# pathwayInfo

id: PF05135
description: Phage gp6-like head-tail connector protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05135
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05135_Phage_gp6-like_head-tail_connector_protein


id: PF05157
description: Type II secretion system (T2SS), protein E, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05157
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05157_Type_II_secretion_system_(T2SS),_protein_E,_N-terminal_domain


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05201
description: Glutamyl-tRNAGlu reductase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05201
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05201_Glutamyl-tRNAGlu_reductase,_N-terminal_domain


id: PF05378
description: Hydantoinase/oxoprolinase N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05378
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05378_Hydantoinase/oxoprolinase_N-terminal_region


id: PF05389
description: Negative regulator of genetic competence (MecA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05389
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05389_Negative_regulator_of_genetic_competence_(MecA)


id: PF05437
description: Branched-chain amino acid transport protein (AzlD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05437
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05437_Branched-chain_amino_acid_transport_protein_(AzlD)


id: PF05504
description: Spore germination B3/ GerAC like, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05504
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05504_Spore_germination_B3/_GerAC_like,_C-terminal_


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF05845
description: Bacterial phosphonate metabolism protein (PhnH)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05845
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05845_Bacterial_phosphonate_metabolism_protein_(PhnH)


id: PF05861
description: Bacterial phosphonate metabolism protein (PhnI)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05861
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05861_Bacterial_phosphonate_metabolism_protein_(PhnI)


id: PF05891
description: AdoMet dependent proline di-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05891
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05891_AdoMet_dependent_proline_di-methyltransferase


id: PF05949
description: Bacterial protein of unknown function (DUF881)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05949
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05949_Bacterial_protein_of_unknown_function_(DUF881)


id: PF05979
description: Bacterial protein of unknown function (DUF896)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05979
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05979_Bacterial_protein_of_unknown_function_(DUF896)


id: PF05985
description: Ethanolamine ammonia-lyase light chain (EutC)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05985
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF05985_Ethanolamine_ammonia-lyase_light_chain_(EutC)


id: PF06050
description: 2-hydroxyglutaryl-CoA dehydratase, D-component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06050
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06050_2-hydroxyglutaryl-CoA_dehydratase,_D-component_


id: PF06107
description: Bacterial protein of unknown function (DUF951)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06107
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06107_Bacterial_protein_of_unknown_function_(DUF951)


id: PF06133
description: Control of competence regulator ComK, YlbF/YmcA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06133
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06133_Control_of_competence_regulator_ComK,_YlbF/YmcA


id: PF06289
description: Flagellar and Swarming motility proteins
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06289
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06289_Flagellar_and_Swarming_motility_proteins


id: PF06305
description: Lipopolysaccharide assembly protein A domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06305
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06305_Lipopolysaccharide_assembly_protein_A_domain


id: PF06325
description: Ribosomal protein L11 methyltransferase (PrmA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06325
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06325_Ribosomal_protein_L11_methyltransferase_(PrmA)


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06429
description: Flagellar basal body rod FlgEFG protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06429
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06429_Flagellar_basal_body_rod_FlgEFG_protein_C-terminal


id: PF06686
description: Stage III sporulation protein AC/AD protein family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06686
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06686_Stage_III_sporulation_protein_AC/AD_protein_family


id: PF06695
description: Putative small multi-drug export protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06695
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06695_Putative_small_multi-drug_export_protein


id: PF06750
description: Bacterial Peptidase A24 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06750
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06750_Bacterial_Peptidase_A24_N-terminal_domain


id: PF06751
description: Ethanolamine ammonia lyase large subunit (EutB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06751
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06751_Ethanolamine_ammonia_lyase_large_subunit_(EutB)


id: PF06798
description: PrkA serine protein kinase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06798
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06798_PrkA_serine_protein_kinase_C-terminal_domain


id: PF06808
description: Tripartite ATP-independent periplasmic transporter, DctM component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06808
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06808_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component


id: PF06857
description: Malonate decarboxylase delta subunit (MdcD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06857
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06857_Malonate_decarboxylase_delta_subunit_(MdcD)


