# geneInfo

ensembl_gene_id: DesyoDRAFT_0001
symbol: rpmH
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; manually curated; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: DesyoDRAFT_0002
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: DesyoDRAFT_0003
symbol: EHQ87241.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: DesyoDRAFT_0004
symbol: recF
gene_biotype: protein_coding
description:
  recF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: DesyoDRAFT_0006
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: DesyoDRAFT_0007
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: DesyoDRAFT_0008
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: DesyoDRAFT_0009
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: DesyoDRAFT_0010
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: DesyoDRAFT_0014
symbol: tadA
gene_biotype: protein_coding
description:
  Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: DesyoDRAFT_0019
symbol: EHQ87253.1
gene_biotype: protein_coding
description:
  Putative signal transduction protein containing EAL and modified HD-GYP domains; PFAM: EAL domain; HDOD domain.


ensembl_gene_id: DesyoDRAFT_0025
symbol: EHQ87259.1
gene_biotype: protein_coding
description:
  Putative regulator of cell autolysis; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_0026
symbol: EHQ87260.1
gene_biotype: protein_coding
description:
  Response regulator containing CheY-like receiver and SARP domains; PFAM: Response regulator receiver domain; Bacterial transcriptional activator domain.


ensembl_gene_id: DesyoDRAFT_0030
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: DesyoDRAFT_0031
symbol: EHQ87263.1
gene_biotype: protein_coding
description:
  DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: DesyoDRAFT_0032
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: DesyoDRAFT_0033
symbol: EHQ87265.1
gene_biotype: protein_coding
description:
  Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.


ensembl_gene_id: DesyoDRAFT_0034
symbol: EHQ87266.1
gene_biotype: protein_coding
description:
  PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA.


ensembl_gene_id: DesyoDRAFT_0037
symbol: EHQ87269.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.


ensembl_gene_id: DesyoDRAFT_0038
symbol: EHQ87270.1
gene_biotype: protein_coding
description:
  PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family.


ensembl_gene_id: DesyoDRAFT_0044
symbol: EHQ87276.1
gene_biotype: protein_coding
description:
  Germination protein, Ger(X)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.


ensembl_gene_id: DesyoDRAFT_0050
symbol: rsmI
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: DesyoDRAFT_0052
symbol: metG
gene_biotype: protein_coding
description:
  Protein containing beta chain of methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: DesyoDRAFT_0058
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: DesyoDRAFT_0059
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: DesyoDRAFT_0064
symbol: EHQ87296.1
gene_biotype: protein_coding
description:
  Cyanophycinase; PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; Belongs to the peptidase S51 family.


ensembl_gene_id: DesyoDRAFT_0065
symbol: EHQ87297.1
gene_biotype: protein_coding
description:
  Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase; Belongs to the MurCDEF family.


ensembl_gene_id: DesyoDRAFT_0066
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: DesyoDRAFT_0068
symbol: EHQ87300.1
gene_biotype: protein_coding
description:
  Pur operon repressor; PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; xanthine phosphoribosyltransferase.


ensembl_gene_id: DesyoDRAFT_0069
symbol: spoVG
gene_biotype: protein_coding
description:
  Uncharacterized protein, involved in the regulation of septum location; Could be involved in septation.


ensembl_gene_id: DesyoDRAFT_0070
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: DesyoDRAFT_0071
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: DesyoDRAFT_0073
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: DesyoDRAFT_0075
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor Mfd; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: DesyoDRAFT_0077
symbol: EHQ87309.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein T; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T.


ensembl_gene_id: DesyoDRAFT_0078
symbol: EHQ87310.1
gene_biotype: protein_coding
description:
  MazG family protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.


ensembl_gene_id: DesyoDRAFT_0079
symbol: EHQ87311.1
gene_biotype: protein_coding
description:
  Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: DesyoDRAFT_0087
symbol: fhs
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate synthetase; PFAM: Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: DesyoDRAFT_0088
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: DesyoDRAFT_0089
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: DesyoDRAFT_0090
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: DesyoDRAFT_0095
symbol: EHQ87327.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: DesyoDRAFT_0096
symbol: EHQ87328.1
gene_biotype: protein_coding
description:
  PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.


ensembl_gene_id: DesyoDRAFT_0098
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: DesyoDRAFT_0099
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate-alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: DesyoDRAFT_0100
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: DesyoDRAFT_0102
symbol: EHQ87334.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.


ensembl_gene_id: DesyoDRAFT_0103
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: DesyoDRAFT_0104
symbol: EHQ87336.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: DesyoDRAFT_0105
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: DesyoDRAFT_0106
symbol: lysS
gene_biotype: protein_coding
description:
  lysyl-tRNA synthetase (class II); PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: DesyoDRAFT_0119
symbol: EHQ87346.1
gene_biotype: protein_coding
description:
  Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_0152
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: DesyoDRAFT_0154
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: DesyoDRAFT_0156
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: DesyoDRAFT_0157
symbol: rpmI
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: DesyoDRAFT_0158
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: DesyoDRAFT_0159
symbol: EHQ87360.1
gene_biotype: protein_coding
description:
  PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: DesyoDRAFT_0160
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0161
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0162
symbol: EHQ87363.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: DesyoDRAFT_0164
symbol: EHQ87365.1
gene_biotype: protein_coding
description:
  PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DesyoDRAFT_0165
symbol: EHQ87366.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, periplasmic component; PFAM: ABC transporter substrate binding protein.


ensembl_gene_id: DesyoDRAFT_0167
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: DesyoDRAFT_0168
symbol: EHQ87369.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.


ensembl_gene_id: DesyoDRAFT_0170
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0178
symbol: EHQ87375.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: DesyoDRAFT_0182
symbol: EHQ87379.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; PFAM: PEP-utilising enzyme, mobile domain.


ensembl_gene_id: DesyoDRAFT_0187
symbol: EHQ87384.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: 2-oxopent-4-enoate hydratase.


ensembl_gene_id: DesyoDRAFT_0188
symbol: EHQ87385.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: DesyoDRAFT_0189
symbol: EHQ87386.1
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: DesyoDRAFT_0190
symbol: EHQ87387.1
gene_biotype: protein_coding
description:
  Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: BFD-like [2Fe-2S] binding domain.


ensembl_gene_id: DesyoDRAFT_0193
symbol: EHQ87390.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain.


ensembl_gene_id: DesyoDRAFT_0197
symbol: larC
gene_biotype: protein_coding
description:
  TIGR00299 family protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: DesyoDRAFT_0201
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: DesyoDRAFT_0202
symbol: EHQ87399.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: DesyoDRAFT_0203
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: DesyoDRAFT_0204
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: DesyoDRAFT_0209
symbol: EHQ87406.1
gene_biotype: protein_coding
description:
  FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.


ensembl_gene_id: DesyoDRAFT_0213
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: DesyoDRAFT_0216
symbol: EHQ87413.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: DesyoDRAFT_0225
symbol: EHQ87422.1
gene_biotype: protein_coding
description:
  PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR); Belongs to the CtsR family.


ensembl_gene_id: DesyoDRAFT_0228
symbol: EHQ87425.1
gene_biotype: protein_coding
description:
  ATPase with chaperone activity, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; Belongs to the ClpA/ClpB family.


ensembl_gene_id: DesyoDRAFT_0229
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: DesyoDRAFT_0233
symbol: EHQ87430.1
gene_biotype: protein_coding
description:
  PFAM: SirA-like protein; TIGRFAM: selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: DesyoDRAFT_0235
symbol: EHQ87432.1
gene_biotype: protein_coding
description:
  PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: HesB-like selenoprotein; Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.


ensembl_gene_id: DesyoDRAFT_0238
symbol: EHQ87435.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_0242
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: DesyoDRAFT_0243
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: DesyoDRAFT_0244
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: DesyoDRAFT_0246
symbol: cysS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: DesyoDRAFT_0247
symbol: mrnC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: DesyoDRAFT_0248
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: DesyoDRAFT_0249
symbol: EHQ87446.1
gene_biotype: protein_coding
description:
  rRNA methylase, putative, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: DesyoDRAFT_0250
symbol: EHQ87447.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-H factor; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor.


ensembl_gene_id: DesyoDRAFT_0253
symbol: rpmG
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; manually curated; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: DesyoDRAFT_0254
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: DesyoDRAFT_0255
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: DesyoDRAFT_0256
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: DesyoDRAFT_0257
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: DesyoDRAFT_0258
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: DesyoDRAFT_0259
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: DesyoDRAFT_0260
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: DesyoDRAFT_0261
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: DesyoDRAFT_0263
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12, bacterial/organelle; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: DesyoDRAFT_0264
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7, bacterial/organelle; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: DesyoDRAFT_0265
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...]


ensembl_gene_id: DesyoDRAFT_0266
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor TU; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: DesyoDRAFT_0267
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10, bacterial/organelle; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: DesyoDRAFT_0268
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3, bacterial; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: DesyoDRAFT_0270
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: DesyoDRAFT_0271
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2, bacterial/organellar; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: DesyoDRAFT_0272
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19, bacterial/organelle; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: DesyoDRAFT_0273
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22, bacterial type; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: DesyoDRAFT_0274
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3, bacterial type; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: DesyoDRAFT_0275
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16, bacterial/organelle; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: DesyoDRAFT_0276
symbol: rpmC
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: DesyoDRAFT_0277
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: DesyoDRAFT_0278
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14, bacterial/organelle; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: DesyoDRAFT_0279
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24, bacterial/organelle; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: DesyoDRAFT_0280
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: DesyoDRAFT_0281
symbol: rpsZ
gene_biotype: protein_coding
description:
  Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: DesyoDRAFT_0282
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: DesyoDRAFT_0283
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6, bacterial type; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: DesyoDRAFT_0284
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18, bacterial type; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: DesyoDRAFT_0285
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5, bacterial/organelle type; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: DesyoDRAFT_0287
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15, bacterial/organelle; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: DesyoDRAFT_0288
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: DesyoDRAFT_0289
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: DesyoDRAFT_0290
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0291
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: DesyoDRAFT_0292
symbol: rpmJ
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; manually curated; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: DesyoDRAFT_0293
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: DesyoDRAFT_0294
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: DesyoDRAFT_0295
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4, bacterial/organelle type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: DesyoDRAFT_0296
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: DesyoDRAFT_0298
symbol: truA
gene_biotype: protein_coding
description:
  Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: DesyoDRAFT_0299
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: DesyoDRAFT_0303
symbol: EHQ87498.1
gene_biotype: protein_coding
description:
  Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.


ensembl_gene_id: DesyoDRAFT_0306
symbol: EHQ87501.1
gene_biotype: protein_coding
description:
  Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; Belongs to the peptidase M20A family.


ensembl_gene_id: DesyoDRAFT_0307
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase, common form; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0308
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: DesyoDRAFT_0309
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: DesyoDRAFT_0310
symbol: argD
gene_biotype: protein_coding
description:
  PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: DesyoDRAFT_0311
symbol: carA
gene_biotype: protein_coding
description:
  PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.


ensembl_gene_id: DesyoDRAFT_0312
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit.


ensembl_gene_id: DesyoDRAFT_0314
symbol: EHQ87509.1
gene_biotype: protein_coding
description:
  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_0315
symbol: EHQ87510.1
gene_biotype: protein_coding
description:
  ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like.


ensembl_gene_id: DesyoDRAFT_0318
symbol: EHQ87513.1
gene_biotype: protein_coding
description:
  Putative regulatory ligand binding protein, C-terminal domain of K+ channels like protein; PFAM: TrkA-C domain.


ensembl_gene_id: DesyoDRAFT_0319
symbol: EHQ87514.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: DesyoDRAFT_0320
symbol: argG
gene_biotype: protein_coding
description:
  PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0322
symbol: EHQ87517.1
gene_biotype: protein_coding
description:
  Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: DesyoDRAFT_0323
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: DesyoDRAFT_0324
symbol: EHQ87519.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); Belongs to the 5'(3')-deoxyribonucleotidase family.


ensembl_gene_id: DesyoDRAFT_0326
symbol: EHQ87521.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); PFAM: Prokaryotic cytochrome b561.


ensembl_gene_id: DesyoDRAFT_0328
symbol: EHQ87523.1
gene_biotype: protein_coding
description:
  Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA).


ensembl_gene_id: DesyoDRAFT_0333
symbol: EHQ87527.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; N-acetylmuramoyl-L-alanine amidase.


ensembl_gene_id: DesyoDRAFT_0342
symbol: EHQ87536.1
gene_biotype: protein_coding
description:
  PFAM: Tetratricopeptide repeat; Glycosyl transferase family 2; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_0351
symbol: EHQ87545.1
gene_biotype: protein_coding
description:
  YVTN family beta-propeller repeat protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat.


ensembl_gene_id: DesyoDRAFT_0357
symbol: EHQ87551.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: DesyoDRAFT_0363
symbol: EHQ87557.1
gene_biotype: protein_coding
description:
  BclB C-terminal domain protein; PFAM: Collagen triple helix repeat (20 copies); TIGRFAM: BclB C-terminal domain.


ensembl_gene_id: DesyoDRAFT_0370
symbol: EHQ87564.1
gene_biotype: protein_coding
description:
  PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase.


ensembl_gene_id: DesyoDRAFT_0374
symbol: EHQ87568.1
gene_biotype: protein_coding
description:
  PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: DesyoDRAFT_0375
symbol: EHQ87569.1
gene_biotype: protein_coding
description:
  Uncharacterized protein with SCP/PR1 domains; PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family.


ensembl_gene_id: DesyoDRAFT_0378
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: DesyoDRAFT_0381
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: DesyoDRAFT_0382
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: DesyoDRAFT_0386
symbol: EHQ87579.1
gene_biotype: protein_coding
description:
  PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: DesyoDRAFT_0387
symbol: EHQ87580.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0389
symbol: EHQ87582.1
gene_biotype: protein_coding
description:
  Putative cobalamin binding protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family.


ensembl_gene_id: DesyoDRAFT_0392
symbol: EHQ87585.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.


ensembl_gene_id: DesyoDRAFT_0393
symbol: EHQ87586.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.


ensembl_gene_id: DesyoDRAFT_0394
symbol: EHQ87587.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_0395
symbol: EHQ87588.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_0398
symbol: EHQ87591.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: DesyoDRAFT_0400
symbol: EHQ87593.1
gene_biotype: protein_coding
description:
  PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase.


ensembl_gene_id: DesyoDRAFT_0405
symbol: EHQ87598.1
gene_biotype: protein_coding
description:
  PEP phosphonomutase-like enzyme; PFAM: Isocitrate lyase family; TIGRFAM: carboxyvinyl-carboxyphosphonate phosphorylmutase.


ensembl_gene_id: DesyoDRAFT_0407
symbol: EHQ87600.1
gene_biotype: protein_coding
description:
  PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: DesyoDRAFT_0408
symbol: EHQ87601.1
gene_biotype: protein_coding
description:
  PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: DesyoDRAFT_0415
symbol: speE-2
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: DesyoDRAFT_0416
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: DesyoDRAFT_0417
symbol: EHQ87610.1
gene_biotype: protein_coding
description:
  Membrane-associated lipoprotein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: DesyoDRAFT_0423
symbol: EHQ87616.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_0424
symbol: EHQ87617.1
gene_biotype: protein_coding
description:
  Methylase of chemotaxis methyl-accepting protein; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.


ensembl_gene_id: DesyoDRAFT_0425
symbol: EHQ87618.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_0426
symbol: EHQ87619.1
gene_biotype: protein_coding
description:
  nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region.


ensembl_gene_id: DesyoDRAFT_0427
symbol: EHQ87620.1
gene_biotype: protein_coding
description:
  PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: DesyoDRAFT_0428
symbol: EHQ87621.1
gene_biotype: protein_coding
description:
  PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit; TIGRFAM: N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H.


ensembl_gene_id: DesyoDRAFT_0429
symbol: EHQ87622.1
gene_biotype: protein_coding
description:
  PFAM: Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.


ensembl_gene_id: DesyoDRAFT_0430
symbol: EHQ87623.1
gene_biotype: protein_coding
description:
  PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family.


ensembl_gene_id: DesyoDRAFT_0435
symbol: EHQ87628.1
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; PFAM: Substrate binding domain of ABC-type glycine betaine transport system; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: DesyoDRAFT_0436
symbol: EHQ87629.1
gene_biotype: protein_coding
description:
  Putative cobalamin binding protein; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain.


ensembl_gene_id: DesyoDRAFT_0437
symbol: EHQ87630.1
gene_biotype: protein_coding
description:
  Putative sensor domain protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Predicted histidine kinase sensor domain.


ensembl_gene_id: DesyoDRAFT_0441
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: DesyoDRAFT_0442
symbol: EHQ87635.1
gene_biotype: protein_coding
description:
  OAH/OAS sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase.


ensembl_gene_id: DesyoDRAFT_0443
symbol: EHQ87636.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DesyoDRAFT_0454
symbol: EHQ87646.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family.


ensembl_gene_id: DesyoDRAFT_0461
symbol: EHQ87651.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family.


ensembl_gene_id: DesyoDRAFT_0463
symbol: EHQ87653.1
gene_biotype: protein_coding
description:
  Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.


ensembl_gene_id: DesyoDRAFT_0464
symbol: EHQ87654.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: DesyoDRAFT_0468
symbol: EHQ87658.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein.


ensembl_gene_id: DesyoDRAFT_0470
symbol: EHQ87660.1
gene_biotype: protein_coding
description:
  Mn-dependent transcriptional regulator; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.


ensembl_gene_id: DesyoDRAFT_0472
symbol: EHQ87662.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: DesyoDRAFT_0476
symbol: EHQ87666.1
gene_biotype: protein_coding
description:
  ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.


ensembl_gene_id: DesyoDRAFT_0478
symbol: EHQ87668.1
gene_biotype: protein_coding
description:
  ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit.


ensembl_gene_id: DesyoDRAFT_0479
symbol: amj
gene_biotype: protein_coding
description:
  Protein of unknown function (DUF2837); Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: DesyoDRAFT_0481
symbol: EHQ87671.1
gene_biotype: protein_coding
description:
  O-6-methylguanine DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: DesyoDRAFT_0482
symbol: EHQ87672.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.


ensembl_gene_id: DesyoDRAFT_0485
symbol: EHQ87675.1
gene_biotype: protein_coding
description:
  KamA family protein; PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein.


ensembl_gene_id: DesyoDRAFT_0487
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: DesyoDRAFT_0488
symbol: nnrE
gene_biotype: protein_coding
description:
  yjeF-like protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimer [...]


ensembl_gene_id: DesyoDRAFT_0489
symbol: EHQ87679.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: DesyoDRAFT_0491
symbol: EHQ87681.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl tripeptide synthase; PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain.


