
  Citrate-sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02875
symbol: ebsC
gene_biotype: protein_coding
description:
  EBSC protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: RN98_02880
symbol: rluD2
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: RN98_02890
symbol: ALF18862.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: RN98_02900
symbol: comFC
gene_biotype: protein_coding
description:
  Competence protein ComF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02905
symbol: ALF17180.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02910
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: RN98_02915
symbol: engD
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: RN98_02920
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: RN98_02985
symbol: ALF17195.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02990
symbol: ALF17196.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_02995
symbol: ALF17197.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03000
symbol: ALF17198.1
gene_biotype: protein_coding
description:
  Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03050
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: RN98_03055
symbol: folA2
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03060
symbol: trkA2
gene_biotype: protein_coding
description:
  Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03065
symbol: ALF17210.1
gene_biotype: protein_coding
description:
  poly(A) polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03085
symbol: ALF17214.1
gene_biotype: protein_coding
description:
  Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03105
symbol: ALF17217.1
gene_biotype: protein_coding
description:
  Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03150
symbol: ALF17225.1
gene_biotype: protein_coding
description:
  Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03170
symbol: cadA
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03180
symbol: arsR
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03190
symbol: phzF
gene_biotype: protein_coding
description:
  Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03195
symbol: ALF17232.1
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03205
symbol: fprA
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03210
symbol: nifJ
gene_biotype: protein_coding
description:
  Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03220
symbol: metC
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03225
symbol: ALF17237.1
gene_biotype: protein_coding
description:
  Aminotransferase class I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03230
symbol: ALF17238.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03235
symbol: ALF17239.1
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03245
symbol: ALF17241.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03260
symbol: fucA
gene_biotype: protein_coding
description:
  Fuculose phosphate aldolase; Catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03280
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eIF-2B alpha/beta/delta subunits family.


ensembl_gene_id: RN98_03285
symbol: mtrK
gene_biotype: protein_coding
description:
  5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: RN98_03290
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03295
symbol: ALF17250.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03300
symbol: ALF17251.1
gene_biotype: protein_coding
description:
  N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M20A family.


ensembl_gene_id: RN98_03305
symbol: ftcD
gene_biotype: protein_coding
description:
  Glutamate formiminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03310
symbol: hutH
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PAL/histidase family.


ensembl_gene_id: RN98_03315
symbol: ALF17254.1
gene_biotype: protein_coding
description:
  Formimidoyltetrahydrofolate cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03320
symbol: hutI
gene_biotype: protein_coding
description:
  Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. HutI family.


ensembl_gene_id: RN98_03335
symbol: ALF17258.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03345
symbol: ALF17260.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03350
symbol: glsA
gene_biotype: protein_coding
description:
  Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03360
symbol: ylxM
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: RN98_03365
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: RN98_03370
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: RN98_03400
symbol: deoD
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03435
symbol: ALF17273.1
gene_biotype: protein_coding
description:
  Recombinase RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03440
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03445
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: RN98_03450
symbol: oppA4
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03465
symbol: nikD2
gene_biotype: protein_coding
description:
  Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03475
symbol: ALF17281.1
gene_biotype: protein_coding
description:
  iron(III) dicitrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03480
symbol: fecD
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RN98_03485
symbol: fecE
gene_biotype: protein_coding
description:
  Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03490
symbol: ALF17284.1
gene_biotype: protein_coding
description:
  iron(III)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03495
symbol: sfuB2
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03500
symbol: ALF17286.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RN98_03520
symbol: ALF17287.1
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03525
symbol: ALF18865.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03535
symbol: nrdD
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03540
symbol: nrdG
gene_biotype: protein_coding
description:
  Ribonucleoside-triphosphate reductase activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03545
symbol: tktC
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03585
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: RN98_03590
symbol: ALF17297.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.


ensembl_gene_id: RN98_03600
symbol: ALF18867.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0109 family.


ensembl_gene_id: RN98_03605
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: RN98_03610
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: RN98_03635
symbol: ALF17305.1
gene_biotype: protein_coding
description:
  Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03645
symbol: ALF17307.1
gene_biotype: protein_coding
description:
  Phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03655
symbol: fdaB
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I fructose-bisphosphate aldolase family.


ensembl_gene_id: RN98_03665
symbol: ALF17311.1
gene_biotype: protein_coding
description:
  Zeta-toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03675
symbol: ALF17312.1
gene_biotype: protein_coding
description:
  Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03680
symbol: res
gene_biotype: protein_coding
description:
  Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03690
symbol: ALF17315.1
gene_biotype: protein_coding
description:
  DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03765
symbol: ALF17328.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03770
symbol: ALF17329.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03775
symbol: ALF17330.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03785
symbol: ALF17332.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03795
symbol: ALF17334.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03820
symbol: ALF17339.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03850
symbol: ALF17345.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03870
symbol: ALF17349.1
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03885
symbol: ALF17351.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03905
symbol: ALF17355.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03960
symbol: ALF17365.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_03980
symbol: ppa
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: RN98_03985
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: RN98_03990
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: RN98_03995
symbol: agcS
gene_biotype: protein_coding
description:
  Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04000
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: RN98_04005
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: RN98_04015
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: RN98_04020
symbol: glpP
gene_biotype: protein_coding
description:
  Antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04025
symbol: ALF17375.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04065
symbol: ALF17383.1
gene_biotype: protein_coding
description:
  N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04080
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family.


ensembl_gene_id: RN98_04085
symbol: ALF17387.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: RN98_04090
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality.


ensembl_gene_id: RN98_04380
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AdoMet synthase family.