id: PF06898
description: Putative stage IV sporulation protein YqfD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06898
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06898_Putative_stage_IV_sporulation_protein_YqfD


id: PF06905
description: Fas apoptotic inhibitory molecule (FAIM1)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06905
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06905_Fas_apoptotic_inhibitory_molecule_(FAIM1)


id: PF06925
description: Monogalactosyldiacylglycerol (MGDG) synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06925
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06925_Monogalactosyldiacylglycerol_(MGDG)_synthase


id: PF06941
description: 5 nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06941
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06941_5_nucleotidase,_deoxy_(Pyrimidine),_cytosolic_type_C_protein_(NT5C)


id: PF06983
description: 3-demethylubiquinone-9 3-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06983
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF06983_3-demethylubiquinone-9_3-methyltransferase


id: PF07155
description: ECF-type riboflavin transporter, S component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07155
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07155_ECF-type_riboflavin_transporter,_S_component


id: PF07195
description: Flagellar hook-associated protein 2 C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07195
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07195_Flagellar_hook-associated_protein_2_C-terminus


id: PF07261
description: Replication initiation and membrane attachment
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07261
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07261_Replication_initiation_and_membrane_attachment


id: PF07331
description: Tripartite tricarboxylate transporter TctB family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07331
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07331_Tripartite_tricarboxylate_transporter_TctB_family


id: PF07355
description: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07355
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07355_Glycine/sarcosine/betaine_reductase_selenoprotein_B_(GRDB)


id: PF07441
description: SigmaK-factor processing regulatory protein BofA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07441
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07441_SigmaK-factor_processing_regulatory_protein_BofA


id: PF07456
description: Heptaprenyl diphosphate synthase component I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07456
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07456_Heptaprenyl_diphosphate_synthase_component_I


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07664
description: Ferrous iron transport protein B C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07664
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07664_Ferrous_iron_transport_protein_B_C_terminus


id: PF07683
description: Cobalamin synthesis protein cobW C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07683
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07683_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07698
description: 7TM receptor with intracellular HD hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07698
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07698_7TM_receptor_with_intracellular_HD_hydrolase


id: PF07726
description: ATPase family associated with various cellular activities (AAA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07726
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07726_ATPase_family_associated_with_various_cellular_activities_(AAA)


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07905
description: Purine catabolism regulatory protein-like family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07905
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07905_Purine_catabolism_regulatory_protein-like_family


id: PF07927
description: HicA toxin of bacterial toxin-antitoxin,
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07927
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07927_HicA_toxin_of_bacterial_toxin-antitoxin,_


id: PF07943
description: Penicillin-binding protein 5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07943
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07943_Penicillin-binding_protein_5,_C-terminal_domain


id: PF07963
description: Prokaryotic N-terminal methylation motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07963
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07963_Prokaryotic_N-terminal_methylation_motif


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08334
description: Type II secretion system (T2SS), protein G
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08334
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08334_Type_II_secretion_system_(T2SS),_protein_G


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08388
description: Group II intron, maturase-specific domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08388
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08388_Group_II_intron,_maturase-specific_domain


id: PF08392
description: FAE1/Type III polyketide synthase-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08392
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08392_FAE1/Type_III_polyketide_synthase-like_protein


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08477
description: Ras of Complex, Roc, domain of DAPkinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08477
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08477_Ras_of_Complex,_Roc,_domain_of_DAPkinase


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08546
description: Ketopantoate reductase PanE/ApbA C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08546
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08546_Ketopantoate_reductase_PanE/ApbA_C_terminal