ensembl_gene_id: DesyoDRAFT_0493
symbol: EHQ87683.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain; PFAM: Ribbon-helix-helix protein, copG family.


ensembl_gene_id: DesyoDRAFT_0496
symbol: EHQ87686.1
gene_biotype: protein_coding
description:
  Periplasmic component of amino acid ABC-type transporter/signal transduction system; PFAM: Bacterial extracellular solute-binding proteins, family 3.


ensembl_gene_id: DesyoDRAFT_0497
symbol: EHQ87687.1
gene_biotype: protein_coding
description:
  PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.


ensembl_gene_id: DesyoDRAFT_0501
symbol: EHQ87691.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit.


ensembl_gene_id: DesyoDRAFT_0506
symbol: EHQ87696.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_0507
symbol: EHQ87697.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; manually curated; non-canonical start codon.


ensembl_gene_id: DesyoDRAFT_0509
symbol: EHQ87698.1
gene_biotype: protein_coding
description:
  ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.


ensembl_gene_id: DesyoDRAFT_0515
symbol: EHQ87704.1
gene_biotype: protein_coding
description:
  Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: DesyoDRAFT_0521
symbol: EHQ87710.1
gene_biotype: protein_coding
description:
  Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family; G5 domain; LysM domain.


ensembl_gene_id: DesyoDRAFT_0522
symbol: EHQ87711.1
gene_biotype: protein_coding
description:
  PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: DesyoDRAFT_0527
symbol: EHQ87716.1
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; PFAM: Putative rRNA methylase.


ensembl_gene_id: DesyoDRAFT_0531
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: DesyoDRAFT_0534
symbol: EHQ87720.1
gene_biotype: protein_coding
description:
  Threonine dehydratase, medium form; PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase, medium form.


ensembl_gene_id: DesyoDRAFT_0542
symbol: EHQ87724.1
gene_biotype: protein_coding
description:
  ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: DesyoDRAFT_0544
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: DesyoDRAFT_0551
symbol: EHQ87733.1
gene_biotype: protein_coding
description:
  Putative DNA-binding protein; PFAM: Protein of unknown function DUF134; Belongs to the UPF0251 family.


ensembl_gene_id: DesyoDRAFT_0556
symbol: EHQ87738.1
gene_biotype: protein_coding
description:
  Histidine kinase,HAMP domain-containing protein,histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_0562
symbol: EHQ87744.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, periplasmic component; PFAM: Uncharacterized protein conserved in bacteria (DUF2325).


ensembl_gene_id: DesyoDRAFT_0566
symbol: EHQ87748.1
gene_biotype: protein_coding
description:
  DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: Doubled CXXCH motif (Paired_CXXCH_1).


ensembl_gene_id: DesyoDRAFT_0569
symbol: EHQ87751.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.


ensembl_gene_id: DesyoDRAFT_0570
symbol: EHQ87752.1
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only.


ensembl_gene_id: DesyoDRAFT_0573
symbol: EHQ87755.1
gene_biotype: protein_coding
description:
  PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family.


ensembl_gene_id: DesyoDRAFT_0580
symbol: EHQ87762.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: DesyoDRAFT_0581
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: DesyoDRAFT_0586
symbol: EHQ87767.1
gene_biotype: protein_coding
description:
  L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: DesyoDRAFT_0591
symbol: EHQ87772.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: DesyoDRAFT_0592
symbol: tsaD
gene_biotype: protein_coding
description:
  Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: DesyoDRAFT_0593
symbol: EHQ87774.1
gene_biotype: protein_coding
description:
  5,10-methenyltetrahydrofolate synthetase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase.


ensembl_gene_id: DesyoDRAFT_0595
symbol: EHQ87776.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit.


ensembl_gene_id: DesyoDRAFT_0597
symbol: EHQ87777.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase, alpha subunit, archaeal-type; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; Contains selenocysteine; manually curated.


ensembl_gene_id: DesyoDRAFT_0599
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: DesyoDRAFT_0600
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: DesyoDRAFT_0601
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: DesyoDRAFT_0602
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: DesyoDRAFT_0606
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: DesyoDRAFT_0607
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: DesyoDRAFT_0610
symbol: EHQ87790.1
gene_biotype: protein_coding
description:
  PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: DesyoDRAFT_0612
symbol: EHQ87792.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase.


ensembl_gene_id: DesyoDRAFT_0615
symbol: EHQ87795.1
gene_biotype: protein_coding
description:
  Plasma-membrane calcium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; golgi membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.


ensembl_gene_id: DesyoDRAFT_0618
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: DesyoDRAFT_0619
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, PurE protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: DesyoDRAFT_0621
symbol: EHQ87801.1
gene_biotype: protein_coding
description:
  Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_0624
symbol: EHQ87804.1
gene_biotype: protein_coding
description:
  PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: DesyoDRAFT_0626
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: DesyoDRAFT_0627
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase.


ensembl_gene_id: DesyoDRAFT_0628
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: DesyoDRAFT_0629
symbol: purH
gene_biotype: protein_coding
description:
  PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.


ensembl_gene_id: DesyoDRAFT_0630
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; Belongs to the GARS family.


ensembl_gene_id: DesyoDRAFT_0636
symbol: EHQ87816.1
gene_biotype: protein_coding
description:
  PFAM: Ferrous iron transport protein B C terminus; Nucleoside recognition; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_0642
symbol: EHQ87822.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_0644
symbol: EHQ87824.1
gene_biotype: protein_coding
description:
  Lipoprotein, YaeC family; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: DesyoDRAFT_0645
symbol: EHQ87825.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_0646
symbol: metN
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: DesyoDRAFT_0648
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase, regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: DesyoDRAFT_0649
symbol: pfkA
gene_biotype: protein_coding
description:
  Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: DesyoDRAFT_0651
symbol: EHQ87830.1
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: pyrrolysyl-tRNA synthetase, C-terminal region; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: DesyoDRAFT_0652
symbol: EHQ87831.1
gene_biotype: protein_coding
description:
  Putative cobalamin binding protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; methylmalonyl-CoA mutase C-terminal domain.


ensembl_gene_id: DesyoDRAFT_0655
symbol: EHQ87833.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_0660
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: DesyoDRAFT_0661
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: DesyoDRAFT_0662
symbol: hisC
gene_biotype: protein_coding
description:
  PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: DesyoDRAFT_0664
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: DesyoDRAFT_0665
symbol: hisA
gene_biotype: protein_coding
description:
  PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.


ensembl_gene_id: DesyoDRAFT_0666
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: DesyoDRAFT_0667
symbol: hisI
gene_biotype: protein_coding
description:
  PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: DesyoDRAFT_0684
symbol: EHQ87861.1
gene_biotype: protein_coding
description:
  L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: DesyoDRAFT_0689
symbol: EHQ87866.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain.


ensembl_gene_id: DesyoDRAFT_0690
symbol: EHQ87867.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF401); TIGRFAM: converved hypothetical integral membrane protein.


ensembl_gene_id: DesyoDRAFT_0695
symbol: EHQ87872.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.


ensembl_gene_id: DesyoDRAFT_0697
symbol: EHQ87874.1
gene_biotype: protein_coding
description:
  Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF).


ensembl_gene_id: DesyoDRAFT_0705
symbol: EHQ87882.1
gene_biotype: protein_coding
description:
  Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; PFAM: Cytochrome c552; Belongs to the cytochrome c-552 family.


ensembl_gene_id: DesyoDRAFT_0706
symbol: EHQ87883.1
gene_biotype: protein_coding
description:
  PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit.


ensembl_gene_id: DesyoDRAFT_0707
symbol: EHQ87884.1
gene_biotype: protein_coding
description:
  Calcium/proton exchanger Cax; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.


ensembl_gene_id: DesyoDRAFT_0709
symbol: EHQ87886.1
gene_biotype: protein_coding
description:
  ABC-type transport system involved in Fe-S cluster assembly, permease component; PFAM: Uncharacterized protein family (UPF0051).


ensembl_gene_id: DesyoDRAFT_0710
symbol: EHQ87887.1
gene_biotype: protein_coding
description:
  ABC-type transport system involved in Fe-S cluster assembly, ATPase component; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.


ensembl_gene_id: DesyoDRAFT_0711
symbol: EHQ87888.1
gene_biotype: protein_coding
description:
  PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: DesyoDRAFT_0714
symbol: EHQ87891.1
gene_biotype: protein_coding
description:
  Trk-type K+ transport system, membrane component; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family.


ensembl_gene_id: DesyoDRAFT_0718
symbol: EHQ87895.1
gene_biotype: protein_coding
description:
  Tellurite resistance protein-like permease; PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein.


ensembl_gene_id: DesyoDRAFT_0721
symbol: EHQ87897.1
gene_biotype: protein_coding
description:
  Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.


ensembl_gene_id: DesyoDRAFT_0722
symbol: mqnB
gene_biotype: protein_coding
description:
  Futalosine nucleosidase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: DesyoDRAFT_0723
symbol: mqnD
gene_biotype: protein_coding
description:
  Putative periplasmic solute-binding protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: DesyoDRAFT_0733
symbol: EHQ87909.1
gene_biotype: protein_coding
description:
  Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V.


ensembl_gene_id: DesyoDRAFT_0736
symbol: EHQ87912.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain.


ensembl_gene_id: DesyoDRAFT_0748
symbol: msrB
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: DesyoDRAFT_0757
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: DesyoDRAFT_0759
symbol: EHQ87935.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase/carnithine racemase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: DesyoDRAFT_0761
symbol: EHQ87937.1
gene_biotype: protein_coding
description:
  PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: DesyoDRAFT_0762
symbol: EHQ87938.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: DesyoDRAFT_0764
symbol: EHQ87940.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.


ensembl_gene_id: DesyoDRAFT_0768
symbol: EHQ87944.1
gene_biotype: protein_coding
description:
  PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.


ensembl_gene_id: DesyoDRAFT_0769
symbol: EHQ87945.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit.


ensembl_gene_id: DesyoDRAFT_0770
symbol: EHQ87946.1
gene_biotype: protein_coding
description:
  PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA).


ensembl_gene_id: DesyoDRAFT_0771
symbol: EHQ87947.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family.


ensembl_gene_id: DesyoDRAFT_0773
symbol: EHQ87949.1
gene_biotype: protein_coding
description:
  Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.


ensembl_gene_id: DesyoDRAFT_0777
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: DesyoDRAFT_0778
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: DesyoDRAFT_0782
symbol: EHQ87957.1
gene_biotype: protein_coding
description:
  PFAM: HD domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; uncharacterized domain HDIG.


ensembl_gene_id: DesyoDRAFT_0786
symbol: EHQ87961.1
gene_biotype: protein_coding
description:
  PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.


ensembl_gene_id: DesyoDRAFT_0787
symbol: EHQ87962.1
gene_biotype: protein_coding
description:
  Response regulator with putative antiterminator output domain; PFAM: Response regulator receiver domain; ANTAR domain.


ensembl_gene_id: DesyoDRAFT_0790
symbol: ubiX
gene_biotype: protein_coding
description:
  Polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: DesyoDRAFT_0791
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: DesyoDRAFT_0792
symbol: EHQ87967.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.


ensembl_gene_id: DesyoDRAFT_0801
symbol: EHQ87976.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.


ensembl_gene_id: DesyoDRAFT_0806
symbol: EHQ87981.1
gene_biotype: protein_coding
description:
  Peptidase T-like protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein.


ensembl_gene_id: DesyoDRAFT_0807
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate and D-aspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: DesyoDRAFT_0808
symbol: EHQ87983.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family.


ensembl_gene_id: DesyoDRAFT_0812
symbol: EHQ87984.1
gene_biotype: protein_coding
description:
  Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: DesyoDRAFT_0813
symbol: EHQ87985.1
gene_biotype: protein_coding
description:
  PFAM: Putative sugar diacid recognition; Methyl-accepting chemotaxis protein (MCP) signaling domain.


ensembl_gene_id: DesyoDRAFT_0816
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: DesyoDRAFT_0817
symbol: EHQ87989.1
gene_biotype: protein_coding
description:
  Hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB.


ensembl_gene_id: DesyoDRAFT_0818
symbol: EHQ87990.1
gene_biotype: protein_coding
description:
  PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease.


ensembl_gene_id: DesyoDRAFT_0820
symbol: EHQ87992.1
gene_biotype: protein_coding
description:
  Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: DesyoDRAFT_0821
symbol: EHQ87993.1
gene_biotype: protein_coding
description:
  Hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA).


ensembl_gene_id: DesyoDRAFT_0822
symbol: EHQ87994.1
gene_biotype: protein_coding
description:
  (NiFe) hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF.


ensembl_gene_id: DesyoDRAFT_0825
symbol: EHQ87997.1
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE.


ensembl_gene_id: DesyoDRAFT_0832
symbol: EHQ88004.1
gene_biotype: protein_coding
description:
  Cysteine synthase A; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: DesyoDRAFT_0837
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: DesyoDRAFT_0838
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase, RuvA subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: DesyoDRAFT_0839
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase, RuvB subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: DesyoDRAFT_0841
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: DesyoDRAFT_0842
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase, queuosine-34-forming; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of  [...]


ensembl_gene_id: DesyoDRAFT_0846
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: DesyoDRAFT_0854
symbol: EHQ88026.1
gene_biotype: protein_coding
description:
  PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: DesyoDRAFT_0856
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: DesyoDRAFT_0857
symbol: EHQ88029.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase, RelA/SpoT family; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: DesyoDRAFT_0858
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: DesyoDRAFT_0860
symbol: hisS
gene_biotype: protein_coding
description:
  PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase.


ensembl_gene_id: DesyoDRAFT_0861
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_0866
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: DesyoDRAFT_0867
symbol: EHQ88039.1
gene_biotype: protein_coding
description:
  PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold protein NifU, Clostridium type.


ensembl_gene_id: DesyoDRAFT_0868
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: DesyoDRAFT_0872
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: DesyoDRAFT_0876
symbol: EHQ88048.1
gene_biotype: protein_coding
description:
  RNAse H-fold protein YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: DesyoDRAFT_0879
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein, YceG family; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: DesyoDRAFT_0880
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: DesyoDRAFT_0891
symbol: EHQ88063.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.


ensembl_gene_id: DesyoDRAFT_0892
symbol: EHQ88064.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-K factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: DesyoDRAFT_0893
symbol: EHQ88065.1
gene_biotype: protein_coding
description:
  HAD phosphatase subfamily IIIA; PFAM: Protein of unknown function; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668.


ensembl_gene_id: DesyoDRAFT_0894
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: DesyoDRAFT_0896
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: DesyoDRAFT_0897
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: DesyoDRAFT_0898
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: DesyoDRAFT_0903
symbol: EHQ88075.1
gene_biotype: protein_coding
description:
  Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.


ensembl_gene_id: DesyoDRAFT_0905
symbol: EHQ88077.1
gene_biotype: protein_coding
description:
  Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain.


ensembl_gene_id: DesyoDRAFT_0906
symbol: EHQ88078.1
gene_biotype: protein_coding
description:
  PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.


ensembl_gene_id: DesyoDRAFT_0907
symbol: EHQ88079.1
gene_biotype: protein_coding
description:
  Prepilin signal peptidase PulO-like peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: DesyoDRAFT_0911
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: DesyoDRAFT_0913
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: DesyoDRAFT_0914
symbol: rnj
gene_biotype: protein_coding
description:
  Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: DesyoDRAFT_0915
symbol: EHQ88087.1
gene_biotype: protein_coding
description:
  PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: DesyoDRAFT_0918
symbol: EHQ88090.1
gene_biotype: protein_coding
description:
  PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC.


ensembl_gene_id: DesyoDRAFT_0919
symbol: EHQ88091.1
gene_biotype: protein_coding
description:
  PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.


ensembl_gene_id: DesyoDRAFT_0924
symbol: EHQ88096.1
gene_biotype: protein_coding
description:
  Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.


ensembl_gene_id: DesyoDRAFT_0925
symbol: EHQ88097.1
gene_biotype: protein_coding
description:
  PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein.


ensembl_gene_id: DesyoDRAFT_0926
symbol: EHQ88098.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: DesyoDRAFT_0930
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: DesyoDRAFT_0931
symbol: EHQ88103.1
gene_biotype: protein_coding
description:
  2-polyprenylphenol hydroxylase-like oxidoreductase; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain.


ensembl_gene_id: DesyoDRAFT_0932
symbol: EHQ88104.1
gene_biotype: protein_coding
description:
  NADPH-dependent glutamate synthase, homotetrameric; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthase (NADPH), homotetrameric.


ensembl_gene_id: DesyoDRAFT_0933
symbol: folD
gene_biotype: protein_coding
description:
  5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: DesyoDRAFT_0937
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: DesyoDRAFT_0938
symbol: xseB
gene_biotype: protein_coding
description:
  Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: DesyoDRAFT_0939
symbol: EHQ88111.1
gene_biotype: protein_coding
description:
  Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: DesyoDRAFT_0941
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: DesyoDRAFT_0943
symbol: nadK
gene_biotype: protein_coding
description:
  Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: DesyoDRAFT_0947
symbol: EHQ88119.1
gene_biotype: protein_coding
description:
  Sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: DesyoDRAFT_0951
symbol: EHQ88123.1
gene_biotype: protein_coding
description:
  PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase.


ensembl_gene_id: DesyoDRAFT_0953
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: DesyoDRAFT_0954
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: DesyoDRAFT_0955
symbol: EHQ88127.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: DesyoDRAFT_0956
symbol: EHQ88128.1
gene_biotype: protein_coding
description:
  PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase.


ensembl_gene_id: DesyoDRAFT_0958
symbol: EHQ88130.1
gene_biotype: protein_coding
description:
  PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; Belongs to the peptidase S11 family.


ensembl_gene_id: DesyoDRAFT_0959
symbol: EHQ88131.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: DesyoDRAFT_0960
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: DesyoDRAFT_0961
symbol: EHQ88133.1
gene_biotype: protein_coding
description:
  PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: DesyoDRAFT_0969
symbol: EHQ88141.1
gene_biotype: protein_coding
description:
  Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.


ensembl_gene_id: DesyoDRAFT_0970
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: DesyoDRAFT_0971
symbol: EHQ88143.1
gene_biotype: protein_coding
description:
  PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.


ensembl_gene_id: DesyoDRAFT_0975
symbol: EHQ88147.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: DHH family; DHHA1 domain; CBS domain; Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: DesyoDRAFT_0977
symbol: EHQ88149.1
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: DesyoDRAFT_0978
symbol: scpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: DesyoDRAFT_0979
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: DesyoDRAFT_0986
symbol: EHQ88158.1
gene_biotype: protein_coding
description:
  PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.


ensembl_gene_id: DesyoDRAFT_0987
symbol: EHQ88159.1
gene_biotype: protein_coding
description:
  PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: DesyoDRAFT_0995
symbol: EHQ88167.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family.


