# geneInfo

ensembl_gene_id: HMPREF9080_00002
symbol: EHM56181.1
gene_biotype: protein_coding
description:
  KEGG: hiq:CGSHiGG_06730 1.2e-214 glpA; sn-glycerol-3-phosphate dehydrogenase subunit A K02445; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00005
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF9080_00011
symbol: EHM56190.1
gene_biotype: protein_coding
description:
  Peptidase, S41 family; KEGG: dno:DNO_0543 6.7e-116 carboxyl-terminal protease family protein K03797; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the peptidase S41A family.


ensembl_gene_id: HMPREF9080_00012
symbol: EHM56191.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aav:Aave_2610 1.7e-09 carbamoyl-phosphate synthase, small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00013
symbol: EHM56192.1
gene_biotype: protein_coding
description:
  Macro domain protein; KEGG: noc:Noc_1830 3.3e-50 Appr-1-p processing; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00015
symbol: EHM56194.1
gene_biotype: protein_coding
description:
  Choline ABC transporter, ATP-binding protein OpuBA family protein; KEGG: san:gbs2088 1.4e-69 hypothetical protein; K02000 glycine betaine/proline transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00016
symbol: EHM56195.1
gene_biotype: protein_coding
description:
  NmrA family protein; KEGG: rha:RHA1_ro02137 1.3e-30 nucleoside-diphosphate-sugar epimerase; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_00018
symbol: EHM56197.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate-binding protein, QAT family; KEGG: lmf:LMOf2365_1441 5.5e-128 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00019
symbol: EHM56171.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0251 6.5e-173 recC; exodeoxyribonuclease V, gamma subunit K03583; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00020
symbol: EHM56172.1
gene_biotype: protein_coding
description:
  Putative nicotinamide-nucleotide adenylyltransferase; KEGG: hch:HCH_06993 3.5e-71 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase K13522; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00022
symbol: EHM56174.1
gene_biotype: protein_coding
description:
  Alpha,alpha-phosphotrehalase; KEGG: cbl:CLK_1441 3.0e-175 treC; alpha,alpha-phosphotrehalase K01226; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00023
symbol: EHM56175.1
gene_biotype: protein_coding
description:
  KEGG: bhy:BHWA1_00503 1.1e-177 trehalose PTS system, IIABC component; K02817 PTS system, trehalose-specific IIA component; K02818 PTS system, trehalose-specific IIB component K02819; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00024
symbol: EHM56176.1
gene_biotype: protein_coding
description:
  Phosphotransferase system, EIIB; KEGG: efa:EF2213 4.4e-21 PTS system, IIBC components; K02818 PTS system, trehalose-specific IIB component K02819; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_00025
symbol: EHM56177.1
gene_biotype: protein_coding
description:
  FMN-binding domain protein; KEGG: eci:UTI89_C1055 1.4e-15 yccM; putative electron transport protein YccM; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00026
symbol: EHM56178.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit II, periplasmic domain protein; KEGG: bpt:Bpet4339 3.7e-273 nosZ; nitrous-oxide reductase K00376; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_00028
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: HMPREF9080_00029
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: HMPREF9080_00030
symbol: EHM56125.1
gene_biotype: protein_coding
description:
  PAS domain S-box protein; KEGG: ctu:Ctu_04770 3.4e-26 aer; aerotaxis receptor K03776; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00032
symbol: rep
gene_biotype: protein_coding
description:
  Putative ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: HMPREF9080_00033
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HMPREF9080_00034
symbol: EHM56129.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, YfiH family; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: HMPREF9080_00036
symbol: EHM56130.1
gene_biotype: protein_coding
description:
  L-asparaginase, type I; KEGG: csa:Csal_2037 2.9e-51 asparaginase K01424; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00037
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMPREF9080_00038
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: HMPREF9080_00039
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: HMPREF9080_00041
symbol: EHM56135.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cha:CHAB381_1693 2.2e-08 putative beta-lactamase HcpC (cysteine-richprotein C) K07126.


ensembl_gene_id: HMPREF9080_00043
symbol: EHM56137.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_1634 1.7e-07 FxsA cytoplasmic membrane protein K07113; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00044
symbol: EHM56138.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF9080_00047
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: HMPREF9080_00058
symbol: EHM56152.1
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP diphosphatase; KEGG: apa:APP7_2115 1.6e-34 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase; Psort location: Cytoplasmic, score: 9.97; Belongs to the HisA/HisF family.


ensembl_gene_id: HMPREF9080_00061
symbol: EHM56155.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2125 2.3e-12 transcriptional regulator, AraC family; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00063
symbol: EHM56157.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00064
symbol: EHM56158.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00065
symbol: EHM56159.1
gene_biotype: protein_coding
description:
  DNA-binding helix-turn-helix protein; KEGG: sco:SCO5998 0.00085 murA2, SCBAC1C11.01c, StBAC16H6.33c; UDP-N-acetylglucosamine transferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase.


ensembl_gene_id: HMPREF9080_00067
symbol: EHM56161.1
gene_biotype: protein_coding
description:
  KEGG: pva:Pvag_1909 1.5e-22 putative ABC transport system, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00068
symbol: EHM56162.1
gene_biotype: protein_coding
description:
  KEGG: pva:Pvag_0007 1.1e-21 putative ABC transport system, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00069
symbol: EHM56163.1
gene_biotype: protein_coding
description:
  Putative histidine ABC transporter, periplasmic histidine-binding protein HisJ; KEGG: mct:MCR_1692 9.0e-41 extracellular solute-binding protein family 3; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HMPREF9080_00071
symbol: EHM56165.1
gene_biotype: protein_coding
description:
  KEGG: vco:VC0395_A1455 1.1e-69 amino acid ABC transporter, ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00072
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: HMPREF9080_00079
symbol: EHM56106.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sgr:SGR_5983 1.9e-10 putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase.


ensembl_gene_id: HMPREF9080_00080
symbol: EHM56107.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0315 3.3e-162 fabB; beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: HMPREF9080_00081
symbol: fabA
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: HMPREF9080_00082
symbol: EHM56109.1
gene_biotype: protein_coding
description:
  Peptidoglycan binding domain protein; KEGG: ddd:Dda3937_03653 5.0e-47 ycbB; putative carboxypeptidase.


ensembl_gene_id: HMPREF9080_00084
symbol: EHM56111.1
gene_biotype: protein_coding
description:
  Aminotransferase, class I/II; KEGG: mlo:mll0405 1.4e-97 aromatic amino acid aminotransferase K00832; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00086
symbol: EHM56113.1
gene_biotype: protein_coding
description:
  Threonine synthase; KEGG: dra:DR_A0360 1.1e-156 threonine synthase K01733; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00087
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF9080_00088
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HMPREF9080_00093
symbol: EHM56120.1
gene_biotype: protein_coding
description:
  KEGG: pen:PSEEN0163 7.8e-161 ABC transporter, ATP-binding protein K06158; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00097
symbol: EHM56102.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2225 4.7e-35 ABC transporter, membrane spanning protein, zinc K09816; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00098
symbol: EHM56103.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tgo:TGME49_022370 0.0026 SRS domain-containing protein; Psort location: Extracellular, score: 9.65.


ensembl_gene_id: HMPREF9080_00099
symbol: EHM56075.1
gene_biotype: protein_coding
description:
  KEGG: lsa:LSA1349 1.4e-33 GNAT family N-acetyltransferase; K00680; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00101
symbol: EHM56077.1
gene_biotype: protein_coding
description:
  Putative sulfate transport protein CysZ; KEGG: bme:BMEI1781 0.00012 CysZ-like protein K06203; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00102
symbol: EHM56078.1
gene_biotype: protein_coding
description:
  Hydrogen peroxide-inducible protein activator domain protein; KEGG: mct:MCR_0286 1.6e-27 LysR family transcriptional regulator K04761; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00105
symbol: EHM56081.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: HMPREF9080_00106
symbol: EHM56082.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0144 2.2e-181 alkyl hydroperoxide reductase, F subunit; K03387 alkyl hydroperoxide reductase subunit F; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_00108
symbol: EHM56084.1
gene_biotype: protein_coding
description:
  KEGG: ilo:IL0186 5.1e-283 nitric oxide reductase large subunit; K04561 nitric-oxide reductase, cytochrome b-containing subunit I; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00110
symbol: EHM56086.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmD family; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: HMPREF9080_00111
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMPREF9080_00113
symbol: rpsP
gene_biotype: protein_coding
description:
  Ribosomal protein S16; KEGG: apb:SAR116_1817 2.2e-14 ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: HMPREF9080_00114
symbol: EHM56090.1
gene_biotype: protein_coding
description:
  KEGG: ctu:Ctu_31950 1.0e-16 rimM; 16S rRNA-processing protein RimM K02860; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00115
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF9080_00116
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF9080_00117
symbol: EHM56093.1
gene_biotype: protein_coding
description:
  KEGG: mca:MCA2983 3.4e-41 cysQ; 3'(2'),5'-bisphosphate nucleotidase K03677; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00118
symbol: EHM56094.1
gene_biotype: protein_coding
description:
  Acyltransferase; KEGG: xca:xccb100_0535 1.3e-46 plsC3; putative 1-acylglycerol-3-phosphate O-acyltransferase.


ensembl_gene_id: HMPREF9080_00119
symbol: EHM56095.1
gene_biotype: protein_coding
description:
  KEGG: aat:D11S_0259 9.3e-94 phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00120
symbol: EHM56096.1
gene_biotype: protein_coding
description:
  Ser/Thr phosphatase family protein; KEGG: bbt:BBta_4241 2.4e-15 putative metallophosphoesterase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00121
symbol: EHM56097.1
gene_biotype: protein_coding
description:
  KEGG: cja:CJA_1513 2.1e-96 nspC; carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00128
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9080_00129
symbol: EHM56049.1
gene_biotype: protein_coding
description:
  KEGG: mca:MCA2988 8.9e-18 folB; dihydroneopterin aldolase K01633; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00130
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: HMPREF9080_00132
symbol: rppH
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: HMPREF9080_00133
symbol: EHM56053.1
gene_biotype: protein_coding
description:
  Iron/manganese ABC transporter, periplasmic iron/manganese-binding protein; KEGG: saj:SaurJH9_2430 6.3e-19 ribulose-phosphate 3-epimerase K01783; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: HMPREF9080_00134
symbol: EHM56054.1
gene_biotype: protein_coding
description:
  KEGG: xbo:XBJ1_2403 7.3e-78 chelated iron transport system membrane protein YfeB K09820; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00135
symbol: EHM56055.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2225 4.0e-22 ABC transporter, membrane spanning protein, zinc K09816; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00136
symbol: EHM56056.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2225 6.1e-19 ABC transporter, membrane spanning protein, zinc K09816; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00138
symbol: EHM56058.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dya:Dyak_GE17938 3.5e-05 GE17938 gene product from transcript GE17938-RA; K11833 ubiquitin carboxyl-terminal hydrolase 2/21; Psort location: Extracellular, score: 9.65.


ensembl_gene_id: HMPREF9080_00141
symbol: EHM56060.1
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: HMPREF9080_00142
symbol: EHM56061.1
gene_biotype: protein_coding
description:
  Anaerobic C4-dicarboxylate transporter DcuC; KEGG: ccv:CCV52592_2073 1.2e-24 orotate phosphoribosyltransferase (OprT) (oprtase); Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00144
symbol: EHM56063.1
gene_biotype: protein_coding
description:
  Amidohydrolase; KEGG: dge:Dgeo_0208 3.8e-49 peptidase M20D, amidohydrolase K01436; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_00148
symbol: EHM56067.1
gene_biotype: protein_coding
description:
  KEGG: ppw:PputW619_0642 5.2e-61 pseudouridine synthase; K06181 ribosomal large subunit pseudouridine synthase E; Psort location: Cytoplasmic, score: 9.26; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: HMPREF9080_00149
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: HMPREF9080_00150
symbol: trpC
gene_biotype: protein_coding
description:
  KEGG: aav:Aave_0586 2.5e-68 trpC; indole-3-glycerol-phosphate synthase K01609; Psort location: Cytoplasmic, score: 9.97; Belongs to the TrpC family.


ensembl_gene_id: HMPREF9080_00154
symbol: EHM56073.1
gene_biotype: protein_coding
description:
  KamA family protein; KEGG: xau:Xaut_3908 1.0e-71 lysine 2,3-aminomutase YodO family protein K01843; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00157
symbol: EHM56022.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dan:Dana_GF22418 0.0029 GF22418 gene product from transcript GF22418-RA; K04498 E1A/CREB-binding protein; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_00159
symbol: EHM56024.1
gene_biotype: protein_coding
description:
  Toluene tolerance protein Ttg2A; KEGG: pha:PSHAa2544 3.3e-75 ABC transporter ATP-binding protein K02065; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00160
symbol: EHM56025.1
gene_biotype: protein_coding
description:
  Putative toluene tolerance protein Ttg2B; KEGG: apb:SAR116_0647 1.0e-39 ABC-type transport system involved in resistance to organic solvents K02066; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00165
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF9080_00166
symbol: EHM56031.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 1.9e-54 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00167
symbol: EHM56032.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HMPREF9080_00168
symbol: EHM56033.1
gene_biotype: protein_coding
description:
  Cytochrome b/b6/petD; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HMPREF9080_00169
symbol: EHM56034.1
gene_biotype: protein_coding
description:
  Cytochrome C1 family protein; KEGG: xal:XALc_1266 3.4e-57 putative ubiquinol-cytochrome c reductase, cytochrome c1 subunit oxidoreductase protein K00413.


ensembl_gene_id: HMPREF9080_00170
symbol: EHM56035.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0851 5.3e-36 stringent starvation protein A K03599; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00177
symbol: EHM56042.1
gene_biotype: protein_coding
description:
  Putative membrane protein; KEGG: zmo:ZMO1971 1.8e-05 panC; pantoate--beta-alanine ligase; K01918 pantoate--beta-alanine ligase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00179
symbol: EHM56044.1
gene_biotype: protein_coding
description:
  Tat pathway signal sequence domain protein; KEGG: apb:SAR116_0501 7.4e-13 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00180
symbol: EHM56019.1
gene_biotype: protein_coding
description:
  POTRA domain protein, ShlB-type; KEGG: cco:CCC13826_0608 3.0e-56 ATP phosphoribosyltransferase (ATP-PRTase; ATP-PRT); Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00181
symbol: EHM56020.1
gene_biotype: protein_coding
description:
  Filamentous hemagglutinin family domain protein; KEGG: eci:UTI89_C4946 5.3e-105 ShlA/HecA/FhaA exofamily protein; Psort location: OuterMembrane, score: 9.95.


ensembl_gene_id: HMPREF9080_00185
symbol: EHM56002.1
gene_biotype: protein_coding
description:
  Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: HMPREF9080_00186
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; KEGG: dno:DNO_0112 8.7e-59 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00187
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMPREF9080_00188
symbol: EHM56005.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; KEGG: msi:Msm_0789 8.4e-22 cation efflux system protein (zinc/cadmium/cobalt); Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00190
symbol: EHM56007.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hip:CGSHiEE_01470 1.9e-109 aspS; aspartyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00191
symbol: EHM56008.1
gene_biotype: protein_coding
description:
  GHMP kinase protein; KEGG: las:CLIBASIA_04600 9.6e-37 GHMP kinase; K00869 mevalonate kinase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00193
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: HMPREF9080_00194
symbol: EHM56011.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0797 4.2e-114 hydroxymethylglutaryl-coenzyme A reductase K00021; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00197
symbol: EHM56014.1
gene_biotype: protein_coding
description:
  KEGG: pha:PSHAa1698 6.9e-185 ABC transporter ATP-binding/permease protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00199
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine transporter SstT; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HMPREF9080_00201
symbol: EHM56018.1
gene_biotype: protein_coding
description:
  KEGG: mno:Mnod_1733 1.8e-90 penicillin-binding protein 1C; K05367 penicillin-binding protein 1C; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00202
symbol: EHM55989.1
gene_biotype: protein_coding
description:
  KEGG: rpf:Rpic12D_1099 7.6e-28 peptidyl-prolyl cis-trans isomerase cyclophilin type; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B); Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00203
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HMPREF9080_00205
symbol: EHM55992.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sti:Sthe_0042 0.0046 cytidyltransferase-related domain protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase.


ensembl_gene_id: HMPREF9080_00207
symbol: EHM55994.1
gene_biotype: protein_coding
description:
  Bacterial stress protein; KEGG: ske:Sked_35510 0.0054 DNA polymerase III epsilon subunit-like 3'-5' exonuclease; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00209
symbol: EHM55996.1
gene_biotype: protein_coding
description:
  Bacterial stress protein; KEGG: rha:RHA1_ro01831 9.0e-05 DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00214
symbol: EHM56001.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_2227 6.8e-20 periplasmic solute binding protein K09815; Psort location: Periplasmic, score: 9.44.


ensembl_gene_id: HMPREF9080_00216
symbol: EHM55967.1
gene_biotype: protein_coding
description:
  Putative protein AmpD; KEGG: kpe:KPK_4628 3.2e-36 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00217
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: HMPREF9080_00220
symbol: tatA
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: HMPREF9080_00221
symbol: EHM55972.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0448 1.8e-163 pta; phosphate acetyltransferase K13788; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00223
symbol: ackA
gene_biotype: protein_coding
description:
  Putative acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMPREF9080_00227
symbol: EHM55978.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0664 1.4e-21 molybdopterin binding domain protein; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00228
symbol: EHM55979.1
gene_biotype: protein_coding
description:
  Putative membrane protein; KEGG: apb:SAR116_2175 0.00052 RarD protein, DMT superfamily transporter K05786; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00229
symbol: EHM55980.1
gene_biotype: protein_coding
description:
  Putative protein disulfide isomerase II; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: HMPREF9080_00231
symbol: EHM55982.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase protein; KEGG: aap:NT05HA_1715 1.3e-96 3-oxoacyl-[acyl-carrier-protein] synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: HMPREF9080_00233
symbol: EHM55984.1
gene_biotype: protein_coding
description:
  KEGG: bpm:BURPS1710b_A2050 3.2e-22 nitroreductase family protein; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00235
symbol: EHM55986.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0666 7.1e-25 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 9.26; Belongs to the UPF0758 family.


ensembl_gene_id: HMPREF9080_00236
symbol: EHM55987.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: HMPREF9080_00237
symbol: EHM55988.1
gene_biotype: protein_coding
description:
  KEGG: acp:A2cp1_2756 1.0e-80 spermine synthase; K00797 spermidine synthase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00240
symbol: EHM55939.1
gene_biotype: protein_coding
description:
  ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ppg:PputGB1_0361 2.0e-68 sensory histidine kinase CreC; K07641 two-component system, OmpR family, sensor histidine kinase CreC; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00242
symbol: EHM55941.1
gene_biotype: protein_coding
description:
  Anticodon-binding domain protein; KEGG: dno:DNO_0083 2.0e-152 ileS; isoleucyl-tRNA synthetase K01870; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00244
symbol: EHM55943.1
gene_biotype: protein_coding
description:
  Riboflavin kinase / FAD synthetase; KEGG: dno:DNO_0082 5.5e-18 ribF; riboflavin kinase RibF K11753; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00246
symbol: EHM55945.1
gene_biotype: protein_coding
description:
  TIGR01244 family protein; KEGG: bte:BTH_I2281 8.2e-16 pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: HMPREF9080_00248
symbol: EHM55947.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: chu:CHU_2614 0.0036 nuoM; NADH:ubiquinone oxidoreductase chain M; K00342 NADH dehydrogenase I subunit M; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00249
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: HMPREF9080_00251
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: HMPREF9080_00253
symbol: EHM55952.1
gene_biotype: protein_coding
description:
  Channel protein, MIP family; KEGG: ctu:Ctu_01690 2.8e-21 glpF; glycerol uptake facilitator protein K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: HMPREF9080_00258
symbol: EHM55957.1
gene_biotype: protein_coding
description:
  PAS domain S-box protein; KEGG: rcp:RCAP_rcc00643 4.1e-10 diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_00259
symbol: EHM55958.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMPREF9080_00260
symbol: EHM55959.1
gene_biotype: protein_coding
description:
  Auxiliary transport protein, membrane fusion protein family protein; KEGG: apb:SAR116_2008 3.2e-11 secretion protein HlyD; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00269
symbol: EHM55924.1
gene_biotype: protein_coding
description:
  Putative peptidoglycan amidase MepA; KEGG: gbe:GbCGDNIH1_1449 8.3e-38 mepA; penicillin-insensitive murein endopeptidase K07261; Psort location: Periplasmic, score: 9.44.


ensembl_gene_id: HMPREF9080_00274
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF9080_00275
symbol: EHM55930.1
gene_biotype: protein_coding
description:
  Signal peptidase I; KEGG: dno:DNO_0693 7.0e-89 lepB; signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family.


ensembl_gene_id: HMPREF9080_00276
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF9080_00277
symbol: era
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF9080_00286
symbol: EHM55904.1
gene_biotype: protein_coding
description:
  LysR substrate binding domain protein; KEGG: asu:Asuc_1311 5.6e-64 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF9080_00288
symbol: EHM55906.1
gene_biotype: protein_coding
description:
  Organophosphate reductase; KEGG: lmf:LMOf2365_2565 1.5e-93 morA; morphine 6-dehydrogenase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00290
symbol: EHM55908.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2000 2.0e-43 drug resistance transporter, Bcr/CflA subfamily K07552; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00295
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF9080_00296
symbol: EHM55914.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rcm:A1E_05665 4.3e-06 coproporphyrinogen III oxidase K08973; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00300
symbol: EHM55918.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0688 0. dnaE; DNA polymerase III, alpha subunit K02337; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00306
symbol: EHM55874.1
gene_biotype: protein_coding
description:
  Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: fbl:Fbal_3635 3.4e-09 histidine kinase; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_00307
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: HMPREF9080_00308
symbol: EHM55876.1
gene_biotype: protein_coding
description:
  KEGG: hse:Hsero_4728 6.5e-86 phosphate/phosphonate ABC transporter permease K02042; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00309
symbol: EHM55877.1
gene_biotype: protein_coding
description:
  KEGG: hse:Hsero_4727 2.1e-87 phosphate/phosphonate ABC transporter permease K02042; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00312
symbol: EHM55880.1
gene_biotype: protein_coding
description:
  Permease, YjgP/YjgQ family; KEGG: hip:CGSHiEE_03515 1.1e-17 leucyl aminopeptidase K11720; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00313
symbol: EHM55881.1
gene_biotype: protein_coding
description:
  Permease, YjgP/YjgQ family; KEGG: hiq:CGSHiGG_02270 1.2e-22 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00315
symbol: EHM55883.1
gene_biotype: protein_coding
description:
  Putative leucyl aminopeptidase; KEGG: dno:DNO_1151 2.1e-103 leucine aminopeptidase K01255; Psort location: Cytoplasmic, score: 9.97; Belongs to the peptidase M17 family.