ensembl_gene_id: RN98_04385
symbol: gloA
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04390
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RN98_04395
symbol: atpD
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: RN98_04400
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: RN98_04405
symbol: atpA
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: RN98_04410
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RN98_04415
symbol: ALF17444.1
gene_biotype: protein_coding
description:
  ATP synthase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04420
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RN98_04425
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: RN98_04430
symbol: atpI
gene_biotype: protein_coding
description:
  ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04435
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: RN98_04445
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: RN98_04450
symbol: ALF17451.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04455
symbol: lepB
gene_biotype: protein_coding
description:
  Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: RN98_04460
symbol: recJ
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04470
symbol: fbpC
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RN98_04500
symbol: ALF17460.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04510
symbol: ALF17462.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04540
symbol: oppD2
gene_biotype: protein_coding
description:
  Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RN98_04545
symbol: oppF3
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RN98_04550
symbol: ALF17470.1
gene_biotype: protein_coding
description:
  Toxin YoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04555
symbol: ALF17471.1
gene_biotype: protein_coding
description:
  Damage-inducible protein J; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04595
symbol: ALF17476.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04600
symbol: amiD
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04610
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: RN98_04615
symbol: prmC
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: RN98_04620
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: RN98_04625
symbol: ALF17482.1
gene_biotype: protein_coding
description:
  16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04630
symbol: ALF17483.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04635
symbol: ispA
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: RN98_04640
symbol: uppS
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04645
symbol: cdsA
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04650
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: RN98_04655
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04660
symbol: ALF17489.1
gene_biotype: protein_coding
description:
  RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04670
symbol: ALF17491.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04675
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: RN98_04680
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: RN98_04685
symbol: ALF17494.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: RN98_04705
symbol: tolQ
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04710
symbol: exbD
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04715
symbol: tonB
gene_biotype: protein_coding
description:
  Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04725
symbol: idhA
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RN98_04730
symbol: gluD
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: RN98_04745
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: RN98_04755
symbol: ALF17508.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: RN98_04760
symbol: ALF17509.1
gene_biotype: protein_coding
description:
  HrgC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04770
symbol: ALF17511.1
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04775
symbol: ALF17512.1
gene_biotype: protein_coding
description:
  EcsC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04785
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RN98_04790
symbol: atoB
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: RN98_04795
symbol: ALF17516.1
gene_biotype: protein_coding
description:
  Autotransporter subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04800
symbol: ALF17517.1
gene_biotype: protein_coding
description:
  Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04805
symbol: ALF18879.1
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04820
symbol: cad
gene_biotype: protein_coding
description:
  Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: RN98_04835
symbol: ALF17523.1
gene_biotype: protein_coding
description:
  Disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04845
symbol: ALF17525.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04860
symbol: ssb
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04865
symbol: ALF17528.1
gene_biotype: protein_coding
description:
  Cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: RN98_04880
symbol: ALF17531.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04885
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: RN98_04890
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: RN98_04935
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: RN98_04940
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04945
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: RN98_04950
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: RN98_04955
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: RN98_04960
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RN98_04965
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04975
symbol: ALF17550.1
gene_biotype: protein_coding
description:
  Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04980
symbol: ALF17551.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_04990
symbol: ALF17553.1
gene_biotype: protein_coding
description:
  Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05000
symbol: ALF17555.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05005
symbol: ALF17556.1
gene_biotype: protein_coding
description:
  Diaminopropionate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05030
symbol: glnN
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: RN98_05040
symbol: cmk2
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05050
symbol: ALF17565.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RN98_05055
symbol: ALF17566.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: RN98_05070
symbol: ALF17569.1
gene_biotype: protein_coding
description:
  Signal peptide peptidase SppA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05075
symbol: ALF17570.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: RN98_05085
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: RN98_05095
symbol: galU
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05110
symbol: cbiK
gene_biotype: protein_coding
description:
  Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05120
symbol: dpm1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05135
symbol: ung2
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05160
symbol: ALF17586.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HAD-like hydrolase superfamily.


ensembl_gene_id: RN98_05180
symbol: ALF17589.1
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05190
symbol: ALF17591.1
gene_biotype: protein_coding
description:
  LOS biosynthesis enzyme LBGB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05205
symbol: rfaY2
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05210
symbol: ALF17595.1
gene_biotype: protein_coding
description:
  Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05215
symbol: ALF17596.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide cholinephosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05225
symbol: ALF17598.1
gene_biotype: protein_coding
description:
  Cholinephosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05230
symbol: ALF17599.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05235
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: RN98_05245
symbol: ALF18882.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05250
symbol: ALF17601.1
gene_biotype: protein_coding
description:
  1,3-beta-glucan synthase regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05255
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: RN98_05260
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: RN98_05265
symbol: kdsA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: RN98_05280
symbol: sfcA
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05285
symbol: mleP
gene_biotype: protein_coding
description:
  Malate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05290
symbol: ALF17608.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05305
symbol: cysK
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05320
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: RN98_05325
symbol: ALF17615.1
gene_biotype: protein_coding
description:
  Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05330
symbol: ALF17616.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: RN98_05355
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: RN98_05365
symbol: dxs2
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05375
symbol: hlyA
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05380
symbol: ctpA
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: RN98_05385
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: RN98_05390
symbol: rbgA
gene_biotype: protein_coding
description:
  GTPase; Essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05395
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: RN98_05405
symbol: dinP
gene_biotype: protein_coding
description:
  DNA polymerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05425
symbol: ALF17635.1
gene_biotype: protein_coding
description:
  ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05440
symbol: panF
gene_biotype: protein_coding
description:
  Sodium/pantothenate symporter; Mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RN98_05470
symbol: nifR
gene_biotype: protein_coding
description:
  Dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: RN98_05475
symbol: mutS3
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA mismatch repair MutS family.