ensembl_gene_id: DesyoDRAFT_0999
symbol: EHQ88171.1
gene_biotype: protein_coding
description:
  Monofunctional chorismate mutase, clade 1; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: DesyoDRAFT_1005
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: DesyoDRAFT_1006
symbol: EHQ88178.1
gene_biotype: protein_coding
description:
  Putative branched-chain amino acid permease (azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC.


ensembl_gene_id: DesyoDRAFT_1021
symbol: ispH
gene_biotype: protein_coding
description:
  (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: DesyoDRAFT_1024
symbol: EHQ88196.1
gene_biotype: protein_coding
description:
  Fe-S oxidoreductase; PFAM: Protein of unknown function (DUF512); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase.


ensembl_gene_id: DesyoDRAFT_1025
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: DesyoDRAFT_1026
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: DesyoDRAFT_1027
symbol: gpsA
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: DesyoDRAFT_1028
symbol: EHQ88200.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: DesyoDRAFT_1031
symbol: birA
gene_biotype: protein_coding
description:
  birA, biotin-(acetyl-CoA-carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: DesyoDRAFT_1033
symbol: ecfA
gene_biotype: protein_coding
description:
  ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: DesyoDRAFT_1035
symbol: EHQ88207.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: CBS domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_1036
symbol: EHQ88208.1
gene_biotype: protein_coding
description:
  birA, biotin-(acetyl-CoA-carboxylase) ligase; PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region.


ensembl_gene_id: DesyoDRAFT_1042
symbol: EHQ88214.1
gene_biotype: protein_coding
description:
  Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: DesyoDRAFT_1044
symbol: EHQ88216.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase domain.


ensembl_gene_id: DesyoDRAFT_1050
symbol: EHQ88222.1
gene_biotype: protein_coding
description:
  TRAP transporter, 4TM/12TM fusion protein; PFAM: FxsA cytoplasmic membrane protein; DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.


ensembl_gene_id: DesyoDRAFT_1056
symbol: EHQ88227.1
gene_biotype: protein_coding
description:
  SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: Helix-turn-helix; Peptidase S24-like.


ensembl_gene_id: DesyoDRAFT_1077
symbol: EHQ88248.1
gene_biotype: protein_coding
description:
  PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family.


ensembl_gene_id: DesyoDRAFT_1083
symbol: EHQ88254.1
gene_biotype: protein_coding
description:
  PFAM: C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: DesyoDRAFT_1087
symbol: EHQ88257.1
gene_biotype: protein_coding
description:
  PFAM: ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.


ensembl_gene_id: DesyoDRAFT_1104
symbol: EHQ88274.1
gene_biotype: protein_coding
description:
  PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.


ensembl_gene_id: DesyoDRAFT_1137
symbol: EHQ88307.1
gene_biotype: protein_coding
description:
  Negative regulator of beta-lactamase expression; PFAM: N-acetylmuramoyl-L-alanine amidase; Subtilase family.


ensembl_gene_id: DesyoDRAFT_1157
symbol: EHQ88327.1
gene_biotype: protein_coding
description:
  PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.


ensembl_gene_id: DesyoDRAFT_1159
symbol: EHQ88328.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: DesyoDRAFT_1160
symbol: EHQ88329.1
gene_biotype: protein_coding
description:
  ABC-type phosphate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_1161
symbol: pstB
gene_biotype: protein_coding
description:
  ABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: DesyoDRAFT_1162
symbol: EHQ88331.1
gene_biotype: protein_coding
description:
  Short-chain alcohol dehydrogenase like protein; Dehydrogenase of unknown specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: DesyoDRAFT_1163
symbol: EHQ88332.1
gene_biotype: protein_coding
description:
  Uncharacterized protein with SCP/PR1 domains; PFAM: Cysteine-rich secretory protein family; Rhodanese-like domain; TIGRFAM: uncharacterized protein, YkwD family.


ensembl_gene_id: DesyoDRAFT_1168
symbol: EHQ88337.1
gene_biotype: protein_coding
description:
  Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: DesyoDRAFT_1174
symbol: EHQ88342.1
gene_biotype: protein_coding
description:
  Putative stress response protein, TerZ- and CABP1; PFAM: Tellurium resistance protein; Bacterial stress protein.


ensembl_gene_id: DesyoDRAFT_1177
symbol: EHQ88345.1
gene_biotype: protein_coding
description:
  Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.


ensembl_gene_id: DesyoDRAFT_1180
symbol: EHQ88348.1
gene_biotype: protein_coding
description:
  Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus.


ensembl_gene_id: DesyoDRAFT_1181
symbol: EHQ88349.1
gene_biotype: protein_coding
description:
  Ni,Fe-hydrogenase III large subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase.


ensembl_gene_id: DesyoDRAFT_1182
symbol: EHQ88350.1
gene_biotype: protein_coding
description:
  Ni,Fe-hydrogenase III small subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; 4Fe-4S binding domain.


ensembl_gene_id: DesyoDRAFT_1183
symbol: EHQ88351.1
gene_biotype: protein_coding
description:
  Transcriptional activator of acetoin/glycerol metabolism; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: DesyoDRAFT_1185
symbol: EHQ88353.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis enzyme; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: DesyoDRAFT_1186
symbol: EHQ88354.1
gene_biotype: protein_coding
description:
  Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain.


ensembl_gene_id: DesyoDRAFT_1187
symbol: EHQ88355.1
gene_biotype: protein_coding
description:
  NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Cysteine-rich domain; Thi4 family.


ensembl_gene_id: DesyoDRAFT_1189
symbol: EHQ88357.1
gene_biotype: protein_coding
description:
  PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein.


ensembl_gene_id: DesyoDRAFT_1195
symbol: EHQ88363.1
gene_biotype: protein_coding
description:
  Alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase.


ensembl_gene_id: DesyoDRAFT_1196
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_1198
symbol: EHQ88366.1
gene_biotype: protein_coding
description:
  PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: DesyoDRAFT_1200
symbol: mqnC
gene_biotype: protein_coding
description:
  Menaquinone biosynthesis protein, SCO4550 family; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: DesyoDRAFT_1201
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine targeting protein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: DesyoDRAFT_1202
symbol: EHQ88370.1
gene_biotype: protein_coding
description:
  Sec-independent protein secretion pathway component; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase TatB.


ensembl_gene_id: DesyoDRAFT_1203
symbol: EHQ88371.1
gene_biotype: protein_coding
description:
  Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; TIGRFAM: heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: DesyoDRAFT_1208
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: DesyoDRAFT_1209
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: DesyoDRAFT_1210
symbol: EHQ88378.1
gene_biotype: protein_coding
description:
  uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.


ensembl_gene_id: DesyoDRAFT_1211
symbol: EHQ88379.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ1; radical SAM additional 4Fe4S-binding domain.


ensembl_gene_id: DesyoDRAFT_1213
symbol: EHQ88381.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ2; radical SAM additional 4Fe4S-binding domain.


ensembl_gene_id: DesyoDRAFT_1215
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.


ensembl_gene_id: DesyoDRAFT_1218
symbol: EHQ88386.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.


ensembl_gene_id: DesyoDRAFT_1223
symbol: acsA
gene_biotype: protein_coding
description:
  acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: DesyoDRAFT_1230
symbol: EHQ88398.1
gene_biotype: protein_coding
description:
  P-loop ATPase, MinD superfamily; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_1232
symbol: EHQ88400.1
gene_biotype: protein_coding
description:
  ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: DesyoDRAFT_1237
symbol: tatA
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: DesyoDRAFT_1246
symbol: pckA
gene_biotype: protein_coding
description:
  ATP-dependent phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: DesyoDRAFT_1258
symbol: EHQ88426.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein; FMN-binding domain.


ensembl_gene_id: DesyoDRAFT_1259
symbol: EHQ88427.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: DesyoDRAFT_1287
symbol: EHQ88452.1
gene_biotype: protein_coding
description:
  Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.


ensembl_gene_id: DesyoDRAFT_1291
symbol: EHQ88456.1
gene_biotype: protein_coding
description:
  Putative selenate reductase, YgfK subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: putative selenate reductase, YgfK subunit.


ensembl_gene_id: DesyoDRAFT_1294
symbol: EHQ88459.1
gene_biotype: protein_coding
description:
  PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein.


ensembl_gene_id: DesyoDRAFT_1296
symbol: EHQ88461.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: DesyoDRAFT_1299
symbol: EHQ88464.1
gene_biotype: protein_coding
description:
  Diaminopropionate ammonia-lyase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: diaminopropionate ammonia-lyase family; diaminopropionate ammonia-lyase.


ensembl_gene_id: DesyoDRAFT_1301
symbol: EHQ88466.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; M20/DapE family protein YgeY.


ensembl_gene_id: DesyoDRAFT_1302
symbol: EHQ88467.1
gene_biotype: protein_coding
description:
  PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; probable carbamoyltransferase YgeW; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: DesyoDRAFT_1304
symbol: EHQ88469.1
gene_biotype: protein_coding
description:
  D-hydantoinase; PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase; dihydroorotase, multifunctional complex type.


ensembl_gene_id: DesyoDRAFT_1305
symbol: EHQ88470.1
gene_biotype: protein_coding
description:
  Selenium-dependent molybdenum hydroxylase 1; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain; TIGRFAM: selenium-dependent molybdenum hydroxylase 1.


ensembl_gene_id: DesyoDRAFT_1312
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: DesyoDRAFT_1315
symbol: EHQ88478.1
gene_biotype: protein_coding
description:
  Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.


ensembl_gene_id: DesyoDRAFT_1318
symbol: EHQ88481.1
gene_biotype: protein_coding
description:
  Cell wall-binding protein; PFAM: Bacterial Ig-like domain (group 2); Putative cell wall binding repeat 2.


ensembl_gene_id: DesyoDRAFT_1321
symbol: EHQ88483.1
gene_biotype: protein_coding
description:
  Putative regulator of cell autolysis; PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Glycosyl hydrolases family 2, sugar binding domain.


ensembl_gene_id: DesyoDRAFT_1322
symbol: EHQ88484.1
gene_biotype: protein_coding
description:
  Response regulator containing CheY-like receiver and SARP domains; PFAM: Response regulator receiver domain.


ensembl_gene_id: DesyoDRAFT_1324
symbol: EHQ88486.1
gene_biotype: protein_coding
description:
  Putative repeat protein; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; Bacterial Ig-like domain (group 3); Putative cell wall binding repeat 2; Cna protein B-type domain; Peptidase S24-like; TIGRFAM: Listeria/Bacterioides repeat.


ensembl_gene_id: DesyoDRAFT_1331
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1-type ATP synthase, alpha subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: DesyoDRAFT_1346
symbol: EHQ88504.1
gene_biotype: protein_coding
description:
  PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: DesyoDRAFT_1354
symbol: EHQ88512.1
gene_biotype: protein_coding
description:
  Putative vancomycin resistance protein; PFAM: Putative cell wall binding repeat 2; Bacterial Ig-like domain (group 4); VanW like protein.


ensembl_gene_id: DesyoDRAFT_1366
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase/cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: DesyoDRAFT_1368
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: DesyoDRAFT_1371
symbol: EHQ88529.1
gene_biotype: protein_coding
description:
  CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain.


ensembl_gene_id: DesyoDRAFT_1376
symbol: EHQ88534.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524).


ensembl_gene_id: DesyoDRAFT_1378
symbol: EHQ88536.1
gene_biotype: protein_coding
description:
  Putative hydrolase (metallo-beta-lactamase superfamily); PFAM: Metallo-beta-lactamase superfamily; Intermediate filament tail domain.


ensembl_gene_id: DesyoDRAFT_1384
symbol: EHQ88542.1
gene_biotype: protein_coding
description:
  Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_1393
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: DesyoDRAFT_1394
symbol: EHQ88552.1
gene_biotype: protein_coding
description:
  PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.


ensembl_gene_id: DesyoDRAFT_1395
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: DesyoDRAFT_1406
symbol: EHQ88563.1
gene_biotype: protein_coding
description:
  Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_1415
symbol: dsdA
gene_biotype: protein_coding
description:
  D-serine ammonia-lyase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: D-serine ammonia-lyase; manually curated; Belongs to the serine/threonine dehydratase family. DsdA subfamily.


ensembl_gene_id: DesyoDRAFT_1420
symbol: EHQ88577.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Pyrimidine dimer DNA glycosylase; TIGRFAM: conserved hypothetical protein.


ensembl_gene_id: DesyoDRAFT_1421
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: DesyoDRAFT_1423
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: DesyoDRAFT_1424
symbol: EHQ88581.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: DesyoDRAFT_1428
symbol: hprK
gene_biotype: protein_coding
description:
  Serine kinase of the HPr protein, regulates carbohydrate metabolism; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence  [...]


ensembl_gene_id: DesyoDRAFT_1442
symbol: EHQ88597.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: DesyoDRAFT_1445
symbol: EHQ88599.1
gene_biotype: protein_coding
description:
  Putative unusual protein kinase; PFAM: Phosphotransferase enzyme family; ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase.


ensembl_gene_id: DesyoDRAFT_1448
symbol: EHQ88602.1
gene_biotype: protein_coding
description:
  (4Fe-4S) cluster-containing protein; PFAM: Domain of unknown function (DUF3390); Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein.


ensembl_gene_id: DesyoDRAFT_1452
symbol: EHQ88606.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.


ensembl_gene_id: DesyoDRAFT_1460
symbol: EHQ88613.1
gene_biotype: protein_coding
description:
  PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.


ensembl_gene_id: DesyoDRAFT_1462
symbol: hutH
gene_biotype: protein_coding
description:
  PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: phenylalanine ammonia-lyase; histidine ammonia-lyase.


ensembl_gene_id: DesyoDRAFT_1464
symbol: EHQ88617.1
gene_biotype: protein_coding
description:
  Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.


ensembl_gene_id: DesyoDRAFT_1471
symbol: EHQ88624.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; Tat (twin-arginine translocation) pathway signal sequence; Contains selenocysteine; manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_1472
symbol: EHQ88625.1
gene_biotype: protein_coding
description:
  Fe-S-cluster-containing hydrogenase subunit; PFAM: Formate dehydrogenase N, transmembrane; 4Fe-4S binding domain; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing.


ensembl_gene_id: DesyoDRAFT_1485
symbol: EHQ88636.1
gene_biotype: protein_coding
description:
  Transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.


ensembl_gene_id: DesyoDRAFT_1486
symbol: EHQ88637.1
gene_biotype: protein_coding
description:
  Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; manually curated; non-canonical start codon; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: DesyoDRAFT_1495
symbol: EHQ88643.1
gene_biotype: protein_coding
description:
  PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3.


ensembl_gene_id: DesyoDRAFT_1497
symbol: EHQ88645.1
gene_biotype: protein_coding
description:
  Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: ThiF family.


ensembl_gene_id: DesyoDRAFT_1498
symbol: EHQ88646.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: DesyoDRAFT_1503
symbol: EHQ88651.1
gene_biotype: protein_coding
description:
  ABC-type tungstate transport system, periplasmic component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_1513
symbol: EHQ88659.1
gene_biotype: protein_coding
description:
  Site-specific DNA methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam).


ensembl_gene_id: DesyoDRAFT_1514
symbol: EHQ88660.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: DesyoDRAFT_1524
symbol: EHQ88667.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein.


ensembl_gene_id: DesyoDRAFT_1529
symbol: EHQ88672.1
gene_biotype: protein_coding
description:
  Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_1539
symbol: EHQ88682.1
gene_biotype: protein_coding
description:
  Arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein.


ensembl_gene_id: DesyoDRAFT_1565
symbol: EHQ88702.1
gene_biotype: protein_coding
description:
  Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; overlaps another CDS with the same product name; Belongs to the 'phage' integrase family.


ensembl_gene_id: DesyoDRAFT_1566
symbol: EHQ88703.1
gene_biotype: protein_coding
description:
  Site-specific recombinase XerD; PFAM: Phage integrase family; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_1567
symbol: EHQ88704.1
gene_biotype: protein_coding
description:
  Site-specific recombinase XerD; PFAM: Phage integrase family; overlaps another CDS with the same product name; Belongs to the 'phage' integrase family.


ensembl_gene_id: DesyoDRAFT_1586
symbol: EHQ88721.1
gene_biotype: protein_coding
description:
  Putative kinase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: polynucleotide kinase-phosphatase.


ensembl_gene_id: DesyoDRAFT_1589
symbol: EHQ88723.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: DesyoDRAFT_1596
symbol: EHQ88729.1
gene_biotype: protein_coding
description:
  Na+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: DesyoDRAFT_1601
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: DesyoDRAFT_1602
symbol: EHQ88734.1
gene_biotype: protein_coding
description:
  PFAM: Sporulation and spore germination; N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD.


ensembl_gene_id: DesyoDRAFT_1611
symbol: EHQ88740.1
gene_biotype: protein_coding
description:
  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.


ensembl_gene_id: DesyoDRAFT_1627
symbol: EHQ88756.1
gene_biotype: protein_coding
description:
  Cellobiose phosphorylase; PFAM: Glycosyltransferase family 36; Uncharacterized protein conserved in bacteria (DUF2329); Putative carbohydrate binding domain; Glycosyltransferase 36 associated family.


ensembl_gene_id: DesyoDRAFT_1632
symbol: EHQ88761.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: DesyoDRAFT_1633
symbol: EHQ88762.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.


ensembl_gene_id: DesyoDRAFT_1636
symbol: EHQ88765.1
gene_biotype: protein_coding
description:
  Short-chain alcohol dehydrogenase like protein; Dehydrogenase of unknown specificity; PFAM: short chain dehydrogenase.


ensembl_gene_id: DesyoDRAFT_1647
symbol: EHQ88776.1
gene_biotype: protein_coding
description:
  Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.


ensembl_gene_id: DesyoDRAFT_1648
symbol: EHQ88777.1
gene_biotype: protein_coding
description:
  Putative NADH:ubiquinone oxidoreductase, subunit RnfC; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.


ensembl_gene_id: DesyoDRAFT_1652
symbol: eutC
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase, small subunit; PFAM: Ethanolamine ammonia-lyase light chain (EutC); Belongs to the EutC family.


ensembl_gene_id: DesyoDRAFT_1653
symbol: EHQ88782.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; PFAM: Ethanolamine utilisation protein EutA.


ensembl_gene_id: DesyoDRAFT_1660
symbol: EHQ88789.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: DesyoDRAFT_1662
symbol: EHQ88791.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family.


ensembl_gene_id: DesyoDRAFT_1663
symbol: EHQ88792.1
gene_biotype: protein_coding
description:
  ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.


ensembl_gene_id: DesyoDRAFT_1668
symbol: EHQ88797.1
gene_biotype: protein_coding
description:
  Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold.