ensembl_gene_id: HMPREF9080_00316
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: HMPREF9080_00317
symbol: EHM55885.1
gene_biotype: protein_coding
description:
  CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: pha:PSHAa3017 2.6e-59 parA; partitioning protein A K03496; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_00318
symbol: EHM55886.1
gene_biotype: protein_coding
description:
  ParB-like protein; KEGG: cti:RALTA_A3100 1.5e-56 parB1; exonuclease involved in chromosome partitioning, ParB protein K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.


ensembl_gene_id: HMPREF9080_00320
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: HMPREF9080_00321
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9080_00322
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: HMPREF9080_00323
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9080_00324
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: HMPREF9080_00325
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: HMPREF9080_00327
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: HMPREF9080_00328
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMPREF9080_00329
symbol: EHM55897.1
gene_biotype: protein_coding
description:
  KEGG: gga:423733 0.0015 DUPD1; dual specificity phosphatase and pro isomerase domain containing 1; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_00331
symbol: EHM55899.1
gene_biotype: protein_coding
description:
  KEGG: hse:Hsero_0986 5.0e-10 fbpC; TonB-dependent siderophore receptor protein K02014; Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00335
symbol: EHM55870.1
gene_biotype: protein_coding
description:
  Peptidase, C39 family; KEGG: ddd:Dda3937_02098 3.3e-05 hecA2; putative member of ShlA/HecA/FhaA exoprotein family; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_00336
symbol: EHM55871.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: eci:UTI89_C4946 2.2e-16 ShlA/HecA/FhaA exofamily protein; Psort location: OuterMembrane, score: 9.92.


ensembl_gene_id: HMPREF9080_00338
symbol: EHM55829.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tbd:Tbd_2668 3.8e-25 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00339
symbol: EHM55830.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0998 1.2e-77 lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00340
symbol: EHM55831.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: HMPREF9080_00341
symbol: EHM55832.1
gene_biotype: protein_coding
description:
  Signal peptide peptidase SppA; KEGG: dno:DNO_0999 3.6e-76 SspA family peptidase; K04773 protease IV; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00342
symbol: EHM55833.1
gene_biotype: protein_coding
description:
  Putative rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF9080_00343
symbol: EHM55834.1
gene_biotype: protein_coding
description:
  Cytochrome; KEGG: ngk:NGK_1607 7.3e-09 CcoP; K00406 cb-type cytochrome c oxidase subunit III; Psort location: Periplasmic, score: 9.83.


ensembl_gene_id: HMPREF9080_00346
symbol: EHM55837.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: HMPREF9080_00348
symbol: fbpC
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF9080_00349
symbol: EHM55840.1
gene_biotype: protein_coding
description:
  ABC transporter, permease protein; KEGG: sis:LS215_2763 1.6e-16 binding-protein-dependent transport systems inner membrane component K02025:K02026; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00350
symbol: EHM55841.1
gene_biotype: protein_coding
description:
  ABC transporter, solute-binding protein; KEGG: hiq:CGSHiGG_03235 1.9e-118 fbpC; ferric transporter ATP-binding subunit K02012; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_00351
symbol: EHM55842.1
gene_biotype: protein_coding
description:
  ABC transporter, solute-binding protein; KEGG: hiq:CGSHiGG_03235 4.1e-139 fbpC; ferric transporter ATP-binding subunit K02012; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_00352
symbol: EHM55843.1
gene_biotype: protein_coding
description:
  Oxidoreductase, NAD-binding domain protein; KEGG: pva:Pvag_1255 8.6e-68 ydgJ; uncharacterized oxidoreductase C26H5.09c; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00353
symbol: EHM55844.1
gene_biotype: protein_coding
description:
  KEGG: vsp:VS_II1287 1.8e-113 glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase.


ensembl_gene_id: HMPREF9080_00355
symbol: EHM55846.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecQ family; KEGG: plu:plu4452 4.1e-235 hypothetical protein; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00357
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF9080_00361
symbol: EHM55852.1
gene_biotype: protein_coding
description:
  Peptidase, M48 family; KEGG: pmu:PM1190 7.8e-58 hypothetical protein; K07387 putative metalloprotease.


ensembl_gene_id: HMPREF9080_00363
symbol: EHM55854.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tbd:Tbd_2668 3.5e-24 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00365
symbol: mtlD
gene_biotype: protein_coding
description:
  KEGG: kpe:KPK_0152 1.9e-111 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00366
symbol: EHM55857.1
gene_biotype: protein_coding
description:
  EIICBA-Mtl; KEGG: asu:Asuc_0455 1.7e-222 PTS system, mannitol-specific IIC subunit; K02798 PTS system, mannitol-specific IIA component; K02799 PTS system, mannitol-specific IIB component K02800; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00368
symbol: EHM55859.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 1.7e-14 zntR; zinc-responsive transcriptional regulator K13638; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00369
symbol: EHM55860.1
gene_biotype: protein_coding
description:
  Cadmium, cobalt and zinc/H(+)-K(+) antiporter domain protein; KEGG: hiq:CGSHiGG_06380 1.1e-35 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K03295; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00375
symbol: EHM55866.1
gene_biotype: protein_coding
description:
  SIS domain protein; KEGG: dno:DNO_0528 3.3e-91 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00376
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: HMPREF9080_00377
symbol: pheT
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1056 1.7e-222 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00378
symbol: pheS
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1055 2.3e-115 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889; Psort location: Cytoplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_00379
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF9080_00380
symbol: rpmI
gene_biotype: protein_coding
description:
  Ribosomal protein L35; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: HMPREF9080_00381
symbol: EHM55804.1
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; KEGG: fth:FTH_1368 7.0e-34 infC; protein-synthesizing GTPase K02520; Psort location: Cytoplasmic, score: 9.97; Belongs to the IF-3 family.


ensembl_gene_id: HMPREF9080_00382
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: HMPREF9080_00383
symbol: EHM55806.1
gene_biotype: protein_coding
description:
  SIS domain protein; KEGG: hel:HELO_3101 1.9e-86 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing); Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00385
symbol: EHM55808.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; KEGG: hip:CGSHiEE_02055 1.9e-24 fucI; L-fucose isomerase K02430; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00386
symbol: EHM55809.1
gene_biotype: protein_coding
description:
  Tagatose-6-phosphate kinase; KEGG: enc:ECL_04519 1.6e-114 tagatose 6-phosphate kinase; K00917 tagatose 6-phosphate kinase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00388
symbol: EHM55811.1
gene_biotype: protein_coding
description:
  SIS domain protein; KEGG: bcj:BCAS0465 1.4e-60 putative tagatose-6-phosphate ketose/aldose isomerase; K02082 tagatose-6-phosphate ketose/aldose isomerase.


ensembl_gene_id: HMPREF9080_00391
symbol: EHM55814.1
gene_biotype: protein_coding
description:
  KEGG: spe:Spro_3847 3.2e-52 PTS system mannose/fructose/sorbose family transporter subunit IIB K02745; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00392
symbol: EHM55815.1
gene_biotype: protein_coding
description:
  KEGG: vfi:VF_A1002 3.0e-49 agaC; PTS system, N-acetylgalactosamine-specific IIC component K02746; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00393
symbol: EHM55816.1
gene_biotype: protein_coding
description:
  KEGG: vfi:VF_A1001 5.3e-52 agaD; N-acetylgalactosamine-specific enzyme IID component of PTS K02747; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00396
symbol: EHM55819.1
gene_biotype: protein_coding
description:
  PTS system fructose IIA component; KEGG: seu:SEQ_1485 6.1e-19 N-acetylgalactosamine-specific phosphotransferase system (PTS), IIA component; K02744 PTS system, N-acetylgalactosamine-specific IIA component; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00397
symbol: EHM55820.1
gene_biotype: protein_coding
description:
  KEGG: aha:AHA_3039 3.2e-13 ptsH; phosphocarrier protein PtsH K02784; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00398
symbol: EHM55821.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: HMPREF9080_00400
symbol: EHM55823.1
gene_biotype: protein_coding
description:
  Serine transporter; KEGG: hiq:CGSHiGG_05890 0.00017 pgk; phosphoglycerate kinase K03834; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00401
symbol: EHM55824.1
gene_biotype: protein_coding
description:
  KEGG: hdu:HD1142 5.3e-178 sdaA; L-serine dehydratase; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: HMPREF9080_00403
symbol: EHM55826.1
gene_biotype: protein_coding
description:
  Bacterial stress protein; KEGG: gbr:Gbro_4769 6.8e-15 exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00404
symbol: EHM55827.1
gene_biotype: protein_coding
description:
  Integral membrane protein, TerC family; KEGG: ddd:Dda3937_02743 1.1e-35 ygjT; Alx protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00408
symbol: EHM55746.1
gene_biotype: protein_coding
description:
  Tex-like protein; KEGG: bur:Bcep18194_A5099 3.9e-237 RNA binding S1 K06959; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00412
symbol: EHM55750.1
gene_biotype: protein_coding
description:
  Putative biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.


ensembl_gene_id: HMPREF9080_00413
symbol: EHM55751.1
gene_biotype: protein_coding
description:
  CBS domain protein; KEGG: ctu:Ctu_12820 8.1e-56 corC; magnesium and cobalt efflux protein CorC K06189; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_00415
symbol: EHM55753.1
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: HMPREF9080_00416
symbol: EHM55754.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: HMPREF9080_00420
symbol: EHM55758.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: xce:Xcel_2030 3.4e-05 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658.


ensembl_gene_id: HMPREF9080_00421
symbol: EHM55759.1
gene_biotype: protein_coding
description:
  MBOAT family protein; KEGG: ddd:Dda3937_01046 1.6e-80 putative poly(beta-D-mannuronate) O-acetylase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: HMPREF9080_00423
symbol: EHM55761.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.16; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00426
symbol: EHM55764.1
gene_biotype: protein_coding
description:
  Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bgl:bglu_1g28200 2.1e-16 ABC-type cobalamin/Fe3 -siderophores transport systems ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF9080_00427
symbol: EHM55765.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; KEGG: asu:Asuc_0905 1.1e-76 ABC transporter related; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.


ensembl_gene_id: HMPREF9080_00428
symbol: EHM55766.1
gene_biotype: protein_coding
description:
  Pseudoazurin; KEGG: apb:SAR116_2432 3.1e-15 pseudoazurin; Psort location: Periplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_00429
symbol: EHM55767.1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: HMPREF9080_00431
symbol: EHM55769.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1110 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00433
symbol: EHM55771.1
gene_biotype: protein_coding
description:
  Leucine Rich repeat-containing domain protein; KEGG: cyj:Cyan7822_0792 3.6e-55 small GTP-binding protein; Psort location: Extracellular, score: 9.71.


ensembl_gene_id: HMPREF9080_00434
symbol: EHM55772.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mma:MM_2623 2.5e-05 exosome complex exonuclease 1 K11600; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00437
symbol: EHM55775.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ecb:100058499 0.0028 similar to Tankyrase-1 (TANK1) (Tankyrase I) (TNKS-1) (TRF1-interacting ankyrin-related ADP-ribose polymerase); K10799 tankyrase; Psort location: Periplasmic, score: 9.84.


ensembl_gene_id: HMPREF9080_00438
symbol: EHM55776.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; KEGG: dno:DNO_1200 5.6e-167 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00439
symbol: EHM55777.1
gene_biotype: protein_coding
description:
  KEGG: cja:CJA_0289 1.2e-29 5-formyltetrahydrofolate cyclo-ligase family protein K01934; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: HMPREF9080_00440
symbol: EHM55778.1
gene_biotype: protein_coding
description:
  Putative HTH-type transcriptional regulator CysB; KEGG: mct:MCR_0286 8.2e-11 LysR family transcriptional regulator K04761; Psort location: Cytoplasmic, score: 9.26; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF9080_00441
symbol: EHM55779.1
gene_biotype: protein_coding
description:
  Cysteine synthase A; KEGG: kko:Kkor_1615 1.9e-127 cysteine synthase A; K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 9.26; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: HMPREF9080_00443
symbol: EHM55781.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pmg:P9301_18161 0.00070 dedA; DedA family alkaline phosphatase-like protein K01077; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00450
symbol: EHM55788.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: avn:Avin_05020 3.2e-07 gshA; glutamate--cysteine ligase; K01919 glutamate--cysteine ligase.


ensembl_gene_id: HMPREF9080_00453
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthase; KEGG: dno:DNO_1218 1.5e-116 gshB; glutathione synthetase; K01920 glutathione synthase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00455
symbol: secB
gene_biotype: protein_coding
description:
  Protein-export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: HMPREF9080_00456
symbol: gpsA
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate dehydrogenase [NAD(P)+ ]; KEGG: dno:DNO_0293 3.3e-107 glycerol-3-phosphate dehydrogenase K00057; Psort location: Cytoplasmic, score: 9.26; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9080_00457
symbol: EHM55795.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase A; KEGG: dno:DNO_0294 9.8e-51 rluA; ribosomal large subunit pseudouridine synthase, RluA K06177; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00461
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: HMPREF9080_00464
symbol: EHM55718.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase, bacterial; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: HMPREF9080_00466
symbol: EHM55720.1
gene_biotype: protein_coding
description:
  KEGG: vfi:VF_1798 1.8e-09 clcA; chloride channel protein K03281; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00467
symbol: EHM55721.1
gene_biotype: protein_coding
description:
  Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.5e-15 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00469
symbol: EHM55723.1
gene_biotype: protein_coding
description:
  KEGG: cch:Cag_1938 1.6e-75 Sel1 repeat-containing protein K07126; Psort location: Extracellular, score: 9.71.


ensembl_gene_id: HMPREF9080_00471
symbol: EHM55725.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aha:AHA_2807 2.8e-21 homocysteine S-methyltransferase K00547; Psort location: Periplasmic, score: 9.83.


ensembl_gene_id: HMPREF9080_00473
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMPREF9080_00474
symbol: EHM55728.1
gene_biotype: protein_coding
description:
  Putative phage shock operon rhodanese PspE; KEGG: ecf:ECH74115_1950 4.9e-17 pspE; thiosulfate:cyanide sulfurtransferase K03972.


ensembl_gene_id: HMPREF9080_00475
symbol: nrdR
gene_biotype: protein_coding
description:
  Putative transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: HMPREF9080_00476
symbol: EHM55730.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: HMPREF9080_00477
symbol: EHM55731.1
gene_biotype: protein_coding
description:
  KEGG: aeh:Mlg_0376 7.4e-62 riboflavin synthase subunit alpha K00793; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00478
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: HMPREF9080_00479
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: HMPREF9080_00480
symbol: EHM55734.1
gene_biotype: protein_coding
description:
  Toxin-antitoxin system, toxin component, Fic family; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.


ensembl_gene_id: HMPREF9080_00482
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF9080_00484
symbol: EHM55738.1
gene_biotype: protein_coding
description:
  Lipoprotein, SmpA/OmlA family; KEGG: reh:H16_A2372 4.8e-58 3'-5' exonuclease K07501; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00486
symbol: EHM55740.1
gene_biotype: protein_coding
description:
  Bacterial stress protein; KEGG: gbr:Gbro_4769 1.8e-10 exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00492
symbol: EHM55681.1
gene_biotype: protein_coding
description:
  Peroxiredoxin, Ohr subfamily; KEGG: cti:RALTA_B0167 6.1e-35 ohrB; organic hydroperoxide resistance protein OhrB, OsmC family; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00494
symbol: EHM55683.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cco:CCC13826_0483 3.4e-08 phenylalanyl-tRNA synthetase alpha chain (phenylalanine--tRNA ligase alpha chain; PheRS).


ensembl_gene_id: HMPREF9080_00495
symbol: EHM55684.1
gene_biotype: protein_coding
description:
  Mannose permease IID component; KEGG: ddd:Dda3937_04593 9.1e-96 manZ, gptB, mpt, ptsM, ptsX; PTS system mannose-specific transporter subunit IIC K02796; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00496
symbol: EHM55685.1
gene_biotype: protein_coding
description:
  Mannose permease IIC component; KEGG: ddd:Dda3937_03726 4.4e-96 manY, pel, ptsM, ptsP; PTS system mannose-specific transporter subunit IIC K02795; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00497
symbol: EHM55686.1
gene_biotype: protein_coding
description:
  KEGG: ebd:ECBD_1824 1.0e-94 PTS system, mannose/fructose/sorbose family, IIA subunit; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00498
symbol: EHM55687.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMPREF9080_00499
symbol: dnaA
gene_biotype: protein_coding
description:
  Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF9080_00500
symbol: EHM55689.1
gene_biotype: protein_coding
description:
  Low molecular weight phosphotyrosine protein phosphatase; KEGG: coc:Coch_2170 5.4e-27 protein tyrosine phosphatase K01104; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: HMPREF9080_00501
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: HMPREF9080_00505
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF9080_00508
symbol: EHM55697.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; KEGG: reh:H16_A0376 1.9e-29 O-linked N-acetylglucosamine transferase OGT; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00511
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: HMPREF9080_00512
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: HMPREF9080_00513
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF9080_00514
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF9080_00515
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: HMPREF9080_00520
symbol: bamE
gene_biotype: protein_coding
description:
  SmpA / OmlA family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HMPREF9080_00521
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMPREF9080_00523
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF9080_00524
symbol: znuC
gene_biotype: protein_coding
description:
  Putative high-affinity zinc transporter ATPase; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: HMPREF9080_00528
symbol: EHM55675.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; KEGG: mct:MCR_0360 2.1e-119 type III restriction-modification system restriction endonuclease K07316; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00529
symbol: EHM55676.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apj:APJL_0819 4.8e-16 adenine specific DNA methylase Mod; K07316 adenine-specific DNA-methyltransferase.


ensembl_gene_id: HMPREF9080_00532
symbol: EHM55636.1
gene_biotype: protein_coding
description:
  Ribosomal protein L17; KEGG: apb:SAR116_2416 3.9e-24 ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial ribosomal protein bL17 family.


ensembl_gene_id: HMPREF9080_00533
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9080_00534
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF9080_00535
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF9080_00536
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF9080_00537
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF9080_00538
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF9080_00539
symbol: rpmD
gene_biotype: protein_coding
description:
  Ribosomal protein L30; KEGG: apb:SAR116_2409 1.9e-06 ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00540
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF9080_00541
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF9080_00542
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF9080_00543
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF9080_00544
symbol: rpsN
gene_biotype: protein_coding
description:
  Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: HMPREF9080_00545
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF9080_00546
symbol: EHM55650.1
gene_biotype: protein_coding
description:
  Ribosomal protein L24; KEGG: apb:SAR116_2402 8.1e-08 ribosomal protein L24 K02895; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00547
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF9080_00549
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF9080_00550
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF9080_00551
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF9080_00552
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF9080_00553
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF9080_00555
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: HMPREF9080_00556
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF9080_00557
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF9080_00558
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: HMPREF9080_00559
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF9080_00560
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF9080_00561
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9080_00562
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9080_00564
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF9080_00565
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF9080_00566
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF9080_00567
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF9080_00568
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF9080_00569
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: HMPREF9080_00572
symbol: EHM55624.1
gene_biotype: protein_coding
description:
  TIGR00730 family protein; KEGG: ccs:CCNA_00853 1.3e-30 3-isopropylmalate dehydrogenase K06966; Psort location: Cytoplasmic, score: 9.26; Belongs to the LOG family.


ensembl_gene_id: HMPREF9080_00573
symbol: polA
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: HMPREF9080_00575
symbol: EHM55627.1
gene_biotype: protein_coding
description:
  KEGG: eic:NT01EI_2825 1.7e-135 excinuclease ABC subunit B K03702; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00576
symbol: EHM55628.1
gene_biotype: protein_coding
description:
  Helicase protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the Uv [...]


ensembl_gene_id: HMPREF9080_00577
symbol: EHM55629.1
gene_biotype: protein_coding
description:
  Dam-replacing family protein; KEGG: nme:NMB1896 2.1e-57 dpnC; type II restriction enzyme DpnI K01155.


ensembl_gene_id: HMPREF9080_00578
symbol: EHM55630.1
gene_biotype: protein_coding
description:
  NnrS protein; KEGG: bme:BMEII0964 1.9e-16 asparagine synthetase B (glutamine-hydrolyzing) K07234; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00579
symbol: EHM55631.1
gene_biotype: protein_coding
description:
  PAP2 family protein; KEGG: nph:NP2984A 0.0046 homolog 2 to phosphatidylglycerophosphatase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00581
symbol: EHM55633.1
gene_biotype: protein_coding
description:
  Toxin-antitoxin system, antitoxin component, PHD domain protein; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00588
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF9080_00589
symbol: EHM55612.1
gene_biotype: protein_coding
description:
  Putative type IV prepilin leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: HMPREF9080_00590
symbol: EHM55613.1
gene_biotype: protein_coding
description:
  Putative type IV fimbrial assembly protein PilC; KEGG: apb:SAR116_2517 3.0e-56 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00591
symbol: EHM55614.1
gene_biotype: protein_coding
description:
  Type IV-A pilus assembly ATPase PilB; KEGG: apb:SAR116_2518 9.2e-87 type II secretion system PilB K02652; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00592
symbol: EHM55615.1
gene_biotype: protein_coding
description:
  KEGG: azo:azo3324 3.4e-57 trpG; anthranilate synthase component II K01658; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00594
symbol: argG
gene_biotype: protein_coding
description:
  KEGG: nmc:NMC2106 1.6e-199 argG; argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 9.97; Belongs to the argininosuccinate synthase family. Type 2 subfamily.