ensembl_gene_id: RN98_05480
symbol: ALF17646.1
gene_biotype: protein_coding
description:
  S-layer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05485
symbol: lptB
gene_biotype: protein_coding
description:
  LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05490
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: RN98_05495
symbol: ALF17649.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: RN98_05500
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: RN98_05505
symbol: ALF17651.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05525
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: RN98_05535
symbol: dapF2
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: RN98_05540
symbol: ALF18883.1
gene_biotype: protein_coding
description:
  Peptidase S51; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.


ensembl_gene_id: RN98_05545
symbol: ALF17658.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: RN98_05560
symbol: dppC4
gene_biotype: protein_coding
description:
  Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05580
symbol: sda
gene_biotype: protein_coding
description:
  Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05590
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05595
symbol: uvrA2
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: RN98_05600
symbol: kptA
gene_biotype: protein_coding
description:
  RNA 2'-phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05610
symbol: ALF17671.1
gene_biotype: protein_coding
description:
  Dolichol-phosphate mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05615
symbol: ALF17672.1
gene_biotype: protein_coding
description:
  LexA repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05630
symbol: rsbU
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05635
symbol: uvrC2
gene_biotype: protein_coding
description:
  DNA helicase UvrC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05645
symbol: cdr
gene_biotype: protein_coding
description:
  CoA-disulfide reductase; CoADR; specific for coenzyme A disulfide; requires NADH; involved in protecting cells against reactive oxygen species by recycling coenzyme A disulfide which can reduce hydrogen peroxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05650
symbol: ALF17679.1
gene_biotype: protein_coding
description:
  4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05675
symbol: ALF17684.1
gene_biotype: protein_coding
description:
  Thiamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05680
symbol: ALF17685.1
gene_biotype: protein_coding
description:
  Ferritin, Dps family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: RN98_05705
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: RN98_05715
symbol: yqeH
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05725
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: RN98_05745
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: RN98_05760
symbol: ALF17701.1
gene_biotype: protein_coding
description:
  N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05800
symbol: malY3
gene_biotype: protein_coding
description:
  Plastocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05870
symbol: ansA
gene_biotype: protein_coding
description:
  Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05875
symbol: pip
gene_biotype: protein_coding
description:
  Proline iminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family.


ensembl_gene_id: RN98_05880
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: RN98_05885
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: RN98_05890
symbol: ALF17725.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: RN98_05895
symbol: rluB
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RN98_05900
symbol: ALF17727.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RN98_05905
symbol: ALF17728.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05910
symbol: maf
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: RN98_05920
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05930
symbol: ALF17733.1
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05935
symbol: trmU2
gene_biotype: protein_coding
description:
  Thiouridylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05940
symbol: ALF17735.1
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel MscL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05955
symbol: ALF17738.1
gene_biotype: protein_coding
description:
  Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RN98_05960
symbol: fhuC
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05965
symbol: ALF17740.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05980
symbol: ALF17743.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05985
symbol: asnA
gene_biotype: protein_coding
description:
  Aspartate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_05990
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: RN98_06015
symbol: ALF17750.1
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06045
symbol: xylR
gene_biotype: protein_coding
description:
  XylR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06070
symbol: ppdK
gene_biotype: protein_coding
description:
  Pyruvate phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06075
symbol: fbp
gene_biotype: protein_coding
description:
  Class 3; catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06100
symbol: ALF17767.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06140
symbol: ALF17774.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06150
symbol: hxlR
gene_biotype: protein_coding
description:
  HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06155
symbol: ALF17777.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family.


ensembl_gene_id: RN98_06195
symbol: ALF17785.1
gene_biotype: protein_coding
description:
  Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06205
symbol: ALF17787.1
gene_biotype: protein_coding
description:
  CvpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06220
symbol: ALF17790.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06225
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: RN98_06230
symbol: rodA2
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: RN98_06235
symbol: ALF17793.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06255
symbol: crt
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: RN98_06260
symbol: hbd
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06270
symbol: htrB
gene_biotype: protein_coding
description:
  Lauroyl acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06325
symbol: mtnN
gene_biotype: protein_coding
description:
  S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: RN98_06330
symbol: ALF17808.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: RN98_06340
symbol: ALF17810.1
gene_biotype: protein_coding
description:
  Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06345
symbol: ALF17811.1
gene_biotype: protein_coding
description:
  Adhesin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06350
symbol: ALF17812.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: RN98_06415
symbol: ALF17822.1
gene_biotype: protein_coding
description:
  Exonuclease SbcC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06445
symbol: ALF17828.1
gene_biotype: protein_coding
description:
  Amino acid:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06450
symbol: gadB
gene_biotype: protein_coding
description:
  Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the group II decarboxylase family.


ensembl_gene_id: RN98_06465
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RN98_06470
symbol: bioD
gene_biotype: protein_coding
description:
  ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: RN98_06475
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: RN98_06480
symbol: yhfE
gene_biotype: protein_coding
description:
  Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06490
symbol: ALF17837.1
gene_biotype: protein_coding
description:
  Ribonuclease HI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06500
symbol: trkH
gene_biotype: protein_coding
description:
  Potassium transporter KefA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06505
symbol: ALF17840.1
gene_biotype: protein_coding
description:
  Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06510
symbol: pssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: RN98_06515
symbol: ALF17842.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06520
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: RN98_06525
symbol: purC3
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06530
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: RN98_06535
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06540
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06545
symbol: tcmP
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06550
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06560
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: RN98_06580
symbol: ALF17854.1
gene_biotype: protein_coding
description:
  Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06595
symbol: cbiB
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: RN98_06605
symbol: cobD
gene_biotype: protein_coding
description:
  Threonine-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06610
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: RN98_06620
symbol: cbiC
gene_biotype: protein_coding
description:
  Catalyzes the interconversion of precorrin-8X and cobyrinic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06635
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: RN98_06640
symbol: cbiE
gene_biotype: protein_coding
description:
  precorrin-6Y C5,15-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06645
symbol: serA
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RN98_06650
symbol: ALF17868.1
gene_biotype: protein_coding
description:
  precorrin-8W decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06675
symbol: cbiL
gene_biotype: protein_coding
description:
  Precorrin-2 C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway.