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF08704
description: tRNA methyltransferase complex GCD14 subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08704
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08704_tRNA_methyltransferase_complex_GCD14_subunit


id: PF08735
description: Putative pyruvate format-lyase activating enzyme (DUF1786)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08735
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08735_Putative_pyruvate_format-lyase_activating_enzyme_(DUF1786)


id: PF08769
description: Sporulation initiation factor Spo0A C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08769
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08769_Sporulation_initiation_factor_Spo0A_C_terminal


id: PF08890
description: Phage XkdN-like tail assembly chaperone protein, TAC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08890
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF08890_Phage_XkdN-like_tail_assembly_chaperone_protein,_TAC


id: PF09290
description: Prokaryotic acetaldehyde dehydrogenase, dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09290
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09290_Prokaryotic_acetaldehyde_dehydrogenase,_dimerisation


id: PF09296
description: NADH pyrophosphatase-like rudimentary NUDIX domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09296
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09296_NADH_pyrophosphatase-like_rudimentary_NUDIX_domain


id: PF09338
description: Glycine/sarcosine/betaine reductase component B subunits
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09338
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09338_Glycine/sarcosine/betaine_reductase_component_B_subunits


id: PF09388
description: Spo0E like sporulation regulatory protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09388
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09388_Spo0E_like_sporulation_regulatory_protein


id: PF09439
description: Signal recognition particle receptor beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09439
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09439_Signal_recognition_particle_receptor_beta_subunit


id: PF09479
description: Listeria-Bacteroides repeat domain (List_Bact_rpt)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09479
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09479_Listeria-Bacteroides_repeat_domain_(List_Bact_rpt)


id: PF09527
description: Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09527
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09527_Putative_F0F1-ATPase_subunit_Ca2+/Mg2+_transporter


id: PF09546
description: Stage III sporulation protein AE (spore_III_AE)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09546
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09546_Stage_III_sporulation_protein_AE_(spore_III_AE)


id: PF09548
description: Stage III sporulation protein AB (spore_III_AB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09548
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09548_Stage_III_sporulation_protein_AB_(spore_III_AB)


id: PF09551
description: Stage II sporulation protein R (spore_II_R)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09551
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09551_Stage_II_sporulation_protein_R_(spore_II_R)


id: PF09581
description: Stage III sporulation protein AF (Spore_III_AF)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09581
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09581_Stage_III_sporulation_protein_AF_(Spore_III_AF)


id: PF09605
description: Hypothetical bacterial integral membrane protein (Trep_Strep)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09605
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09605_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)


id: PF09664
description: Protein of unknown function C-terminus (DUF2399)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09664
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09664_Protein_of_unknown_function_C-terminus_(DUF2399)


id: PF09669
description: Phage regulatory protein Rha (Phage_pRha)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09669
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09669_Phage_regulatory_protein_Rha_(Phage_pRha)


id: PF09693
description: Phage uncharacterised protein (Phage_XkdX)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09693
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09693_Phage_uncharacterised_protein_(Phage_XkdX)


id: PF09719
description: Putative redox-active protein (C_GCAxxG_C_C)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09719
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09719_Putative_redox-active_protein_(C_GCAxxG_C_C)


id: PF09876
description: Predicted metal-binding protein (DUF2103)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09876
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09876_Predicted_metal-binding_protein_(DUF2103)


id: PF09932
description: Uncharacterized conserved protein (DUF2164)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09932
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09932_Uncharacterized_conserved_protein_(DUF2164)


id: PF09954
description: Uncharacterized protein conserved in bacteria (DUF2188)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09954
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09954_Uncharacterized_protein_conserved_in_bacteria_(DUF2188)


id: PF09962
description: Uncharacterized conserved protein (DUF2196)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09962
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09962_Uncharacterized_conserved_protein_(DUF2196)


id: PF09966
description: Uncharacterized protein conserved in bacteria (DUF2200)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09966
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09966_Uncharacterized_protein_conserved_in_bacteria_(DUF2200)


id: PF09986
description: Uncharacterized protein conserved in bacteria (DUF2225)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09986
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09986_Uncharacterized_protein_conserved_in_bacteria_(DUF2225)


id: PF09989
description: CoA enzyme activase uncharacterised domain (DUF2229)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09989
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF09989_CoA_enzyme_activase_uncharacterised_domain_(DUF2229)


id: PF10031
description: Small integral membrane protein (DUF2273)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10031
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10031_Small_integral_membrane_protein_(DUF2273)