ensembl_gene_id: DesyoDRAFT_1669
symbol: EHQ88798.1
gene_biotype: protein_coding
description:
  PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family.


ensembl_gene_id: DesyoDRAFT_1670
symbol: EHQ88799.1
gene_biotype: protein_coding
description:
  PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup.


ensembl_gene_id: DesyoDRAFT_1673
symbol: EHQ88802.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; Belongs to the UPF0178 family.


ensembl_gene_id: DesyoDRAFT_1689
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: DesyoDRAFT_1690
symbol: EHQ88819.1
gene_biotype: protein_coding
description:
  Acetyltransferase (isoleucine patch superfamily); PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: DesyoDRAFT_1691
symbol: EHQ88820.1
gene_biotype: protein_coding
description:
  PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid.


ensembl_gene_id: DesyoDRAFT_1693
symbol: EHQ88822.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: DesyoDRAFT_1700
symbol: EHQ88828.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; Thioredoxin; TIGRFAM: thioredoxin-disulfide reductase.


ensembl_gene_id: DesyoDRAFT_1702
symbol: EHQ88830.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: DesyoDRAFT_1705
symbol: EHQ88833.1
gene_biotype: protein_coding
description:
  Protein containing von Willebrand factor type A (vWA) domain; PFAM: VWA domain containing CoxE-like protein.


ensembl_gene_id: DesyoDRAFT_1707
symbol: EHQ88835.1
gene_biotype: protein_coding
description:
  PFAM: Desulfoferrodoxin, N-terminal domain; Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.


ensembl_gene_id: DesyoDRAFT_1708
symbol: EHQ88836.1
gene_biotype: protein_coding
description:
  Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase.


ensembl_gene_id: DesyoDRAFT_1710
symbol: EHQ88838.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: DesyoDRAFT_1712
symbol: sat
gene_biotype: protein_coding
description:
  PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase; Belongs to the sulfate adenylyltransferase family.


ensembl_gene_id: DesyoDRAFT_1713
symbol: EHQ88841.1
gene_biotype: protein_coding
description:
  PFAM: Adenosine-5'-phosphosulfate reductase beta subunit; TIGRFAM: adenosine phosphosulphate reductase, beta subunit.


ensembl_gene_id: DesyoDRAFT_1716
symbol: EHQ88844.1
gene_biotype: protein_coding
description:
  Sulfate permease-like transporter, MFS superfamily; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1.


ensembl_gene_id: DesyoDRAFT_1736
symbol: EHQ88864.1
gene_biotype: protein_coding
description:
  Putative stress response protein, TerZ- and CABP1; PFAM: Tellurite resistance protein TerB; Bacterial stress protein.


ensembl_gene_id: DesyoDRAFT_1740
symbol: EHQ88868.1
gene_biotype: protein_coding
description:
  Putative acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.


ensembl_gene_id: DesyoDRAFT_1741
symbol: EHQ88869.1
gene_biotype: protein_coding
description:
  Arabinose efflux permease family protein; PFAM: Sugar (and other) transporter; Major Facilitator Superfamily; TIGRFAM: benzoate transport.


ensembl_gene_id: DesyoDRAFT_1744
symbol: EHQ88872.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: DesyoDRAFT_1754
symbol: EHQ88882.1
gene_biotype: protein_coding
description:
  Acyl CoA:acetate/3-ketoacid CoA transferase; PFAM: Coenzyme A transferase; Belongs to the 3-oxoacid CoA-transferase family.


ensembl_gene_id: DesyoDRAFT_1760
symbol: EHQ88888.1
gene_biotype: protein_coding
description:
  ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: DesyoDRAFT_1762
symbol: EHQ88890.1
gene_biotype: protein_coding
description:
  PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase).


ensembl_gene_id: DesyoDRAFT_1767
symbol: EHQ88895.1
gene_biotype: protein_coding
description:
  Nitrogenase subunit NifH (ATPase); PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: DesyoDRAFT_1773
symbol: EHQ88901.1
gene_biotype: protein_coding
description:
  DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: DesyoDRAFT_1776
symbol: EHQ88904.1
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase, putative; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: DesyoDRAFT_1780
symbol: EHQ88908.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.


ensembl_gene_id: DesyoDRAFT_1783
symbol: EHQ88911.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase, nitrate/nitrite-specific; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: DesyoDRAFT_1787
symbol: EHQ88915.1
gene_biotype: protein_coding
description:
  Bacteriocin propeptide, TIGR03798 family; PFAM: Nitrogen fixation protein of unknown function; TIGRFAM: bacteriocin propeptide, TIGR03798 family.


ensembl_gene_id: DesyoDRAFT_1789
symbol: EHQ88917.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; TIGRFAM: nif11-class bacteriocin maturation radical SAM enzyme; radical SAM additional 4Fe4S-binding domain.


ensembl_gene_id: DesyoDRAFT_1792
symbol: EHQ88920.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein.


ensembl_gene_id: DesyoDRAFT_1793
symbol: EHQ88921.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: NHLM bacteriocin system ABC transporter, ATP-binding protein.


ensembl_gene_id: DesyoDRAFT_1803
symbol: EHQ88928.1
gene_biotype: protein_coding
description:
  Protein of unknown function (DUF664); Possible metal-dependent hydrolase; Belongs to the metal hydrolase YfiT family.


ensembl_gene_id: DesyoDRAFT_1804
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: DesyoDRAFT_1809
symbol: EHQ88934.1
gene_biotype: protein_coding
description:
  Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: DesyoDRAFT_1824
symbol: EHQ88949.1
gene_biotype: protein_coding
description:
  Acetyltransferase (isoleucine patch superfamily); PFAM: Bacterial transferase hexapeptide (three repeats).


ensembl_gene_id: DesyoDRAFT_1828
symbol: EHQ88952.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase-related, FMN binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: DesyoDRAFT_1830
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase, C subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: DesyoDRAFT_1831
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase, B subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: DesyoDRAFT_1832
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase, KdpA; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: DesyoDRAFT_1835
symbol: EHQ88959.1
gene_biotype: protein_coding
description:
  Osmosensitive K+ channel histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel His kinase sensor domain; Universal stress protein family.


ensembl_gene_id: DesyoDRAFT_1837
symbol: EHQ88961.1
gene_biotype: protein_coding
description:
  DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: DesyoDRAFT_1838
symbol: EHQ88962.1
gene_biotype: protein_coding
description:
  PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep); TIGRFAM: conserved hypothetical integral membrane protein TIGR02185.


ensembl_gene_id: DesyoDRAFT_1840
symbol: EHQ88964.1
gene_biotype: protein_coding
description:
  ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.


ensembl_gene_id: DesyoDRAFT_1846
symbol: EHQ88969.1
gene_biotype: protein_coding
description:
  ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.


ensembl_gene_id: DesyoDRAFT_1850
symbol: EHQ88973.1
gene_biotype: protein_coding
description:
  PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: DesyoDRAFT_1852
symbol: EHQ88975.1
gene_biotype: protein_coding
description:
  PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III.


ensembl_gene_id: DesyoDRAFT_1853
symbol: EHQ88976.1
gene_biotype: protein_coding
description:
  PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family; manually curated.


ensembl_gene_id: DesyoDRAFT_1856
symbol: EHQ88979.1
gene_biotype: protein_coding
description:
  Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Condensation domain; Nonribosomal peptide synthase; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain.


ensembl_gene_id: DesyoDRAFT_1859
symbol: EHQ88982.1
gene_biotype: protein_coding
description:
  PFAM: Phosphopantetheine attachment site; Male sterility protein; TIGRFAM: thioester reductase domain.


ensembl_gene_id: DesyoDRAFT_1890
symbol: EHQ89005.1
gene_biotype: protein_coding
description:
  Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.


ensembl_gene_id: DesyoDRAFT_1893
symbol: EHQ89007.1
gene_biotype: protein_coding
description:
  Transposase, IS605 OrfB family, central region; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.


ensembl_gene_id: DesyoDRAFT_1896
symbol: EHQ89009.1
gene_biotype: protein_coding
description:
  ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.


ensembl_gene_id: DesyoDRAFT_1897
symbol: EHQ89010.1
gene_biotype: protein_coding
description:
  ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_1905
symbol: EHQ89018.1
gene_biotype: protein_coding
description:
  PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: DesyoDRAFT_1929
symbol: EHQ89039.1
gene_biotype: protein_coding
description:
  PFAM: CBS domain; Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: DesyoDRAFT_1934
symbol: nudC
gene_biotype: protein_coding
description:
  Zn-finger containing NTP pyrophosphohydrolase; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: DesyoDRAFT_1943
symbol: EHQ89051.1
gene_biotype: protein_coding
description:
  Secondary thiamine-phosphate synthase enzyme; PFAM: Uncharacterised protein family UPF0047; NUDIX domain; TIGRFAM: secondary thiamine-phosphate synthase enzyme; Belongs to the Nudix hydrolase family.


ensembl_gene_id: DesyoDRAFT_1971
symbol: EHQ89076.1
gene_biotype: protein_coding
description:
  Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Prolyl oligopeptidase family.


ensembl_gene_id: DesyoDRAFT_1974
symbol: EHQ89078.1
gene_biotype: protein_coding
description:
  nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family.


ensembl_gene_id: DesyoDRAFT_1986
symbol: EHQ89090.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: CBS domain; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_1994
symbol: EHQ89097.1
gene_biotype: protein_coding
description:
  Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: DesyoDRAFT_2008
symbol: EHQ89110.1
gene_biotype: protein_coding
description:
  Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family.


ensembl_gene_id: DesyoDRAFT_2012
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: DesyoDRAFT_2019
symbol: EHQ89121.1
gene_biotype: protein_coding
description:
  Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_2020
symbol: EHQ89122.1
gene_biotype: protein_coding
description:
  ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_2024
symbol: EHQ89126.1
gene_biotype: protein_coding
description:
  ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.


ensembl_gene_id: DesyoDRAFT_2048
symbol: EHQ89146.1
gene_biotype: protein_coding
description:
  PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: DesyoDRAFT_2049
symbol: EHQ89147.1
gene_biotype: protein_coding
description:
  Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: DesyoDRAFT_2058
symbol: EHQ89154.1
gene_biotype: protein_coding
description:
  Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain; manually curated.


ensembl_gene_id: DesyoDRAFT_2066
symbol: EHQ89161.1
gene_biotype: protein_coding
description:
  Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).


ensembl_gene_id: DesyoDRAFT_2099
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: DesyoDRAFT_2107
symbol: EHQ89199.1
gene_biotype: protein_coding
description:
  Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: AraC-like ligand binding domain.


ensembl_gene_id: DesyoDRAFT_2112
symbol: EHQ89204.1
gene_biotype: protein_coding
description:
  Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit.


ensembl_gene_id: DesyoDRAFT_2113
symbol: EHQ89205.1
gene_biotype: protein_coding
description:
  PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit.


ensembl_gene_id: DesyoDRAFT_2122
symbol: EHQ89209.1
gene_biotype: protein_coding
description:
  Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydD subunit.


ensembl_gene_id: DesyoDRAFT_2123
symbol: EHQ89210.1
gene_biotype: protein_coding
description:
  Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydC subunit.


ensembl_gene_id: DesyoDRAFT_2125
symbol: EHQ89212.1
gene_biotype: protein_coding
description:
  PFAM: Cache domain; HD domain; HAMP domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: DesyoDRAFT_2130
symbol: EHQ89217.1
gene_biotype: protein_coding
description:
  N-acyl-D-aspartate/D-glutamate deacylase; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family.


ensembl_gene_id: DesyoDRAFT_2134
symbol: EHQ89221.1
gene_biotype: protein_coding
description:
  PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase.


ensembl_gene_id: DesyoDRAFT_2135
symbol: EHQ89222.1
gene_biotype: protein_coding
description:
  PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: DesyoDRAFT_2136
symbol: EHQ89223.1
gene_biotype: protein_coding
description:
  PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.


ensembl_gene_id: DesyoDRAFT_2137
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: DesyoDRAFT_2148
symbol: EHQ89233.1
gene_biotype: protein_coding
description:
  Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_2151
symbol: EHQ89236.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: DesyoDRAFT_2156
symbol: EHQ89241.1
gene_biotype: protein_coding
description:
  PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); Belongs to the FPG family.


ensembl_gene_id: DesyoDRAFT_2162
symbol: EHQ89247.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein.


ensembl_gene_id: DesyoDRAFT_2163
symbol: EHQ89248.1
gene_biotype: protein_coding
description:
  PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC.


ensembl_gene_id: DesyoDRAFT_2164
symbol: EHQ89249.1
gene_biotype: protein_coding
description:
  PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuD.


ensembl_gene_id: DesyoDRAFT_2176
symbol: EHQ89261.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, permease component; PFAM: High-affinity nickel-transport protein.


ensembl_gene_id: DesyoDRAFT_2178
symbol: EHQ89263.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: DesyoDRAFT_2182
symbol: EHQ89267.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.


ensembl_gene_id: DesyoDRAFT_2187
symbol: EHQ89272.1
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase.


ensembl_gene_id: DesyoDRAFT_2188
symbol: EHQ89273.1
gene_biotype: protein_coding
description:
  PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: DesyoDRAFT_2197
symbol: EHQ89282.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_2198
symbol: EHQ89283.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_2210
symbol: EHQ89295.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, clade II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II.


ensembl_gene_id: DesyoDRAFT_2212
symbol: dinB
gene_biotype: protein_coding
description:
  nucleotidyltransferase/DNA polymerase involved in DNA repair; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: DesyoDRAFT_2215
symbol: EHQ89300.1
gene_biotype: protein_coding
description:
  PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: DesyoDRAFT_2216
symbol: EHQ89301.1
gene_biotype: protein_coding
description:
  PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.


ensembl_gene_id: DesyoDRAFT_2226
symbol: EHQ89311.1
gene_biotype: protein_coding
description:
  Bifunctional PLP-dependent enzyme; Has beta-cystathionase and maltose regulon repressor activities; PFAM: Aminotransferase class I and II.


ensembl_gene_id: DesyoDRAFT_2235
symbol: EHQ89320.1
gene_biotype: protein_coding
description:
  Bacillithiol system protein YtxJ; PFAM: Protein of unknown function (DUF2847); TIGRFAM: bacillithiol system protein YtxJ.


ensembl_gene_id: DesyoDRAFT_2238
symbol: glgB
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: DesyoDRAFT_2239
symbol: EHQ89324.1
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: DesyoDRAFT_2240
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: DesyoDRAFT_2243
symbol: EHQ89328.1
gene_biotype: protein_coding
description:
  PFAM: 4-alpha-glucanotransferase; Alpha amylase, catalytic domain; TIGRFAM: 4-alpha-glucanotransferase; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: DesyoDRAFT_2253
symbol: EHQ89338.1
gene_biotype: protein_coding
description:
  PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain.


ensembl_gene_id: DesyoDRAFT_2257
symbol: EHQ89342.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: DesyoDRAFT_2264
symbol: EHQ89348.1
gene_biotype: protein_coding
description:
  Heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.


ensembl_gene_id: DesyoDRAFT_2278
symbol: EHQ89361.1
gene_biotype: protein_coding
description:
  DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.


ensembl_gene_id: DesyoDRAFT_2284
symbol: EHQ89367.1
gene_biotype: protein_coding
description:
  Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: DesyoDRAFT_2285
symbol: EHQ89368.1
gene_biotype: protein_coding
description:
  Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase.


ensembl_gene_id: DesyoDRAFT_2292
symbol: EHQ89375.1
gene_biotype: protein_coding
description:
  Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.


ensembl_gene_id: DesyoDRAFT_2293
symbol: EHQ89376.1
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase.


ensembl_gene_id: DesyoDRAFT_2299
symbol: EHQ89382.1
gene_biotype: protein_coding
description:
  Serine kinase of the HPr protein, regulates carbohydrate metabolism; PFAM: HPr Serine kinase C-terminal domain.


ensembl_gene_id: DesyoDRAFT_2319
symbol: EHQ89400.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DesyoDRAFT_2325
symbol: EHQ89406.1
gene_biotype: protein_coding
description:
  Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; PFAM: Sigma-54 interaction domain; PAS fold.


ensembl_gene_id: DesyoDRAFT_2339
symbol: EHQ89419.1
gene_biotype: protein_coding
description:
  Transcriptional activator of acetoin/glycerol metabolism; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold.


ensembl_gene_id: DesyoDRAFT_2346
symbol: EHQ89426.1
gene_biotype: protein_coding
description:
  PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: butyryl-CoA:acetate CoA-transferase.


ensembl_gene_id: DesyoDRAFT_2349
symbol: EHQ89429.1
gene_biotype: protein_coding
description:
  Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.


ensembl_gene_id: DesyoDRAFT_2352
symbol: EHQ89432.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: DesyoDRAFT_2358
symbol: EHQ89438.1
gene_biotype: protein_coding
description:
  PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase.


ensembl_gene_id: DesyoDRAFT_2367
symbol: EHQ89447.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; TIGRFAM: ectoine utilization protein EutD.


ensembl_gene_id: DesyoDRAFT_2368
symbol: EHQ89448.1
gene_biotype: protein_coding
description:
  Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase.


ensembl_gene_id: DesyoDRAFT_2371
symbol: EHQ89451.1
gene_biotype: protein_coding
description:
  PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain.


ensembl_gene_id: DesyoDRAFT_2374
symbol: EHQ89454.1
gene_biotype: protein_coding
description:
  HAD hydrolase, subfamily IA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254.


ensembl_gene_id: DesyoDRAFT_2384
symbol: EHQ89464.1
gene_biotype: protein_coding
description:
  Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: DesyoDRAFT_2391
symbol: EHQ89469.1
gene_biotype: protein_coding
description:
  TIGR02677 family protein; PFAM: Protein of unknown function (DUF2397); TIGRFAM: TIGR02677 family protein.


ensembl_gene_id: DesyoDRAFT_2392
symbol: EHQ89470.1
gene_biotype: protein_coding
description:
  TIGR02678 family protein; PFAM: Protein of unknown function (DUF2398); TIGRFAM: TIGR02678 family protein.


ensembl_gene_id: DesyoDRAFT_2394
symbol: EHQ89472.1
gene_biotype: protein_coding
description:
  TIGR02679 family protein; PFAM: Protein of unknown function N-terminus (DUF3323); Protein of unknown function C-terminus (DUF2399); TIGRFAM: TIGR02679 family protein.


ensembl_gene_id: DesyoDRAFT_2399
symbol: EHQ89475.1
gene_biotype: protein_coding
description:
  MutS domain V; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: DesyoDRAFT_2433
symbol: EHQ89508.1
gene_biotype: protein_coding
description:
  PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.


ensembl_gene_id: DesyoDRAFT_2445
symbol: EHQ89520.1
gene_biotype: protein_coding
description:
  PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade.