ensembl_gene_id: RN98_06685
symbol: cbiF
gene_biotype: protein_coding
description:
  Catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06720
symbol: cbiG
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06725
symbol: cobJ
gene_biotype: protein_coding
description:
  cobalt-precorrin-3B C(17)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: RN98_06730
symbol: ALF17882.1
gene_biotype: protein_coding
description:
  Precorrin-6x reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06735
symbol: ALF17883.1
gene_biotype: protein_coding
description:
  Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06740
symbol: czcD
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: RN98_06750
symbol: ALF17886.1
gene_biotype: protein_coding
description:
  Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06760
symbol: asrC
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: RN98_06765
symbol: asrB
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06770
symbol: asrA
gene_biotype: protein_coding
description:
  Sulfite reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06775
symbol: ALF17891.1
gene_biotype: protein_coding
description:
  Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06785
symbol: ALF18888.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06795
symbol: ALF17894.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltranspeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06810
symbol: ALF17897.1
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06815
symbol: ALF17898.1
gene_biotype: protein_coding
description:
  Poly-gamma-glutamate synthase PgsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06820
symbol: ALF17899.1
gene_biotype: protein_coding
description:
  Poly-gamma-glutamate biosynthesis protein PgsC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06830
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06835
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: RN98_06850
symbol: hldE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: RN98_06855
symbol: ALF17905.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06860
symbol: ALF17906.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06875
symbol: ALF17909.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06890
symbol: ALF17912.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06905
symbol: ALF17915.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06950
symbol: ALF17920.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06960
symbol: hslJ
gene_biotype: protein_coding
description:
  Heat-shock protein HslJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06975
symbol: ALF17925.1
gene_biotype: protein_coding
description:
  Cobinamide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_06980
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: RN98_06985
symbol: cobC
gene_biotype: protein_coding
description:
  Alpha-ribazole phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: RN98_06990
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: RN98_07005
symbol: ALF17931.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07010
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: RN98_07025
symbol: ALF17935.1
gene_biotype: protein_coding
description:
  NAD(FAD)-utilizing dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07030
symbol: kdsD
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07035
symbol: fthC
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: RN98_07040
symbol: ALF17938.1
gene_biotype: protein_coding
description:
  DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07050
symbol: ALF17940.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07055
symbol: ALF17941.1
gene_biotype: protein_coding
description:
  Spore photoproduct lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07060
symbol: ALF17942.1
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07075
symbol: ALF17945.1
gene_biotype: protein_coding
description:
  Malonyl-[acyl-carrier protein] O-methyltransferase BioC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07085
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07130
symbol: ALF17956.1
gene_biotype: protein_coding
description:
  Stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07170
symbol: ald
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07190
symbol: lon2
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07195
symbol: ALF17968.1
gene_biotype: protein_coding
description:
  DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07255
symbol: ALF17977.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07260
symbol: ALF17978.1
gene_biotype: protein_coding
description:
  Cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07285
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07295
symbol: ALF17984.1
gene_biotype: protein_coding
description:
  FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07300
symbol: ALF17985.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RN98_07305
symbol: ALF17986.1
gene_biotype: protein_coding
description:
  Virulence factor MviN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07315
symbol: coaBC
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: RN98_07320
symbol: chrA
gene_biotype: protein_coding
description:
  Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07330
symbol: ALF17991.1
gene_biotype: protein_coding
description:
  NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07360
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: RN98_07375
symbol: hypB
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07400
symbol: ALF18005.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: RN98_07410
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: RN98_07415
symbol: ALF18008.1
gene_biotype: protein_coding
description:
  YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07450
symbol: thrA
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07465
symbol: hutI2
gene_biotype: protein_coding
description:
  Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07480
symbol: ALF18019.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07490
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: RN98_07510
symbol: glpX
gene_biotype: protein_coding
description:
  Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07515
symbol: ALF18024.1
gene_biotype: protein_coding
description:
  Septum formation initiator subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07520
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: RN98_07525
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07530
symbol: ftsI2
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07535
symbol: rbn
gene_biotype: protein_coding
description:
  Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07545
symbol: aspC
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07560
symbol: glgA
gene_biotype: protein_coding
description:
  Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07565
symbol: glgD
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07570
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: RN98_07575
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: RN98_07580
symbol: glgP
gene_biotype: protein_coding
description:
  Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: RN98_07585
symbol: malQ
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07605
symbol: ALF18042.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: RN98_07610
symbol: ALF18043.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07615
symbol: ALF18044.1
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family.


ensembl_gene_id: RN98_07625
symbol: ALF18046.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07630
symbol: aroB
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07670
symbol: putP
gene_biotype: protein_coding
description:
  Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RN98_07690
symbol: ALF18057.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07695
symbol: ALF18058.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07700
symbol: ALF18059.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07705
symbol: pepF
gene_biotype: protein_coding
description:
  Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07710
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: RN98_07715
symbol: uraA
gene_biotype: protein_coding
description:
  Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07720
symbol: ALF18063.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07725
symbol: ALF18064.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07730
symbol: ALF18065.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07735
symbol: ALF18066.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07755
symbol: gltP
gene_biotype: protein_coding
description:
  Sodium:dicarboxylate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: RN98_07765
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: RN98_07780
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07790
symbol: ALF18077.1
gene_biotype: protein_coding
description:
  Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07800
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: RN98_07805
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: RN98_07815
symbol: thrS2
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: RN98_07820
symbol: ALF18083.1
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07840
symbol: ALF18087.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07845
symbol: ALF18088.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07855
symbol: ALF18090.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07860
symbol: malY2
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07865
symbol: ALF18092.1
gene_biotype: protein_coding
description:
  Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07875
symbol: abfT
gene_biotype: protein_coding
description:
  4-hydroxybutyrate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07880
symbol: ALF18095.1
gene_biotype: protein_coding
description:
  DNA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07885
symbol: ALF18895.1
gene_biotype: protein_coding
description:
  Malonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07905
symbol: ALF18896.1
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07910
symbol: ALF18098.1
gene_biotype: protein_coding
description:
  Glucosamine-fructose-6-phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07915
symbol: ALF18099.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07930
symbol: ALF18102.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07935
symbol: ALF18103.1
gene_biotype: protein_coding
description:
  Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07940
symbol: gor
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_07945
symbol: ALF18105.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: RN98_07995
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08000
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.