ensembl_gene_id: HMPREF9080_00603
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: HMPREF9080_00604
symbol: serC
gene_biotype: protein_coding
description:
  Putative phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: HMPREF9080_00609
symbol: EHM55600.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ccv:CCV52592_1824 6.6e-14 phosphoglycerate kinase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00610
symbol: EHM55601.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1196 2.1e-103 iscS; cysteine desulfurase K04487; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00611
symbol: EHM55602.1
gene_biotype: protein_coding
description:
  KEGG: slt:Slit_2257 4.2e-59 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00613
symbol: EHM55604.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0397 8.2e-63 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00614
symbol: EHM55605.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0164 1.3e-222 uvrD-1; DNA helicase II K03657; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00619
symbol: EHM55609.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, MerR family; KEGG: syn:sll0794 8.3e-08 merR; mercuric resistance operon regulatory protein precorrin isomerase; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00622
symbol: EHM55582.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rcp:RCAP_rcc02063 1.7e-05 M10 family peptidase; Psort location: CytoplasmicMembrane, score: 9.83.


ensembl_gene_id: HMPREF9080_00623
symbol: EHM55583.1
gene_biotype: protein_coding
description:
  KEGG: mct:MCR_0926 5.4e-98 putative lytic murein transglycosylase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00625
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: HMPREF9080_00627
symbol: EHM55576.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_1296 0.0022 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527.


ensembl_gene_id: HMPREF9080_00629
symbol: EHM55578.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: srt:Srot_2020 0.0013 aldehyde dehydrogenase; K00130 betaine-aldehyde dehydrogenase.


ensembl_gene_id: HMPREF9080_00631
symbol: EHM55580.1
gene_biotype: protein_coding
description:
  Putative bis(5'-nucleosyl)-tetraphosphatase; KEGG: dno:DNO_1294 5.5e-57 apaH; diadenosine tetraphosphatase K01525; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00636
symbol: EHM55547.1
gene_biotype: protein_coding
description:
  SCP-like protein; KEGG: hau:Haur_4796 0.00023 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial.


ensembl_gene_id: HMPREF9080_00638
symbol: EHM55549.1
gene_biotype: protein_coding
description:
  Peptidase, M48 family; KEGG: pcu:pc0901 4.2e-15 hypothetical protein; K03799 heat shock protein HtpX.


ensembl_gene_id: HMPREF9080_00642
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: HMPREF9080_00643
symbol: EHM55554.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: kpe:KPK_2724 6.6e-22 oxidoreductase, 2-nitropropane dioxygenase family; K00459 nitronate monooxygenase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00647
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: HMPREF9080_00648
symbol: EHM55559.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein DsbC family protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: HMPREF9080_00650
symbol: EHM55561.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_1837 1.5e-29 phage integrase family protein K03733; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00651
symbol: EHM55562.1
gene_biotype: protein_coding
description:
  Phage integrase, SAM-like domain protein; KEGG: apb:SAR116_1915 2.6e-10 tyrosine recombinase XerD K04763.


ensembl_gene_id: HMPREF9080_00654
symbol: EHM55565.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gsu:GSU0997 5.2e-13 mutM; formamidopyrimidine-DNA glycosylase K10563; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00655
symbol: EHM55566.1
gene_biotype: protein_coding
description:
  Putative DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: HMPREF9080_00657
symbol: EHM55568.1
gene_biotype: protein_coding
description:
  NlpC/P60 family protein; KEGG: apb:SAR116_2146 4.2e-27 cell wall-associated hydrolase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00658
symbol: EHM55569.1
gene_biotype: protein_coding
description:
  Putative alkylphosphonate utilization operon protein PhnA; KEGG: ctu:Ctu_37290 6.2e-33 phnA; protein PhnA K06193.


ensembl_gene_id: HMPREF9080_00659
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase; KEGG: aap:NT05HA_1408 1.0e-142 fructose-1,6-bisphosphatase; K03841 fructose-1,6-bisphosphatase I; Belongs to the FBPase class 1 family.


ensembl_gene_id: HMPREF9080_00660
symbol: EHM55571.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMPREF9080_00661
symbol: EHM55572.1
gene_biotype: protein_coding
description:
  Pyridoxal kinase; KEGG: rme:Rmet_4114 1.1e-65 pdxK; pyridoxal kinase K00868; Psort location: Cytoplasmic, score: 9.26; Belongs to the pyridoxine kinase family.


ensembl_gene_id: HMPREF9080_00666
symbol: EHM55498.1
gene_biotype: protein_coding
description:
  Periplasmic copper-binding protein; KEGG: bpt:Bpet4340 8.9e-105 nosD; copper ABC transporter, periplasmic copper-binding protein K07218; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_00668
symbol: EHM55500.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0610 3.6e-211 PTS system, fructose IIC subunit; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00669
symbol: EHM55501.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF9080_00670
symbol: EHM55502.1
gene_biotype: protein_coding
description:
  Acyltransferase; KEGG: dno:DNO_1058 8.8e-66 acyltransferase domain-containing protein; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00672
symbol: EHM55504.1
gene_biotype: protein_coding
description:
  D,D-heptose 1,7-bisphosphate phosphatase domain protein; KEGG: alv:Alvin_3004 4.4e-09 histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.


ensembl_gene_id: HMPREF9080_00674
symbol: obg
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF9080_00675
symbol: rpmA
gene_biotype: protein_coding
description:
  Ribosomal protein L27; KEGG: apb:SAR116_1855 3.1e-24 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: HMPREF9080_00677
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF9080_00680
symbol: EHM55511.1
gene_biotype: protein_coding
description:
  Putative dGTPase; KEGG: dno:DNO_0254 2.0e-139 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00681
symbol: EHM55512.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ldb:Ldb0884 0.0044 prmA; ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00686
symbol: EHM55517.1
gene_biotype: protein_coding
description:
  MosA domain protein; KEGG: alv:Alvin_2411 1.2e-38 dihydrodipicolinate synthase K01714; Psort location: Cytoplasmic, score: 9.97; Belongs to the DapA family.


ensembl_gene_id: HMPREF9080_00687
symbol: EHM55518.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthetase family protein; KEGG: dno:DNO_1114 1.9e-40 dapA; dihydrodipicolinate synthase K01714; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00688
symbol: EHM55519.1
gene_biotype: protein_coding
description:
  Antioxidant, AhpC/TSA family; KEGG: dno:DNO_0557 7.6e-44 alkyl hydroperoxide reductase/thiol specific antioxidant family protein; K03564 peroxiredoxin Q/BCP; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00689
symbol: EHM55520.1
gene_biotype: protein_coding
description:
  KEGG: aeh:Mlg_1935 3.7e-19 glutathione S-transferase-like protein; K00799 glutathione S-transferase.


ensembl_gene_id: HMPREF9080_00692
symbol: EHM55523.1
gene_biotype: protein_coding
description:
  KEGG: bbe:BBR47_03220 3.2e-10 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00694
symbol: EHM55525.1
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF9080_00695
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HMPREF9080_00699
symbol: EHM55530.1
gene_biotype: protein_coding
description:
  KEGG: tgo:TGME49_092060 0.0024 protein kinase, putative; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00700
symbol: EHM55531.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00701
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: HMPREF9080_00704
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: HMPREF9080_00706
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: HMPREF9080_00707
symbol: EHM55538.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1134 1.9e-72 TruD family pseudouridine synthase K06176; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00710
symbol: EHM55541.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_00713
symbol: fhs
gene_biotype: protein_coding
description:
  KEGG: nmn:NMCC_0383 4.1e-210 fhs; formate--tetrahydrofolate ligase; K01938 formate--tetrahydrofolate ligase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00715
symbol: EHM55482.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ttu:TERTU_3672 5.1e-16 peptidase, M48 family; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00721
symbol: EHM55488.1
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF9080_00725
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF9080_00730
symbol: EHM55449.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: HMPREF9080_00732
symbol: EHM55451.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sco:SCO3542 0.00030 SCH5.05c; integral membrane protein with kinase activity; K00943 dTMP kinase.


ensembl_gene_id: HMPREF9080_00733
symbol: EHM55452.1
gene_biotype: protein_coding
description:
  Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: HMPREF9080_00740
symbol: EHM55434.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dvu:DVU1515 5.7e-24 type II DNA modification methyltransferase, putative; K00558 DNA (cytosine-5-)-methyltransferase.


ensembl_gene_id: HMPREF9080_00743
symbol: EHM55437.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cpc:Cpar_0384 0.0021 ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00745
symbol: EHM55439.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aag:AaeL_AAEL000109 3.5e-06 enolase-phosphatase e-1; K09880 enolase-phosphatase E1; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00747
symbol: EHM55441.1
gene_biotype: protein_coding
description:
  P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.


ensembl_gene_id: HMPREF9080_00757
symbol: EHM55401.1
gene_biotype: protein_coding
description:
  Type IV secretion/conjugal transfer ATPase, VirB4 family; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_00768
symbol: EHM55412.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mpo:Mpop_4958 0.0097 FolC bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase.


ensembl_gene_id: HMPREF9080_00772
symbol: EHM55360.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen dehydrogenase; KEGG: dno:DNO_0087 8.0e-104 hemN-1; oxygen-independent coproporphyrinogen III oxidase K02495; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00773
symbol: EHM55361.1
gene_biotype: protein_coding
description:
  Site-specific recombinase, phage integrase family; KEGG: lhk:LHK_02491 3.3e-06 probable aspartate transaminase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.


ensembl_gene_id: HMPREF9080_00776
symbol: EHM55364.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ddd:Dda3937_02198 9.3e-64 DNA primase TraC; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00782
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF9080_00784
symbol: EHM55276.1
gene_biotype: protein_coding
description:
  SCO1/SenC; KEGG: apb:SAR116_1001 3.1e-24 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152.


ensembl_gene_id: HMPREF9080_00787
symbol: EHM55279.1
gene_biotype: protein_coding
description:
  Putative N-carbamyl-L-cysteine amidohydrolase; KEGG: kpn:KPN_00965 3.5e-142 allantoate amidohydrolase; K06016 N-carbamoyl-L-amino-acid hydrolase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00789
symbol: EHM55281.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2220 5.6e-09 transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00791
symbol: EHM55283.1
gene_biotype: protein_coding
description:
  KEGG: sek:SSPA1669 1.6e-139 diaminopropionate ammonia-lyase; K01751 diaminopropionate ammonia-lyase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00793
symbol: EHM55285.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter family protein; KEGG: hpa:HPAG1_0925 3.3e-50 D-alanine glycine permease K03310; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00794
symbol: EHM55286.1
gene_biotype: protein_coding
description:
  Formyl transferase; KEGG: azl:AZL_a06020 1.1e-35 fmt; methionyl-tRNA formyltransferase K00604; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00795
symbol: EHM55287.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bmu:Bmul_0840 1.1e-06 ABC transporter related; K02013 iron complex transport system ATP-binding protein.


ensembl_gene_id: HMPREF9080_00801
symbol: EHM55293.1
gene_biotype: protein_coding
description:
  Baseplate J-like protein; KEGG: tpr:Tpau_2648 0.0064 UDP-N-acetylmuramoylalanine/D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase.


ensembl_gene_id: HMPREF9080_00805
symbol: EHM55297.1
gene_biotype: protein_coding
description:
  DNA circulation protein; KEGG: reh:H16_B0196 0.00012 sbcC; DNA repair exonuclease, SbcC K03546; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00806
symbol: EHM55298.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rcp:RCAP_rcc02134 0.00020 sbcC; exonuclease SbcCD subunit C K03546; Psort location: CytoplasmicMembrane, score: 9.46.


ensembl_gene_id: HMPREF9080_00833
symbol: EHM55325.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; KEGG: apb:SAR116_2145 7.5e-21 negative regulator of beta-lactamase expression; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00846
symbol: EHM55338.1
gene_biotype: protein_coding
description:
  Integrase core domain protein; KEGG: nwi:Nwi_0782 0.00072 integrase, catalytic region K00986; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00848
symbol: EHM55340.1
gene_biotype: protein_coding
description:
  DNA-binding helix-turn-helix protein; KEGG: rcp:RCAP_rcc01011 1.4e-17 S24 family peptidase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00850
symbol: EHM55342.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pmj:P9211_06131 0.00016 Na+/alanine symporter K03310; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00852
symbol: EHM55344.1
gene_biotype: protein_coding
description:
  KEGG: psp:PSPPH_4690 2.6e-75 formate transporter; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00855
symbol: EHM55347.1
gene_biotype: protein_coding
description:
  PEP-utilizing enzyme, mobile domain protein; KEGG: dhd:Dhaf_1622 4.6e-26 pyruvate phosphate dikinase PEP/pyruvate-binding; K01007 pyruvate, water dikinase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00857
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: HMPREF9080_00859
symbol: EHM55253.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mmr:Mmar10_2493 2.5e-20 serralysin K01406; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_00860
symbol: EHM55254.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pag:PLES_37961 1.1e-06 dnaX; DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau.


ensembl_gene_id: HMPREF9080_00862
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: HMPREF9080_00863
symbol: EHM55216.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF9080_00864
symbol: EHM55217.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF9080_00865
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HMPREF9080_00866
symbol: EHM55219.1
gene_biotype: protein_coding
description:
  Putative tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF9080_00867
symbol: EHM55220.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, Fis family; KEGG: seh:SeHA_C3683 8.4e-06 fis; DNA-binding protein fis K03557; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: HMPREF9080_00870
symbol: EHM55223.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: fal:FRAAL6657 0.0057 N-acetylmuramoyl-L-alanine amidase (autolysin) K01447; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_00874
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: HMPREF9080_00875
symbol: EHM55228.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0073 6.7e-116 dipeptidase family protein K01273; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00877
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMPREF9080_00879
symbol: EHM55232.1
gene_biotype: protein_coding
description:
  Putative HflC protein; KEGG: dno:DNO_0598 3.1e-54 hflC; HflC protein; K04087 membrane protease subunit HflC; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00880
symbol: EHM55233.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0598 3.8e-17 hflC; HflC protein; K04087 membrane protease subunit HflC.


ensembl_gene_id: HMPREF9080_00883
symbol: EHM55236.1
gene_biotype: protein_coding
description:
  KEGG: eci:UTI89_C4773 6.0e-44 hflX; putative GTPase HflX K03665; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00884
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: HMPREF9080_00889
symbol: EHM55242.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rcu:RCOM_0040960 2.8e-06 HTH-type transcriptional regulator ptxR, putative.


ensembl_gene_id: HMPREF9080_00891
symbol: EHM55244.1
gene_biotype: protein_coding
description:
  KEGG: har:HEAR0451 5.1e-54 putative glutamyl-Q tRNA(Asp) synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00895
symbol: EHM55142.1
gene_biotype: protein_coding
description:
  Protein, SNF2 family; KEGG: hsl:OE7185F 2.9e-49 ATP-dependent helicase; Psort location: Cytoplasmic, score: 9.94.


ensembl_gene_id: HMPREF9080_00896
symbol: EHM55143.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: lsl:LSL_1759 8.9e-08 type III restriction-modification system restriction subunit K01156.


ensembl_gene_id: HMPREF9080_00897
symbol: EHM55144.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; KEGG: apa:APP7_0747 8.5e-187 putative methylation subunit, type III restriction-modification system; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00898
symbol: EHM55145.1
gene_biotype: protein_coding
description:
  Putative FeS assembly SUF system protein; KEGG: mpl:Mpal_1220 3.7e-08 serine O-acetyltransferase K00640.


ensembl_gene_id: HMPREF9080_00900
symbol: EHM55147.1
gene_biotype: protein_coding
description:
  SUF system FeS assembly protein, NifU family; KEGG: apb:SAR116_0470 3.4e-09 NifU-like protein involved in Fe-S cluster formation K04488.


ensembl_gene_id: HMPREF9080_00901
symbol: EHM55148.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: HMPREF9080_00902
symbol: EHM55149.1
gene_biotype: protein_coding
description:
  SufB/sufD domain protein; KEGG: apb:SAR116_0016 3.2e-36 SufD, needed for FhuF Fe-S center production/stability K09015; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00903
symbol: EHM55150.1
gene_biotype: protein_coding
description:
  KEGG: noc:Noc_2489 3.5e-87 FeS assembly ATPase SufC K09013; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00904
symbol: EHM55151.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0014 8.8e-185 FeS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00905
symbol: EHM55152.1
gene_biotype: protein_coding
description:
  FeS assembly SUF system regulator; KEGG: apb:SAR116_0013 6.5e-15 transcriptional regulator, BadM/Rrf2 family.


ensembl_gene_id: HMPREF9080_00906
symbol: EHM55153.1
gene_biotype: protein_coding
description:
  Transglutaminase-like protein; KEGG: bmd:BMD_0264 3.8e-12 protease transglutaminase superfamily; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00908
symbol: EHM55155.1
gene_biotype: protein_coding
description:
  ATPase family protein; KEGG: dno:DNO_0842 3.0e-97 MoxR family protein; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00909
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: HMPREF9080_00910
symbol: EHM55157.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase, bacterial; KEGG: aeh:Mlg_0909 3.0e-42 phosphoglycolate phosphatase K01091; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_00911
symbol: EHM55158.1
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: ccs:CCNA_01728 9.0e-25 short chain dehydrogenase.


ensembl_gene_id: HMPREF9080_00915
symbol: EHM55162.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0533 6.2e-81 ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.


ensembl_gene_id: HMPREF9080_00916
symbol: EHM55163.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF9080_00917
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: HMPREF9080_00919
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF9080_00920
symbol: EHM55116.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mba:Mbar_A0120 0.0075 cytochrome d ubiquinol oxidase, subunit II; K00426 cytochrome bd-I oxidase subunit II; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00922
symbol: EHM55118.1
gene_biotype: protein_coding
description:
  PPIC-type PPIASE domain protein; KEGG: dno:DNO_0921 3.0e-65 PpiC-type peptidylprolyl cis-trans isomerase K03771.


ensembl_gene_id: HMPREF9080_00923
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: HMPREF9080_00924
symbol: purH
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0918 8.7e-178 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase.


ensembl_gene_id: HMPREF9080_00925
symbol: EHM55121.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bpb:bpr_I1854 0.0042 shikimate 5-dehydrogenase/shikimate kinase; Psort location: Periplasmic, score: 9.84.


ensembl_gene_id: HMPREF9080_00926
symbol: EHM55122.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mgm:Mmc1_0537 2.3e-21 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798.


ensembl_gene_id: HMPREF9080_00928
symbol: EHM55124.1
gene_biotype: protein_coding
description:
  OmpA family protein; KEGG: sli:Slin_0746 4.5e-11 V-type H(+)-translocating pyrophosphatase K01507; Psort location: OuterMembrane, score: 9.92.


ensembl_gene_id: HMPREF9080_00930
symbol: EHM55126.1
gene_biotype: protein_coding
description:
  Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: HMPREF9080_00932
symbol: EHM55128.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bvi:Bcep1808_5810 0.0049 malto-oligosyltrehalose trehalohydrolase; K01236 maltooligosyltrehalose trehalohydrolase.


ensembl_gene_id: HMPREF9080_00933
symbol: EHM55129.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase domain protein; KEGG: nmn:NMCC_0138 2.2e-85 DNA ligase; K01971 DNA ligase (ATP).


ensembl_gene_id: HMPREF9080_00934
symbol: EHM55130.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cco:CCC13826_0805 5.9e-07 3-dehydroquinate dehydratase (3-dehydroquinase; type IIDHQase) K07133.


ensembl_gene_id: HMPREF9080_00937
symbol: EHM55133.1
gene_biotype: protein_coding
description:
  Thioredoxin; KEGG: pmj:P9211_11291 1.2e-27 thiol-disulfide isomerase and thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.


ensembl_gene_id: HMPREF9080_00938
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF9080_00939
symbol: EHM55135.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; KEGG: dno:DNO_0917 1.1e-99 xth-2; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00940
symbol: EHM55136.1
gene_biotype: protein_coding
description:
  Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: eam:EAMY_1232 6.1e-19 bglX1; beta-D-glucoside glucohydrolase, periplasmic; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00941
symbol: EHM55137.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rha:RHA1_ro06644 0.0040 infB; translation initiation factor IF-2 K02519.


ensembl_gene_id: HMPREF9080_00943
symbol: EHM55139.1
gene_biotype: protein_coding
description:
  FCD domain protein; KEGG: hiq:CGSHiGG_02770 2.9e-60 D-mannonate oxidoreductase K13637; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00946
symbol: EHM55109.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: xne:XNC1_3529 1.4e-17 putative chromosome partitioning related protein SOJ-like protein; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00947
symbol: EHM55110.1
gene_biotype: protein_coding
description:
  Integrating conjugative element, PFGI_1 class, ParB family protein; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00950
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMPREF9080_00951
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMPREF9080_00952
symbol: EHM55087.1
gene_biotype: protein_coding
description:
  VacJ-like protein; KEGG: ccv:CCV52592_0586 2.4e-24 S-adenosyl-L-methionine-dependent methyltransferase MraW K04754; Psort location: OuterMembrane, score: 9.92.


ensembl_gene_id: HMPREF9080_00953
symbol: EHM55088.1
gene_biotype: protein_coding
description:
  (glutamine-N5) methyltransferase, ribosomal protein L3-specific; KEGG: dno:DNO_0652 2.7e-96 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320; Psort location: Cytoplasmic, score: 9.97; Belongs to the protein N5-glutamine methyltransferase family.


ensembl_gene_id: HMPREF9080_00957
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; KEGG: dno:DNO_0246 0. leuS; leucyl-tRNA synthetase K01869; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9080_00963
symbol: EHM55098.1
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid transaminase; KEGG: nmc:NMC1833 9.4e-133 ilvE; branched-chain amino acid aminotransferase K00826; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00965
symbol: EHM55100.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dsh:Dshi_2874 1.2e-09 putative citrate lyase subunit beta; K01644 citrate lyase subunit beta / citryl-CoA lyase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00966
symbol: EHM55101.1
gene_biotype: protein_coding
description:
  Sel1 repeat protein; KEGG: mct:MCR_0405 2.8e-30 tetratricopeptide repeat family protein K07126; Psort location: Extracellular, score: 9.71.


ensembl_gene_id: HMPREF9080_00968
symbol: EHM55070.1
gene_biotype: protein_coding
description:
  Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF9080_00969
symbol: EHM55071.1
gene_biotype: protein_coding
description:
  Putative membrane alanyl aminopeptidase; KEGG: dno:DNO_0019 2.2e-204 pepN; aminopeptidase N K01256; Psort location: Cytoplasmic, score: 9.12.