id: PF10035
description: Uncharacterized protein conserved in bacteria (DUF2179)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10035
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10035_Uncharacterized_protein_conserved_in_bacteria_(DUF2179)


id: PF10050
description: Predicted metal-binding protein (DUF2284)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10050
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10050_Predicted_metal-binding_protein_(DUF2284)


id: PF10066
description: Uncharacterized conserved protein (DUF2304)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10066
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10066_Uncharacterized_conserved_protein_(DUF2304)


id: PF10087
description: Uncharacterized protein conserved in bacteria (DUF2325)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10087
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10087_Uncharacterized_protein_conserved_in_bacteria_(DUF2325)


id: PF10105
description: Uncharacterized protein conserved in bacteria (DUF2344)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10105
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10105_Uncharacterized_protein_conserved_in_bacteria_(DUF2344)


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10418
description: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10418
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10418_Iron-sulfur_cluster_binding_domain_of_dihydroorotate_dehydrogenase_B


id: PF10518
description: TAT (twin-arginine translocation) pathway signal sequence
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10518
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10518_TAT_(twin-arginine_translocation)_pathway_signal_sequence


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10719
description: Late competence development protein ComFB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10719
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10719_Late_competence_development_protein_ComFB


id: PF10722
description: Putative bacterial sensory transduction regulator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10722
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF10722_Putative_bacterial_sensory_transduction_regulator


id: PF11490
description: DNA polymerase III polC-type N-terminus II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11490
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF11490_DNA_polymerase_III_polC-type_N-terminus_II


id: PF11796
description: Protein of unknown function N-terminus (DUF3323)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11796
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF11796_Protein_of_unknown_function_N-terminus_(DUF3323)


id: PF12139
description: Adenosine-5-phosphosulfate reductase beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12139
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12139_Adenosine-5-phosphosulfate_reductase_beta_subunit


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12176
description: Methanol-cobalamin methyltransferase B subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12176
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12176_Methanol-cobalamin_methyltransferase_B_subunit


id: PF12255
description: Insecticide toxin TcdB middle/C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12255
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12255_Insecticide_toxin_TcdB_middle/C-terminal_region


id: PF12256
description: Insecticide toxin TcdB middle/N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12256
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12256_Insecticide_toxin_TcdB_middle/N-terminal_region


id: PF12399
description: Branched-chain amino acid ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12399
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12399_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: PF12437
description: Glutamine synthetase type III N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12437
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12437_Glutamine_synthetase_type_III_N_terminal_


id: PF12459
description: D-Ala-teichoic acid biosynthesis protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12459
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12459_D-Ala-teichoic_acid_biosynthesis_protein


id: PF12623
description: RNA repair, ligase-Pnkp-associating, region of Hen1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12623
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12623_RNA_repair,_ligase-Pnkp-associating,_region_of_Hen1


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12729
description: Four helix bundle sensory module for signal transduction
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12729
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12729_Four_helix_bundle_sensory_module_for_signal_transduction


id: PF12806
description: Acetyl-CoA dehydrogenase C-terminal like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12806
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12806_Acetyl-CoA_dehydrogenase_C-terminal_like


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF12974
description: ABC transporter, phosphonate, periplasmic substrate-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12974
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF12974_ABC_transporter,_phosphonate,_periplasmic_substrate-binding_protein_


id: PF13005
description: Zinc-finger binding domain of transposase IS66
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13005
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13005_Zinc-finger_binding_domain_of_transposase_IS66_


id: PF13022
description: Helix-turn-helix of insertion element transposase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13022
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13022_Helix-turn-helix_of_insertion_element_transposase


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13243
description: Squalene-hopene cyclase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13243
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13243_Squalene-hopene_cyclase_C-terminal_domain