ensembl_gene_id: DesyoDRAFT_2450
symbol: EHQ89525.1
gene_biotype: protein_coding
description:
  HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: HIT domain; manually curated; non-canonical start codon.


ensembl_gene_id: DesyoDRAFT_2462
symbol: EHQ89537.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Eukaryotic and archaeal DNA primase small subunit; Type III restriction enzyme, res subunit.


ensembl_gene_id: DesyoDRAFT_2476
symbol: EHQ89549.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.


ensembl_gene_id: DesyoDRAFT_2477
symbol: EHQ89550.1
gene_biotype: protein_coding
description:
  Zn-finger domain-containing protein (topoisomerase type I-like); PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger.


ensembl_gene_id: DesyoDRAFT_2479
symbol: EHQ89552.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427).


ensembl_gene_id: DesyoDRAFT_2485
symbol: dbpA
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: DesyoDRAFT_2487
symbol: EHQ89560.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02954 family; RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: DesyoDRAFT_2495
symbol: EHQ89568.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; manually curated.


ensembl_gene_id: DesyoDRAFT_2496
symbol: EHQ89569.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; UvrD/REP helicase; Viral (Superfamily 1) RNA helicase; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family.


ensembl_gene_id: DesyoDRAFT_2502
symbol: EHQ89575.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: DesyoDRAFT_2514
symbol: EHQ89587.1
gene_biotype: protein_coding
description:
  Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid stabilisation system protein.


ensembl_gene_id: DesyoDRAFT_2517
symbol: EHQ89588.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM protein, BA_1875 family.


ensembl_gene_id: DesyoDRAFT_2539
symbol: EHQ89605.1
gene_biotype: protein_coding
description:
  PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: DesyoDRAFT_2545
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: DesyoDRAFT_2553
symbol: EHQ89619.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DesyoDRAFT_2559
symbol: EHQ89625.1
gene_biotype: protein_coding
description:
  Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: DesyoDRAFT_2566
symbol: EHQ89632.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_2568
symbol: EHQ89634.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_2570
symbol: EHQ89636.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein.


ensembl_gene_id: DesyoDRAFT_2573
symbol: EHQ89639.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase family M20/M25/M40.


ensembl_gene_id: DesyoDRAFT_2600
symbol: EHQ89666.1
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only; Tat (twin-arginine translocation) pathway signal sequence.


ensembl_gene_id: DesyoDRAFT_2605
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: DesyoDRAFT_2606
symbol: EHQ89672.1
gene_biotype: protein_coding
description:
  Putative regulator of cell autolysis; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: DesyoDRAFT_2608
symbol: EHQ89674.1
gene_biotype: protein_coding
description:
  PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_2610
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator (could also regulate swarming and quorum sensing); A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: DesyoDRAFT_2612
symbol: EHQ89678.1
gene_biotype: protein_coding
description:
  Flagellin/flagellar hook associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: DesyoDRAFT_2614
symbol: EHQ89680.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein.


ensembl_gene_id: DesyoDRAFT_2615
symbol: EHQ89681.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: DesyoDRAFT_2620
symbol: EHQ89686.1
gene_biotype: protein_coding
description:
  Putative molybdenum utilization protein ModD; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; putative molybdenum utilization protein ModD; Belongs to the NadC/ModD family.


ensembl_gene_id: DesyoDRAFT_2623
symbol: EHQ89689.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.


ensembl_gene_id: DesyoDRAFT_2624
symbol: EHQ89690.1
gene_biotype: protein_coding
description:
  ABC-type spermidine/putrescine transport system, permease component I; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_2625
symbol: EHQ89691.1
gene_biotype: protein_coding
description:
  ABC-type spermidine/putrescine transport system, permease component II; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_2626
symbol: EHQ89692.1
gene_biotype: protein_coding
description:
  ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DesyoDRAFT_2638
symbol: EHQ89704.1
gene_biotype: protein_coding
description:
  PFAM: Met-10+ like-protein; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.


ensembl_gene_id: DesyoDRAFT_2639
symbol: EHQ89705.1
gene_biotype: protein_coding
description:
  Precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: DesyoDRAFT_2640
symbol: EHQ89706.1
gene_biotype: protein_coding
description:
  Precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: DesyoDRAFT_2641
symbol: EHQ89707.1
gene_biotype: protein_coding
description:
  PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal.


ensembl_gene_id: DesyoDRAFT_2642
symbol: EHQ89708.1
gene_biotype: protein_coding
description:
  precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase.


ensembl_gene_id: DesyoDRAFT_2646
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: DesyoDRAFT_2647
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: DesyoDRAFT_2648
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: DesyoDRAFT_2651
symbol: EHQ89717.1
gene_biotype: protein_coding
description:
  PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase.


ensembl_gene_id: DesyoDRAFT_2655
symbol: EHQ89721.1
gene_biotype: protein_coding
description:
  Putative GTPase, G3E family; PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain.


ensembl_gene_id: DesyoDRAFT_2658
symbol: EHQ89724.1
gene_biotype: protein_coding
description:
  DNA-binding domain-containing protein, AraC-type; PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: DesyoDRAFT_2672
symbol: EHQ89738.1
gene_biotype: protein_coding
description:
  Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: DesyoDRAFT_2675
symbol: EHQ89741.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179).


ensembl_gene_id: DesyoDRAFT_2677
symbol: addB
gene_biotype: protein_coding
description:
  Helicase-exonuclease AddAB, AddB subunit; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_2710
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: DesyoDRAFT_2712
symbol: EHQ89767.1
gene_biotype: protein_coding
description:
  Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.


ensembl_gene_id: DesyoDRAFT_2716
symbol: EHQ89771.1
gene_biotype: protein_coding
description:
  Sulfite reductase, beta subunit (hemoprotein); PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.


ensembl_gene_id: DesyoDRAFT_2717
symbol: EHQ89772.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit.


ensembl_gene_id: DesyoDRAFT_2719
symbol: EHQ89774.1
gene_biotype: protein_coding
description:
  Small GTP-binding protein domain protein; PFAM: Protein of unknown function (DUF901); Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain.


ensembl_gene_id: DesyoDRAFT_2727
symbol: EHQ89782.1
gene_biotype: protein_coding
description:
  Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: DesyoDRAFT_2729
symbol: EHQ89784.1
gene_biotype: protein_coding
description:
  DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: DesyoDRAFT_2736
symbol: EHQ89790.1
gene_biotype: protein_coding
description:
  Cell wall-binding protein; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Putative cell wall binding repeat 2.


ensembl_gene_id: DesyoDRAFT_2742
symbol: EHQ89796.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; PFAM: Metal binding domain of Ada; Bacterial regulatory helix-turn-helix proteins, AraC family.


ensembl_gene_id: DesyoDRAFT_2744
symbol: EHQ89798.1
gene_biotype: protein_coding
description:
  ABC-type molybdate transport system, periplasmic component; TIGRFAM: tungstate ABC transporter binding protein WtpA.


ensembl_gene_id: DesyoDRAFT_2745
symbol: EHQ89799.1
gene_biotype: protein_coding
description:
  PFAM: Transcriptional regulator PadR-like family; TIGRFAM: poly-beta-hydroxybutyrate-responsive repressor.


ensembl_gene_id: DesyoDRAFT_2761
symbol: crcB
gene_biotype: protein_coding
description:
  crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: DesyoDRAFT_2778
symbol: EHQ89830.1
gene_biotype: protein_coding
description:
  Arabinose efflux permease family protein; PFAM: PUCC protein; Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein.


ensembl_gene_id: DesyoDRAFT_2822
symbol: EHQ89871.1
gene_biotype: protein_coding
description:
  Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family.


ensembl_gene_id: DesyoDRAFT_2825
symbol: EHQ89874.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_2851
symbol: EHQ89899.1
gene_biotype: protein_coding
description:
  ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL.


ensembl_gene_id: DesyoDRAFT_2853
symbol: EHQ89901.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: DesyoDRAFT_2868
symbol: EHQ89916.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: DesyoDRAFT_2877
symbol: lexA
gene_biotype: protein_coding
description:
  SOS regulatory protein LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: DesyoDRAFT_2879
symbol: EHQ89927.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.


ensembl_gene_id: DesyoDRAFT_2880
symbol: EHQ89928.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase family protein involved in aluminum resistance; PFAM: Aluminium resistance protein.


ensembl_gene_id: DesyoDRAFT_2882
symbol: EHQ89930.1
gene_biotype: protein_coding
description:
  PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K.


ensembl_gene_id: DesyoDRAFT_2883
symbol: EHQ89931.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA/BipA; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain.


ensembl_gene_id: DesyoDRAFT_2884
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: DesyoDRAFT_2885
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA isopentenyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: DesyoDRAFT_2886
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: DesyoDRAFT_2888
symbol: EHQ89936.1
gene_biotype: protein_coding
description:
  N-methylhydantoinase A/acetone carboxylase, beta subunit; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region.


ensembl_gene_id: DesyoDRAFT_2889
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: DesyoDRAFT_2891
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: DesyoDRAFT_2902
symbol: EHQ89950.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: DesyoDRAFT_2906
symbol: EHQ89954.1
gene_biotype: protein_coding
description:
  Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain.


ensembl_gene_id: DesyoDRAFT_2908
symbol: EHQ89956.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: DesyoDRAFT_2909
symbol: pstB-2
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: DesyoDRAFT_2910
symbol: EHQ89958.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA.


ensembl_gene_id: DesyoDRAFT_2919
symbol: EHQ89966.1
gene_biotype: protein_coding
description:
  PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE.


ensembl_gene_id: DesyoDRAFT_2921
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: DesyoDRAFT_2922
symbol: EHQ89969.1
gene_biotype: protein_coding
description:
  ABC-type phosphate/phosphonate transport system, periplasmic component; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein.


ensembl_gene_id: DesyoDRAFT_2923
symbol: EHQ89970.1
gene_biotype: protein_coding
description:
  ABC-type phosphonate transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL.


ensembl_gene_id: DesyoDRAFT_2924
symbol: EHQ89971.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family.


ensembl_gene_id: DesyoDRAFT_2925
symbol: EHQ89972.1
gene_biotype: protein_coding
description:
  ABC-type phosphonate transport system, ATPase component; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK.


ensembl_gene_id: DesyoDRAFT_2928
symbol: EHQ89975.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial phosphonate metabolism protein (PhnH); TIGRFAM: phosphonate C-P lyase system protein PhnH.


ensembl_gene_id: DesyoDRAFT_2933
symbol: EHQ89980.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase.


ensembl_gene_id: DesyoDRAFT_2943
symbol: EHQ89990.1
gene_biotype: protein_coding
description:
  Chemotaxis protein histidine kinase-like protein; PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.


ensembl_gene_id: DesyoDRAFT_2947
symbol: EHQ89993.1
gene_biotype: protein_coding
description:
  Dipeptidase, putative; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: dipeptidase, putative.


ensembl_gene_id: DesyoDRAFT_2948
symbol: EHQ89994.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain.


ensembl_gene_id: DesyoDRAFT_2956
symbol: EHQ90002.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein, alpha subunit; PFAM: 4Fe-4S binding domain; Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.


ensembl_gene_id: DesyoDRAFT_2968
symbol: EHQ90014.1
gene_biotype: protein_coding
description:
  DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.


ensembl_gene_id: DesyoDRAFT_2970
symbol: EHQ90016.1
gene_biotype: protein_coding
description:
  Putative exonuclease of the beta-lactamase fold involved in RNA processing; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.


ensembl_gene_id: DesyoDRAFT_2972
symbol: EHQ90018.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: DesyoDRAFT_2975
symbol: EHQ90021.1
gene_biotype: protein_coding
description:
  PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.


ensembl_gene_id: DesyoDRAFT_2979
symbol: EHQ90025.1
gene_biotype: protein_coding
description:
  PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.


ensembl_gene_id: DesyoDRAFT_2985
symbol: EHQ90030.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: DesyoDRAFT_2987
symbol: ribBA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: DesyoDRAFT_2988
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: DesyoDRAFT_2989
symbol: EHQ90034.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor.


ensembl_gene_id: DesyoDRAFT_2993
symbol: EHQ90038.1
gene_biotype: protein_coding
description:
  UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; Belongs to the UbiD family.


ensembl_gene_id: DesyoDRAFT_2995
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: DesyoDRAFT_2996
symbol: EHQ90041.1
gene_biotype: protein_coding
description:
  DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: DnaJ domain; DnaJ C terminal region.


ensembl_gene_id: DesyoDRAFT_2997
symbol: EHQ90042.1
gene_biotype: protein_coding
description:
  Protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family.


ensembl_gene_id: DesyoDRAFT_2998
symbol: EHQ90043.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.


ensembl_gene_id: DesyoDRAFT_3010
symbol: EHQ90055.1
gene_biotype: protein_coding
description:
  Sulfite reductase, dissimilatory-type beta subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit.


ensembl_gene_id: DesyoDRAFT_3011
symbol: EHQ90056.1
gene_biotype: protein_coding
description:
  Sulfite reductase, dissimilatory-type alpha subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.


ensembl_gene_id: DesyoDRAFT_3018
symbol: EHQ90063.1
gene_biotype: protein_coding
description:
  PFAM: Putative RNA methylase family UPF0020; THUMP domain; Belongs to the methyltransferase superfamily.


ensembl_gene_id: DesyoDRAFT_3025
symbol: EHQ90070.1
gene_biotype: protein_coding
description:
  Putative double-stranded RNA/RNA-DNA hybrid binding protein; PFAM: RNase H; Caulimovirus viroplasmin.


ensembl_gene_id: DesyoDRAFT_3030
symbol: EHQ90075.1
gene_biotype: protein_coding
description:
  DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: DesyoDRAFT_3036
symbol: EHQ90080.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative.


ensembl_gene_id: DesyoDRAFT_3038
symbol: EHQ90082.1
gene_biotype: protein_coding
description:
  PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain.


ensembl_gene_id: DesyoDRAFT_3039
symbol: EHQ90083.1
gene_biotype: protein_coding
description:
  Isoaspartyl dipeptidase IadA; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: DesyoDRAFT_3040
symbol: EHQ90084.1
gene_biotype: protein_coding
description:
  Na+-driven multidrug efflux pump; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B.


ensembl_gene_id: DesyoDRAFT_3043
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: DesyoDRAFT_3046
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: DesyoDRAFT_3047
symbol: EHQ90091.1
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein.


ensembl_gene_id: DesyoDRAFT_3054
symbol: EHQ90098.1
gene_biotype: protein_coding
description:
  Fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase family; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: DesyoDRAFT_3058
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: DesyoDRAFT_3084
symbol: EHQ90122.1
gene_biotype: protein_coding
description:
  Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II.


ensembl_gene_id: DesyoDRAFT_3085
symbol: EHQ90123.1
gene_biotype: protein_coding
description:
  Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II.


ensembl_gene_id: DesyoDRAFT_3100
symbol: EHQ90136.1
gene_biotype: protein_coding
description:
  PFAM: HD domain; GGDEF domain; Predicted histidine kinase sensor domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: DesyoDRAFT_3108
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: DesyoDRAFT_3115
symbol: EHQ90151.1
gene_biotype: protein_coding
description:
  Sporulation protein YhbH; PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH; Belongs to the UPF0229 family.


ensembl_gene_id: DesyoDRAFT_3121
symbol: EHQ90157.1
gene_biotype: protein_coding
description:
  Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB.


ensembl_gene_id: DesyoDRAFT_3132
symbol: EHQ90166.1
gene_biotype: protein_coding
description:
  PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.


ensembl_gene_id: DesyoDRAFT_3175
symbol: EHQ90208.1
gene_biotype: protein_coding
description:
  Hydrid cluster protein-associated redox disulfide domain protein; PFAM: Domain of unknown function (DUF1858); Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: hydrid cluster protein-associated redox disulfide domain.


ensembl_gene_id: DesyoDRAFT_3179
symbol: EHQ90211.1
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: DesyoDRAFT_3180
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase precursor-related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: DesyoDRAFT_3183
symbol: EHQ90215.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; PFAM: Aminotransferase class IV.


ensembl_gene_id: DesyoDRAFT_3187
symbol: EHQ90219.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein.


ensembl_gene_id: DesyoDRAFT_3190
symbol: EHQ90222.1
gene_biotype: protein_coding
description:
  Phosphoesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family.


ensembl_gene_id: DesyoDRAFT_3191
symbol: mqnE
gene_biotype: protein_coding
description:
  Putative menaquinone biosynthesis protein, SCO4494 family; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: DesyoDRAFT_3195
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: DesyoDRAFT_3199
symbol: EHQ90231.1
gene_biotype: protein_coding
description:
  PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: HesB-like selenoprotein; Iron-sulfur cluster assembly accessory protein; Contains selenocysteine; manually curated; Belongs to the HesB/IscA family.


ensembl_gene_id: DesyoDRAFT_3209
symbol: mqnA
gene_biotype: protein_coding
description:
  Putative periplasmic solute-binding protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: DesyoDRAFT_3210
symbol: EHQ90242.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family.


ensembl_gene_id: DesyoDRAFT_3211
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: DesyoDRAFT_3219
symbol: EHQ90251.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family.


ensembl_gene_id: DesyoDRAFT_3222
symbol: menG
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: DesyoDRAFT_3234
symbol: EHQ90266.1
gene_biotype: protein_coding
description:
  Superfamily II RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DSHCT (NUC185) domain.


ensembl_gene_id: DesyoDRAFT_3238
symbol: EHQ90270.1
gene_biotype: protein_coding
description:
  Hypothetical protein containing a ferredoxin-like domain; PFAM: Cysteine-rich domain; Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein.


ensembl_gene_id: DesyoDRAFT_3247
symbol: EHQ90278.1
gene_biotype: protein_coding
description:
  Acetyltransferase, N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family; Belongs to the acetyltransferase family.


ensembl_gene_id: DesyoDRAFT_3248
symbol: EHQ90279.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase, nitrogen specific; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_3252
symbol: EHQ90283.1
gene_biotype: protein_coding
description:
  PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: DesyoDRAFT_3254
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: DesyoDRAFT_3259
symbol: EHQ90290.1
gene_biotype: protein_coding
description:
  Zn-dependent dipeptidase, microsomal dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19).


ensembl_gene_id: DesyoDRAFT_3265
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: DesyoDRAFT_3268
symbol: EHQ90298.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.


ensembl_gene_id: DesyoDRAFT_3269
symbol: cinA
gene_biotype: protein_coding
description:
  PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain.


ensembl_gene_id: DesyoDRAFT_3270
symbol: EHQ90300.1
gene_biotype: protein_coding
description:
  ATP-dependent Zn protease; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family.