ensembl_gene_id: HMPREF9080_00972
symbol: EHM55074.1
gene_biotype: protein_coding
description:
  Malate dehydrogenase; KEGG: dno:DNO_0020 1.3e-245 maeB; malic enzyme K00029; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_00981
symbol: EHM55022.1
gene_biotype: protein_coding
description:
  KEGG: cja:CJA_1512 4.6e-156 saccharopine dehydrogenase K00290; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00983
symbol: EHM55024.1
gene_biotype: protein_coding
description:
  DNA-binding helix-turn-helix protein; KEGG: apb:SAR116_1185 0.0011 probable transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_00985
symbol: EHM55026.1
gene_biotype: protein_coding
description:
  Transporter, auxin efflux carrier family protein; KEGG: azo:azo2534 3.4e-48 mdcF2; putative malonate transporter K07088; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00988
symbol: EHM55029.1
gene_biotype: protein_coding
description:
  Aconitate hydratase 2; KEGG: nmc:NMC1492 0. acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682; Psort location: CytoplasmicMembrane, score: 8.46; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: HMPREF9080_00989
symbol: EHM55030.1
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; KEGG: nde:NIDE0025 5.3e-36 putative NADH-flavin reductase K07118.


ensembl_gene_id: HMPREF9080_00991
symbol: EHM55032.1
gene_biotype: protein_coding
description:
  LysR substrate binding domain protein; KEGG: pla:Plav_2223 2.7e-32 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF9080_00993
symbol: EHM55034.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: HMPREF9080_00994
symbol: EHM55035.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: HMPREF9080_00995
symbol: EHM55036.1
gene_biotype: protein_coding
description:
  Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 3.5e-10 fadD; long-chain-fatty-acid--CoA ligase K12340.


ensembl_gene_id: HMPREF9080_00996
symbol: EHM55037.1
gene_biotype: protein_coding
description:
  Type I secretion system ATPase; KEGG: reh:H16_B0690 1.1e-131 rtxB2; toxin ABC transporter ATPase and permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_00997
symbol: EHM55038.1
gene_biotype: protein_coding
description:
  Type I secretion membrane fusion protein, HlyD family; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01000
symbol: EHM55041.1
gene_biotype: protein_coding
description:
  Membrane protein family; KEGG: ebr:ECB_03209 4.4e-29 yhfK; conserved inner membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01003
symbol: EHM55044.1
gene_biotype: protein_coding
description:
  HAD hydrolase, family IIB; KEGG: dth:DICTH_1507 4.8e-26 phosphoglycolate phosphatase, putative K07024; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01004
symbol: dinB
gene_biotype: protein_coding
description:
  Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: HMPREF9080_01005
symbol: EHM55046.1
gene_biotype: protein_coding
description:
  Oxidoreductase, aldo/keto reductase family protein; KEGG: hse:Hsero_2716 1.1e-97 oxidoreductase protein; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01008
symbol: EHM55049.1
gene_biotype: protein_coding
description:
  Hydrolase, alpha/beta domain protein; KEGG: lbi:LEPBI_II0018 1.7e-39 putative hydrolase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01010
symbol: EHM55051.1
gene_biotype: protein_coding
description:
  Peptidase, S9A/B/C family, catalytic domain protein; KEGG: smt:Smal_3481 2.9e-250 peptidase S9 prolyl oligopeptidase active site domain protein; K01322 prolyl oligopeptidase; Psort location: Periplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_01011
symbol: EHM54989.1
gene_biotype: protein_coding
description:
  Aldose 1-epimerase; KEGG: llk:LLKF_2115 5.5e-57 ytjH; aldose 1-epimerase family protein; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01012
symbol: EHM54990.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: HMPREF9080_01013
symbol: EHM54991.1
gene_biotype: protein_coding
description:
  Putative D-amino-acid transaminase; KEGG: rsq:Rsph17025_2484 2.1e-80 aminotransferase, class IV; K00824 D-alanine transaminase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01014
symbol: EHM54992.1
gene_biotype: protein_coding
description:
  Aromatic amino acid transport protein; KEGG: hiq:CGSHiGG_05890 1.1e-104 pgk; phosphoglycerate kinase K03834; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01016
symbol: EHM54973.1
gene_biotype: protein_coding
description:
  KEGG: bbt:BBta_3660 1.3e-73 ABC transporter permease ATP-binding protein K13926; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01017
symbol: glnE
gene_biotype: protein_coding
description:
  Putative [Glutamate--ammonia-ligase] adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the s [...]


ensembl_gene_id: HMPREF9080_01018
symbol: aat
gene_biotype: protein_coding
description:
  Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: HMPREF9080_01022
symbol: cmoA
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: HMPREF9080_01024
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: HMPREF9080_01026
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HMPREF9080_01028
symbol: EHM54917.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0311 1.1e-88 N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_01029
symbol: EHM54918.1
gene_biotype: protein_coding
description:
  Hydrolase, P-loop family; KEGG: ckp:ckrop_1741 3.4e-08 alanine racemase K01775; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01032
symbol: EHM54921.1
gene_biotype: protein_coding
description:
  GTP-binding domain protein; KEGG: rcu:RCOM_1485730 5.3e-06 protein with unknown function; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01034
symbol: tsaD
gene_biotype: protein_coding
description:
  Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF9080_01037
symbol: EHM54926.1
gene_biotype: protein_coding
description:
  Mrp family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HMPREF9080_01038
symbol: EHM54927.1
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: HMPREF9080_01039
symbol: EHM54928.1
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; KEGG: abo:ABO_2459 6.5e-125 hemB; delta-aminolevulinic acid dehydratase K01698; Psort location: Cytoplasmic, score: 9.97; Belongs to the ALAD family.


ensembl_gene_id: HMPREF9080_01047
symbol: EHM54936.1
gene_biotype: protein_coding
description:
  KEGG: aci:ACIAD0045 1.3e-25 dsbA; thiol:disulfide interchange protein, periplasmic, alkali-inducible K03673; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_01049
symbol: EHM54938.1
gene_biotype: protein_coding
description:
  KEGG: dar:Daro_3661 3.6e-53 nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01050
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: HMPREF9080_01051
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMPREF9080_01052
symbol: EHM54941.1
gene_biotype: protein_coding
description:
  Putative type IV pilus biogenesis/stability protein PilW; KEGG: zma:100381672 2.1e-06 cl27878_1(278); LOC100381672; K09667 polypeptide N-acetylglucosaminyltransferase.


ensembl_gene_id: HMPREF9080_01055
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; KEGG: dno:DNO_0517 5.9e-124 hisS; histidyl-tRNA synthetase K01892; Psort location: Cytoplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_01056
symbol: EHM54945.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; KEGG: smt:Smal_0130 0.0012 hypothetical protein; K02496 uroporphyrin-III C-methyltransferase.


ensembl_gene_id: HMPREF9080_01057
symbol: bamB
gene_biotype: protein_coding
description:
  Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HMPREF9080_01058
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF9080_01060
symbol: EHM54949.1
gene_biotype: protein_coding
description:
  Sugar efflux transporter; KEGG: apb:SAR116_2000 8.3e-09 drug resistance transporter, Bcr/CflA subfamily K07552; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01061
symbol: EHM54950.1
gene_biotype: protein_coding
description:
  Hydrolase, NUDIX family; KEGG: vap:Vapar_6281 2.4e-70 NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase.


ensembl_gene_id: HMPREF9080_01063
symbol: EHM54952.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bcx:BCA_2685 3.4e-41 acetamidase/formamidase family protein; K01426 amidase.


ensembl_gene_id: HMPREF9080_01066
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: HMPREF9080_01067
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.


ensembl_gene_id: HMPREF9080_01068
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: HMPREF9080_01069
symbol: EHM54958.1
gene_biotype: protein_coding
description:
  KEGG: reh:H16_A3329 1.5e-72 M61 subfamily peptidase K01423; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01070
symbol: EHM54959.1
gene_biotype: protein_coding
description:
  KEGG: csa:Csal_2440 2.0e-233 ATP-dependent Clp protease ATP-binding subunit ClpA K03694; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMPREF9080_01074
symbol: EHM54845.1
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase, membrane binding protein; KEGG: nmi:NMO_0906 6.2e-65 dld; D-lactate dehydrogenase K03777; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01075
symbol: EHM54846.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: HMPREF9080_01077
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF9080_01079
symbol: EHM54850.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0542 5.2e-13 bvg accessory factor family protein; K03525 type III pantothenate kinase.


ensembl_gene_id: HMPREF9080_01081
symbol: EHM54852.1
gene_biotype: protein_coding
description:
  KEGG: vsp:VS_2868 1.0e-87 ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01083
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: HMPREF9080_01084
symbol: EHM54855.1
gene_biotype: protein_coding
description:
  Sel1 repeat protein; KEGG: mct:MCR_0405 2.3e-28 tetratricopeptide repeat family protein K07126; Psort location: Extracellular, score: 9.71.


ensembl_gene_id: HMPREF9080_01087
symbol: EHM54858.1
gene_biotype: protein_coding
description:
  KEGG: dac:Daci_5702 4.8e-42 glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01090
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: HMPREF9080_01091
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: HMPREF9080_01099
symbol: EHM54870.1
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bsu:BSU23780 3.2e-52 yqjQ; putative metabolite dehydrogenase, NAD-binding K07124; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9080_01100
symbol: EHM54871.1
gene_biotype: protein_coding
description:
  Putative membrane protein; KEGG: apb:SAR116_2069 0.00094 ABC transporter, membrane spanning protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01102
symbol: EHM54873.1
gene_biotype: protein_coding
description:
  Putative uracil permease; KEGG: hiq:CGSHiGG_01870 1.9e-104 upp; uracil phosphoribosyltransferase K02824; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01103
symbol: EHM54874.1
gene_biotype: protein_coding
description:
  Nitroreductase family protein; KEGG: chu:CHU_1678 6.2e-49 yfkO; NAD(P)H-flavin oxidoreductase K00353; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01115
symbol: EHM54722.1
gene_biotype: protein_coding
description:
  KEGG: cgr:CAGL0F02805g 4.5e-06 hypothetical protein; K00587 protein-S-isoprenylcysteine O-methyltransferase.


ensembl_gene_id: HMPREF9080_01127
symbol: EHM54683.1
gene_biotype: protein_coding
description:
  Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: rcp:RCAP_rcc01900 2.0e-22 hemolysin-type calcium-binding repeat family protein; Psort location: Extracellular, score: 10.00.


ensembl_gene_id: HMPREF9080_01128
symbol: EHM54654.1
gene_biotype: protein_coding
description:
  Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: cch:Cag_0406 1.9e-27 alkaline phosphatase K01077; Psort location: Extracellular, score: 9.96.


ensembl_gene_id: HMPREF9080_01129
symbol: EHM54655.1
gene_biotype: protein_coding
description:
  Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: eci:UTI89_C4926 5.6e-17 hlyA; hemolysin A K11005; Psort location: Extracellular, score: 10.00.


ensembl_gene_id: HMPREF9080_01130
symbol: EHM54656.1
gene_biotype: protein_coding
description:
  Toxin RTX-I translocation ATP-binding protein; KEGG: cti:pRALTA_0240 1.3e-231 type I secretion system ATP-binding component K11004; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01131
symbol: EHM54657.1
gene_biotype: protein_coding
description:
  Type I secretion membrane fusion protein, HlyD family; KEGG: nmi:NMO_0592 0.0016 iga1; IgA-specific serine endopeptidase K01347; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01135
symbol: EHM54661.1
gene_biotype: protein_coding
description:
  Sel1 repeat protein; KEGG: mct:MCR_0405 1.8e-28 tetratricopeptide repeat family protein K07126; Psort location: Extracellular, score: 9.72.


ensembl_gene_id: HMPREF9080_01136
symbol: EHM54662.1
gene_biotype: protein_coding
description:
  CBS domain protein; KEGG: swp:swp_3771 1.5e-45 CBS domain protein; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01137
symbol: EHM54663.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: swp:swp_3771 6.7e-36 CBS domain protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01138
symbol: EHM54664.1
gene_biotype: protein_coding
description:
  Cytochrome c assembly protein; KEGG: ypi:YpsIP31758_3259 0.0041 dmsC; anaerobic dimethyl sulfoxide reductase, C subunit K07308; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01139
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: HMPREF9080_01140
symbol: EHM54666.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rle:pRL100433 0.0089 putative allophanate hydrolase subunit 2; K01457 allophanate hydrolase.


ensembl_gene_id: HMPREF9080_01142
symbol: EHM54668.1
gene_biotype: protein_coding
description:
  KEGG: nmn:NMCC_1290 3.0e-136 lldA; L-lactate dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome); Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01144
symbol: EHM54670.1
gene_biotype: protein_coding
description:
  Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HMPREF9080_01145
symbol: EHM54671.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bmj:BMULJ_02139 0.0085 hrpA; ATP-dependent helicase; K03578 ATP-dependent helicase HrpA; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01149
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF9080_01152
symbol: EHM54629.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_1315 0.00011 nucleotide-binding protein implicated in inhibition of septum formation K06287; Belongs to the Maf family.


ensembl_gene_id: HMPREF9080_01155
symbol: EHM54632.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0493 2.2e-53 rng; ribonuclease G K08301; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01159
symbol: EHM54607.1
gene_biotype: protein_coding
description:
  Iron permease FTR1 family protein; KEGG: ccv:CCV52592_0433 4.3e-112 fumarate hydratase class II (fumarase C) K01679; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01165
symbol: EHM54573.1
gene_biotype: protein_coding
description:
  KEGG: cch:Cag_1938 7.5e-69 Sel1 repeat-containing protein K07126; Psort location: Extracellular, score: 9.72.


ensembl_gene_id: HMPREF9080_01167
symbol: EHM54575.1
gene_biotype: protein_coding
description:
  KEGG: cch:Cag_1938 6.0e-83 Sel1 repeat-containing protein K07126; Psort location: Extracellular, score: 9.72; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01168
symbol: EHM54576.1
gene_biotype: protein_coding
description:
  Sel1 repeat protein; KEGG: mct:MCR_0405 3.0e-33 tetratricopeptide repeat family protein K07126; Psort location: Extracellular, score: 9.72; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01169
symbol: EHM54577.1
gene_biotype: protein_coding
description:
  Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily; KEGG: azo:azo3929 2.1e-25 ccmG; protein disulfide-isomerase K02199; Psort location: CytoplasmicMembrane, score: 9.97.


ensembl_gene_id: HMPREF9080_01170
symbol: EHM54578.1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmF; KEGG: vfi:VF_1819 3.5e-149 ccmF; heme lyase, CcmF subunit K02198; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01171
symbol: ccmE
gene_biotype: protein_coding
description:
  Putative cytochrome C-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: HMPREF9080_01172
symbol: EHM54580.1
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: HMPREF9080_01174
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: HMPREF9080_01175
symbol: EHM54583.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF9080_01176
symbol: EHM54584.1
gene_biotype: protein_coding
description:
  Carbamate kinase; KEGG: hiq:CGSHiGG_06295 1.8e-147 carbamate kinase K00926; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01178
symbol: EHM54586.1
gene_biotype: protein_coding
description:
  Putative leucine-responsive regulatory protein; KEGG: apb:SAR116_2220 8.9e-18 transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01180
symbol: EHM54588.1
gene_biotype: protein_coding
description:
  Carbon starvation protein CstA; KEGG: lga:LGAS_0998 0.0069 hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01184
symbol: EHM54473.1
gene_biotype: protein_coding
description:
  Copper-exporting ATPase; KEGG: nmc:NMC1262 1.2e-288 putative cation-transporting ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01185
symbol: EHM54474.1
gene_biotype: protein_coding
description:
  Mercuric-ion-binding periplasmic protein MerP family protein; KEGG: mgl:MGL_2408 1.6e-10 hypothetical protein; K01533 Cu2+-exporting ATPase.


ensembl_gene_id: HMPREF9080_01186
symbol: EHM54475.1
gene_biotype: protein_coding
description:
  KEGG: eci:UTI89_C3737 8.0e-17 zntR; zinc-responsive transcriptional regulator K13638; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01187
symbol: EHM54476.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0916 1.9e-88 peptidylprolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01189
symbol: EHM54478.1
gene_biotype: protein_coding
description:
  Glucans biosynthesis glucosyltransferase H family protein; KEGG: dno:DNO_0626 9.0e-215 mdoH; glucosyltransferase MdoH; K03669 membrane glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01191
symbol: EHM54480.1
gene_biotype: protein_coding
description:
  Glucans biosynthesis protein D family protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: HMPREF9080_01194
symbol: EHM54483.1
gene_biotype: protein_coding
description:
  Transporter, anaerobic C4-dicarboxylate uptake C family; KEGG: ccv:CCV52592_2073 3.8e-20 orotate phosphoribosyltransferase (OprT) (oprtase); Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01196
symbol: EHM54485.1
gene_biotype: protein_coding
description:
  KEGG: pam:PANA_2983 2.4e-63 speG; SpeG; K00657 diamine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01198
symbol: EHM54487.1
gene_biotype: protein_coding
description:
  CoA ligase domain protein; KEGG: dno:DNO_1002 5.4e-82 long-chain-fatty-acid--CoA ligase K01897; Psort location: Cytoplasmic, score: 9.97; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01199
symbol: EHM54488.1
gene_biotype: protein_coding
description:
  CoA ligase domain protein; KEGG: dno:DNO_1002 3.5e-71 long-chain-fatty-acid--CoA ligase K01897; Psort location: Cytoplasmic, score: 9.97; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01204
symbol: rpmF
gene_biotype: protein_coding
description:
  Ribosomal protein L32; KEGG: apb:SAR116_0011 5.6e-09 ribosomal protein L32 K02911; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: HMPREF9080_01205
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HMPREF9080_01206
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl carrier protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMPREF9080_01207
symbol: EHM54496.1
gene_biotype: protein_coding
description:
  [acyl-carrier-protein] S-malonyltransferase; KEGG: dno:DNO_1208 1.3e-85 fabD; malonyl CoA-acyl carrier protein transacylase K00645; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01208
symbol: EHM54497.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9080_01210
symbol: EHM54499.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF9080_01211
symbol: mltG
gene_biotype: protein_coding
description:
  YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: HMPREF9080_01212
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HMPREF9080_01213
symbol: EHM54502.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_1214 8.6e-52 holB; DNA polymerase III, delta' subunit; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01216
symbol: EHM54505.1
gene_biotype: protein_coding
description:
  KEGG: yen:YE1296 2.7e-112 glucose-1-phosphatase/inositol phosphatase; K01085 glucose-1-phosphatase; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_01217
symbol: EHM54506.1
gene_biotype: protein_coding
description:
  Kinase, PfkB family; KEGG: sme:SM_b21374 5.9e-76 putative sugar kinase, PfkB family protein K00924; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01218
symbol: EHM54507.1
gene_biotype: protein_coding
description:
  Putative ribose transport system permease protein RbsC; KEGG: smd:Smed_4767 6.7e-123 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF9080_01219
symbol: EHM54508.1
gene_biotype: protein_coding
description:
  KEGG: pde:Pden_4850 9.8e-170 ABC transporter related; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.


ensembl_gene_id: HMPREF9080_01220
symbol: EHM54509.1
gene_biotype: protein_coding
description:
  Putative D-ribose-binding periplasmic protein; KEGG: oan:Oant_0292 9.9e-106 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_01224
symbol: EHM54513.1
gene_biotype: protein_coding
description:
  Membrane protein, MarC family; KEGG: sbc:SbBS512_E3890 3.4e-41 putative dITP- and XTP- hydrolase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01225
symbol: EHM54514.1
gene_biotype: protein_coding
description:
  Putative azaleucine resistance protein AzlC; KEGG: apb:SAR116_0734 2.9e-19 AzlC-like protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01227
symbol: EHM54516.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: HMPREF9080_01229
symbol: EHM54518.1
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase domain protein; KEGG: dno:DNO_0236 2.6e-73 trpS; tryptophanyl-tRNA synthetase K01867; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9080_01231
symbol: EHM54520.1
gene_biotype: protein_coding
description:
  Peptidase, S54 family; KEGG: sbc:SbBS512_E3806 2.3e-28 intramembrane serine protease GlpG K02441; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01232
symbol: EHM54521.1
gene_biotype: protein_coding
description:
  KEGG: msu:MS0671 7.0e-263 gsp; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase K01460; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01234
symbol: glyQ
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0701 2.7e-128 glyQ; glycyl-tRNA synthetase subunit alpha K01878; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01235
symbol: glyS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase, beta subunit; KEGG: dno:DNO_0702 8.5e-219 glyS; glycyl-tRNA synthetase, beta subunit K01879; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01239
symbol: EHM54528.1
gene_biotype: protein_coding
description:
  MutL dimerization domain protein; KEGG: apb:SAR116_1141 2.9e-44 DNA mismatch repair enzyme K03572; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01241
symbol: EHM54530.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: reh:H16_A2653 3.4e-05 G:T/U mismatch-specific DNA glycosylase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01242
symbol: EHM54531.1
gene_biotype: protein_coding
description:
  Transcriptional activator protein CopR; KEGG: rha:RHA1_ro05622 1.6e-43 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01243
symbol: EHM54532.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0902 1.7e-124 degQ; serine protease K01362; Psort location: Periplasmic, score: 9.44; Belongs to the peptidase S1C family.


ensembl_gene_id: HMPREF9080_01244
symbol: EHM54533.1
gene_biotype: protein_coding
description:
  HAMP domain protein; KEGG: cpu:cpfrc_01740 5.8e-09 phoS; two-component system sensor kinase protein.


ensembl_gene_id: HMPREF9080_01245
symbol: EHM54534.1
gene_biotype: protein_coding
description:
  ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rle:RL1442 2.4e-40 putative two-component sensor histidine kinase transcriptional regulatory protein; K00936; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01247
symbol: EHM54536.1
gene_biotype: protein_coding
description:
  Flavodoxin; KEGG: smt:Smal_0983 1.9e-36 flavodoxin/nitric oxide synthase; K00380 sulfite reductase (NADPH) flavoprotein alpha-component.


ensembl_gene_id: HMPREF9080_01248
symbol: EHM54537.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: xom:XOO_0370 2.8e-20 iron-uptake factor; K00380 sulfite reductase (NADPH) flavoprotein alpha-component; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01251
symbol: nadK
gene_biotype: protein_coding
description:
  Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF9080_01252
symbol: EHM54541.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase family protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.