ensembl_gene_id: RN98_08005
symbol: ALF18116.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08015
symbol: gapC
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: RN98_08020
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: RN98_08025
symbol: ALF18120.1
gene_biotype: protein_coding
description:
  FMN-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08040
symbol: metQ
gene_biotype: protein_coding
description:
  Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: RN98_08045
symbol: metI
gene_biotype: protein_coding
description:
  Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08050
symbol: metN
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RN98_08060
symbol: hutG
gene_biotype: protein_coding
description:
  Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: RN98_08080
symbol: ALF18131.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08085
symbol: ALF18132.1
gene_biotype: protein_coding
description:
  4-hydroxybutyryl-CoA dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08110
symbol: ALF18897.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08120
symbol: troA
gene_biotype: protein_coding
description:
  Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: RN98_08125
symbol: ALF18138.1
gene_biotype: protein_coding
description:
  Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08150
symbol: ALF18143.1
gene_biotype: protein_coding
description:
  EBSC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08160
symbol: groEL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: RN98_08165
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: RN98_08180
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: RN98_08185
symbol: rpe
gene_biotype: protein_coding
description:
  Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: RN98_08195
symbol: fnbA
gene_biotype: protein_coding
description:
  Ferrous iron transporter C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08205
symbol: ALF18152.1
gene_biotype: protein_coding
description:
  Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08215
symbol: ALF18154.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08225
symbol: hcp2
gene_biotype: protein_coding
description:
  Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O; Belongs to the HCP family.


ensembl_gene_id: RN98_08230
symbol: ALF18157.1
gene_biotype: protein_coding
description:
  Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: RN98_08235
symbol: amaA
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M20A family.


ensembl_gene_id: RN98_08240
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: RN98_08245
symbol: pta
gene_biotype: protein_coding
description:
  Phosphotransacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08250
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: RN98_08260
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: RN98_08285
symbol: lemA
gene_biotype: protein_coding
description:
  LemA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08305
symbol: dap2
gene_biotype: protein_coding
description:
  Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08325
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: RN98_08335
symbol: ALF18177.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08340
symbol: ALF18178.1
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08345
symbol: trxB2
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08355
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08360
symbol: mglB
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Wtih MglAC is involved in the transport of beta-methylgalactoside; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08365
symbol: mglA
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08370
symbol: mglC
gene_biotype: protein_coding
description:
  Beta-methylgalactoside transporter permease; ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RN98_08375
symbol: ALF18185.1
gene_biotype: protein_coding
description:
  Macrolide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08405
symbol: glgX
gene_biotype: protein_coding
description:
  Isoamylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08410
symbol: ALF18191.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08420
symbol: ALF18193.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08425
symbol: msrA
gene_biotype: protein_coding
description:
  Trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: RN98_08430
symbol: ccdA
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08435
symbol: ALF18196.1
gene_biotype: protein_coding
description:
  DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08440
symbol: ALF18197.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein SpoIID; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08445
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsB family.


ensembl_gene_id: RN98_08450
symbol: pgm2
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08455
symbol: ALF18200.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: RN98_08460
symbol: ltaE
gene_biotype: protein_coding
description:
  Amino acid lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08470
symbol: ALF18203.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: RN98_08480
symbol: ALF18205.1
gene_biotype: protein_coding
description:
  Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08490
symbol: feoB
gene_biotype: protein_coding
description:
  Iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: RN98_08500
symbol: ALF18209.1
gene_biotype: protein_coding
description:
  Mercuric reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08510
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: RN98_08515
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: RN98_08520
symbol: ALF18213.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08530
symbol: ALF18215.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: RN98_08535
symbol: phnC
gene_biotype: protein_coding
description:
  Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08545
symbol: nagA
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08555
symbol: phnD
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08560
symbol: phnC2
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: RN98_08565
symbol: phnE
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08570
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08575
symbol: ALF18224.1
gene_biotype: protein_coding
description:
  2-hydroxyglutaryl-CoA dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08605
symbol: ALF18230.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08610
symbol: ALF18231.1
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08615
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: RN98_08620
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: RN98_08625
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: RN98_08630
symbol: pcrA
gene_biotype: protein_coding
description:
  AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08640
symbol: ALF18237.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08655
symbol: ALF18240.1
gene_biotype: protein_coding
description:
  Aminobenzoyl-glutamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08690
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: RN98_08700
symbol: ALF18248.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08710
symbol: recQ
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08725
symbol: ALF18252.1
gene_biotype: protein_coding
description:
  DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08765
symbol: ALF18260.1
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08775
symbol: ylmE
gene_biotype: protein_coding
description:
  Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: RN98_08780
symbol: hemN2
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RN98_08785
symbol: pgm
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08790
symbol: traT
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08810
symbol: ALF18269.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08815
symbol: gntP4
gene_biotype: protein_coding
description:
  D-serine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08820
symbol: dsdA
gene_biotype: protein_coding
description:
  Serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serine/threonine dehydratase family. DsdA subfamily.