ensembl_gene_id: DesyoDRAFT_3272
symbol: EHQ90302.1
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: DesyoDRAFT_3273
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: DesyoDRAFT_3278
symbol: EHQ90308.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein; Belongs to the PstS family.


ensembl_gene_id: DesyoDRAFT_3280
symbol: EHQ90310.1
gene_biotype: protein_coding
description:
  Uncharacterized radical SAM protein YgiQ; PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ.


ensembl_gene_id: DesyoDRAFT_3291
symbol: EHQ90321.1
gene_biotype: protein_coding
description:
  PFAM: HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: DesyoDRAFT_3296
symbol: EHQ90326.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase.


ensembl_gene_id: DesyoDRAFT_3301
symbol: EHQ90331.1
gene_biotype: protein_coding
description:
  CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein); PFAM: Putative Fe-S cluster.


ensembl_gene_id: DesyoDRAFT_3306
symbol: EHQ90336.1
gene_biotype: protein_coding
description:
  Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family; Putative peptidoglycan binding domain.


ensembl_gene_id: DesyoDRAFT_3314
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: DesyoDRAFT_3315
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: DesyoDRAFT_3316
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: DesyoDRAFT_3317
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: DesyoDRAFT_3318
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase, bacterial type; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_3319
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: DesyoDRAFT_3320
symbol: EHQ90350.1
gene_biotype: protein_coding
description:
  PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit.


ensembl_gene_id: DesyoDRAFT_3321
symbol: EHQ90351.1
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type.


ensembl_gene_id: DesyoDRAFT_3322
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase, group I; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: DesyoDRAFT_3325
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: DesyoDRAFT_3344
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: DesyoDRAFT_3345
symbol: EHQ90373.1
gene_biotype: protein_coding
description:
  Putative sporulation protein YtaF; PFAM: Domain of unknown function DUF; TIGRFAM: putative sporulation protein YtaF.


ensembl_gene_id: DesyoDRAFT_3350
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase Fpg; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: DesyoDRAFT_3352
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: DesyoDRAFT_3356
symbol: EHQ90382.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF1858); TIGRFAM: hydrid cluster protein-associated redox disulfide domain.


ensembl_gene_id: DesyoDRAFT_3359
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: DesyoDRAFT_3360
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: DesyoDRAFT_3362
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: DesyoDRAFT_3363
symbol: EHQ90388.1
gene_biotype: protein_coding
description:
  PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); manually curated; non-canonical start codon.


ensembl_gene_id: DesyoDRAFT_3364
symbol: EHQ90389.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator containing CBS domains; PFAM: HTH domain; DRTGG domain; CBS domain.


ensembl_gene_id: DesyoDRAFT_3367
symbol: EHQ90392.1
gene_biotype: protein_coding
description:
  Putative Zn-dependent hydrolase of beta-lactamase fold; PFAM: Metallo-beta-lactamase superfamily; Belongs to the UPF0173 family.


ensembl_gene_id: DesyoDRAFT_3369
symbol: EHQ90394.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4.


ensembl_gene_id: DesyoDRAFT_3370
symbol: EHQ90395.1
gene_biotype: protein_coding
description:
  Putative rRNA methylase SpoU family; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: DesyoDRAFT_3372
symbol: EHQ90397.1
gene_biotype: protein_coding
description:
  Aconitate hydratase, putative, Aquifex type; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type.


ensembl_gene_id: DesyoDRAFT_3376
symbol: EHQ90401.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_3378
symbol: EHQ90403.1
gene_biotype: protein_coding
description:
  PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; methylmalonyl-CoA mutase C-terminal domain.


ensembl_gene_id: DesyoDRAFT_3391
symbol: EHQ90415.1
gene_biotype: protein_coding
description:
  PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.


ensembl_gene_id: DesyoDRAFT_3403
symbol: EHQ90425.1
gene_biotype: protein_coding
description:
  Uncharacterized Fe-S protein; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative.


ensembl_gene_id: DesyoDRAFT_3405
symbol: EHQ90427.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: DesyoDRAFT_3409
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: DesyoDRAFT_3411
symbol: EHQ90433.1
gene_biotype: protein_coding
description:
  Plasma-membrane calcium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.


ensembl_gene_id: DesyoDRAFT_3413
symbol: EHQ90435.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD.


ensembl_gene_id: DesyoDRAFT_3418
symbol: EHQ90440.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Iron-binding zinc finger CDGSH type; Protein of unknown function (DUF1271).


ensembl_gene_id: DesyoDRAFT_3421
symbol: EHQ90443.1
gene_biotype: protein_coding
description:
  ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: CcmB protein.


ensembl_gene_id: DesyoDRAFT_3455
symbol: EHQ90467.1
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2225); Cyclic nucleotide-binding domain.


ensembl_gene_id: DesyoDRAFT_3460
symbol: EHQ90471.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: DesyoDRAFT_3461
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: DesyoDRAFT_3470
symbol: EHQ90481.1
gene_biotype: protein_coding
description:
  Penicillin V acylase-like amidase; PFAM: Linear amide C-N hydrolases, choloylglycine hydrolase family.


ensembl_gene_id: DesyoDRAFT_3471
symbol: EHQ90482.1
gene_biotype: protein_coding
description:
  Biotin synthase-like enzyme; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain.


ensembl_gene_id: DesyoDRAFT_3479
symbol: EHQ90490.1
gene_biotype: protein_coding
description:
  PFAM: GTPase of unknown function; TIGRFAM: hydrogenase maturation GTPase HydF; small GTP-binding protein domain.


ensembl_gene_id: DesyoDRAFT_3480
symbol: EHQ90491.1
gene_biotype: protein_coding
description:
  Iron-only hydrogenase maturation rSAM protein HydG; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydG; thiazole biosynthesis protein ThiH.


ensembl_gene_id: DesyoDRAFT_3508
symbol: EHQ90515.1
gene_biotype: protein_coding
description:
  PFAM: Phosphotransferase system, EIIC; EAL domain; TIGRFAM: PTS system, lactose/cellobiose family IIC component.


ensembl_gene_id: DesyoDRAFT_3513
symbol: katG
gene_biotype: protein_coding
description:
  Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: DesyoDRAFT_3521
symbol: EHQ90528.1
gene_biotype: protein_coding
description:
  ATPase family protein associated with various cellular activities (AAA); PFAM: AAA domain (dynein-related subfamily).


ensembl_gene_id: DesyoDRAFT_3531
symbol: EHQ90537.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated.


ensembl_gene_id: DesyoDRAFT_3552
symbol: EHQ90557.1
gene_biotype: protein_coding
description:
  Magnesium-translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase.


ensembl_gene_id: DesyoDRAFT_3554
symbol: EHQ90559.1
gene_biotype: protein_coding
description:
  Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.


ensembl_gene_id: DesyoDRAFT_3556
symbol: EHQ90561.1
gene_biotype: protein_coding
description:
  DNA ligase D; PFAM: Eukaryotic and archaeal DNA primase small subunit; ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, polymerase domain.


ensembl_gene_id: DesyoDRAFT_3564
symbol: EHQ90568.1
gene_biotype: protein_coding
description:
  Ni2+-binding GTPase, urease/hydrogenase maturation protein; PFAM: CobW/HypB/UreG, nucleotide-binding domain.


ensembl_gene_id: DesyoDRAFT_3579
symbol: EHQ90583.1
gene_biotype: protein_coding
description:
  Prevent-host-death family protein; PFAM: Protein of unknown function (DUF820); Phd_YefM; TIGRFAM: prevent-host-death family protein.


ensembl_gene_id: DesyoDRAFT_3581
symbol: EHQ90585.1
gene_biotype: protein_coding
description:
  Putative membrane protein involved in D-alanine export; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: DesyoDRAFT_3585
symbol: EHQ90589.1
gene_biotype: protein_coding
description:
  SNF family Na+-dependent transporter; PFAM: Sodium:neurotransmitter symporter family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: DesyoDRAFT_3593
symbol: EHQ90596.1
gene_biotype: protein_coding
description:
  ABC-type polysaccharide/polyol phosphate export system, permease component; PFAM: ABC-2 type transporter.


ensembl_gene_id: DesyoDRAFT_3596
symbol: EHQ90599.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding; TipAS antibiotic-recognition domain.


ensembl_gene_id: DesyoDRAFT_3620
symbol: EHQ90621.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase.


ensembl_gene_id: DesyoDRAFT_3624
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: DesyoDRAFT_3627
symbol: EHQ90628.1
gene_biotype: protein_coding
description:
  Response regulator containing CheY-like receiver and SARP domains; PFAM: Response regulator receiver domain; Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal.


ensembl_gene_id: DesyoDRAFT_3629
symbol: EHQ90630.1
gene_biotype: protein_coding
description:
  Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG; manually curated.


ensembl_gene_id: DesyoDRAFT_3633
symbol: kup
gene_biotype: protein_coding
description:
  K+ transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: DesyoDRAFT_3674
symbol: EHQ90668.1
gene_biotype: protein_coding
description:
  PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: DesyoDRAFT_3690
symbol: EHQ90683.1
gene_biotype: protein_coding
description:
  PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg); Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: DesyoDRAFT_3692
symbol: EHQ90685.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat.


ensembl_gene_id: DesyoDRAFT_3695
symbol: EHQ90688.1
gene_biotype: protein_coding
description:
  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, subunit C; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_3696
symbol: EHQ90689.1
gene_biotype: protein_coding
description:
  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_3708
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: DesyoDRAFT_3709
symbol: EHQ90701.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: DesyoDRAFT_3710
symbol: EHQ90702.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG.


ensembl_gene_id: DesyoDRAFT_3711
symbol: EHQ90703.1
gene_biotype: protein_coding
description:
  PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG.


ensembl_gene_id: DesyoDRAFT_3712
symbol: EHQ90704.1
gene_biotype: protein_coding
description:
  PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-C/DVULG; CRISPR-associated protein Cas5, N-terminal domain.


ensembl_gene_id: DesyoDRAFT_3713
symbol: EHQ90705.1
gene_biotype: protein_coding
description:
  PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.


ensembl_gene_id: DesyoDRAFT_3716
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: DesyoDRAFT_3720
symbol: EHQ90712.1
gene_biotype: protein_coding
description:
  Uncharacterized protein predicted to be involved in DNA repair; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family.


ensembl_gene_id: DesyoDRAFT_3737
symbol: EHQ90728.1
gene_biotype: protein_coding
description:
  Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat.


ensembl_gene_id: DesyoDRAFT_3746
symbol: EHQ90736.1
gene_biotype: protein_coding
description:
  Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; PFAM: Sigma-54 interaction domain.


ensembl_gene_id: DesyoDRAFT_3747
symbol: EHQ90737.1
gene_biotype: protein_coding
description:
  6Fe-6S prismane cluster-containing protein; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.


ensembl_gene_id: DesyoDRAFT_3771
symbol: EHQ90757.1
gene_biotype: protein_coding
description:
  PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: DesyoDRAFT_3772
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: DesyoDRAFT_3773
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: DesyoDRAFT_3774
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: DesyoDRAFT_3787
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: DesyoDRAFT_3790
symbol: asnS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase.


ensembl_gene_id: DesyoDRAFT_3793
symbol: EHQ90778.1
gene_biotype: protein_coding
description:
  Mismatch repair ATPase (MutS family); PFAM: MutS domain V; MutS domain III; Belongs to the DNA mismatch repair MutS family.


ensembl_gene_id: DesyoDRAFT_3802
symbol: EHQ90787.1
gene_biotype: protein_coding
description:
  Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_3823
symbol: EHQ90808.1
gene_biotype: protein_coding
description:
  Chemotaxis protein histidine kinase-like protein; PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; manually curated.


ensembl_gene_id: DesyoDRAFT_3832
symbol: EHQ90816.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Belongs to the peptidase M24B family.


ensembl_gene_id: DesyoDRAFT_3842
symbol: EHQ90826.1
gene_biotype: protein_coding
description:
  Pyruvate-formate lyase; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase.


ensembl_gene_id: DesyoDRAFT_3843
symbol: EHQ90827.1
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S binding domain; Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family.


ensembl_gene_id: DesyoDRAFT_3844
symbol: EHQ90828.1
gene_biotype: protein_coding
description:
  PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: DesyoDRAFT_3845
symbol: EHQ90829.1
gene_biotype: protein_coding
description:
  glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, beta subunit family, heterotetrameric form.


ensembl_gene_id: DesyoDRAFT_3856
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: DesyoDRAFT_3862
symbol: EHQ90846.1
gene_biotype: protein_coding
description:
  DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; Bacterial SNF2 helicase associated; SWIM zinc finger.


ensembl_gene_id: DesyoDRAFT_3864
symbol: EHQ90847.1
gene_biotype: protein_coding
description:
  Transposase family protein; PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.


ensembl_gene_id: DesyoDRAFT_3866
symbol: EHQ90849.1
gene_biotype: protein_coding
description:
  Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B.


ensembl_gene_id: DesyoDRAFT_3870
symbol: mch
gene_biotype: protein_coding
description:
  Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.


ensembl_gene_id: DesyoDRAFT_3875
symbol: EHQ90857.1
gene_biotype: protein_coding
description:
  N-carbamoylputrescine amidase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase.


ensembl_gene_id: DesyoDRAFT_3876
symbol: EHQ90858.1
gene_biotype: protein_coding
description:
  Peptidylarginine deiminase-like enzyme; PFAM: Porphyromonas-type peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase; Belongs to the agmatine deiminase family.


ensembl_gene_id: DesyoDRAFT_3880
symbol: EHQ90862.1
gene_biotype: protein_coding
description:
  PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; Bacterial SH3 domain; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD.


ensembl_gene_id: DesyoDRAFT_3881
symbol: EHQ90863.1
gene_biotype: protein_coding
description:
  PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit.


ensembl_gene_id: DesyoDRAFT_3886
symbol: EHQ90868.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_3887
symbol: EHQ90869.1
gene_biotype: protein_coding
description:
  PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: DesyoDRAFT_3904
symbol: EHQ90886.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetate (FAA) hydrolase family.


ensembl_gene_id: DesyoDRAFT_3908
symbol: EHQ90890.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase (GGDEF) domain-containing protein; PFAM: HD domain; GGDEF domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain.


ensembl_gene_id: DesyoDRAFT_3927
symbol: EHQ90900.1
gene_biotype: protein_coding
description:
  Putative regulator of cell autolysis; PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: DesyoDRAFT_3928
symbol: EHQ90901.1
gene_biotype: protein_coding
description:
  Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain.


ensembl_gene_id: DesyoDRAFT_3942
symbol: EHQ90915.1
gene_biotype: protein_coding
description:
  NAD(FAD)-dependent dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain.


ensembl_gene_id: DesyoDRAFT_3944
symbol: EHQ90917.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: DesyoDRAFT_3949
symbol: EHQ90922.1
gene_biotype: protein_coding
description:
  Glutaredoxin family protein, arsenate reductase; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; Contains selenocysteine; manually curated; Belongs to the ArsC family.


ensembl_gene_id: DesyoDRAFT_3954
symbol: EHQ90927.1
gene_biotype: protein_coding
description:
  PAS domain S-box; PFAM: CBS domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PAS domain S-box.


ensembl_gene_id: DesyoDRAFT_3955
symbol: EHQ90928.1
gene_biotype: protein_coding
description:
  glycine/D-amino acid oxidase, deaminating; PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase.


ensembl_gene_id: DesyoDRAFT_3958
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: DesyoDRAFT_3959
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: DesyoDRAFT_3976
symbol: EHQ90948.1
gene_biotype: protein_coding
description:
  PFAM: Formiminotransferase domain, N-terminal subdomain; Formiminotransferase domain; TIGRFAM: glutamate formiminotransferase.


ensembl_gene_id: DesyoDRAFT_3984
symbol: EHQ90956.1
gene_biotype: protein_coding
description:
  Addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family.


ensembl_gene_id: DesyoDRAFT_3998
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha chain; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: DesyoDRAFT_4002
symbol: sfsA
gene_biotype: protein_coding
description:
  PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; Belongs to the SfsA family.


ensembl_gene_id: DesyoDRAFT_4012
symbol: EHQ90982.1
gene_biotype: protein_coding
description:
  Putative ABC-type transport system, periplasmic component/surface lipoprotein; PFAM: Basic membrane protein.


ensembl_gene_id: DesyoDRAFT_4016
symbol: EHQ90986.1
gene_biotype: protein_coding
description:
  Export-related chaperone CsaA; PFAM: Putative tRNA binding domain; TIGRFAM: export-related chaperone CsaA.


ensembl_gene_id: DesyoDRAFT_4020
symbol: EHQ90990.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein.


ensembl_gene_id: DesyoDRAFT_4030
symbol: EHQ91000.1
gene_biotype: protein_coding
description:
  Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; manually curated.


ensembl_gene_id: DesyoDRAFT_4032
symbol: EHQ91002.1
gene_biotype: protein_coding
description:
  Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: DesyoDRAFT_4041
symbol: EHQ91011.1
gene_biotype: protein_coding
description:
  TIGR01777 family protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein.


ensembl_gene_id: DesyoDRAFT_4075
symbol: EHQ91041.1
gene_biotype: protein_coding
description:
  ATPase and permease component of ABC-type transporter involved in cytochrome bd biosynthesis; PFAM: ABC transporter; ABC transporter transmembrane region.


ensembl_gene_id: DesyoDRAFT_4079
symbol: EHQ91045.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_4089
symbol: EHQ91055.1
gene_biotype: protein_coding
description:
  ATPase and permease component of ABC-type transporter involved in cytochrome bd biosynthesis; PFAM: ABC transporter transmembrane region; ABC transporter.


ensembl_gene_id: DesyoDRAFT_4090
symbol: EHQ91056.1
gene_biotype: protein_coding
description:
  ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region.


ensembl_gene_id: DesyoDRAFT_4091
symbol: EHQ91057.1
gene_biotype: protein_coding
description:
  ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the ABC transporter superfamily.


ensembl_gene_id: DesyoDRAFT_4106
symbol: EHQ91072.1
gene_biotype: protein_coding
description:
  ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; manually curated.


ensembl_gene_id: DesyoDRAFT_4110
symbol: EHQ91076.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; manually curated; non-canonical start codon; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: DesyoDRAFT_4129
symbol: EHQ91092.1
gene_biotype: protein_coding
description:
  PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon.


ensembl_gene_id: DesyoDRAFT_4136
symbol: EHQ91098.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated; non-canonical start codon.


ensembl_gene_id: DesyoDRAFT_4150
symbol: EHQ91109.1
gene_biotype: protein_coding
description:
  PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nickel ABC transporter, permease subunit NikB.


ensembl_gene_id: DesyoDRAFT_4151
symbol: EHQ91110.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: nickel ABC transporter, nickel/metallophore periplasmic binding protein.