ensembl_gene_id: HMPREF9080_01254
symbol: EHM54543.1
gene_biotype: protein_coding
description:
  Agmatinase; KEGG: dvl:Dvul_2513 1.9e-72 putative agmatinase; K01480 agmatinase; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family.


ensembl_gene_id: HMPREF9080_01256
symbol: EHM54545.1
gene_biotype: protein_coding
description:
  KEGG: bpt:Bpet4372 5.6e-16 4'-phosphopantetheinyl transferase, fragment K06133; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: HMPREF9080_01259
symbol: EHM54548.1
gene_biotype: protein_coding
description:
  Transporter, gluconate:H+ symporter family; KEGG: eci:UTI89_C3106 4.3e-73 ygbN; inner membrane permease YgbN K03299; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01264
symbol: EHM54429.1
gene_biotype: protein_coding
description:
  KEGG: azc:AZC_1826 1.4e-76 phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.


ensembl_gene_id: HMPREF9080_01266
symbol: EHM54373.1
gene_biotype: protein_coding
description:
  KEGG: aeh:Mlg_0013 2.1e-183 L-glutamine synthetase K01915; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01267
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HMPREF9080_01271
symbol: EHM54375.1
gene_biotype: protein_coding
description:
  Aminotransferase, class I/II; KEGG: hip:CGSHiEE_01630 1.7e-142 aminotransferase AlaT; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01275
symbol: EHM54338.1
gene_biotype: protein_coding
description:
  Dual specificity phosphatase, catalytic domain protein; KEGG: pen:PSEEN0708 4.4e-71 tyrosine phosphatase K01112; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01277
symbol: fur
gene_biotype: protein_coding
description:
  KEGG: mct:MCR_0333 7.7e-35 fur; ferric uptake regulation protein Fur K03711; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.


ensembl_gene_id: HMPREF9080_01278
symbol: rpoH
gene_biotype: protein_coding
description:
  Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: HMPREF9080_01280
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: HMPREF9080_01281
symbol: EHM54344.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hip:CGSHiEE_06720 5.1e-15 CTP synthetase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01282
symbol: EHM54345.1
gene_biotype: protein_coding
description:
  KEGG: vex:VEA_003486 1.1e-42 NAD-dependent protein deacetylase of SIR2 family; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01283
symbol: EHM54346.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pmy:Pmen_0790 2.5e-22 silent information regulator protein Sir2; K12410 NAD-dependent deacetylase.


ensembl_gene_id: HMPREF9080_01284
symbol: EHM54347.1
gene_biotype: protein_coding
description:
  Peptidase, S41 family; KEGG: dno:DNO_1034 1.7e-195 carboxyl-terminal protease family protein K03797; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the peptidase S41A family.


ensembl_gene_id: HMPREF9080_01285
symbol: EHM54348.1
gene_biotype: protein_coding
description:
  Transketolase; KEGG: dno:DNO_1035 6.1e-209 tkt; transketolase K00615; Psort location: Cytoplasmic, score: 9.26; Belongs to the transketolase family.


ensembl_gene_id: HMPREF9080_01286
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; KEGG: dno:DNO_1036 1.4e-136 pgk; phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01294
symbol: EHM54274.1
gene_biotype: protein_coding
description:
  Putative membrane protein; KEGG: apb:SAR116_2040 4.4e-16 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01296
symbol: EHM54276.1
gene_biotype: protein_coding
description:
  Putative oxygen-insensitive NADPH nitroreductase; KEGG: apl:APL_0483 8.4e-77 nitroreductase A; K10678 nitroreductase; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: HMPREF9080_01298
symbol: EHM54278.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: epy:EpC_10520 0.00010 quiA; quinate/shikimate dehydrogenase [pyrroloquinoline-quinone] K05358; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01300
symbol: EHM54280.1
gene_biotype: protein_coding
description:
  Putative glutamine--tRNA ligase; KEGG: dno:DNO_1108 2.2e-156 glnS; glutaminyl-tRNA synthetase K01886; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01302
symbol: EHM54282.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cja:CJA_1908 4.0e-22 slt23E; lytic murein transglycosylase, putative, slt23E.


ensembl_gene_id: HMPREF9080_01303
symbol: EHM54283.1
gene_biotype: protein_coding
description:
  Putative ribosome maturation factor RimN; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: HMPREF9080_01304
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: HMPREF9080_01307
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMPREF9080_01310
symbol: metN
gene_biotype: protein_coding
description:
  Putative D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF9080_01311
symbol: EHM54291.1
gene_biotype: protein_coding
description:
  D-methionine transport system permease protein MetI; KEGG: saa:SAUSA300_2392 2.0e-13 opuCb; glycine betaine/carnitine/choline ABC transporter K05846; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01322
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: HMPREF9080_01324
symbol: EHM54304.1
gene_biotype: protein_coding
description:
  KEGG: aap:NT05HA_0113 0. formate acetyltransferase; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01325
symbol: pgi
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0163 9.2e-174 pgi; glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.


ensembl_gene_id: HMPREF9080_01326
symbol: EHM54306.1
gene_biotype: protein_coding
description:
  KEGG: cyp:PCC8801_3290 1.2e-139 phosphoglucomutase; K01835 phosphoglucomutase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01329
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: HMPREF9080_01330
symbol: EHM54310.1
gene_biotype: protein_coding
description:
  KEGG: mct:MCR_0330 1.1e-42 metR; HTH-type transcriptional regulator MetR K03576; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF9080_01332
symbol: EHM54312.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bvu:BVU_3037 7.9e-10 putative exonuclease/DNA polymerase III epsilon C; K02342 DNA polymerase III subunit epsilon.


ensembl_gene_id: HMPREF9080_01335
symbol: EHM54315.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: reh:H16_A2554 5.9e-09 era, bex, rbaA, sdgE, yqfH; GTP-binding protein Era K03595; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01337
symbol: EHM54317.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bao:BAMF_3918 0.00048 thdF; tRNA modification GTPase TrmE; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01338
symbol: EHM54318.1
gene_biotype: protein_coding
description:
  Universal bacterial protein YeaZ; KEGG: pen:PSEEN1266 4.4e-32 glycoprotein endopeptidase metalloprotease K01423.


ensembl_gene_id: HMPREF9080_01339
symbol: EHM54319.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0572 5.7e-94 helicase domain-containing protein; K03722 ATP-dependent DNA helicase DinG; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01341
symbol: EHM54321.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; KEGG: rrs:RoseRS_0666 4.1e-08 protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Periplasmic, score: 9.83.


ensembl_gene_id: HMPREF9080_01342
symbol: EHM54322.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; KEGG: kpn:KPN_00773 2.4e-120 galE; UDP-galactose-4-epimerase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: HMPREF9080_01344
symbol: EHM54324.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0457 4.5e-30 holC; DNA polymerase III chi subunit K02339; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01346
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: HMPREF9080_01348
symbol: EHM54328.1
gene_biotype: protein_coding
description:
  Ser/Thr phosphatase family protein; KEGG: bmd:BMD_2458 1.5e-49 calcineurin-like phosphoesterase K07098; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01349
symbol: EHM54329.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: HMPREF9080_01350
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: HMPREF9080_01355
symbol: EHM54214.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mkm:Mkms_3050 4.9e-07 coaE; dephospho-CoA kinase/protein folding accessory domain-containing protein K00859; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01357
symbol: EHM54216.1
gene_biotype: protein_coding
description:
  PTS system, Lactose/Cellobiose specific IIB subunit; KEGG: efa:EF1128 1.9e-15 sgaB; phosphotransferase enzyme II, B compnent SgaB; K02822 PTS system, ascorbate-specific IIB component.


ensembl_gene_id: HMPREF9080_01359
symbol: EHM54217.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: HMPREF9080_01360
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMPREF9080_01361
symbol: EHM54219.1
gene_biotype: protein_coding
description:
  KEGG: cvi:CV_2557 2.6e-121 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpX chaperone family.


ensembl_gene_id: HMPREF9080_01362
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF9080_01363
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF9080_01366
symbol: EHM54223.1
gene_biotype: protein_coding
description:
  KEGG: noc:Noc_1228 6.1e-42 ABC transporter, ATPase subunit K09691; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01369
symbol: EHM54226.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate glucose phosphotransferase; KEGG: hel:HELO_3594 2.7e-119 wcaJ; K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01370
symbol: EHM54227.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, group 2 family protein; KEGG: rer:RER_02120 5.7e-27 glfT, glfT2; galactofuranosyltransferase; Belongs to the ketol-acid reductoisomerase family.


ensembl_gene_id: HMPREF9080_01372
symbol: EHM54207.1
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HMPREF9080_01374
symbol: EHM54209.1
gene_biotype: protein_coding
description:
  Acetolactate synthase, small subunit; KEGG: azo:azo3155 2.1e-41 ilvH; acetolactate synthase 3 regulatory subunit K01653; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01375
symbol: EHM54210.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rma:Rmag_0445 1.3e-21 acetolactate synthase, large subunit K01652; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01376
symbol: EHM54129.1
gene_biotype: protein_coding
description:
  KEGG: hna:Hneap_1902 1.5e-175 acetolactate synthase, large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01380
symbol: EHM54132.1
gene_biotype: protein_coding
description:
  HAD hydrolase, family IA, variant 3; KEGG: sax:USA300HOU_0566 1.7e-37 phosphatase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01382
symbol: EHM54134.1
gene_biotype: protein_coding
description:
  Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: HMPREF9080_01383
symbol: EHM54135.1
gene_biotype: protein_coding
description:
  Transporter, major facilitator family protein; KEGG: apb:SAR116_1122 2.0e-11 tetracycline resistance protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01387
symbol: EHM54139.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0727 8.8e-50 TatD family deoxyribonuclease; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01389
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF9080_01392
symbol: EHM54144.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_2461 4.2e-21 HI0933 family protein K07007; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01393
symbol: EHM54145.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2461 6.6e-29 HI0933 family protein K07007; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01395
symbol: EHM54147.1
gene_biotype: protein_coding
description:
  Putative maltose O-acetyltransferase; KEGG: aat:D11S_0185 8.1e-56 galactoside O-acetyltransferase (GAT) (thiogalactoside acetyltransferase); K00661 maltose O-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01396
symbol: EHM54148.1
gene_biotype: protein_coding
description:
  Nickel-dependent hydrogenase B-type cytochrome subunit; KEGG: bpt:Bpet1639 1.5e-22 putative cytochrome b(561) K12262; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01397
symbol: EHM54149.1
gene_biotype: protein_coding
description:
  Transporter, auxin efflux carrier family protein; KEGG: azo:azo2550 1.3e-48 mdcF3; putative malonate transporter K07088; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01398
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: HMPREF9080_01400
symbol: EHM54152.1
gene_biotype: protein_coding
description:
  Lysine-specific permease; KEGG: eci:UTI89_C0120 5.3e-68 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01401
symbol: EHM54153.1
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: HMPREF9080_01402
symbol: EHM54154.1
gene_biotype: protein_coding
description:
  comF family protein; KEGG: ddd:Dda3937_00349 3.2e-22 gntX, yhgH; gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01403
symbol: EHM54155.1
gene_biotype: protein_coding
description:
  KEGG: hso:HS_0278 1.3e-64 suhB; inositol-1(or 4)-monophosphatase K01092; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01404
symbol: EHM54156.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_0474 5.0e-56 Zn-dependent hydrolase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01409
symbol: EHM54159.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sga:GALLO_1137 5.7e-22 dra; deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01410
symbol: EHM54160.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: HMPREF9080_01411
symbol: EHM54161.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ahe:Arch_1729 5.2e-29 ribokinase; K00852 ribokinase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01414
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF9080_01415
symbol: EHM54165.1
gene_biotype: protein_coding
description:
  FimV domain protein; KEGG: htu:Htur_0958 2.9e-12 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA.


ensembl_gene_id: HMPREF9080_01416
symbol: EHM54166.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bcb:BCB4264_A5314 0.0064 putative cell wall endopeptidase, NlpC/P60 family.


ensembl_gene_id: HMPREF9080_01417
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: HMPREF9080_01418
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: HMPREF9080_01419
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: HMPREF9080_01421
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HMPREF9080_01424
symbol: EHM54174.1
gene_biotype: protein_coding
description:
  KEGG: aeh:Mlg_1882 5.0e-182 cbb3-type cytochrome c oxidase subunit I; K00404 cb-type cytochrome c oxidase subunit I; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: HMPREF9080_01425
symbol: EHM54175.1
gene_biotype: protein_coding
description:
  KEGG: ppf:Pput_1617 6.4e-63 cbb3-type cytochrome c oxidase subunit II; K00405 cb-type cytochrome c oxidase subunit II; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01427
symbol: EHM54177.1
gene_biotype: protein_coding
description:
  KEGG: lhk:LHK_00998 3.5e-62 probable cytochrome-c oxidase, subunit III K00406; Psort location: Periplasmic, score: 9.83.


ensembl_gene_id: HMPREF9080_01431
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF9080_01432
symbol: EHM54108.1
gene_biotype: protein_coding
description:
  Sigma-70 factor, region 1.1; KEGG: ddd:Dda3937_03534 5.1e-07 rpoD, alt; RNA polymerase sigma-70 (sigma D) factor K03086; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01433
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMPREF9080_01434
symbol: EHM54110.1
gene_biotype: protein_coding
description:
  YqeY-like protein; KEGG: apb:SAR116_2231 6.8e-20 GatB/YqeY K09117; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01435
symbol: rpsU
gene_biotype: protein_coding
description:
  Ribosomal protein S21; KEGG: sew:SeSA_A3399 2.5e-22 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: HMPREF9080_01440
symbol: EHM54116.1
gene_biotype: protein_coding
description:
  Putative permease; KEGG: swp:swp_1190 1.2e-134 xanthine/uracil/vitamin C permease K06901; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01446
symbol: smc
gene_biotype: protein_coding
description:
  Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF9080_01448
symbol: EHM54081.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pen:PSEEN2212 1.2e-29 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01449
symbol: EHM54082.1
gene_biotype: protein_coding
description:
  FtsK/SpoIIIE family protein; KEGG: pen:PSEEN2212 8.3e-86 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: HMPREF9080_01450
symbol: lolA
gene_biotype: protein_coding
description:
  Putative outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: HMPREF9080_01451
symbol: EHM54084.1
gene_biotype: protein_coding
description:
  KEGG: sde:Sde_1695 1.2e-114 recombination factor protein RarA K07478; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01454
symbol: EHM54087.1
gene_biotype: protein_coding
description:
  Caspase domain protein; KEGG: cch:Cag_1938 5.7e-58 Sel1 repeat-containing protein K07126; Psort location: Extracellular, score: 8.44.


ensembl_gene_id: HMPREF9080_01459
symbol: EHM54049.1
gene_biotype: protein_coding
description:
  Methyltransferase domain protein; KEGG: sme:SM_b21410 4.8e-26 putative methyltransferase, S-adenosyl-L-methionine (SAM)-MTase protein.


ensembl_gene_id: HMPREF9080_01460
symbol: EHM54050.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0309 3.2e-100 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01465
symbol: EHM54055.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cpo:COPRO5265_1356 4.9e-49 Mn-containing catalase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01467
symbol: pcp
gene_biotype: protein_coding
description:
  Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: HMPREF9080_01468
symbol: EHM54047.1
gene_biotype: protein_coding
description:
  YigZ family protein; KEGG: ctu:Ctu_02790 3.9e-24 yigZ; hypothetical protein; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01470
symbol: EHM54020.1
gene_biotype: protein_coding
description:
  S4 domain protein; KEGG: hiq:CGSHiGG_06085 6.9e-11 glucose-6-phosphate 1-dehydrogenase K04762; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01471
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: HMPREF9080_01472
symbol: EHM54022.1
gene_biotype: protein_coding
description:
  Septum site-determining protein MinD; KEGG: eci:UTI89_C1360 8.3e-102 minD; cell division inhibitor MinD K03609; Psort location: Cytoplasmic, score: 9.12.


ensembl_gene_id: HMPREF9080_01473
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: HMPREF9080_01474
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; KEGG: tin:Tint_0007 3.2e-84 glucokinase K00845; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial glucokinase family.


ensembl_gene_id: HMPREF9080_01475
symbol: EHM54025.1
gene_biotype: protein_coding
description:
  Unspecific monooxygenase; KEGG: bmb:BruAb2_0813 2.3e-97 heme-thiolate monooxygenase; K00517; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the cytochrome P450 family.


ensembl_gene_id: HMPREF9080_01478
symbol: EHM54028.1
gene_biotype: protein_coding
description:
  Glyoxalase family protein; KEGG: lba:Lebu_0185 4.2e-43 glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase.


ensembl_gene_id: HMPREF9080_01479
symbol: EHM54029.1
gene_biotype: protein_coding
description:
  KEGG: aap:NT05HA_1126 7.9e-26 phosphotransferase system, galactitol-specific IIB component; K02822 PTS system, ascorbate-specific IIB component.


ensembl_gene_id: HMPREF9080_01480
symbol: EHM54030.1
gene_biotype: protein_coding
description:
  Putative sugar-specific permease, SgaT/UlaA; KEGG: sax:USA300HOU_0350 4.5e-117 ulaA; PTS system ascorbate-specific transporter subunit IIC K03475; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01481
symbol: EHM54031.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sax:USA300HOU_0350 1.9e-07 ulaA; PTS system ascorbate-specific transporter subunit IIC K03475; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01482
symbol: EHM54032.1
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin, Grx4 family; KEGG: hiq:CGSHiGG_09520 3.0e-33 hemH; ferrochelatase K07390; Psort location: Cytoplasmic, score: 8.96; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: HMPREF9080_01485
symbol: EHM53967.1
gene_biotype: protein_coding
description:
  General L-amino acid-binding periplasmic protein AapJ; KEGG: apb:SAR116_0451 2.6e-89 glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein K09969; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_01487
symbol: EHM53969.1
gene_biotype: protein_coding
description:
  Tat pathway signal sequence domain protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: HMPREF9080_01488
symbol: EHM53970.1
gene_biotype: protein_coding
description:
  Von Willebrand factor type A domain protein; KEGG: mka:MK0192 1.2e-05 chlI, chlD; Mg-chelatase subunit ChlI/ChlD; K03405 magnesium chelatase subunit I.


ensembl_gene_id: HMPREF9080_01489
symbol: EHM53971.1
gene_biotype: protein_coding
description:
  Carbohydrate phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMPREF9080_01490
symbol: EHM53972.1
gene_biotype: protein_coding
description:
  Putative glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMPREF9080_01492
symbol: EHM53974.1
gene_biotype: protein_coding
description:
  Putative DNA protection during starvation protein 2; KEGG: ttu:TERTU_2584 8.7e-43 Dps family protein K04047; Psort location: Cytoplasmic, score: 9.97; Belongs to the Dps family.


ensembl_gene_id: HMPREF9080_01494
symbol: EHM53976.1
gene_biotype: protein_coding
description:
  Trypsin; KEGG: cps:CPS_0482 1.0e-55 serine protease K01362; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_01495
symbol: EHM53977.1
gene_biotype: protein_coding
description:
  S4 domain protein; KEGG: dno:DNO_1321 2.7e-48 tyrS; tyrosyl-tRNA synthetase K01866; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01496
symbol: EHM53978.1
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9080_01498
symbol: EHM53980.1
gene_biotype: protein_coding
description:
  KEGG: hso:HS_0108 4.0e-141 fab; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: HMPREF9080_01499
symbol: EHM53981.1
gene_biotype: protein_coding
description:
  Putative 3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: hsm:HSM_1992 6.3e-88 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01501
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: HMPREF9080_01505
symbol: EHM53987.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; KEGG: dno:DNO_0117 2.1e-39 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK K00950; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01506
symbol: pcnB
gene_biotype: protein_coding
description:
  Putative polynucleotide adenylyltransferase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: HMPREF9080_01508
symbol: EHM53990.1
gene_biotype: protein_coding
description:
  O-antigen polymerase; KEGG: enc:ECL_00135 3.2e-10 hypothetical protein; K02847 O-antigen ligase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01509
symbol: EHM53991.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, group 2 family protein; KEGG: mct:MCR_1093 8.2e-134 lgt3; glucosyltransferase Lgt3.


ensembl_gene_id: HMPREF9080_01512
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: HMPREF9080_01513
symbol: EHM53995.1
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, transmembrane protein, LolC/E family; KEGG: apb:SAR116_0522 6.8e-59 ABC-type transport system, permease component K09808; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01514
symbol: EHM53996.1
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: HMPREF9080_01516
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HMPREF9080_01518
symbol: EHM54000.1
gene_biotype: protein_coding
description:
  Response regulator receiver domain protein; KEGG: noc:Noc_0126 4.6e-140 CheA signal transduction histidine kinase K02487:K06596; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01519
symbol: EHM54001.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sml:Smlt3670 1.4e-10 frzE, pilL; putative gliding motility sensor histidine kinase response regulator fusion transcriptional regulatory protein K02487:K06596.


ensembl_gene_id: HMPREF9080_01520
symbol: EHM53946.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mau:Micau_5952 0.0082 DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01522
symbol: EHM53948.1
gene_biotype: protein_coding
description:
  KEGG: bpu:BPUM_2789 7.2e-34 methyl-accepting chemotaxis protein K03406; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01523
symbol: EHM53949.1
gene_biotype: protein_coding
description:
  CheW-like protein; KEGG: hpa:HPAG1_1001 9.7e-05 CheA-MCP coupling protein K03408; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01524
symbol: EHM53950.1
gene_biotype: protein_coding
description:
  KEGG: ava:Ava_0508 6.8e-20 response regulator receiver domain-containing protein K02658; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01525
symbol: EHM53951.1
gene_biotype: protein_coding
description:
  KEGG: noc:Noc_0131 6.4e-24 response regulator receiver K02657; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01526
symbol: EHM53952.1
gene_biotype: protein_coding
description:
  RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HMPREF9080_01528
symbol: EHM53954.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; KEGG: dno:DNO_1100 6.1e-209 lpdA; dihydrolipoamide dehydrogenase K00382; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01529
symbol: EHM53873.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulatory protein QseB; KEGG: bvi:Bcep1808_6298 9.1e-38 multi-sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01530
symbol: dut
gene_biotype: protein_coding
description:
  dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HMPREF9080_01533
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HMPREF9080_01534
symbol: EHM53878.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: fps:FP2256 0.00013 bifunctional exporter/1-acyl-sn-glycerol-3-phosphate acyltransferase precursor; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01535
symbol: EHM53879.1
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; KEGG: pen:PSEEN0351 1.2e-114 oxidoreductase protein K00540; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01537
symbol: EHM53881.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; KEGG: eic:NT01EI_3741 6.7e-68 glutathione reductase K00383; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01538
symbol: EHM53882.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tmz:Tmz1t_2516 1.8e-22 glutathione-disulfide reductase; K00383 glutathione reductase (NADPH).