ensembl_gene_id: RN98_08825
symbol: ALF18272.1
gene_biotype: protein_coding
description:
  Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08840
symbol: ALF18275.1
gene_biotype: protein_coding
description:
  Glutamate:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08845
symbol: manA
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08855
symbol: tsaD
gene_biotype: protein_coding
description:
  Protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: RN98_08865
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: RN98_08880
symbol: ALF18283.1
gene_biotype: protein_coding
description:
  ADP-heptose--LPS heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08885
symbol: ALF18284.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08890
symbol: lgtF
gene_biotype: protein_coding
description:
  Beta 1,4 glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08900
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08905
symbol: ALF18288.1
gene_biotype: protein_coding
description:
  Ferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08915
symbol: ALF18290.1
gene_biotype: protein_coding
description:
  Hemolysin activator protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08920
symbol: ALF18291.1
gene_biotype: protein_coding
description:
  Outer membrane insertion C- signal; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08940
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: RN98_08945
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PlsY family.


ensembl_gene_id: RN98_08955
symbol: ALF18298.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family.


ensembl_gene_id: RN98_08965
symbol: ALF18300.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0324 family.


ensembl_gene_id: RN98_08975
symbol: ALF18302.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08980
symbol: ALF18303.1
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_08985
symbol: ALF18304.1
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: RN98_08995
symbol: ALF18306.1
gene_biotype: protein_coding
description:
  DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09000
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09010
symbol: queH
gene_biotype: protein_coding
description:
  Recombinase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: RN98_09055
symbol: ldhA
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RN98_09070
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09075
symbol: ALF18322.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: RN98_09080
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.


ensembl_gene_id: RN98_09100
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: RN98_09105
symbol: rpmE
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL31 family.


ensembl_gene_id: RN98_09120
symbol: ALF18329.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RN98_09125
symbol: ALF18330.1
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09130
symbol: ALF18331.1
gene_biotype: protein_coding
description:
  Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09135
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: RN98_09140
symbol: miaB
gene_biotype: protein_coding
description:
  Dimethylallyladenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: RN98_09145
symbol: ALF18334.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09155
symbol: fldA
gene_biotype: protein_coding
description:
  Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: RN98_09170
symbol: ALF18339.1
gene_biotype: protein_coding
description:
  Murein hydrolase transporter LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09175
symbol: lysS
gene_biotype: protein_coding
description:
  lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: RN98_09190
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: RN98_09195
symbol: hexB
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA mismatch repair MutL/HexB family.


ensembl_gene_id: RN98_09220
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: RN98_09225
symbol: hemB
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: RN98_09250
symbol: rbr
gene_biotype: protein_coding
description:
  Rubrerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09255
symbol: aldA
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: RN98_09265
symbol: ALF18356.1
gene_biotype: protein_coding
description:
  Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09270
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: RN98_09290
symbol: pxpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: RN98_09300
symbol: ALF18360.1
gene_biotype: protein_coding
description:
  Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09305
symbol: ALF18361.1
gene_biotype: protein_coding
description:
  Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09310
symbol: ALF18362.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: RN98_09335
symbol: macA
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: RN98_09340
symbol: macB
gene_biotype: protein_coding
description:
  Macrolide transporter; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: RN98_09355
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpB family.


ensembl_gene_id: RN98_09390
symbol: ALF18377.1
gene_biotype: protein_coding
description:
  Toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09395
symbol: ALF18378.1
gene_biotype: protein_coding
description:
  Toxin MazF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09400
symbol: ALF18379.1
gene_biotype: protein_coding
description:
  CITX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09405
symbol: citC
gene_biotype: protein_coding
description:
  [citrate [pro-3S]-lyase] ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09410
symbol: ALF18381.1
gene_biotype: protein_coding
description:
  Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09430
symbol: gluA
gene_biotype: protein_coding
description:
  Glutamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09435
symbol: artM
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RN98_09440
symbol: glnP
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09445
symbol: racD
gene_biotype: protein_coding
description:
  Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/glutamate racemases family.


ensembl_gene_id: RN98_09450
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: RN98_09465
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: RN98_09475
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09490
symbol: pflB
gene_biotype: protein_coding
description:
  Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09495
symbol: pflA
gene_biotype: protein_coding
description:
  Activates pyruvate formate-lyase 1 under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09500
symbol: livF
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09510
symbol: livM
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RN98_09515
symbol: livH
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RN98_09520
symbol: livJ
gene_biotype: protein_coding
description:
  Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09525
symbol: ALF18404.1
gene_biotype: protein_coding
description:
  L-allo-threonine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RN98_09530
symbol: ALF18405.1
gene_biotype: protein_coding
description:
  GlcNAc transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09545
symbol: kdgT
gene_biotype: protein_coding
description:
  2-keto-3-deoxygluconate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09555
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PdxA family.