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13336
description: Acetyl-CoA hydrolase/transferase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13336
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13336_Acetyl-CoA_hydrolase/transferase_C-terminal_domain


id: PF13370
description: 4Fe-4S single cluster domain of Ferredoxin I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13370
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13370_4Fe-4S_single_cluster_domain_of_Ferredoxin_I


id: PF13386
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13386
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13386_Cytochrome_C_biogenesis_protein_transmembrane_region_


id: PF13416
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13416
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13416_Bacterial_extracellular_solute-binding_protein


id: PF13491
description: 4TM region of DNA translocase FtsK/SpoIIIE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13491
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13491_4TM_region_of_DNA_translocase_FtsK/SpoIIIE


id: PF13495
description: Phage integrase, N-terminal SAM-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13495
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13495_Phage_integrase,_N-terminal_SAM-like_domain


id: PF13510
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13510
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13510_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13536
description: Putative multidrug resistance efflux transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13536
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13536_Putative_multidrug_resistance_efflux_transporter


id: PF13540
description: Regulator of chromosome condensation (RCC1) repeat
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13540
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13540_Regulator_of_chromosome_condensation_(RCC1)_repeat


id: PF13588
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13588
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13588_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF13597
description: Anaerobic ribonucleoside-triphosphate reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13597
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13597_Anaerobic_ribonucleoside-triphosphate_reductase


id: PF13607
description: Succinyl-CoA ligase like flavodoxin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13607
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13607_Succinyl-CoA_ligase_like_flavodoxin_domain


id: PF13653
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13653
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13653_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF13655
description: N-terminal domain of reverse transcriptase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13655
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13655_N-terminal_domain_of_reverse_transcriptase


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13675
description: Type IV pili methyl-accepting chemotaxis transducer N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13675
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13675_Type_IV_pili_methyl-accepting_chemotaxis_transducer_N-term


id: PF13677
description: Membrane MotB of proton-channel complex MotA/MotB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13677
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13677_Membrane_MotB_of_proton-channel_complex_MotA/MotB_


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13807
description: G-rich domain on putative tyrosine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13807
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13807_G-rich_domain_on_putative_tyrosine_kinase


id: PF13975
description: Gag-polyprotein putative aspartyl protease
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13975
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF13975_Gag-polyprotein_putative_aspartyl_protease


id: PF14196
description: L-2-amino-thiazoline-4-carboxylic acid hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14196
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14196_L-2-amino-thiazoline-4-carboxylic_acid_hydrolase


id: PF14262
description: Carbohydrate-binding domain-containing protein Cthe_2159
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14262
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14262_Carbohydrate-binding_domain-containing_protein_Cthe_2159


id: PF14266
description: Putative component of biosynthetic module
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14266
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14266_Putative_component_of_biosynthetic_module


id: PF14361
description: RsbT co-antagonist protein rsbRD N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14361
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14361_RsbT_co-antagonist_protein_rsbRD_N-terminal_domain


id: PF14480
description: DNA polymerase III polC-type N-terminus I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14480
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14480_DNA_polymerase_III_polC-type_N-terminus_I


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14689
description: Sensor_kinase_SpoOB-type, alpha-helical domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14689
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14689_Sensor_kinase_SpoOB-type,_alpha-helical_domain


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14720
description: NiFe/NiFeSe hydrogenase small subunit C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14720
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14720_NiFe/NiFeSe_hydrogenase_small_subunit_C-terminal


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14827
description: Double sensory domain of two-component sensor kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14827
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14827_Double_sensory_domain_of_two-component_sensor_kinase


id: PF14833
description: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14833
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF14833_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase


id: PF15714
description: Stage V sporulation protein T C-terminal, transcription factor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15714
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF15714_Stage_V_sporulation_protein_T_C-terminal,_transcription_factor


id: PF15919
description: HicB_like antitoxin of bacterial toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15919
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF15919_HicB_like_antitoxin_of_bacterial_toxin-antitoxin_system