ensembl_gene_id: HMPREF9080_01540
symbol: EHM53884.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cci:CC1G_15535 1.1e-09 Setd1a protein; K11422 histone-lysine N-methyltransferase SETD1.


ensembl_gene_id: HMPREF9080_01542
symbol: EHM53886.1
gene_biotype: protein_coding
description:
  Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 1.5e-12 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01549
symbol: EHM53890.1
gene_biotype: protein_coding
description:
  O-methyltransferase; KEGG: fnu:FN0388 2.5e-36 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01550
symbol: EHM53891.1
gene_biotype: protein_coding
description:
  Transporter gate domain protein; Psort location: CytoplasmicMembrane, score: 9.46; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01551
symbol: EHM53892.1
gene_biotype: protein_coding
description:
  Transporter gate domain protein; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01552
symbol: EHM53893.1
gene_biotype: protein_coding
description:
  Peptidase dimerization domain protein; KEGG: dno:DNO_0697 6.1e-129 M20 family peptidase; K01295 glutamate carboxypeptidase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01553
symbol: EHM53894.1
gene_biotype: protein_coding
description:
  Putative mevalonate kinase; KEGG: dno:DNO_0489 1.1e-67 GHMP kinase family protein; K00869 mevalonate kinase.


ensembl_gene_id: HMPREF9080_01554
symbol: EHM53895.1
gene_biotype: protein_coding
description:
  DNA-binding helix-turn-helix protein; KEGG: eba:ebA2762 0.0049 boxR; anaerobic benzoate catabolism transcriptional regulator; K00891 shikimate kinase.


ensembl_gene_id: HMPREF9080_01564
symbol: EHM53854.1
gene_biotype: protein_coding
description:
  KEGG: xfn:XfasM23_2177 0. N-6 DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01565
symbol: EHM53855.1
gene_biotype: protein_coding
description:
  KEGG: xfa:XF2722 1.4e-124 type I restriction-modification system specificity determinant; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01566
symbol: EHM53856.1
gene_biotype: protein_coding
description:
  KEGG: xfa:XF2721 0. type I restriction-modification system endonuclease; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01568
symbol: EHM53828.1
gene_biotype: protein_coding
description:
  Topoisomerase DNA-binding C4 zinc finger domain protein; KEGG: etr:ETAE_p016 6.8e-23 topA; DNA topoisomerase; K03168 DNA topoisomerase I.


ensembl_gene_id: HMPREF9080_01571
symbol: EHM53761.1
gene_biotype: protein_coding
description:
  Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: yen:YE1389 3.1e-28 putative serine protease; Psort location: Extracellular, score: 10.00.


ensembl_gene_id: HMPREF9080_01573
symbol: EHM53763.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: phu:Phum_PHUM411750 3.4e-05 WD-repeat protein, putative K12602; Psort location: Extracellular, score: 9.65.


ensembl_gene_id: HMPREF9080_01576
symbol: EHM53766.1
gene_biotype: protein_coding
description:
  GDSL-like protein; KEGG: nmi:NMO_1492 4.9e-49 putative periplasmic lipase; Psort location: Periplasmic, score: 9.44.


ensembl_gene_id: HMPREF9080_01581
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: HMPREF9080_01582
symbol: EHM53772.1
gene_biotype: protein_coding
description:
  TIGR00255 family protein; KEGG: ank:AnaeK_3296 0.0043 glycosyltransferase 36; K13688 cyclic beta-1,2-glucan synthetase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01583
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: HMPREF9080_01584
symbol: EHM53774.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cco:CCC13826_1017 3.4e-25 glycyl-tRNA synthetase alpha chain (glycine--tRNA ligasealpha chain; GlyRS).


ensembl_gene_id: HMPREF9080_01585
symbol: EHM53775.1
gene_biotype: protein_coding
description:
  KEGG: cch:Cag_1938 1.3e-34 Sel1 repeat-containing protein K07126; Psort location: Extracellular, score: 9.72.


ensembl_gene_id: HMPREF9080_01587
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: HMPREF9080_01588
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF9080_01589
symbol: EHM53779.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: HMPREF9080_01590
symbol: EHM53780.1
gene_biotype: protein_coding
description:
  Sel1 repeat protein; KEGG: mct:MCR_0405 4.5e-23 tetratricopeptide repeat family protein K07126; Psort location: Extracellular, score: 9.72.


ensembl_gene_id: HMPREF9080_01591
symbol: EHM53781.1
gene_biotype: protein_coding
description:
  Flavodoxin-like protein; KEGG: cco:CCC13826_1907 8.9e-34 general stress protein 14 (GSP14); Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01592
symbol: EHM53782.1
gene_biotype: protein_coding
description:
  Cof-like hydrolase; KEGG: smb:smi_1520 1.0e-32 predicted hydrolases of the HAD superfamily; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B); Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01593
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: HMPREF9080_01594
symbol: EHM53784.1
gene_biotype: protein_coding
description:
  ATP-binding cassette protein, ChvD family; KEGG: pen:PSEEN0810 2.9e-218 putative ABC transporter ATP-binding protein K01552; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01598
symbol: EHM53788.1
gene_biotype: protein_coding
description:
  Bile acid transporter; KEGG: soz:Spy49_0933 0.00044 oxaloacetate decarboxylase beta chain K01572; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01599
symbol: EHM53789.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cco:CCC13826_1380 3.3e-20 thioredoxin reductase (TrxR); Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01600
symbol: msrB
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMPREF9080_01601
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: HMPREF9080_01602
symbol: EHM53792.1
gene_biotype: protein_coding
description:
  L-fucose:H+ symporter permease; KEGG: gdj:Gdia_1396 1.1e-20 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01603
symbol: EHM53793.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rsq:Rsph17025_3351 5.2e-61 monosaccharide-transporting ATPase K10820; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01604
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: HMPREF9080_01605
symbol: EHM53795.1
gene_biotype: protein_coding
description:
  Putative deoxyribonucleoside regulator; KEGG: rlg:Rleg_1403 1.6e-35 glycerone kinase K05878; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01609
symbol: EHM53799.1
gene_biotype: protein_coding
description:
  Antioxidant, AhpC/TSA family; KEGG: reh:H16_A0306 7.1e-09 bcp; peroxiredoxin; Psort location: Periplasmic, score: 9.83.


ensembl_gene_id: HMPREF9080_01610
symbol: recF
gene_biotype: protein_coding
description:
  Putative DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: HMPREF9080_01611
symbol: EHM53801.1
gene_biotype: protein_coding
description:
  Magnesium chelatase, subunit ChlI; KEGG: rru:Rru_A3589 2.6e-34 Mg chelatase-related protein K07391; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01612
symbol: EHM53802.1
gene_biotype: protein_coding
description:
  YbaK/EbsC protein; KEGG: ent:Ent638_0960 4.4e-16 hypothetical protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: HMPREF9080_01613
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMPREF9080_01615
symbol: EHM53805.1
gene_biotype: protein_coding
description:
  Tat pathway signal sequence domain protein; KEGG: rba:RB1639 4.6e-53 monooxygenase K00492; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01616
symbol: speE
gene_biotype: protein_coding
description:
  Spermine/spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: HMPREF9080_01617
symbol: EHM53807.1
gene_biotype: protein_coding
description:
  Putative glycerate dehydrogenase; KEGG: par:Psyc_1987 4.4e-96 D-isomer specific 2-hydroxyacid dehydrogenase; K00018 glycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01624
symbol: EHM53814.1
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; KEGG: vfi:VF_A0365 3.7e-19 translation initiation inhibitor; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01625
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: HMPREF9080_01626
symbol: EHM53816.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bmq:BMQ_1760 0.00086 transglycosylase associated protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01627
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: HMPREF9080_01628
symbol: xerC
gene_biotype: protein_coding
description:
  Phage integrase, SAM-like domain protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF9080_01630
symbol: EHM53820.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: syg:sync_1129 0.0045 type I secretion target GGXGXDXXX repeat-containing protein K01175.


ensembl_gene_id: HMPREF9080_01637
symbol: EHM53724.1
gene_biotype: protein_coding
description:
  Putative fimbrial protein; Psort location: Extracellular, score: 10.00; Belongs to the N-Me-Phe pilin family.


ensembl_gene_id: HMPREF9080_01641
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF9080_01642
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMPREF9080_01645
symbol: EHM53675.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bsb:Bresu_0610 0.0049 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01647
symbol: EHM53677.1
gene_biotype: protein_coding
description:
  NnrS protein; KEGG: mct:MCR_1420 9.6e-108 NnrS family protein K07234; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01648
symbol: EHM53678.1
gene_biotype: protein_coding
description:
  Transporter, anaerobic C4-dicarboxylate uptake family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.


ensembl_gene_id: HMPREF9080_01649
symbol: gltS
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: HMPREF9080_01651
symbol: EHM53681.1
gene_biotype: protein_coding
description:
  Putative chaperone protein HscC; KEGG: dac:Daci_3774 2.9e-147 2-alkenal reductase K04045; Psort location: Cytoplasmic, score: 9.97; Belongs to the heat shock protein 70 family.


ensembl_gene_id: HMPREF9080_01652
symbol: EHM53682.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bmd:BMD_0202 0.00020 sulfatase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01653
symbol: EHM53683.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nmn:NMCC_1153 1.3e-15 P-type cation-transporting ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01654
symbol: EHM53684.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: kfl:Kfla_0407 2.0e-06 DNA polymerase III, subunits gamma and tau K02343; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01655
symbol: EHM53685.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; KEGG: nma:NMA2203 1.6e-185 purB; adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01659
symbol: EHM53689.1
gene_biotype: protein_coding
description:
  KEGG: nmc:NMC1451 2.1e-41 putative peptidyl-prolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01660
symbol: EHM53690.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: HMPREF9080_01661
symbol: zapD
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: HMPREF9080_01662
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: HMPREF9080_01663
symbol: EHM53693.1
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; KEGG: dno:DNO_0648 2.5e-68 ispA; geranyltranstransferase K00795; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: HMPREF9080_01664
symbol: EHM53694.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: HMPREF9080_01667
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF9080_01669
symbol: EHM53698.1
gene_biotype: protein_coding
description:
  YGGT family protein; KEGG: apb:SAR116_1874 0.0011 protein of unknown function YGGT K02221; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01671
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMPREF9080_01672
symbol: EHM53701.1
gene_biotype: protein_coding
description:
  Twitching mobility protein; KEGG: apb:SAR116_2526 4.0e-77 type II secretion PilT K02669; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01674
symbol: EHM53703.1
gene_biotype: protein_coding
description:
  Twitching motility protein; KEGG: apb:SAR116_2526 1.8e-49 type II secretion PilT K02669; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01675
symbol: EHM53704.1
gene_biotype: protein_coding
description:
  Topoisomerase DNA-binding C4 zinc finger domain protein; KEGG: bvi:Bcep1808_2123 0.00092 DNA topoisomerase III K03169.


ensembl_gene_id: HMPREF9080_01676
symbol: EHM53705.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0677 1.5e-118 parE; DNA topoisomerase IV subunit B K02622; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01677
symbol: EHM53706.1
gene_biotype: protein_coding
description:
  KEGG: pin:Ping_3354 7.5e-69 DNA topoisomerase IV subunit B K02622; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01681
symbol: EHM53603.1
gene_biotype: protein_coding
description:
  Glucitol/sorbitol permease IIC component; KEGG: eam:EAMY_3076 3.4e-80 srlA; PTS system, glucitol/sorbitol-specific IIBC component K02783; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01682
symbol: EHM53604.1
gene_biotype: protein_coding
description:
  KEGG: pmu:PM1970 1.6e-139 hypothetical protein; K02782 PTS system, glucitol/sorbitol-specific IIB component K02783; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01683
symbol: EHM53605.1
gene_biotype: protein_coding
description:
  PTS system, glucitol/sorbitol-specific, IIA component; KEGG: eoh:ECO103_3239 5.4e-27 srlB; PTS system glucitol/sorbitol-specific transporter subunit IIA; K02781 PTS system, glucitol/sorbitol-specific IIA component.


ensembl_gene_id: HMPREF9080_01684
symbol: EHM53606.1
gene_biotype: protein_coding
description:
  KEGG: asu:Asuc_0437 3.4e-105 sorbitol-6-phosphate dehydrogenase; K00068 sorbitol-6-phosphate 2-dehydrogenase; Psort location: Cytoplasmic, score: 9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9080_01685
symbol: EHM53607.1
gene_biotype: protein_coding
description:
  Aldehyde-alcohol dehydrogenase 2; KEGG: ssv:SSU98_0275 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: HMPREF9080_01687
symbol: EHM53609.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; KEGG: hip:CGSHiEE_02055 5.0e-24 fucI; L-fucose isomerase K02430; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01690
symbol: grpE
gene_biotype: protein_coding
description:
  Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]


ensembl_gene_id: HMPREF9080_01692
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: HMPREF9080_01693
symbol: EHM53615.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0074 2.7e-112 enoyl-[acyl-carrier-protein] reductase K00208; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_01694
symbol: kptA
gene_biotype: protein_coding
description:
  RNA 2'-phosphotransferase-like protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: HMPREF9080_01697
symbol: EHM53619.1
gene_biotype: protein_coding
description:
  Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 1.5e-05 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01698
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: HMPREF9080_01699
symbol: EHM53621.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0863 2.4e-70 metF; 5,10-methylenetetrahydrofolate reductase K00297; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01700
symbol: rhlB
gene_biotype: protein_coding
description:
  Putative ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: HMPREF9080_01702
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMPREF9080_01703
symbol: EHM53625.1
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF9080_01704
symbol: EHM53574.1
gene_biotype: protein_coding
description:
  Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 4.3e-25 ribonuclease UK114 K01175; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01705
symbol: EHM53575.1
gene_biotype: protein_coding
description:
  Isochorismatase family protein; KEGG: zpr:ZPR_0157 9.5e-53 bifunctional pyrazinamidase/nicotinamidase; K08281 nicotinamidase/pyrazinamidase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01707
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; KEGG: dno:DNO_0938 2.8e-181 lysS; lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9080_01708
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF9080_01709
symbol: EHM53579.1
gene_biotype: protein_coding
description:
  Flavodoxin-like protein; KEGG: ppy:PPE_00661 2.2e-23 putative NAD(P)H oxidoreductase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01710
symbol: EHM53580.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, Fur family; KEGG: ctu:Ctu_37690 5.0e-24 zur; zinc uptake transcriptional repressor K09823; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.


ensembl_gene_id: HMPREF9080_01711
symbol: EHM53581.1
gene_biotype: protein_coding
description:
  Putative phospholipid N-methyltransferase PmtA; KEGG: rpe:RPE_0347 4.3e-18 ribosomal RNA adenine methylase transferase; K00551 phosphatidylethanolamine N-methyltransferase.


ensembl_gene_id: HMPREF9080_01712
symbol: EHM53582.1
gene_biotype: protein_coding
description:
  Putative Bkd operon transcriptional regulator; KEGG: apb:SAR116_2220 1.7e-21 transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01713
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: HMPREF9080_01714
symbol: EHM53584.1
gene_biotype: protein_coding
description:
  comEA protein; KEGG: hor:Hore_06940 1.4e-07 glycogen/starch synthase, ADP-glucose type K00703; Psort location: CytoplasmicMembrane, score: 9.99.


ensembl_gene_id: HMPREF9080_01715
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF9080_01722
symbol: EHM53492.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rmr:Rmar_0501 0.00073 mannosyl-3-phosphoglycerate phosphatase; K07026 mannosyl-3-phosphoglycerate phosphatase.


ensembl_gene_id: HMPREF9080_01726
symbol: EHM53491.1
gene_biotype: protein_coding
description:
  Putative multidrug transporter EmrE; KEGG: cco:CCC13826_0782 1.1e-05 methionyl-tRNA formyltransferase K11741; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01741
symbol: EHM53383.1
gene_biotype: protein_coding
description:
  Nuclease-like protein; KEGG: xne:XNC1_p0177 4.0e-31 SNase-like nuclease; Psort location: Periplasmic, score: 9.84.


ensembl_gene_id: HMPREF9080_01760
symbol: EHM53402.1
gene_biotype: protein_coding
description:
  Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 1.1e-17 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01762
symbol: EHM53404.1
gene_biotype: protein_coding
description:
  Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 7.1e-25 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01765
symbol: EHM53407.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_1288 3.7e-12 resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01769
symbol: vapC
gene_biotype: protein_coding
description:
  PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: HMPREF9080_01789
symbol: EHM53368.1
gene_biotype: protein_coding
description:
  Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1514 2.7e-25 probable site-specific integrase/recombinase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.


ensembl_gene_id: HMPREF9080_01798
symbol: EHM53334.1
gene_biotype: protein_coding
description:
  Integrating conjugative element protein, PFL_4704 family; KEGG: rha:RHA1_ro07156 0.0064 rpoZ; DNA-directed RNA polymerase omega subunit K03060.


ensembl_gene_id: HMPREF9080_01804
symbol: EHM53340.1
gene_biotype: protein_coding
description:
  Integrating conjugative element membrane protein, PFL_4697 family; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01806
symbol: EHM53342.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; KEGG: dsh:Dshi_1605 1.0e-23 lytic murein transglycosylase; Psort location: Periplasmic, score: 9.76; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01807
symbol: EHM53343.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; KEGG: cvi:CV_2611 4.4e-32 slt; peptidoglycan N-acetylmuramoylhydrolase K01185; Psort location: Periplasmic, score: 9.76; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01809
symbol: EHM53345.1
gene_biotype: protein_coding
description:
  Integrating conjugative element protein PilL, PFGI-1 class; KEGG: hoh:Hoch_4960 3.5e-08 ribonuclease R K12573.


ensembl_gene_id: HMPREF9080_01811
symbol: EHM53284.1
gene_biotype: protein_coding
description:
  Putative integrating conjugative element relaxase, PFGI-1 class; KEGG: cwo:Cwoe_5293 6.9e-07 DNA polymerase III, subunits gamma and tau K02343; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01813
symbol: EHM53286.1
gene_biotype: protein_coding
description:
  Transporter, major facilitator family protein; KEGG: azo:azo0148 6.6e-132 putative acyltransferase family protein K00680; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01816
symbol: EHM53289.1
gene_biotype: protein_coding
description:
  Isochorismatase family protein; KEGG: dze:Dd1591_1230 6.4e-47 isochorismatase hydrolase; K05993 isochorismatase.


ensembl_gene_id: HMPREF9080_01818
symbol: EHM53291.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase family protein; KEGG: dno:DNO_0388 1.5e-15 hypothetical protein; K08296 phosphohistidine phosphatase.


ensembl_gene_id: HMPREF9080_01821
symbol: EHM53294.1
gene_biotype: protein_coding
description:
  ATPase family protein; KEGG: efe:EFER_3105 6.3e-88 putative 5-methylcytosine-specific restriction enzyme with GTPase activity; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_01822
symbol: EHM53295.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0324 2.8e-69 dnaB; replicative DNA helicase K02314; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01823
symbol: EHM53296.1
gene_biotype: protein_coding
description:
  UbiC transcription regulator-associated domain protein; KEGG: mtc:MT0817 3.5e-14 mercuric reductase/transcriptional regulator, fusion; K00382 dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01824
symbol: EHM53297.1
gene_biotype: protein_coding
description:
  Putative 2-keto-3-deoxygluconate transporter; KEGG: pth:PTH_0191 0.0044 hypothetical protein; K06382 stage II sporulation protein E; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01825
symbol: EHM53298.1
gene_biotype: protein_coding
description:
  YgbK domain protein; KEGG: bgl:bglu_2g15180 2.5e-41 probable pyrodoxal phosphate biosynthesis protein; K00097 4-hydroxythreonine-4-phosphate dehydrogenase.


ensembl_gene_id: HMPREF9080_01826
symbol: EHM53299.1
gene_biotype: protein_coding
description:
  KEGG: bav:BAV0651 7.0e-121 pdxA1; 4-hydroxythreonine-4-phosphate dehydrogenase K00097; Psort location: Cytoplasmic, score: 9.97; Belongs to the PdxA family.


ensembl_gene_id: HMPREF9080_01828
symbol: EHM53301.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pol:Bpro_4551 1.9e-25 methylitaconate delta2-delta3-isomerase K09788; Psort location: Periplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_01829
symbol: EHM53302.1
gene_biotype: protein_coding
description:
  Membrane protein; KEGG: apb:SAR116_1210 2.4e-86 integral membrane protein, putative K07793; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01830
symbol: EHM53303.1
gene_biotype: protein_coding
description:
  Putative dihydrodipicolinate synthase; KEGG: smd:Smed_3989 1.1e-113 dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.26; Belongs to the DapA family.


ensembl_gene_id: HMPREF9080_01832
symbol: EHM53305.1
gene_biotype: protein_coding
description:
  4-phosphoerythronate dehydrogenase; KEGG: rsp:RSP_3407 3.8e-33 serA; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding subunit; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01833
symbol: EHM53306.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase, iron-dependent; KEGG: azl:AZL_b03380 2.4e-104 adh; alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01835
symbol: EHM53308.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: eca:ECA2191 4.4e-08 hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493.