ensembl_gene_id: RN98_09565
symbol: garD
gene_biotype: protein_coding
description:
  Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09575
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: RN98_09580
symbol: fruK
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09585
symbol: fruA
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09595
symbol: guaA
gene_biotype: protein_coding
description:
  GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09610
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: RN98_09615
symbol: ALF18420.1
gene_biotype: protein_coding
description:
  Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09625
symbol: comEC
gene_biotype: protein_coding
description:
  Competence protein ComE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09630
symbol: melB
gene_biotype: protein_coding
description:
  Melibiose carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09635
symbol: cstA
gene_biotype: protein_coding
description:
  Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09645
symbol: ypdB
gene_biotype: protein_coding
description:
  LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09665
symbol: ALF18430.1
gene_biotype: protein_coding
description:
  Magnesium transporter MgtC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09670
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: RN98_09675
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09710
symbol: gcdA
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09715
symbol: gctB
gene_biotype: protein_coding
description:
  Glutaconate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09725
symbol: oadB
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09730
symbol: gcdC
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09735
symbol: ALF18444.1
gene_biotype: protein_coding
description:
  Sodium pump decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09750
symbol: ALF18447.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09805
symbol: ALF18456.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09810
symbol: ALF18457.1
gene_biotype: protein_coding
description:
  OLD family endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09835
symbol: glpO
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09860
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09865
symbol: minD
gene_biotype: protein_coding
description:
  Septum site-determining protein MinD; ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09870
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: RN98_09890
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: RN98_09960
symbol: ALF18483.1
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09965
symbol: ybjR
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramyl-tripeptide amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_09970
symbol: metH
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: RN98_09975
symbol: metF
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: RN98_09985
symbol: ALF18488.1
gene_biotype: protein_coding
description:
  DNA integrity scanning protein DisA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DisA family.


ensembl_gene_id: RN98_09990
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: RN98_09995
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: RN98_10000
symbol: rng
gene_biotype: protein_coding
description:
  Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10010
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: RN98_10015
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: RN98_10025
symbol: fabD
gene_biotype: protein_coding
description:
  Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10030
symbol: fabH2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: RN98_10035
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: RN98_10100
symbol: ALF18508.1
gene_biotype: protein_coding
description:
  Hemolysin activator protein precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10125
symbol: ALF18513.1
gene_biotype: protein_coding
description:
  Sodium:sulfate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10130
symbol: bcpA
gene_biotype: protein_coding
description:
  Carboxyvinyl-carboxyphosphonate phosphorylmutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10135
symbol: mvaB
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10140
symbol: ALF18516.1
gene_biotype: protein_coding
description:
  AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10165
symbol: ilvB
gene_biotype: protein_coding
description:
  Acetohydroxyacid synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: RN98_10170
symbol: gabD
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10225
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: RN98_10240
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: RN98_10285
symbol: kdpE
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10300
symbol: pduB
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10305
symbol: pduC
gene_biotype: protein_coding
description:
  Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10310
symbol: pduD
gene_biotype: protein_coding
description:
  Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10315
symbol: pduE
gene_biotype: protein_coding
description:
  Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10320
symbol: pduC-2
gene_biotype: protein_coding
description:
  Diol dehydratase reactivase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10330
symbol: ALF18549.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10335
symbol: ALF18550.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10340
symbol: pduL
gene_biotype: protein_coding
description:
  Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: RN98_10345
symbol: ALF18552.1
gene_biotype: protein_coding
description:
  Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10350
symbol: eutN
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10355
symbol: ALF18554.1
gene_biotype: protein_coding
description:
  DhaG protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10365
symbol: glpF
gene_biotype: protein_coding
description:
  Glycerol transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: RN98_10370
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: RN98_10375
symbol: dhaK
gene_biotype: protein_coding
description:
  With DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10380
symbol: dhaL
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase; With DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10390
symbol: gntP3
gene_biotype: protein_coding
description:
  Gluconate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10405
symbol: ALF18564.1
gene_biotype: protein_coding
description:
  DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10415
symbol: ALF18565.1
gene_biotype: protein_coding
description:
  Ketoacyl reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RN98_10420
symbol: ALF18566.1
gene_biotype: protein_coding
description:
  Ceramide glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10435
symbol: ALF18569.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10445
symbol: ALF18571.1
gene_biotype: protein_coding
description:
  CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10450
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10460
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: RN98_10470
symbol: ALF18576.1
gene_biotype: protein_coding
description:
  Converts methylaspartate to L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10475
symbol: mutL2
gene_biotype: protein_coding
description:
  MutL protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10480
symbol: ALF18578.1
gene_biotype: protein_coding
description:
  Methylaspartate mutase subunit E; catalyzes the formation of threo-beta-methyl-L-aspartate from L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10485
symbol: dxnH
gene_biotype: protein_coding
description:
  Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10490
symbol: ctfA
gene_biotype: protein_coding
description:
  Branched-chain amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10495
symbol: atoE
gene_biotype: protein_coding
description:
  Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10510
symbol: ALF18583.1
gene_biotype: protein_coding
description:
  L-lysine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10515
symbol: kamE
gene_biotype: protein_coding
description:
  Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10525
symbol: mutS2
gene_biotype: protein_coding
description:
  Methionine ABC transporter substrate-binding protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: RN98_10535
symbol: kamA
gene_biotype: protein_coding
description:
  Glutamate 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10540
symbol: ALF18589.1
gene_biotype: protein_coding
description:
  L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10545
symbol: ALF18590.1
gene_biotype: protein_coding
description:
  3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10550
symbol: ALF18591.1
gene_biotype: protein_coding
description:
  3-aminobutyryl-CoA ammonia lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10565
symbol: ALF18594.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10570
symbol: rpiB
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10610
symbol: ALF18603.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10620
symbol: ALF18605.1
gene_biotype: protein_coding
description:
  Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10630
symbol: glpQ3
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10635
symbol: ALF18608.1
gene_biotype: protein_coding
description:
  General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10645
symbol: ALF18610.1
gene_biotype: protein_coding
description:
  BAX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10770
symbol: dctD
gene_biotype: protein_coding
description:
  Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10795
symbol: pepA
gene_biotype: protein_coding
description:
  Aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. Belongs to the peptidase M17 family.