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16321
description: Sigma 54 modulation/S30EA ribosomal protein C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16321
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16321_Sigma_54_modulation/S30EA_ribosomal_protein_C_terminus


id: PF16491
description: CAAX prenyl protease N-terminal, five membrane helices
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16491
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16491_CAAX_prenyl_protease_N-terminal,_five_membrane_helices


id: PF16536
description: PNKP adenylyltransferase domain, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16536
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16536_PNKP_adenylyltransferase_domain,_C-terminal_region


id: PF16542
description: PNKP adenylyltransferase domain, ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16542
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16542_PNKP_adenylyltransferase_domain,_ligase_domain


id: PF16576
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16576
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16576_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16654
description: Diaminopimelic acid dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16654
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16654_Diaminopimelic_acid_dehydrogenase_C-terminal_domain


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF16924
description: Dipicolinate synthase subunit A N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16924
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16924_Dipicolinate_synthase_subunit_A_N-terminal_domain


id: PF16927
description: N-terminal 7TM region of histidine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16927
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16927_N-terminal_7TM_region_of_histidine_kinase


id: PF16983
description: Molybdate transporter of MFS superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16983
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF16983_Molybdate_transporter_of_MFS_superfamily


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17147
description: Pyruvate:ferredoxin oxidoreductase core domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17147
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF17147_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: PF17167
description: Glycosyl hydrolase 36 superfamily, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17167
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF17167_Glycosyl_hydrolase_36_superfamily,_catalytic_domain


id: PF17284
description: Spermidine synthase tetramerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17284
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF17284_Spermidine_synthase_tetramerisation_domain


id: PF17481
description: Phage tail sheath protein beta-sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17481
name:
  Protein Domains (Pfam).STRING_v12.0_768710_STRINGid_PF17481_Phage_tail_sheath_protein_beta-sandwich_domain


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00226
description: Low molecular weight phosphatase family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00260
description: Two component signalling adaptor domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00260
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00260_Two_component_signalling_adaptor_domain


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00346
description: Helix_turn_helix isocitrate lyase regulation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00346
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00346_Helix_turn_helix_isocitrate_lyase_regulation


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00393
description: Putative single-stranded nucleic acids-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00393
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00393_Putative_single-stranded_nucleic_acids-binding_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00460
description: Transglutaminase/protease-like homologues
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00460
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00460_Transglutaminase/protease-like_homologues


id: SM00464
description: Found in ATP-dependent protease La (LON)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00464
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00464_Found_in_ATP-dependent_protease_La_(LON)


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00559
description: Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00559
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00559_Ku70_and_Ku80_are_70kDa_and_80kDa_subunits_of_the_Lupus_Ku_autoantigen


id: SM00562
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00722
description: Domain present in carbohydrate binding proteins and sugar hydrolses
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00722
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00722_Domain_present_in_carbohydrate_binding_proteins_and_sugar_hydrolses


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00770
description: Zinc dependent phospholipase C (alpha toxin)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00770
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00770_Zinc_dependent_phospholipase_C_(alpha_toxin)


id: SM00790
description: Aldehyde ferredoxin oxidoreductase, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00790
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00790_Aldehyde_ferredoxin_oxidoreductase,_N-terminal_domain


id: SM00833
description: Cobalamin synthesis protein cobW C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00833
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00833_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00854
description: Bacterial capsule synthesis protein PGA_cap
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00854
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00854_Bacterial_capsule_synthesis_protein_PGA_cap


id: SM00858
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00866
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00866
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00866_The_UbiC_transcription_regulator-associated_(UTRA)_domain_is_a_conserved_ligand-binding_domain_that_has_a_similar_fold_to_PUBMED:12757941._It_is_believed_to_modulate_activity_of_bacterial_transcription_factors_in_response_to_binding_small_molecules.

description:
  The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to PUBMED:12757941. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00877
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00877
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00877_Bacterial_microcompartments_are_primitive_organelles_composed_entirely_of_protein_subunits._The_prototypical_bacterial_microcompartment_is_the_carboxysome,_a_protein_shell_for_sequestering_carbon_fixation_reactions._These_proteins_for_hexameric_...

description:
  Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric ...


id: SM00895
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00895
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00895_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00898
description: Formamidopyrimidine-DNA glycosylase N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00898
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00898_Formamidopyrimidine-DNA_glycosylase_N-terminal_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00900
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00900
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00900_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: SM00901
description: This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00901
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00901_This_domain_contains_a_conserved_N-terminal_(F/Y)RG_motif._It_is_functionally_uncharacterised.