ensembl_gene_id: HMPREF9080_01839
symbol: EHM53312.1
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding domain protein; KEGG: eci:UTI89_C3860 8.8e-08 crp; cAMP-regulatory protein K10914; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01846
symbol: EHM53224.1
gene_biotype: protein_coding
description:
  Putative membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: HMPREF9080_01847
symbol: queF
gene_biotype: protein_coding
description:
  preQ(1) synthase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: HMPREF9080_01848
symbol: dapD
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0817 2.4e-111 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674; Psort location: Cytoplasmic, score: 9.97; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: HMPREF9080_01849
symbol: nhaA
gene_biotype: protein_coding
description:
  Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: HMPREF9080_01850
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HMPREF9080_01851
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMPREF9080_01852
symbol: EHM53230.1
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMPREF9080_01854
symbol: nqrA
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: HMPREF9080_01855
symbol: nqrB
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, B subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: HMPREF9080_01856
symbol: nqrC
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: HMPREF9080_01857
symbol: nqrD
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, D subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: HMPREF9080_01858
symbol: nqrE
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, E subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: HMPREF9080_01859
symbol: nqrF
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, F subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: HMPREF9080_01860
symbol: EHM53237.1
gene_biotype: protein_coding
description:
  Putative thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: HMPREF9080_01867
symbol: EHM53184.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; KEGG: sro:Sros_9315 0.0012 DNA-directed DNA polymerase K02343; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01868
symbol: EHM53185.1
gene_biotype: protein_coding
description:
  Mannose permease IID component; KEGG: ddd:Dda3937_04593 4.2e-91 manZ, gptB, mpt, ptsM, ptsX; PTS system mannose-specific transporter subunit IIC K02796; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01869
symbol: EHM53186.1
gene_biotype: protein_coding
description:
  Mannose permease IIC component; KEGG: lsg:lse_0681 8.4e-77 PTS system, mannose/fructose/sorbose family, IIC component K02795; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01870
symbol: EHM53187.1
gene_biotype: protein_coding
description:
  Putative PTS system mannose-specific EIIAB component; KEGG: asu:Asuc_0286 1.2e-91 PTS system mannose/fructose/sorbose family IIA subunit; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01871
symbol: mtnN
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMPREF9080_01872
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF9080_01873
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF9080_01876
symbol: EHM53193.1
gene_biotype: protein_coding
description:
  Putative periplasmic oligopeptide-binding protein; KEGG: bac:BamMC406_5413 6.2e-97 4-phytase K02035; Psort location: Periplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_01877
symbol: EHM53194.1
gene_biotype: protein_coding
description:
  Oligopeptide transport system permease protein OppB; KEGG: rsq:Rsph17025_2889 1.4e-90 alkaline phosphatase K02033; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01878
symbol: EHM53195.1
gene_biotype: protein_coding
description:
  KEGG: bra:BRADO1095 3.5e-46 oppC; oligopeptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01879
symbol: EHM53196.1
gene_biotype: protein_coding
description:
  Putative phosphonate C-P lyase system protein PhnK; KEGG: rcp:RCAP_rcc02278 9.6e-140 oppD2; oligopeptide ABC transporter ATP-binding protein OppD; Psort location: CytoplasmicMembrane, score: 9.99.


ensembl_gene_id: HMPREF9080_01881
symbol: EHM53198.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: pol:Bpro_4551 6.3e-88 methylitaconate delta2-delta3-isomerase K09788; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01885
symbol: EHM53202.1
gene_biotype: protein_coding
description:
  KEGG: rlt:Rleg2_4805 6.9e-20 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01886
symbol: trmL
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 2; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: HMPREF9080_01887
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: HMPREF9080_01888
symbol: EHM53205.1
gene_biotype: protein_coding
description:
  KEGG: nmc:NMC1625 6.6e-196 gdhA; glutamate dehydrogenase K00262; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: HMPREF9080_01890
symbol: EHM53207.1
gene_biotype: protein_coding
description:
  ACT domain protein; KEGG: fpl:Ferp_0598 5.3e-07 phosphoserine phosphatase SerB K01079; Belongs to the UPF0237 family.


ensembl_gene_id: HMPREF9080_01894
symbol: EHM53211.1
gene_biotype: protein_coding
description:
  Sigma-54 interaction domain protein; KEGG: scl:sce2668 8.7e-37 protein kinase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01896
symbol: EHM53213.1
gene_biotype: protein_coding
description:
  Oxidoreductase, zinc-binding dehydrogenase family protein; KEGG: ddd:Dda3937_01587 3.2e-61 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein K13979.


ensembl_gene_id: HMPREF9080_01897
symbol: EHM53144.1
gene_biotype: protein_coding
description:
  Putative protein-P-II uridylyltransferase; KEGG: hha:Hhal_1468 5.7e-116 metal dependent phosphohydrolase K00990; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01899
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF9080_01900
symbol: rpsB
gene_biotype: protein_coding
description:
  Ribosomal protein S2; KEGG: apb:SAR116_0519 7.1e-64 ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: HMPREF9080_01901
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF9080_01904
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF9080_01905
symbol: uppS
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: HMPREF9080_01906
symbol: EHM53153.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0718 4.1e-12 cdsA; phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01907
symbol: EHM53154.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dno:DNO_0718 1.5e-15 cdsA; phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01908
symbol: EHM53155.1
gene_biotype: protein_coding
description:
  RIP metalloprotease RseP; KEGG: dno:DNO_0716 2.4e-118 M50 family zinc metalloprotease; K11749 regulator of sigma E protease; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01914
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMPREF9080_01916
symbol: EHM53163.1
gene_biotype: protein_coding
description:
  KEGG: noc:Noc_0720 1.1e-223 GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01921
symbol: EHM53168.1
gene_biotype: protein_coding
description:
  HAD hydrolase, family IA, variant 3; KEGG: msm:MSMEG_4183 6.8e-20 phosphoglycolate phosphatase, chromosomal; Psort location: Cytoplasmic, score: 9.26; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01923
symbol: EHM53170.1
gene_biotype: protein_coding
description:
  KEGG: ava:Ava_3074 2.0e-20 HAD family hydrolase K01838; Psort location: Cytoplasmic, score: 9.97; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_01924
symbol: EHM53171.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bme:BMEI1018 6.6e-22 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.


ensembl_gene_id: HMPREF9080_01925
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: HMPREF9080_01927
symbol: EHM53174.1
gene_biotype: protein_coding
description:
  2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: HMPREF9080_01928
symbol: EHM53175.1
gene_biotype: protein_coding
description:
  KEGG: ppd:Ppro_1998 3.9e-88 aminotransferase, class I and II; K14155 cystathione beta-lyase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01931
symbol: EHM53178.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; KEGG: etr:ETAE_0727 1.2e-59 truC; tRNA pseudouridine synthase C; K06175 tRNA pseudouridine synthase C; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01932
symbol: EHM53138.1
gene_biotype: protein_coding
description:
  Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: sde:Sde_2873 1.3e-20 poly(beta-D-mannuronate) lyase K01729; Psort location: Extracellular, score: 10.00.


ensembl_gene_id: HMPREF9080_01935
symbol: EHM53132.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HMPREF9080_01936
symbol: EHM53133.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase Cyp18 domain protein; KEGG: app:CAP2UW1_0508 1.6e-20 peptidylprolyl isomerase K03767; Psort location: Periplasmic, score: 9.44.


ensembl_gene_id: HMPREF9080_01943
symbol: EHM53030.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; KEGG: xal:XALc_0099 2.0e-75 probable exodeoxyribonuclease III protein K01142; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01944
symbol: EHM53031.1
gene_biotype: protein_coding
description:
  Putative 16S rRNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMPREF9080_01945
symbol: EHM53032.1
gene_biotype: protein_coding
description:
  ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dno:DNO_0434 1.5e-102 pilS; two-component sensor PilS; K02668 two-component system, NtrC family, sensor histidine kinase PilS; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01947
symbol: EHM53034.1
gene_biotype: protein_coding
description:
  Response regulator/sigma54 interaction protein; KEGG: eci:UTI89_C2502 4.2e-84 atoC; acetoacetate metabolism regulatory protein AtoC K07714; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01951
symbol: EHM53038.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bra:BRADO4879 7.3e-29 putative short-chain dehydrogenase/reductase (modular) K00044.


ensembl_gene_id: HMPREF9080_01954
symbol: EHM53041.1
gene_biotype: protein_coding
description:
  Transporter, major facilitator family protein; KEGG: hse:Hsero_0990 9.4e-46 mmr; methylenomycin A resistance protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01957
symbol: EHM53044.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, effector binding domain protein; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01959
symbol: EHM53046.1
gene_biotype: protein_coding
description:
  Methyltransferase domain protein; KEGG: fbl:Fbal_2824 7.1e-07 (protein release factor)-glutamine N5-methyltransferase.


ensembl_gene_id: HMPREF9080_01960
symbol: EHM53047.1
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: HMPREF9080_01961
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HMPREF9080_01962
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HMPREF9080_01963
symbol: EHM53050.1
gene_biotype: protein_coding
description:
  Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: HMPREF9080_01964
symbol: folD
gene_biotype: protein_coding
description:
  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF9080_01965
symbol: EHM53052.1
gene_biotype: protein_coding
description:
  Putative protein hit; KEGG: azo:azo1499 2.9e-28 HIT family protein K02503; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01970
symbol: EHM53057.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: osa:4324353 0.0028 Os01g0915400; hypothetical protein; K09667 polypeptide N-acetylglucosaminyltransferase.


ensembl_gene_id: HMPREF9080_01971
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: HMPREF9080_01975
symbol: EHM53062.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family 65 central catalytic domain protein; KEGG: nmc:NMC1777 0. mapA; maltose phosphorylase K00691.


ensembl_gene_id: HMPREF9080_01976
symbol: EHM53063.1
gene_biotype: protein_coding
description:
  Beta-phosphoglucomutase; KEGG: nma:NMA2093 3.2e-93 beta-phosphoglucomutase K01838; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01977
symbol: rpmE2
gene_biotype: protein_coding
description:
  Ribosomal protein L31; KEGG: apb:SAR116_2278 9.3e-07 ribosomal protein L31 K02909; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_01978
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: HMPREF9080_01979
symbol: EHM53066.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: dno:DNO_0899 3.7e-99 D-alanyl-D-alanine carboxypeptidase K07258; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S11 family.


ensembl_gene_id: HMPREF9080_01980
symbol: rlpA
gene_biotype: protein_coding
description:
  Putative rare lipoprotein A double-psi beta-barrel protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: HMPREF9080_01981
symbol: EHM53068.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0962 4.6e-92 membrane-bound lytic murein transglycosylase; K08305 membrane-bound lytic murein transglycosylase B; Psort location: CytoplasmicMembrane, score: 9.97.


ensembl_gene_id: HMPREF9080_01982
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: HMPREF9080_01983
symbol: EHM53070.1
gene_biotype: protein_coding
description:
  KEGG: nhl:Nhal_0571 4.5e-133 penicillin-binding protein 2 K05515; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_01984
symbol: EHM53071.1
gene_biotype: protein_coding
description:
  Putative rod shape-determining protein MreD; KEGG: cff:CFF8240_0725 0.0024 lnt; apolipoprotein N-acyltransferase K03820; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01986
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMPREF9080_01987
symbol: EHM53074.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0710 2.2e-94 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01988
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMPREF9080_01989
symbol: EHM53076.1
gene_biotype: protein_coding
description:
  Endonuclease/exonuclease/phosphatase family protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01990
symbol: EHM53077.1
gene_biotype: protein_coding
description:
  Endonuclease/exonuclease/phosphatase family protein; KEGG: eci:UTI89_C0791 8.4e-05 ybhP; putative DNase K06896; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01991
symbol: EHM53078.1
gene_biotype: protein_coding
description:
  Putative cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: HMPREF9080_01994
symbol: EHM53081.1
gene_biotype: protein_coding
description:
  KEGG: ssp:SSP0838 9.2e-71 putative fructokinase; K00847 fructokinase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_01995
symbol: EHM53082.1
gene_biotype: protein_coding
description:
  KEGG: eat:EAT1b_0191 7.1e-151 PTS system, sucrose-specific IIBC subunit; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_01998
symbol: EHM53085.1
gene_biotype: protein_coding
description:
  1-phosphofructokinase; KEGG: dno:DNO_0583 4.0e-86 1-phosphofructokinase; K00882 1-phosphofructokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: HMPREF9080_01999
symbol: EHM53086.1
gene_biotype: protein_coding
description:
  Hydrolase, alpha/beta domain protein; KEGG: hse:Hsero_1303 2.2e-23 catD; 3-ketoadipate enol-lactone hydrolase K01055; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02005
symbol: EHM53091.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2804 8.0e-72 ABC transporter component K02003; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02006
symbol: EHM53092.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: scl:sce7811 4.5e-11 xenobiotic reductase; K10680 N-ethylmaleimide reductase.


ensembl_gene_id: HMPREF9080_02008
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF9080_02012
symbol: EHM53098.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: fnu:FN1603 1.5e-11 2',3'-cyclic nucleotide 3'-phosphodiesterase K01121; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02026
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: HMPREF9080_02027
symbol: EHM52994.1
gene_biotype: protein_coding
description:
  KEGG: hap:HAPS_0291 1.7e-188 glgX; glycogen operon protein GlgX; K02438 glycogen operon protein GlgX; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: HMPREF9080_02028
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: HMPREF9080_02030
symbol: EHM52997.1
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; KEGG: dno:DNO_1051 1.2e-146 argS; arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9080_02032
symbol: EHM52999.1
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein AlgP domain protein; KEGG: pca:Pcar_2039 1.9e-10 rne; ribonuclease E; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02033
symbol: EHM53000.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_2179 1.5e-05 predicted permease K07090; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02034
symbol: EHM53001.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rcm:A1E_05435 0.0079 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase K07566; Psort location: Cytoplasmic, score: 8.96; Belongs to the SUA5 family.


ensembl_gene_id: HMPREF9080_02036
symbol: trpF
gene_biotype: protein_coding
description:
  KEGG: tgr:Tgr7_1252 5.4e-50 phosphoribosylanthranilate isomerase K01817; Belongs to the TrpF family.


ensembl_gene_id: HMPREF9080_02037
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: HMPREF9080_02038
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: HMPREF9080_02039
symbol: EHM53006.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0405 2.3e-67 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02040
symbol: EHM53007.1
gene_biotype: protein_coding
description:
  Putative protein FolC; KEGG: dno:DNO_0404 5.7e-110 folC; folylpolyglutamate synthase K11754; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02042
symbol: EHM53009.1
gene_biotype: protein_coding
description:
  CvpA family protein; KEGG: apb:SAR116_0650 2.5e-14 colicin V production protein K03558; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02043
symbol: EHM53010.1
gene_biotype: protein_coding
description:
  KEGG: bmj:BMULJ_03897 2.4e-95 metB; O-succinylhomoserine sulfhydrylase K10764; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02050
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: HMPREF9080_02051
symbol: EHM52950.1
gene_biotype: protein_coding
description:
  KEGG: dda:Dd703_2312 1.3e-30 S-formylglutathione hydrolase K01070; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02052
symbol: EHM52951.1
gene_biotype: protein_coding
description:
  KEGG: dsh:Dshi_2841 1.6e-18 putative ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02053
symbol: EHM52952.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bts:Btus_3126 0.00077 prepilin peptidase K02654; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02054
symbol: EHM52953.1
gene_biotype: protein_coding
description:
  KEGG: msu:MS1172 6.3e-72 gpmB; GpmB protein; K01834 phosphoglycerate mutase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02056
symbol: EHM52902.1
gene_biotype: protein_coding
description:
  Putative protein ExsB; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: HMPREF9080_02061
symbol: EHM52838.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; KEGG: dno:DNO_0633 8.3e-141 lytic murein transglycosylase K08309; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_02062
symbol: EHM52839.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; KEGG: sat:SYN_02783 9.4e-30 soluble lytic murein transglycosylase K01238; Psort location: Periplasmic, score: 9.76; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02063
symbol: EHM52840.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; KEGG: xca:xccb100_1847 1.1e-39 putative soluble lytic murein transglycosylase; Psort location: Periplasmic, score: 9.76; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02065
symbol: EHM52842.1
gene_biotype: protein_coding
description:
  Toxic anion resistance protein TelA; KEGG: isc:IscW_ISCW016446 2.6e-05 paramyosin, putative; Psort location: Cytoplasmic, score: 8.96; Belongs to the TelA family.


ensembl_gene_id: HMPREF9080_02067
symbol: EHM52844.1
gene_biotype: protein_coding
description:
  6-O-methylguanine DNA methyltransferase, DNA binding domain protein; KEGG: bfs:BF4111 4.7e-35 putative methylated-DNA--protein-cysteine methyltransferase K00567; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02069
symbol: EHM52846.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tkm:TK90_2461 2.8e-37 homoserine O-succinyltransferase K00651; Belongs to the MetA family.


ensembl_gene_id: HMPREF9080_02070
symbol: EHM52847.1
gene_biotype: protein_coding
description:
  Hydrolase, alpha/beta domain protein; KEGG: srm:SRM_01769 2.0e-20 gloA; lactoylglutathione lyase; Psort location: Periplasmic, score: 9.84.


ensembl_gene_id: HMPREF9080_02073
symbol: EHM52850.1
gene_biotype: protein_coding
description:
  Putative KHG/KDPG aldolase; KEGG: vvy:VVA1596 1.2e-70 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02074
symbol: EHM52851.1
gene_biotype: protein_coding
description:
  Kinase, PfkB family; KEGG: pin:Ping_0130 4.7e-83 2-dehydro-3-deoxygluconokinase; K00874 2-dehydro-3-deoxygluconokinase.


ensembl_gene_id: HMPREF9080_02078
symbol: EHM52855.1
gene_biotype: protein_coding
description:
  KEGG: asu:Asuc_0371 1.5e-173 mannitol dehydrogenase domain-containing protein; K00040 fructuronate reductase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02086
symbol: EHM52781.1
gene_biotype: protein_coding
description:
  Flavodoxin-like protein; KEGG: tde:TDE0354 6.4e-63 general stress protein 14; K00358; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02087
symbol: EHM52782.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bbt:BBta_5035 3.5e-62 putative esterase/lipase K01046; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_02095
symbol: EHM52790.1
gene_biotype: protein_coding
description:
  Arginine 2-monooxygenase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: HMPREF9080_02097
symbol: EHM52792.1
gene_biotype: protein_coding
description:
  Glutaredoxin, GrxB family; KEGG: eci:UTI89_C1189 3.4e-48 grxB; glutaredoxin 2 K03675; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02099
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: HMPREF9080_02103
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: HMPREF9080_02104
symbol: EHM52799.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0679 2.0e-68 choline-carnitine O-acyltransferase family protein; K00624 carnitine O-acetyltransferase.


ensembl_gene_id: HMPREF9080_02107
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: HMPREF9080_02108
symbol: pyrB
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0490 1.4e-131 pyrB; aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF9080_02109
symbol: EHM52804.1
gene_biotype: protein_coding
description:
  KEGG: ctu:Ctu_31430 5.7e-39 glnB; nitrogen regulatory protein P-II 1 K04751; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the P(II) protein family.


ensembl_gene_id: HMPREF9080_02110
symbol: EHM52805.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dpo:Dpse_GA10875 0.00031 GA10875 gene product from transcript GA10875-RA; K03514 DNA polymerase sigma subunit; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_02112
symbol: EHM52807.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hip:CGSHiEE_07500 4.5e-09 thyA; thymidylate synthase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02113
symbol: EHM52808.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: spu:580319 0.0085 similar to androgen receptor associated protein 54; K11971 E3 ubiquitin-protein ligase RNF14.


ensembl_gene_id: HMPREF9080_02115
symbol: EHM52810.1
gene_biotype: protein_coding
description:
  KEGG: hha:Hhal_2290 1.8e-65 isocitrate dehydrogenase, NADP-dependent K00031; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02116
symbol: EHM52811.1
gene_biotype: protein_coding
description:
  KEGG: bpa:BPP3972 2.4e-86 putative amino acid ABC transporter ATP-binding protein; K09972 general L-amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.


ensembl_gene_id: HMPREF9080_02117
symbol: EHM52812.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0449 1.5e-79 ABC-type amino acid transport system, permease component K09971; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02118
symbol: EHM52813.1
gene_biotype: protein_coding
description:
  Putative general L-amino acid transport system permease protein AapQ; KEGG: apb:SAR116_0450 3.0e-72 glutamate/glutamine/aspartate/asparagine transport system permease protein K09970; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02120
symbol: EHM52815.1
gene_biotype: protein_coding
description:
  acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: hse:Hsero_3710 3.8e-26 4-hydroxybenzoyl-CoA thioesterase K07107.


ensembl_gene_id: HMPREF9080_02121
symbol: EHM52816.1
gene_biotype: protein_coding
description:
  Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; KEGG: cco:CCC13826_2177 4.3e-41 glycosyl transferase, group 2 family protein.


ensembl_gene_id: HMPREF9080_02123
symbol: EHM52818.1
gene_biotype: protein_coding
description:
  AMP-binding domain protein; KEGG: ccv:CCV52592_0971 2.9e-44 3-phosphoshikimate 1-carboxyvinyltransferase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02124
symbol: EHM52819.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: vfi:VF_0848 1.5e-24 DNA gyrase subunit B; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02126
symbol: EHM52821.1
gene_biotype: protein_coding
description:
  KEGG: hpa:HPAG1_0538 0.00042 acpP; acyl carrier protein K02078; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02127
symbol: EHM52822.1
gene_biotype: protein_coding
description:
  Acyl carrier family protein; KEGG: tml:GSTUM_00003784001 0.0014 hypothetical protein; K03955 NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1.


ensembl_gene_id: HMPREF9080_02128
symbol: EHM52823.1
gene_biotype: protein_coding
description:
  Acyltransferase; KEGG: bpt:Bpet4374 5.7e-55 putative acyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_02130
symbol: EHM52825.1
gene_biotype: protein_coding
description:
  Nitrite reductase, copper-dependent; KEGG: pen:PSEEN5226 1.1e-122 copper-containing nitrite reductase (NO-forming) K00368; Psort location: Periplasmic, score: 10.00; Belongs to the multicopper oxidase family.