ensembl_gene_id: RN98_10840
symbol: ALF18639.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10860
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: RN98_10865
symbol: ALF18641.1
gene_biotype: protein_coding
description:
  tRNA (guanine-N7)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10885
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: RN98_10890
symbol: ALF18645.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10900
symbol: ALF18647.1
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: RN98_10905
symbol: comEA
gene_biotype: protein_coding
description:
  Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10915
symbol: pilT
gene_biotype: protein_coding
description:
  Twitching motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10920
symbol: comM
gene_biotype: protein_coding
description:
  Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10930
symbol: nusB
gene_biotype: protein_coding
description:
  Antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: RN98_10935
symbol: ALF18653.1
gene_biotype: protein_coding
description:
  Diacylglyceryl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10945
symbol: ALF18655.1
gene_biotype: protein_coding
description:
  Alkaline-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_10950
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: RN98_10955
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: RN98_10965
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: RN98_10990
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: RN98_11000
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: RN98_11005
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RN98_11045
symbol: ALF18673.1
gene_biotype: protein_coding
description:
  dCTP deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11075
symbol: ALF18679.1
gene_biotype: protein_coding
description:
  DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11080
symbol: ALF18680.1
gene_biotype: protein_coding
description:
  Overcoming lysogenization defect protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11105
symbol: algI
gene_biotype: protein_coding
description:
  Alanine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11110
symbol: ALF18685.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11115
symbol: ALF18686.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11155
symbol: ALF18694.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11160
symbol: ALF18695.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11170
symbol: ALF18697.1
gene_biotype: protein_coding
description:
  Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11180
symbol: ALF18699.1
gene_biotype: protein_coding
description:
  UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11190
symbol: rfbD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: RN98_11195
symbol: rfbC
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: RN98_11200
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: RN98_11205
symbol: rfaD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: RN98_11225
symbol: pnpA
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: RN98_11230
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: RN98_11240
symbol: mraW
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: RN98_11250
symbol: trmA
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: RN98_11295
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: RN98_11300
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: RN98_11315
symbol: ALF18723.1
gene_biotype: protein_coding
description:
  Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: RN98_11320
symbol: ALF18724.1
gene_biotype: protein_coding
description:
  Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11330
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: RN98_11335
symbol: cgtA
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: RN98_11355
symbol: ALF18729.1
gene_biotype: protein_coding
description:
  biotin--acetyl-CoA-carboxylase ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11370
symbol: ALF18732.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory IIA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11380
symbol: ALF18734.1
gene_biotype: protein_coding
description:
  DAK2 domain fusion protein YloV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11390
symbol: cinA
gene_biotype: protein_coding
description:
  Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: RN98_11395
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11405
symbol: ALF18739.1
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoaE family.


ensembl_gene_id: RN98_11430
symbol: gpxA
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: RN98_11435
symbol: ALF18919.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11440
symbol: opuCA
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11445
symbol: proWX
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11455
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11460
symbol: ysxC
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: RN98_11465
symbol: lonB
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: RN98_11470
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: RN98_11475
symbol: clpP
gene_biotype: protein_coding
description:
  Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RN98_11480
symbol: tig-2
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: RN98_11490
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: RN98_11495
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: RN98_11505
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: RN98_11510
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: RN98_11540
symbol: ALF18758.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11545
symbol: pepP
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11570
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: RN98_11575
symbol: cas1
gene_biotype: protein_coding
description:
  Subtype I-B CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: RN98_11580
symbol: cas4
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11585
symbol: ALF18767.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11590
symbol: ALF18768.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11595
symbol: ALF18922.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11680
symbol: ALF18778.1
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11685
symbol: ALF18779.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11690
symbol: ALF18780.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11695
symbol: ALF18781.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11700
symbol: ALF18782.1
gene_biotype: protein_coding
description:
  2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11705
symbol: ALF18783.1
gene_biotype: protein_coding
description:
  Myo-inositol catabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11720
symbol: ALF18786.1
gene_biotype: protein_coding
description:
  Sialic acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11725
symbol: tdcF
gene_biotype: protein_coding
description:
  Reactive intermediate/imine deaminase; Has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11730
symbol: ALF18788.1
gene_biotype: protein_coding
description:
  DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11735
symbol: deaD
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11740
symbol: mltG
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: RN98_11745
symbol: ALF18791.1
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11750
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RN98_11755
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: RN98_11765
symbol: ahpC
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: RN98_11790
symbol: tpl-2
gene_biotype: protein_coding
description:
  Tyrosine phenol-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11800
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: RN98_11810
symbol: trkA
gene_biotype: protein_coding
description:
  Potassium transporter KtrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11815
symbol: ALF18805.1
gene_biotype: protein_coding
description:
  Potassium transporter KtrB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11825
symbol: ALF18807.1
gene_biotype: protein_coding
description:
  Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11835
symbol: ALF18808.1
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11845
symbol: trpG
gene_biotype: protein_coding
description:
  Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11850
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11860
symbol: ntpD
gene_biotype: protein_coding
description:
  ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RN98_11865
symbol: ntpB
gene_biotype: protein_coding
description:
  ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: RN98_11870
symbol: ntpA
gene_biotype: protein_coding
description:
  ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: RN98_11875
symbol: ntpG
gene_biotype: protein_coding
description:
  ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RN98_11880
symbol: ntpC
gene_biotype: protein_coding
description:
  ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11885
symbol: ntpE
gene_biotype: protein_coding
description:
  ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RN98_11890
symbol: ntpK
gene_biotype: protein_coding
description:
  ATP synthase subunit K; Produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family.


ensembl_gene_id: RN98_11895
symbol: ntpI
gene_biotype: protein_coding
description:
  ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.


ensembl_gene_id: RN98_11900
symbol: ntpG2
gene_biotype: protein_coding
description:
  ATP synthase subunit G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11905
symbol: ALF18822.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11915
symbol: ALF18824.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11945
symbol: thiH
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11950
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: RN98_11960
symbol: thiS
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RN98_11965
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: RN98_11970
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: RN98_11975
symbol: thiD
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