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00930
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00930
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00930_This_domain_is_found_at_the_C-terminus_of_ABC_transporter_proteins_involved_in_D-methionine_transport_as_well_as_a_number_of_ferredoxin-like_proteins._This_domain_is_likely_to_act_as_a_substrate_binding_domain._The_domain_has_been_named_after_a_...

description:
  This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a ...


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00936
description: Penicillin-binding protein 5, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00936
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00936_Penicillin-binding_protein_5,_C-terminal_domain


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00941
description: Pyrimidine nucleoside phosphorylase C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00941
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00941_Pyrimidine_nucleoside_phosphorylase_C-terminal_domain


id: SM00953
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00953
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00953_This_presumed_protein_contains_3_highly_conserved_polar_groups_that_could_form_an_active_site._These_are_an_arginine,_glutamate_and_serine,_hence_the_RES_domain._RES_is_found_widely_distributed_in_bacteria,_it_has_about_150_residues_in_length.

description:
  This presumed protein contains 3 highly conserved polar groups that could form an active site. These are an arginine, glutamate and serine, hence the RES domain. RES is found widely distributed in bacteria, it has about 150 residues in length.


id: SM00956
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00974
description: This entry represents the putative helicase A859L PUBMED:11897024.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00974
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00974_This_entry_represents_the_putative_helicase_A859L_PUBMED:11897024.


id: SM00981
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00982
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00983
description: Thiamin pyrophosphokinase, vitamin B1 binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00983
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00983_Thiamin_pyrophosphokinase,_vitamin_B1_binding_domain


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00989
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00989
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00989_The_V4R_(vinyl_4_reductase)_domain_is_a_predicted_small_molecular_binding_domain,_that_may_bind_to_hydrocarbons.

description:
  The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons.


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01008
description: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01008
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01008_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain


id: SM01012
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01012
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01012_ANTAR_(AmiR_and_NasR_transcription_antitermination_regulators)_is_an_RNA-binding_domain_found_in_bacterial_transcription_antitermination_regulatory_proteins._The_majority_of_the_domain_consists_of_a_coiled-coil.

description:
  ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.


id: SM01022
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01022
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01022_The_ASCH_domain_adopts_a_beta-barrel_fold_similar_to_that_of_the_PUA_domain._It_is_thought_to_function_as_an_RNA-binding_domain_during_coactivation,_RNA-processing_and_possibly_during_prokaryotic_translation_regulation_PUBMED:16322048.

description:
  The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain. It is thought to function as an RNA-binding domain during coactivation, RNA-processing and possibly during prokaryotic translation regulation PUBMED:16322048.


id: SM01043
description: Bacterial transcriptional activator domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01043
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01043_Bacterial_transcriptional_activator_domain


id: SM01049
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01049
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01049_Cache_is_an_extracellular_domain_that_is_predicted_to_have_a_role_in_small-molecule_recognition_in_a_wide_range_of_proteins,_including_the_animal_dihydropyridine-sensitive_voltage-gated_Ca2+_channel

description:
  Cache is an extracellular domain that is predicted to have a role in small-molecule recognition in a wide range of proteins, including the animal dihydropyridine-sensitive voltage-gated Ca2+ channel


id: SM01060
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01060
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01060_Catalases_are_antioxidant_enzymes_that_catalyse_the_conversion_of_hydrogen_peroxide_to_water_and_molecular_oxygen,_serving_to_protect_cells_from_its_toxic_effects_PUBMED:11351128._Hydrogen_peroxide_is_produced_as_a_consequence_of_oxidative_cellular_...

description:
  Catalases are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects PUBMED:11351128. Hydrogen peroxide is produced as a consequence of oxidative cellular ...


id: SM01078
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01078
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01078_This_putative_domain_contains_a_quite_highly_conserved_sequence_of_CGGC_in_its_central_region._The_domain_has_many_conserved_cysteines_and_histidines_suggestive_of_a_zinc_binding_function.

description:
  This putative domain contains a quite highly conserved sequence of CGGC in its central region. The domain has many conserved cysteines and histidines suggestive of a zinc binding function.