ensembl_gene_id: DesyoDRAFT_4154
symbol: EHQ91113.1
gene_biotype: protein_coding
description:
  ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: nickel ABC transporter, nickel/metallophore periplasmic binding protein.


ensembl_gene_id: DesyoDRAFT_4162
symbol: EHQ91121.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.


ensembl_gene_id: DesyoDRAFT_4166
symbol: EHQ91125.1
gene_biotype: protein_coding
description:
  TIGR03943 family protein; PFAM: Domain of unknown function (DUF1980); TIGRFAM: TIGR03943 family protein.


ensembl_gene_id: DesyoDRAFT_4194
symbol: EHQ91153.1
gene_biotype: protein_coding
description:
  RHS repeat-associated core domain protein; PFAM: Insecticide toxin TcdB middle/C-terminal region; Insecticide toxin TcdB middle/N-terminal region; Salmonella virulence plasmid 65kDa B protein; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).


ensembl_gene_id: DesyoDRAFT_4200
symbol: EHQ91159.1
gene_biotype: protein_coding
description:
  Putative ABC-type exoprotein transport system, permease component; PFAM: Bacterial ABC transporter protein EcsB.


ensembl_gene_id: DesyoDRAFT_4217
symbol: EHQ91175.1
gene_biotype: protein_coding
description:
  Pyrrolysine biosynthesis protein PylD; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; TIGRFAM: pyrrolysine biosynthesis protein PylD.


ensembl_gene_id: DesyoDRAFT_4236
symbol: EHQ91193.1
gene_biotype: protein_coding
description:
  RCC1 domain-containing protein, alpha-tubulin suppressor; PFAM: Regulator of chromosome condensation (RCC1) repeat; Putative cell wall binding repeat 2.


ensembl_gene_id: DesyoDRAFT_4243
symbol: EHQ91200.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, possibly involved in glyoxylate utilization; PFAM: Cupin domain; TIGRFAM: putative allantoin catabolism protein.


ensembl_gene_id: DesyoDRAFT_4245
symbol: EHQ91202.1
gene_biotype: protein_coding
description:
  PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family.


ensembl_gene_id: DesyoDRAFT_4246
symbol: allB
gene_biotype: protein_coding
description:
  Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.


ensembl_gene_id: DesyoDRAFT_4247
symbol: EHQ91204.1
gene_biotype: protein_coding
description:
  Allantoinase; PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase, multifunctional complex type.


ensembl_gene_id: DesyoDRAFT_4248
symbol: EHQ91205.1
gene_biotype: protein_coding
description:
  Amidase, hydantoinase/carbamoylase family; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family.


ensembl_gene_id: DesyoDRAFT_4262
symbol: nuoN
gene_biotype: protein_coding
description:
  Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: DesyoDRAFT_4263
symbol: EHQ91219.1
gene_biotype: protein_coding
description:
  PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.


ensembl_gene_id: DesyoDRAFT_4265
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: DesyoDRAFT_4266
symbol: EHQ91221.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit 6 (chain J); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DesyoDRAFT_4267
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DesyoDRAFT_4268
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit 1 (chain H); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: DesyoDRAFT_4269
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase 49 kD subunit 7; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: DesyoDRAFT_4270
symbol: EHQ91225.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase 27 kD subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: DesyoDRAFT_4271
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: DesyoDRAFT_4272
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit 3 (chain A); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: DesyoDRAFT_4280
symbol: queC
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: DesyoDRAFT_4287
symbol: glmE
gene_biotype: protein_coding
description:
  Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: DesyoDRAFT_4289
symbol: EHQ91244.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase.


ensembl_gene_id: DesyoDRAFT_4308
symbol: carB-2
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.


ensembl_gene_id: DesyoDRAFT_4312
symbol: EHQ91267.1
gene_biotype: protein_coding
description:
  Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain.


ensembl_gene_id: DesyoDRAFT_4317
symbol: EHQ91272.1
gene_biotype: protein_coding
description:
  Putative membrane protein; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein.


ensembl_gene_id: DesyoDRAFT_4328
symbol: EHQ91283.1
gene_biotype: protein_coding
description:
  Hypothetical protein containing a ferredoxin-like domain; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein.


ensembl_gene_id: DesyoDRAFT_4331
symbol: EHQ91286.1
gene_biotype: protein_coding
description:
  Integral membrane protein CcmA involved in cell shape determination; PFAM: Protein of unknown function, DUF583.


ensembl_gene_id: DesyoDRAFT_4345
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: DesyoDRAFT_4346
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: DesyoDRAFT_4350
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: DesyoDRAFT_4351
symbol: EHQ91306.1
gene_biotype: protein_coding
description:
  PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Belongs to the aspartokinase family.


ensembl_gene_id: DesyoDRAFT_4352
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: DesyoDRAFT_4354
symbol: EHQ91309.1
gene_biotype: protein_coding
description:
  Dipicolinic acid synthetase, A subunit; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit.


ensembl_gene_id: DesyoDRAFT_4355
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: DesyoDRAFT_4358
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: DesyoDRAFT_4359
symbol: EHQ91314.1
gene_biotype: protein_coding
description:
  Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.


ensembl_gene_id: DesyoDRAFT_4362
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: DesyoDRAFT_4363
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: DesyoDRAFT_4367
symbol: EHQ91322.1
gene_biotype: protein_coding
description:
  Parallel beta-helix repeat (two copies); PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).


ensembl_gene_id: DesyoDRAFT_4391
symbol: EHQ91346.1
gene_biotype: protein_coding
description:
  DNA-binding protein, excisionase family; PFAM: Prophage CP4-57 regulatory protein (AlpA); TIGRFAM: DNA binding domain, excisionase family.


ensembl_gene_id: DesyoDRAFT_4403
symbol: EHQ91358.1
gene_biotype: protein_coding
description:
  PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain; Belongs to the ribF family.


ensembl_gene_id: DesyoDRAFT_4404
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine 55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_4406
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: DesyoDRAFT_4407
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: DesyoDRAFT_4409
symbol: EHQ91364.1
gene_biotype: protein_coding
description:
  Putative nucleic-acid-binding protein implicated in transcription termination; PFAM: Protein of unknown function (DUF448).


ensembl_gene_id: DesyoDRAFT_4410
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: DesyoDRAFT_4411
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: DesyoDRAFT_4414
symbol: EHQ91369.1
gene_biotype: protein_coding
description:
  PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase.


ensembl_gene_id: DesyoDRAFT_4415
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase, family II; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and i [...]


ensembl_gene_id: DesyoDRAFT_4416
symbol: ispG
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: DesyoDRAFT_4417
symbol: EHQ91372.1
gene_biotype: protein_coding
description:
  Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.


ensembl_gene_id: DesyoDRAFT_4418
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: DesyoDRAFT_4421
symbol: EHQ91376.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: DesyoDRAFT_4423
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: DesyoDRAFT_4425
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: DesyoDRAFT_4426
symbol: rpsB
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: DesyoDRAFT_4428
symbol: codY
gene_biotype: protein_coding
description:
  GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: DesyoDRAFT_4429
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: DesyoDRAFT_4430
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: DesyoDRAFT_4431
symbol: xerC-2
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: DesyoDRAFT_4432
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA:m(5)U-54 methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: DesyoDRAFT_4433
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I, bacterial; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removi [...]


ensembl_gene_id: DesyoDRAFT_4436
symbol: ku
gene_biotype: protein_coding
description:
  Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: DesyoDRAFT_4442
symbol: EHQ91396.1
gene_biotype: protein_coding
description:
  Mg chelatase-related protein; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein.


ensembl_gene_id: DesyoDRAFT_4445
symbol: EHQ91399.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; Belongs to the UPF0102 family.


ensembl_gene_id: DesyoDRAFT_4446
symbol: EHQ91400.1
gene_biotype: protein_coding
description:
  PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N.


ensembl_gene_id: DesyoDRAFT_4448
symbol: EHQ91402.1
gene_biotype: protein_coding
description:
  Proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L.


ensembl_gene_id: DesyoDRAFT_4449
symbol: EHQ91403.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.


ensembl_gene_id: DesyoDRAFT_4450
symbol: EHQ91404.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit 6 (chain J); PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6.


ensembl_gene_id: DesyoDRAFT_4454
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH/F420H2 dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: DesyoDRAFT_4458
symbol: EHQ91412.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: DesyoDRAFT_4460
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: DesyoDRAFT_4462
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: DesyoDRAFT_4463
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: DesyoDRAFT_4465
symbol: rpsP
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: DesyoDRAFT_4466
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: DesyoDRAFT_4467
symbol: EHQ91421.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: DesyoDRAFT_4468
symbol: mtaD
gene_biotype: protein_coding
description:
  Cytosine deaminase-like metal-dependent hydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: DesyoDRAFT_4469
symbol: mtnA
gene_biotype: protein_coding
description:
  S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: DesyoDRAFT_4470
symbol: EHQ91424.1
gene_biotype: protein_coding
description:
  5'-deoxy-5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: DesyoDRAFT_4471
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: DesyoDRAFT_4472
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: DesyoDRAFT_4473
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: DesyoDRAFT_4474
symbol: EHQ91428.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: DesyoDRAFT_4480
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: DesyoDRAFT_4481
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: DesyoDRAFT_4483
symbol: rpmF
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: DesyoDRAFT_4485
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: DesyoDRAFT_4489
symbol: EHQ91443.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmD family; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family.


ensembl_gene_id: DesyoDRAFT_4490
symbol: gpr
gene_biotype: protein_coding
description:
  GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: DesyoDRAFT_4492
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: DesyoDRAFT_4493
symbol: EHQ91447.1
gene_biotype: protein_coding
description:
  PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit.


ensembl_gene_id: DesyoDRAFT_4494
symbol: EHQ91448.1
gene_biotype: protein_coding
description:
  PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit.


ensembl_gene_id: DesyoDRAFT_4498
symbol: rpmB
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: DesyoDRAFT_4499
symbol: hslO
gene_biotype: protein_coding
description:
  Disulfide bond chaperone; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: DesyoDRAFT_4500
symbol: EHQ91454.1
gene_biotype: protein_coding
description:
  PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase; manually curated; non-canonical start codon.


ensembl_gene_id: DesyoDRAFT_4501
symbol: EHQ91455.1
gene_biotype: protein_coding
description:
  PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: DesyoDRAFT_4502
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: DesyoDRAFT_4504
symbol: EHQ91458.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain.


ensembl_gene_id: DesyoDRAFT_4510
symbol: EHQ91464.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: DesyoDRAFT_4512
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: DesyoDRAFT_4513
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: DesyoDRAFT_4514
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: DesyoDRAFT_4517
symbol: EHQ91471.1
gene_biotype: protein_coding
description:
  Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: DesyoDRAFT_4518
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: DesyoDRAFT_4519
symbol: EHQ91473.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: DesyoDRAFT_4520
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: DesyoDRAFT_4523
symbol: EHQ91477.1
gene_biotype: protein_coding
description:
  TIGR00255 family protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein.


ensembl_gene_id: DesyoDRAFT_4527
symbol: EHQ91481.1
gene_biotype: protein_coding
description:
  Arabinose efflux permease family protein; PFAM: Sugar (and other) transporter; Major Facilitator Superfamily; TIGRFAM: metabolite-proton symporter.


ensembl_gene_id: DesyoDRAFT_4539
symbol: EHQ91493.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: DesyoDRAFT_4542
symbol: EHQ91496.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Similar to sarco/endoplasmic reticulum calcium-translocating P-type ATPase/golgi membrane calcium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; golgi membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase.


ensembl_gene_id: DesyoDRAFT_4543
symbol: EHQ91497.1
gene_biotype: protein_coding
description:
  Putative RNA-binding protein, snRNP like protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA).


ensembl_gene_id: DesyoDRAFT_4545
symbol: EHQ91499.1
gene_biotype: protein_coding
description:
  Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit.


ensembl_gene_id: DesyoDRAFT_4546
symbol: EHQ91500.1
gene_biotype: protein_coding
description:
  Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: DesyoDRAFT_4550
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: DesyoDRAFT_4551
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase, subfamily 1; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_4556
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: DesyoDRAFT_4557
symbol: pyrB
gene_biotype: protein_coding
description:
  PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: DesyoDRAFT_4558
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: DesyoDRAFT_4560
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: DesyoDRAFT_4561
symbol: EHQ91515.1
gene_biotype: protein_coding
description:
  Sporulation protein, yteA family; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: sporulation protein, yteA family.


ensembl_gene_id: DesyoDRAFT_4564
symbol: comB
gene_biotype: protein_coding
description:
  Phosphosulfolactate phosphohydrolase-like enzyme; PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase; Belongs to the ComB family.


ensembl_gene_id: DesyoDRAFT_4565
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: DesyoDRAFT_4566
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: DesyoDRAFT_4568
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: DesyoDRAFT_4569
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_4573
symbol: sepF
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: DesyoDRAFT_4574
symbol: EHQ91528.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: DesyoDRAFT_4576
symbol: EHQ91530.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold.


ensembl_gene_id: DesyoDRAFT_4577
symbol: EHQ91531.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB.


ensembl_gene_id: DesyoDRAFT_4578
symbol: EHQ91532.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, YfiH family; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: DesyoDRAFT_4580
symbol: EHQ91534.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: DesyoDRAFT_4581
symbol: EHQ91535.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: DesyoDRAFT_4582
symbol: EHQ91536.1
gene_biotype: protein_coding
description:
  Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: DesyoDRAFT_4584
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: DesyoDRAFT_4587
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: DesyoDRAFT_4590
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: DesyoDRAFT_4591
symbol: EHQ91545.1
gene_biotype: protein_coding
description:
  PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW; Belongs to the SEDS family.


ensembl_gene_id: DesyoDRAFT_4592
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: DesyoDRAFT_4594
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: DesyoDRAFT_4595
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: DesyoDRAFT_4596
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: DesyoDRAFT_4597
symbol: EHQ91551.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D.


ensembl_gene_id: DesyoDRAFT_4599
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: DesyoDRAFT_4605
symbol: EHQ91559.1
gene_biotype: protein_coding
description:
  Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain.


ensembl_gene_id: DesyoDRAFT_4616
symbol: EHQ91570.1
gene_biotype: protein_coding
description:
  PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: DesyoDRAFT_4617
symbol: EHQ91571.1
gene_biotype: protein_coding
description:
  Putative Zn-dependent protease-like protein; PFAM: Putative modulator of DNA gyrase; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_4621
symbol: EHQ91575.1
gene_biotype: protein_coding
description:
  PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB.


ensembl_gene_id: DesyoDRAFT_4623
symbol: EHQ91577.1
gene_biotype: protein_coding
description:
  Putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon; PFAM: Protein of unknown function (DUF342).


ensembl_gene_id: DesyoDRAFT_4625
symbol: bshC
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: DesyoDRAFT_4627
symbol: selA
gene_biotype: protein_coding
description:
  seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: DesyoDRAFT_4634
symbol: EHQ91588.1
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins.


ensembl_gene_id: DesyoDRAFT_4635
symbol: EHQ91589.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: DesyoDRAFT_4637
symbol: EHQ91591.1
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; fagellar hook-basal body proteins.


ensembl_gene_id: DesyoDRAFT_4640
symbol: EHQ91594.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: DesyoDRAFT_4647
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: DesyoDRAFT_4648
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: DesyoDRAFT_4649
symbol: EHQ91603.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: DesyoDRAFT_4650
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: DesyoDRAFT_4651
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: DesyoDRAFT_4654
symbol: EHQ91608.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN.


ensembl_gene_id: DesyoDRAFT_4655
symbol: EHQ91609.1
gene_biotype: protein_coding
description:
  PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.


ensembl_gene_id: DesyoDRAFT_4656
symbol: EHQ91610.1
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: DesyoDRAFT_4659
symbol: EHQ91613.1
gene_biotype: protein_coding
description:
  Flagellar protein export ATPase FliI; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI.


ensembl_gene_id: DesyoDRAFT_4662
symbol: EHQ91616.1
gene_biotype: protein_coding
description:
  Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: DesyoDRAFT_4663
symbol: fliE
gene_biotype: protein_coding
description:
  PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.


ensembl_gene_id: DesyoDRAFT_4664
symbol: EHQ91618.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: DesyoDRAFT_4671
symbol: EHQ91625.1
gene_biotype: protein_coding
description:
  Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: DesyoDRAFT_4677
symbol: csrA-3
gene_biotype: protein_coding
description:
  Carbon storage regulator CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: DesyoDRAFT_4678
symbol: fliW
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: DesyoDRAFT_4680
symbol: EHQ91634.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3.


ensembl_gene_id: DesyoDRAFT_4681
symbol: EHQ91635.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein FlgK; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: DesyoDRAFT_4700
symbol: EHQ91652.1
gene_biotype: protein_coding
description:
  PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family.


ensembl_gene_id: DesyoDRAFT_4702
symbol: EHQ91654.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family.


ensembl_gene_id: DesyoDRAFT_4711
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: DesyoDRAFT_4712
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: DesyoDRAFT_4714
symbol: EHQ91663.1
gene_biotype: protein_coding
description:
  PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: DesyoDRAFT_4720
symbol: EHQ91669.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, SigM family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: DesyoDRAFT_4724
symbol: EHQ91673.1
gene_biotype: protein_coding
description:
  PFAM: Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.


ensembl_gene_id: DesyoDRAFT_4737
symbol: EHQ91683.1
gene_biotype: protein_coding
description:
  PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family; manually curated; non-canonical start codon.


ensembl_gene_id: DesyoDRAFT_4748
symbol: EHQ91692.1
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: DesyoDRAFT_4749
symbol: EHQ91693.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: DesyoDRAFT_4751
symbol: glyS
gene_biotype: protein_coding
description:
  PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit.


ensembl_gene_id: DesyoDRAFT_4752
symbol: glyQ
gene_biotype: protein_coding
description:
  PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit.


ensembl_gene_id: DesyoDRAFT_4759
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_4760
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: DesyoDRAFT_4761
symbol: EHQ91705.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit.


ensembl_gene_id: DesyoDRAFT_4762
symbol: EHQ91706.1
gene_biotype: protein_coding
description:
  ABC-type proline/glycine betaine transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.


ensembl_gene_id: DesyoDRAFT_4763
symbol: EHQ91707.1
gene_biotype: protein_coding
description:
  Osmoprotectant binding protein; PFAM: Substrate binding domain of ABC-type glycine betaine transport system.


ensembl_gene_id: DesyoDRAFT_4764
symbol: EHQ91708.1
gene_biotype: protein_coding
description:
  Cytidine deaminase, homotetrameric; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: DesyoDRAFT_4766
symbol: ybeY
gene_biotype: protein_coding
description:
  Metalloprotein, YbeY/UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: DesyoDRAFT_4767
symbol: EHQ91711.1
gene_biotype: protein_coding
description:
  Putative domain HDIG-containing protein; PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG.