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01092
description: CO dehydrogenase flavoprotein C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01092
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01092_CO_dehydrogenase_flavoprotein_C-terminal_domain


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01103
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01103
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01103_Escherichia_coli_YhbY_is_associated_with_pre-50S_ribosomal_subunits,_which_implies_a_function_in_ribosome_assembly._GFP_fused_to_a_single-domain_CRM_protein_from_maize_localises_to_the_nucleolus,_suggesting_that_an_analogous_activity_may_have_been_...

description:
  Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been ...


id: SM01120
description: This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01120
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01120_This_domain_is_the_predicted_phosphatase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01121
description: This is the kinase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01121
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01121_This_is_the_kinase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01131
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01131
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01131_This_domain_is_often_found_adjacent_to_the_DHH_domain_PF01368_and_is_called_DHHA2_for_DHH_associated_domain._This_domain_is_diagnostic_of_DHH_subfamily_2_members_(PUBMED:9478130)._The_domain_is_about_120_residues_long_and_contains_a_conserved_DXK_...

description:
  This domain is often found adjacent to the DHH domain PF01368 and is called DHHA2 for DHH associated domain. This domain is diagnostic of DHH subfamily 2 members (PUBMED:9478130). The domain is about 120 residues long and contains a conserved DXK ...


id: SM01142
description: This C terminal domain is found in DOB1/SK12/helY-like DEAD box helicases [PUBMED:15112237].
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01142
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01142_This_C_terminal_domain_is_found_in_DOB1/SK12/helY-like_DEAD_box_helicases_[PUBMED:15112237].


id: SM01208
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01208
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01208_This_domain_is_found_in_a_wide_range_of_extracellular_proteins._It_is_found_tandemly_repeated_in_up_to_8_copies._It_is_found_in_the_N-terminus_of_peptidases_belonging_to_the_M26_family_which_cleave_human_IgA._The_domain_is_also_found_in_proteins_...

description:
  This domain is found in a wide range of extracellular proteins. It is found tandemly repeated in up to 8 copies. It is found in the N-terminus of peptidases belonging to the M26 family which cleave human IgA. The domain is also found in proteins ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01222
description: Formiminotransferase domain, N-terminal subdomain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01222
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01222_Formiminotransferase_domain,_N-terminal_subdomain


id: SM01231
description: Signal transducing histidine kinase, homodimeric domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01231
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01231_Signal_transducing_histidine_kinase,_homodimeric_domain


id: SM01232
description: Formamidopyrimidine-DNA glycosylase H2TH domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01232
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01232_Formamidopyrimidine-DNA_glycosylase_H2TH_domain


id: SM01234
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01245
description: This domain is found at the N-terminus of jag proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01245
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01245_This_domain_is_found_at_the_N-terminus_of_jag_proteins.


id: SM01252
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01252
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01252_Conserved_DNA-binding_domain_that_is_found_in_a_wide_range_of_proteins_of_large_bacterial_and_eukaryotic_DNA_viruses.

description:
  Conserved DNA-binding domain that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01432
description: PD-(D/E)XK nuclease transposase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01432
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01432_PD-(D/E)XK_nuclease_transposase_sub-family


id: SM01433
description: PD-(D/E)XK nuclease transposase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01433
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01433_PD-(D/E)XK_nuclease_transposase_sub-family


id: SM01473
description: HUH conjugative element mobility domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01473
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01473_HUH_conjugative_element_mobility_domain


id: SM01477
description: DDE transposase retroviral integrase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01477
name:
  Protein Domains (SMART).STRING_v12.0_768710_STRINGid_SM01477_DDE_transposase_retroviral_integrase_sub-family