ensembl_gene_id: DesyoDRAFT_4771
symbol: rpsU
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: DesyoDRAFT_4772
symbol: EHQ91716.1
gene_biotype: protein_coding
description:
  HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: Scavenger mRNA decapping enzyme C-term binding.


ensembl_gene_id: DesyoDRAFT_4773
symbol: EHQ91717.1
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family.


ensembl_gene_id: DesyoDRAFT_4774
symbol: EHQ91718.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: DesyoDRAFT_4775
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: DesyoDRAFT_4776
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: DesyoDRAFT_4778
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  [...]


ensembl_gene_id: DesyoDRAFT_4779
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat shock gene repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: DesyoDRAFT_4780
symbol: EHQ91724.1
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: DesyoDRAFT_4781
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: DesyoDRAFT_4786
symbol: EHQ91730.1
gene_biotype: protein_coding
description:
  PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; manually curated; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: DesyoDRAFT_4787
symbol: EHQ91731.1
gene_biotype: protein_coding
description:
  Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.


ensembl_gene_id: DesyoDRAFT_4790
symbol: EHQ91734.1
gene_biotype: protein_coding
description:
  PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: DesyoDRAFT_4791
symbol: EHQ91735.1
gene_biotype: protein_coding
description:
  PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: DesyoDRAFT_4792
symbol: EHQ91736.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: DesyoDRAFT_4793
symbol: EHQ91737.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase alpha chain; nitrogenase molybdenum-iron protein alpha chain.


ensembl_gene_id: DesyoDRAFT_4794
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: DesyoDRAFT_4798
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: DesyoDRAFT_4804
symbol: EHQ91748.1
gene_biotype: protein_coding
description:
  PFAM: SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein.


ensembl_gene_id: DesyoDRAFT_4809
symbol: EHQ91752.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: DesyoDRAFT_4810
symbol: leuS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: DesyoDRAFT_4811
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: DesyoDRAFT_4813
symbol: EHQ91756.1
gene_biotype: protein_coding
description:
  RRM domain-containing RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).


ensembl_gene_id: DesyoDRAFT_4814
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate/nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: DesyoDRAFT_4835
symbol: obg
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: DesyoDRAFT_4837
symbol: rpmA
gene_biotype: protein_coding
description:
  PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: DesyoDRAFT_4838
symbol: EHQ91781.1
gene_biotype: protein_coding
description:
  Putative ribosomal protein; PFAM: Protein of unknown function (DUF464); manually curated; non-canonical start codon.


ensembl_gene_id: DesyoDRAFT_4839
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: DesyoDRAFT_4841
symbol: EHQ91784.1
gene_biotype: protein_coding
description:
  Cell wall-binding protein; PFAM: Leucine Rich Repeat; Putative cell wall binding repeat 2; Bacterial Ig-like domain (group 4).


ensembl_gene_id: DesyoDRAFT_4855
symbol: EHQ91798.1
gene_biotype: protein_coding
description:
  Hypothetical protein containing a ferredoxin-like domain; PFAM: Uncharacterised ACR, YkgG family COG1556.


ensembl_gene_id: DesyoDRAFT_4863
symbol: EHQ91806.1
gene_biotype: protein_coding
description:
  UDP-glucose-4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: DesyoDRAFT_4872
symbol: lolD
gene_biotype: protein_coding
description:
  ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: DesyoDRAFT_4874
symbol: EHQ91817.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: DesyoDRAFT_4875
symbol: EHQ91818.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase, short form; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: DesyoDRAFT_4877
symbol: EHQ91820.1
gene_biotype: protein_coding
description:
  Putative dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.


ensembl_gene_id: DesyoDRAFT_4879
symbol: EHQ91822.1
gene_biotype: protein_coding
description:
  PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: DesyoDRAFT_4880
symbol: EHQ91823.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.


ensembl_gene_id: DesyoDRAFT_4907
symbol: EHQ91849.1
gene_biotype: protein_coding
description:
  Mg chelatase-related protein; PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein.


ensembl_gene_id: DesyoDRAFT_4915
symbol: EHQ91856.1
gene_biotype: protein_coding
description:
  PFAM: UDP-galactopyranose mutase; FAD dependent oxidoreductase; TIGRFAM: UDP-galactopyranose mutase.


ensembl_gene_id: DesyoDRAFT_4928
symbol: EHQ91868.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: DesyoDRAFT_4938
symbol: EHQ91878.1
gene_biotype: protein_coding
description:
  Ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.


ensembl_gene_id: DesyoDRAFT_4939
symbol: EHQ91879.1
gene_biotype: protein_coding
description:
  Radical SAM-linked protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein.


ensembl_gene_id: DesyoDRAFT_4943
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: DesyoDRAFT_4944
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: DesyoDRAFT_4946
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: DesyoDRAFT_4947
symbol: EHQ91887.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.


ensembl_gene_id: DesyoDRAFT_4951
symbol: EHQ91891.1
gene_biotype: protein_coding
description:
  DNA repair protein radc; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; Belongs to the UPF0758 family.


ensembl_gene_id: DesyoDRAFT_4952
symbol: EHQ91892.1
gene_biotype: protein_coding
description:
  MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: DesyoDRAFT_4955
symbol: EHQ91895.1
gene_biotype: protein_coding
description:
  PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: DesyoDRAFT_4956
symbol: rex
gene_biotype: protein_coding
description:
  AT-rich DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: DesyoDRAFT_4959
symbol: EHQ91899.1
gene_biotype: protein_coding
description:
  Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein.


ensembl_gene_id: DesyoDRAFT_4960
symbol: EHQ91900.1
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: DesyoDRAFT_4961
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: DesyoDRAFT_4970
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC/EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: DesyoDRAFT_4971
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: DesyoDRAFT_4972
symbol: EHQ91912.1
gene_biotype: protein_coding
description:
  ATP-dependent protease LonB; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease.


ensembl_gene_id: DesyoDRAFT_4973
symbol: clpX
gene_biotype: protein_coding
description:
  Endopeptidase Clp ATP-binding regulatory subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: DesyoDRAFT_4974
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: DesyoDRAFT_4983
symbol: EHQ91918.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: DesyoDRAFT_4984
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: DesyoDRAFT_4993
symbol: EHQ91928.1
gene_biotype: protein_coding
description:
  PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region.


ensembl_gene_id: DesyoDRAFT_4994
symbol: EHQ91929.1
gene_biotype: protein_coding
description:
  PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region.


ensembl_gene_id: DesyoDRAFT_4995
symbol: EHQ91930.1
gene_biotype: protein_coding
description:
  holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: holo-ACP synthase CitX; triphosphoribosyl-dephospho-CoA synthase CitG.


ensembl_gene_id: DesyoDRAFT_4996
symbol: EHQ91931.1
gene_biotype: protein_coding
description:
  (citrate (pro-3S)-lyase) ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: DesyoDRAFT_5003
symbol: EHQ91938.1
gene_biotype: protein_coding
description:
  PFAM: Methylaspartate ammonia-lyase C-terminus; Methylaspartate ammonia-lyase N-terminus; TIGRFAM: methylaspartate ammonia-lyase.


ensembl_gene_id: DesyoDRAFT_5006
symbol: glmS-2
gene_biotype: protein_coding
description:
  Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: DesyoDRAFT_5013
symbol: macB
gene_biotype: protein_coding
description:
  ABC-type antimicrobial peptide transport system, ATPase component; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: DesyoDRAFT_5032
symbol: EHQ91967.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.


ensembl_gene_id: DesyoDRAFT_5045
symbol: EHQ91979.1
gene_biotype: protein_coding
description:
  PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD.


ensembl_gene_id: DesyoDRAFT_5046
symbol: EHQ91980.1
gene_biotype: protein_coding
description:
  Subtilisin-like serine protease; PFAM: Putative cell wall binding repeat 2; Subtilase family; Belongs to the peptidase S8 family.


ensembl_gene_id: DesyoDRAFT_5051
symbol: EHQ91985.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF3473); Polysaccharide deacetylase; TIGRFAM: polysaccharide deactylase family protein, PEP-CTERM locus subfamily.


ensembl_gene_id: DesyoDRAFT_5061
symbol: EHQ91995.1
gene_biotype: protein_coding
description:
  D-alanyl-lipoteichoic acid biosynthesis protein DltB; Could be involved in the transport of activated D-alanine through the membrane.


ensembl_gene_id: DesyoDRAFT_5062
symbol: dltA
gene_biotype: protein_coding
description:
  Amino acid adenylation enzyme/thioester reductase family protein; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell w [...]


ensembl_gene_id: DesyoDRAFT_5064
symbol: EHQ91998.1
gene_biotype: protein_coding
description:
  D-alanyl-lipoteichoic acid biosynthesis protein DltD; PFAM: DltD N-terminal region; DltD central region; DltD C-terminal region; TIGRFAM: D-alanyl-lipoteichoic acid biosynthesis protein DltD.


ensembl_gene_id: DesyoDRAFT_5065
symbol: dltC
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.


ensembl_gene_id: DesyoDRAFT_5066
symbol: EHQ92000.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.


ensembl_gene_id: DesyoDRAFT_5067
symbol: EHQ92001.1
gene_biotype: protein_coding
description:
  PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: DesyoDRAFT_5079
symbol: EHQ92013.1
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: DesyoDRAFT_5086
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: DesyoDRAFT_5087
symbol: EHQ92021.1
gene_biotype: protein_coding
description:
  Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Male sterility protein; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; thioester reductase domain; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: DesyoDRAFT_5097
symbol: EHQ92031.1
gene_biotype: protein_coding
description:
  Putative membrane protein; PFAM: Protein of unknown function (DUF445); overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_5110
symbol: EHQ92044.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth).


ensembl_gene_id: DesyoDRAFT_5127
symbol: EHQ92061.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein; PFAM: Ethanolamine utilisation - propanediol utilisation; TIGRFAM: ethanolamine utilization protein, EutP; overlaps another CDS with the same product name; Belongs to the EutP/PduV family.


ensembl_gene_id: DesyoDRAFT_5128
symbol: EHQ92062.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein; PFAM: BMC domain; overlaps another CDS with the same product name.


ensembl_gene_id: DesyoDRAFT_5129
symbol: cutD
gene_biotype: protein_coding
description:
  Glycyl-radical enzyme activator family protein; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM).


ensembl_gene_id: DesyoDRAFT_5132
symbol: cutC
gene_biotype: protein_coding
description:
  Pyruvate-formate lyase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.


ensembl_gene_id: DesyoDRAFT_5136
symbol: EHQ92070.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; PFAM: Thioredoxin; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.


ensembl_gene_id: DesyoDRAFT_5147
symbol: EHQ92080.1
gene_biotype: protein_coding
description:
  PFAM: Phage uncharacterised protein (Phage_XkdX); TIGRFAM: phage uncharacterized protein, XkdX family.


ensembl_gene_id: DesyoDRAFT_5168
symbol: EHQ92100.1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase specialized sigma subunit, sigma24; PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: DesyoDRAFT_5174
symbol: EHQ92105.1
gene_biotype: protein_coding
description:
  Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain; LysM domain.


ensembl_gene_id: DesyoDRAFT_5235
symbol: EHQ92165.1
gene_biotype: protein_coding
description:
  Single stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: DesyoDRAFT_5262
symbol: EHQ92190.1
gene_biotype: protein_coding
description:
  Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain; manually curated.


ensembl_gene_id: DesyoDRAFT_5264
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: DesyoDRAFT_5267
symbol: EHQ92195.1
gene_biotype: protein_coding
description:
  Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: DesyoDRAFT_5269
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: DesyoDRAFT_5270
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: DesyoDRAFT_5271
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: DesyoDRAFT_5279
symbol: EHQ92207.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit.


ensembl_gene_id: DesyoDRAFT_5281
symbol: EHQ92209.1
gene_biotype: protein_coding
description:
  Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: DesyoDRAFT_5286
symbol: EHQ92214.1
gene_biotype: protein_coding
description:
  PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.


ensembl_gene_id: DesyoDRAFT_5287
symbol: EHQ92215.1
gene_biotype: protein_coding
description:
  Transcriptional regulator with sigma factor-related N-terminal domain; PFAM: Sigma-70, region 4; Putative sugar-binding domain.


ensembl_gene_id: DesyoDRAFT_5288
symbol: EHQ92216.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor.


ensembl_gene_id: DesyoDRAFT_5290
symbol: EHQ92218.1
gene_biotype: protein_coding
description:
  Hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: DesyoDRAFT_5294
symbol: EHQ92222.1
gene_biotype: protein_coding
description:
  Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase.


ensembl_gene_id: DesyoDRAFT_5295
symbol: EHQ92223.1
gene_biotype: protein_coding
description:
  PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB.


ensembl_gene_id: DesyoDRAFT_5296
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: DesyoDRAFT_5297
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: DesyoDRAFT_5303
symbol: EHQ92231.1
gene_biotype: protein_coding
description:
  Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: DesyoDRAFT_5304
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: DesyoDRAFT_5305
symbol: EHQ92233.1
gene_biotype: protein_coding
description:
  Transketolase, alpha subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.


ensembl_gene_id: DesyoDRAFT_5307
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: DesyoDRAFT_5308
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: DesyoDRAFT_5310
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosome-associated protein Y (PSrp-1); Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: DesyoDRAFT_5316
symbol: EHQ92244.1
gene_biotype: protein_coding
description:
  Putative amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.


ensembl_gene_id: DesyoDRAFT_5317
symbol: EHQ92245.1
gene_biotype: protein_coding
description:
  Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.


ensembl_gene_id: DesyoDRAFT_5320
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: DesyoDRAFT_5323
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: DesyoDRAFT_5324
symbol: EHQ92252.1
gene_biotype: protein_coding
description:
  Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: DesyoDRAFT_5331
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase, F1 epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: DesyoDRAFT_5332
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase, F1 beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: DesyoDRAFT_5333
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase, F1 gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: DesyoDRAFT_5334
symbol: atpA
gene_biotype: protein_coding
description:
  Proton translocating ATP synthase, F1 alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: DesyoDRAFT_5335
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase, F1 delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: DesyoDRAFT_5336
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase, F0 subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: DesyoDRAFT_5337
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase, F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: DesyoDRAFT_5343
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: DesyoDRAFT_5344
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: DesyoDRAFT_5345
symbol: EHQ92273.1
gene_biotype: protein_coding
description:
  TIGR01440 family protein; PFAM: Protein of unknown function (DUF436); TIGRFAM: TIGR01440 family protein; Belongs to the UPF0340 family.


ensembl_gene_id: DesyoDRAFT_5346
symbol: EHQ92274.1
gene_biotype: protein_coding
description:
  PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.


ensembl_gene_id: DesyoDRAFT_5348
symbol: mntP
gene_biotype: protein_coding
description:
  Putative membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: DesyoDRAFT_5349
symbol: EHQ92277.1
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: DesyoDRAFT_5350
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: DesyoDRAFT_5351
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: DesyoDRAFT_5353
symbol: EHQ92281.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II.


ensembl_gene_id: DesyoDRAFT_5354
symbol: tal
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase, TalC/MipB family; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: DesyoDRAFT_5355
symbol: EHQ92283.1
gene_biotype: protein_coding
description:
  PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist.


ensembl_gene_id: DesyoDRAFT_5360
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: DesyoDRAFT_5361
symbol: EHQ92289.1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: DesyoDRAFT_5362
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase.


ensembl_gene_id: DesyoDRAFT_5365
symbol: EHQ92293.1
gene_biotype: protein_coding
description:
  Spore cortex-lytic enzyme; PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme.


ensembl_gene_id: DesyoDRAFT_5372
symbol: EHQ92300.1
gene_biotype: protein_coding
description:
  ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: DesyoDRAFT_5376
symbol: glnS
gene_biotype: protein_coding
description:
  glutaminyl-tRNA synthetase/glutamyl-tRNA synthetase, archaeal and eukaryotic family; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutamyl-tRNA synthetase, archaeal and eukaryotic family; glutaminyl-tRNA synthetase.


ensembl_gene_id: DesyoDRAFT_5380
symbol: EHQ92308.1
gene_biotype: protein_coding
description:
  six-Cys-in-45 modification radical SAM protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; six-Cys-in-45 modification radical SAM protein.


ensembl_gene_id: DesyoDRAFT_5384
symbol: EHQ92311.1
gene_biotype: protein_coding
description:
  Mn2+/Fe2_ transporter, NRAMP family; PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters.


ensembl_gene_id: DesyoDRAFT_5394
symbol: EHQ92320.1
gene_biotype: protein_coding
description:
  PFAM: Conserved phage C-terminus (Phg_2220_C); Ribbon-helix-helix protein, copG family; TIGRFAM: phage conserved hypothetical protein, C-terminal domain.


ensembl_gene_id: DesyoDRAFT_5405
symbol: EHQ92330.1
gene_biotype: protein_coding
description:
  Helicase, type I site-specific restriction-modification system restriction subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Helicase conserved C-terminal domain; Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit.


ensembl_gene_id: DesyoDRAFT_5407
symbol: EHQ92332.1
gene_biotype: protein_coding
description:
  Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.


ensembl_gene_id: DesyoDRAFT_5420
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: DesyoDRAFT_5423
symbol: EHQ92342.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: DesyoDRAFT_5424
symbol: EHQ92343.1
gene_biotype: protein_coding
description:
  ATP-dependent protease, Lon family; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease, Lon family.


ensembl_gene_id: DesyoDRAFT_5428
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: DesyoDRAFT_5429
symbol: EHQ92348.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: DesyoDRAFT_5431
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: DesyoDRAFT_5443
symbol: EHQ92362.1
gene_biotype: protein_coding
description:
  PFAM: Elongation factor Tu domain 2; Elongation factor SelB, winged helix; Elongation factor Tu GTP binding domain; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU.


ensembl_gene_id: DesyoDRAFT_5447
symbol: EHQ92366.1
gene_biotype: protein_coding
description:
  Uncharacterized membrane protein, possible Na+ channel or pump; PFAM: Protein of unknown function (DUF554).


ensembl_gene_id: DesyoDRAFT_5448
symbol: EHQ92367.1
gene_biotype: protein_coding
description:
  ParB-like partition protein; PFAM: Helix-turn-helix; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.


ensembl_gene_id: DesyoDRAFT_5451
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: DesyoDRAFT_5452
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: DesyoDRAFT_5453
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: DesyoDRAFT_5455
symbol: EHQ92374.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YidC; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain.


ensembl_gene_id: DesyoDRAFT_5456
symbol: EHQ92375.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: DesyoDRAFT_5457
symbol: rnpA
gene_biotype: protein_coding
description:
  RNase P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