ensembl_gene_id: HMPREF9080_02134
symbol: EHM52829.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase accessory protein CcoG; KEGG: sun:SUN_0301 3.0e-05 napH; quinol dehydrogenase membrane component K02574; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02143
symbol: EHM52733.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter family protein; KEGG: mct:MCR_0505 1.2e-18 amino acid transport protein K03310; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02144
symbol: EHM52734.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter family protein; KEGG: mct:MCR_0505 1.1e-24 amino acid transport protein K03310; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02146
symbol: EHM52736.1
gene_biotype: protein_coding
description:
  KEGG: hha:Hhal_0125 4.1e-84 homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02147
symbol: EHM52737.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0592 1.1e-147 recJ; DNA exonuclease RecJ K07462; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02148
symbol: EHM52738.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rcm:A1E_05090 5.0e-08 NADH dehydrogenase subunit G; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02150
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: HMPREF9080_02154
symbol: EHM52744.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0646 8.3e-70 chorismate binding family protein; K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02156
symbol: EHM52746.1
gene_biotype: protein_coding
description:
  Putative membrane protein; KEGG: zmo:ZMO1971 3.2e-16 panC; pantoate--beta-alanine ligase; K01918 pantoate--beta-alanine ligase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02157
symbol: EHM52747.1
gene_biotype: protein_coding
description:
  DNA-binding regulatory protein, YebC/PmpR family; KEGG: zmo:ZMO0153 1.5e-45 hypothetical protein; K00975 glucose-1-phosphate adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02158
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: HMPREF9080_02159
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF9080_02160
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF9080_02161
symbol: EHM52751.1
gene_biotype: protein_coding
description:
  Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: hip:CGSHiEE_01075 1.5e-24 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02163
symbol: tolR
gene_biotype: protein_coding
description:
  Putative protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: HMPREF9080_02164
symbol: EHM52754.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sco:SCO3542 4.2e-21 SCH5.05c; integral membrane protein with kinase activity; K00943 dTMP kinase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02166
symbol: EHM52611.1
gene_biotype: protein_coding
description:
  TonB family domain protein; KEGG: mxa:MXAN_4460 6.2e-17 valS; valyl-tRNA synthetase K01873; Psort location: OuterMembrane, score: 9.92; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02167
symbol: EHM52612.1
gene_biotype: protein_coding
description:
  TonB family domain protein; KEGG: sth:STH87 0.0013 ATP synthase B subunit; K02109 F-type H+-transporting ATPase subunit b; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02168
symbol: tolB
gene_biotype: protein_coding
description:
  Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: HMPREF9080_02169
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: HMPREF9080_02172
symbol: EHM52617.1
gene_biotype: protein_coding
description:
  Sodium:neurotransmitter symporter family protein; KEGG: hip:CGSHiEE_08435 1.9e-47 dihydroxy-acid dehydratase K03308; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: HMPREF9080_02173
symbol: EHM52618.1
gene_biotype: protein_coding
description:
  L-lysine exporter; KEGG: apb:SAR116_2494 2.5e-13 transporter, LysE family K06895; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02174
symbol: EHM52619.1
gene_biotype: protein_coding
description:
  Divalent cation tolerance protein, CutA1 family; KEGG: cff:CFF8240_1082 1.1e-07 threonine synthase K01733; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02176
symbol: EHM52621.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulatory protein afsQ1; KEGG: eci:UTI89_C2354 4.6e-37 baeR; DNA-binding transcriptional regulator BaeR K07664; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02180
symbol: EHM52625.1
gene_biotype: protein_coding
description:
  DNA-binding helix-turn-helix protein; KEGG: dac:Daci_0075 6.6e-05 anaerobic benzoate catabolism transcriptional regulator K00891; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02181
symbol: EHM52626.1
gene_biotype: protein_coding
description:
  HTH domain protein; KEGG: cco:CCC13826_0826 8.7e-08 aspA; aspartate ammonia-lyase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02183
symbol: EHM52628.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: fnu:FN0522 1.3e-11 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02184
symbol: EHM52629.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tva:TVAG_387410 0.00015 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02188
symbol: EHM52633.1
gene_biotype: protein_coding
description:
  Tannase and feruloyl esterase; KEGG: msu:MS2241 4.3e-160 hypothetical protein; K09252 feruloyl esterase; Psort location: Periplasmic, score: 9.84.


ensembl_gene_id: HMPREF9080_02189
symbol: EHM52634.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dze:Dd1591_2088 9.6e-21 phenolic acid decarboxylase; K13727 phenolic acid decarboxylase.


ensembl_gene_id: HMPREF9080_02191
symbol: EHM52636.1
gene_biotype: protein_coding
description:
  LysR substrate binding domain protein; KEGG: kko:Kkor_1239 8.1e-40 transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF9080_02192
symbol: EHM52637.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: HMPREF9080_02194
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; KEGG: dno:DNO_0940 1.8e-131 purD; phosphoribosylglycinamide synthetase K01945; Psort location: Cytoplasmic, score: 9.97; Belongs to the GARS family.


ensembl_gene_id: HMPREF9080_02195
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HMPREF9080_02202
symbol: EHM52647.1
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; KEGG: azo:azo1826 1.5e-38 NADH dehydrogenase (ubiquinone).


ensembl_gene_id: HMPREF9080_02206
symbol: EHM52651.1
gene_biotype: protein_coding
description:
  Potassium/proton antiporter; KEGG: ddd:Dda3937_02262 2.8e-10 yjcE; putative cation/proton antiporter K03316; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02207
symbol: EHM52652.1
gene_biotype: protein_coding
description:
  Putative membrane protein; KEGG: sna:Snas_0956 3.9e-15 peptide methionine sulfoxide reductase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02208
symbol: EHM52653.1
gene_biotype: protein_coding
description:
  lysine--tRNA ligase-like protein GenX; KEGG: dno:DNO_0604 2.5e-93 lysyl-RNA synthetase; K04568 lysyl-tRNA synthetase, class II; Psort location: Cytoplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_02209
symbol: EHM52654.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1029 2.1e-34 fumarate reductase, subunit D K00247; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02210
symbol: EHM52655.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1028 1.7e-37 frdC; fumarate reductase, subunit C K00246; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02211
symbol: EHM52656.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1027 3.8e-104 frdB; fumarate reductase, iron-sulfur protein K00245; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: HMPREF9080_02212
symbol: EHM52657.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1026 4.7e-257 frdA; fumarate reductase flavoprotein subunit K00244; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02217
symbol: EHM52662.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0057 1.9e-22 TRAP dicarboxylate transporter, DctP subunit; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_02218
symbol: EHM52663.1
gene_biotype: protein_coding
description:
  TRAP transporter, DctQ-like membrane protein; KEGG: psa:PST_2201 4.7e-05 hypothetical protein; K00851 gluconokinase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02219
symbol: EHM52664.1
gene_biotype: protein_coding
description:
  TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 6.0e-67 TRAP dicarboxylate transporter-DctM subunit; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02220
symbol: EHM52665.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase, family 31; KEGG: spe:Spro_3598 5.2e-251 alpha-glucosidase K01187; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: HMPREF9080_02226
symbol: EHM52671.1
gene_biotype: protein_coding
description:
  PAS domain S-box protein; KEGG: aeh:Mlg_2624 1.8e-97 multi-sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02227
symbol: EHM52672.1
gene_biotype: protein_coding
description:
  Putative nitrogen assimilation regulatory protein NtrX; KEGG: btr:Btr_0873 1.6e-64 two-component system, response regulator K13599; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02228
symbol: EHM52673.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rer:RER_02550 1.1e-25 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_02229
symbol: EHM52674.1
gene_biotype: protein_coding
description:
  Acetyltransferase, GNAT family; KEGG: bps:BPSL1438 1.8e-42 putative acetyltransferase; K03823 phosphinothricin acetyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_02230
symbol: EHM52675.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_2000 1.6e-27 drug resistance transporter, Bcr/CflA subfamily K07552; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02232
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: HMPREF9080_02233
symbol: EHM52678.1
gene_biotype: protein_coding
description:
  Putative CTP pyrophosphohydrolase; KEGG: vpa:VP0468 5.7e-23 mutator MutT protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase; Belongs to the Nudix hydrolase family.


ensembl_gene_id: HMPREF9080_02234
symbol: EHM52679.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ddi:DDB_G0269498 0.0037 hypothetical protein; K10639 E3 ubiquitin-protein ligase CCNP1IP1; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_02237
symbol: ybeY
gene_biotype: protein_coding
description:
  Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMPREF9080_02238
symbol: EHM52683.1
gene_biotype: protein_coding
description:
  PhoH-like protein; KEGG: ttu:TERTU_3875 2.0e-91 phosphate starvation-inducible protein PhoH family protein, predicted ATPase K06217; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02239
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: HMPREF9080_02240
symbol: EHM52685.1
gene_biotype: protein_coding
description:
  KEGG: asu:Asuc_0438 1.3e-32 fructose-6-phosphate aldolase; K08314 fructose-6-phosphate aldolase 2; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02242
symbol: EHM52687.1
gene_biotype: protein_coding
description:
  Sulfate permease; KEGG: ctu:Ctu_24280 1.8e-99 ychM; putative sulfate transporter YchM K03321; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02248
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF9080_02250
symbol: EHM52544.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0244 4.5e-46 holA; DNA polymerase III, delta subunit K02340; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02251
symbol: lptE
gene_biotype: protein_coding
description:
  Hypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.


ensembl_gene_id: HMPREF9080_02252
symbol: EHM52546.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mxa:MXAN_5299 5.1e-07 S9C family peptidase K01423; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02253
symbol: EHM52547.1
gene_biotype: protein_coding
description:
  Putative cyclase; KEGG: dbr:Deba_1497 1.5e-15 kynurenine formamidase K07130; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02254
symbol: EHM52548.1
gene_biotype: protein_coding
description:
  Hydrolase, alpha/beta domain protein; KEGG: vap:Vapar_5780 5.5e-112 hypothetical protein; K00641 homoserine O-acetyltransferase; Psort location: CytoplasmicMembrane, score: 9.76; Belongs to the AB hydrolase superfamily. MetX family.


ensembl_gene_id: HMPREF9080_02255
symbol: EHM52549.1
gene_biotype: protein_coding
description:
  Transporter, gluconate:H+ symporter family; KEGG: eci:UTI89_C3106 1.1e-58 ygbN; inner membrane permease YgbN K03299; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02256
symbol: EHM52550.1
gene_biotype: protein_coding
description:
  NAD dependent epimerase/dehydratase family protein; KEGG: hse:Hsero_3065 2.1e-71 wcaG; nucleoside-diphosphate-sugar epimerase.


ensembl_gene_id: HMPREF9080_02258
symbol: EHM52552.1
gene_biotype: protein_coding
description:
  Putative hydroxypyruvate isomerase; KEGG: hiq:CGSHiGG_08675 5.4e-98 hypothetical protein; K01816 hydroxypyruvate isomerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the hyi family.


ensembl_gene_id: HMPREF9080_02259
symbol: EHM52553.1
gene_biotype: protein_coding
description:
  Putative aldolase; KEGG: hso:HS_0014 3.2e-84 fucA; putative aldolase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02260
symbol: EHM52554.1
gene_biotype: protein_coding
description:
  YgbK domain protein; KEGG: hiq:CGSHiGG_08665 1.9e-141 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.


ensembl_gene_id: HMPREF9080_02261
symbol: EHM52555.1
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase, NAD binding domain protein; KEGG: pmu:PM1366 1.3e-119 hypothetical protein; K00020 3-hydroxyisobutyrate dehydrogenase.


ensembl_gene_id: HMPREF9080_02262
symbol: EHM52556.1
gene_biotype: protein_coding
description:
  KEGG: cbk:CLL_A3266 1.1e-28 phosphotransferase system mannitol/fructose-specific IIA domain; K02821 PTS system, ascorbate-specific IIA component.


ensembl_gene_id: HMPREF9080_02266
symbol: EHM52532.1
gene_biotype: protein_coding
description:
  KEGG: ddd:Dda3937_04300 2.1e-07 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02269
symbol: EHM52523.1
gene_biotype: protein_coding
description:
  Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: rcp:RCAP_rcc00158 2.3e-35 M10 family peptidase; Psort location: Extracellular, score: 10.00.


ensembl_gene_id: HMPREF9080_02271
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; KEGG: dno:DNO_0208 6.9e-169 cysS; cysteinyl-tRNA synthetase class I K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9080_02274
symbol: EHM52499.1
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMPREF9080_02276
symbol: EHM52501.1
gene_biotype: protein_coding
description:
  Oligopeptide transporter, OPT family; KEGG: cbt:CLH_3237 0.0051 PTS system, sucrose-specific IIBC component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02277
symbol: EHM52502.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0415 1.1e-56 TatD family DNase; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02278
symbol: EHM52503.1
gene_biotype: protein_coding
description:
  KEGG: tmz:Tmz1t_3004 3.2e-84 rumA; 23S rRNA 5-methyluridine methyltransferase; K03215 RNA methyltransferase, TrmA family; Psort location: Cytoplasmic, score: 9.97; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMPREF9080_02280
symbol: EHM52505.1
gene_biotype: protein_coding
description:
  Acyltransferase; KEGG: asu:Asuc_0742 2.4e-32 acyltransferase 3; K11941 glucans biosynthesis protein C; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02282
symbol: EHM52507.1
gene_biotype: protein_coding
description:
  Transporter, Ni2+-Co2+ transporter family protein; KEGG: apb:SAR116_2222 1.7e-30 high-affinity nickel-transporter; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: HMPREF9080_02286
symbol: EHM52511.1
gene_biotype: protein_coding
description:
  RND transporter, HAE1/HME family, permease protein; KEGG: ddd:Dda3937_02820 2.9e-106 yegN, mdtB; acriflavin resistance plasma membrane protein K07788; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: HMPREF9080_02287
symbol: EHM52512.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 1.6e-27 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF9080_02289
symbol: EHM52480.1
gene_biotype: protein_coding
description:
  Beta-eliminating lyase; KEGG: cpy:Cphy_2181 1.5e-93 threonine aldolase K01620; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02292
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF9080_02293
symbol: EHM52484.1
gene_biotype: protein_coding
description:
  Aminomethyltransferase; KEGG: dno:DNO_1197 9.0e-128 gcvT; glycine cleavage system T protein K00605; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02297
symbol: EHM52435.1
gene_biotype: protein_coding
description:
  Acid phosphatase; KEGG: str:Sterm_3182 1.4e-92 acid phosphatase K09474; Psort location: Periplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_02299
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: HMPREF9080_02300
symbol: kdsA
gene_biotype: protein_coding
description:
  3-deoxy-8-phosphooctulonate synthase; KEGG: tkm:TK90_1471 5.5e-112 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Psort location: Cytoplasmic, score: 9.26; Belongs to the KdsA family.


ensembl_gene_id: HMPREF9080_02301
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMPREF9080_02302
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HMPREF9080_02304
symbol: EHM52442.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0394 1.5e-180 U32 family peptidase; K08303 putative protease; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02305
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: HMPREF9080_02307
symbol: EHM52445.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hip:CGSHiEE_08605 1.2e-75 selenocysteine synthase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02308
symbol: EHM52446.1
gene_biotype: protein_coding
description:
  Putative methylated-DNA--[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: HMPREF9080_02309
symbol: crcB
gene_biotype: protein_coding
description:
  Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: HMPREF9080_02310
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF9080_02313
symbol: EHM52451.1
gene_biotype: protein_coding
description:
  Citrate transporter; KEGG: ctu:Ctu_3p00400 4.9e-07 arsB; arsenical pump membrane protein K03893; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02315
symbol: EHM52453.1
gene_biotype: protein_coding
description:
  Putative octaprenyl pyrophosphate synthetase; KEGG: dno:DNO_0945 2.4e-102 polyprenyl synthase K02523; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: HMPREF9080_02316
symbol: EHM52454.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_1979 0.0016 integral membrane protein, putative K07090; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02317
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMPREF9080_02318
symbol: EHM52456.1
gene_biotype: protein_coding
description:
  Putative cytochrome C4; KEGG: bxe:Bxe_A0346 4.7e-35 cytochrome c, class I K00540; Psort location: Periplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_02319
symbol: EHM52457.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_0656 2.9e-28 uncharacterized conserved protein UCP006173 K09160; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0260 family.


ensembl_gene_id: HMPREF9080_02320
symbol: EHM52458.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: HMPREF9080_02321
symbol: EHM52459.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: nmn:NMCC_2119 1.1e-145 gapA2; glyceraldehyde 3-phosphate dehydrogenase C; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9080_02322
symbol: EHM52460.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sno:Snov_2585 2.6e-14 sulfate ABC transporter, ATPase subunit; K02045 sulfate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02323
symbol: EHM52461.1
gene_biotype: protein_coding
description:
  KEGG: sbn:Sbal195_1096 3.0e-33 sulfate ABC transporter, ATPase subunit; K02045 sulfate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_02326
symbol: EHM52464.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sen:SACE_0572 6.9e-08 ABC transporter, putative molybdenum transport system K02018; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02330
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: HMPREF9080_02333
symbol: EHM52405.1
gene_biotype: protein_coding
description:
  KEGG: vap:Vapar_4267 4.2e-34 RND efflux system, outer membrane lipoprotein, NodT family K00694; Psort location: OuterMembrane, score: 9.92.


ensembl_gene_id: HMPREF9080_02334
symbol: EHM52406.1
gene_biotype: protein_coding
description:
  Putative inner membrane multidrug efflux protein BpeB; KEGG: rcp:RCAP_rcc02895 2.7e-231 mdtF; multidrug resistance protein MdtF; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02335
symbol: EHM52407.1
gene_biotype: protein_coding
description:
  KEGG: rcp:RCAP_rcc02894 2.0e-43 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF9080_02336
symbol: EHM52408.1
gene_biotype: protein_coding
description:
  KEGG: mla:Mlab_1694 2.7e-05 TetR family transcriptional regulator K01409; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02339
symbol: EHM52411.1
gene_biotype: protein_coding
description:
  Putative outer membrane protein MIP; KEGG: dno:DNO_0012 3.2e-61 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773; Psort location: OuterMembrane, score: 9.93.


ensembl_gene_id: HMPREF9080_02340
symbol: EHM52412.1
gene_biotype: protein_coding
description:
  KEGG: pae:PA5025 3.2e-164 metY; O-acetylhomoserine aminocarboxypropyltransferase K01740; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02341
symbol: EHM52413.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0874 8.9e-192 aspA; aspartate ammonia-lyase K01744; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02344
symbol: EHM52416.1
gene_biotype: protein_coding
description:
  KEGG: bcy:Bcer98_1737 1.4e-44 amino acid/peptide transporter K03305; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02345
symbol: EHM52417.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: lre:Lreu_0277 3.3e-28 amino acid/peptide transporter K03305; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02351
symbol: EHM52422.1
gene_biotype: protein_coding
description:
  Von Willebrand factor type A domain protein; KEGG: rxy:Rxyl_0636 0.0052 protoporphyrin IX magnesium-chelatase K03404.


ensembl_gene_id: HMPREF9080_02354
symbol: EHM52425.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tgu:100222285 0.00091 similar to Dual specificity testis-specific protein kinase 1; K08841 testis-specific kinase 1; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02357
symbol: EHM52350.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0369 5.9e-124 exopolyphosphatase K01514; Psort location: Cytoplasmic, score: 9.97; Belongs to the GppA/Ppx family.


ensembl_gene_id: HMPREF9080_02359
symbol: EHM52352.1
gene_biotype: protein_coding
description:
  Nodulation efficiency protein D; KEGG: bde:BDP_1482 0.0094 ctpE; CtpE cation-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02360
symbol: EHM52353.1
gene_biotype: protein_coding
description:
  Hydrolase, NUDIX family; KEGG: bao:BAMF_0506 8.8e-50 yjhB; putative ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02361
symbol: EHM52354.1
gene_biotype: protein_coding
description:
  KEGG: llo:LLO_1443 0.00023 Sel1 repeat protein K07126; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02362
symbol: EHM52355.1
gene_biotype: protein_coding
description:
  Sel1 repeat protein; KEGG: mct:MCR_0405 8.9e-18 tetratricopeptide repeat family protein K07126; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02363
symbol: EHM52356.1
gene_biotype: protein_coding
description:
  SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 8.2e-47 membrane protease subunits, stomatin/prohibitin homologs; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02367
symbol: EHM52360.1
gene_biotype: protein_coding
description:
  Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bgl:bglu_1g28200 1.8e-13 ABC-type cobalamin/Fe3 -siderophores transport systems ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF9080_02368
symbol: EHM52361.1
gene_biotype: protein_coding
description:
  Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE; KEGG: avi:Avi_7625 2.6e-66 ABC transporter; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02370
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: HMPREF9080_02371
symbol: EHM52364.1
gene_biotype: protein_coding
description:
  Glycerate kinase; KEGG: bps:BPSS0127 5.8e-101 glxK, glxB5; glycerate kinase 1 K00865; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: HMPREF9080_02372
symbol: EHM52365.1
gene_biotype: protein_coding
description:
  Transporter, gluconate:H+ symporter family; KEGG: eci:UTI89_C3106 3.2e-52 ygbN; inner membrane permease YgbN K03299; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02374
symbol: EHM52367.1
gene_biotype: protein_coding
description:
  Membrane protein, DedA family; KEGG: sca:Sca_1961 9.5e-14 putative alkaline phosphatase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02375
symbol: EHM52368.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0086 1.2e-47 glutathione S-transferase K00799; Psort location: Cytoplasmic, score: 9.26; Belongs to the GST superfamily.


ensembl_gene_id: HMPREF9080_02378
symbol: EHM52371.1
gene_biotype: protein_coding
description:
  Aspartate racemase; KEGG: cco:CCC13826_1511 8.8e-50 aspartate racemase; K01779 aspartate racemase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02379
symbol: EHM52372.1
gene_biotype: protein_coding
description:
  KEGG: mdi:METDI1668 2.4e-12 ABC transporter, permease component; putative taurine transporter K02050; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02380
symbol: EHM52373.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; KEGG: oca:OCAR_4125 2.9e-35 aliphatic sulfonates import ATP-binding protein SsuB 2 K02049; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02386
symbol: EHM52312.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein A; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02388
symbol: EHM52314.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hip:CGSHiEE_03080 1.0e-39 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K06890; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the BI1 family.


ensembl_gene_id: HMPREF9080_02389
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HMPREF9080_02399
symbol: EHM52325.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ptm:GSPATT00006636001 3.1e-13 hypothetical protein; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02400
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMPREF9080_02401
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF9080_02402
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: HMPREF9080_02403
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: HMPREF9080_02407
symbol: EHM52333.1
gene_biotype: protein_coding
description:
  Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: ddd:Dda3937_01226 2.3e-26 outer membrane protein; Psort location: OuterMembrane, score: 9.93.


ensembl_gene_id: HMPREF9080_02408
symbol: EHM52334.1
gene_biotype: protein_coding
description:
  Putative macrolide export ATP-binding/permease protein MacB; KEGG: dno:DNO_0872 4.6e-179 macrolide-specific ABC-type efflux carrier protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02409
symbol: EHM52335.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: aha:AHA_2990 2.2e-08 macrolide-specific ABC-type efflux carrier; K05685 macrolide transport system ATP-binding/permease protein.


ensembl_gene_id: HMPREF9080_02410
symbol: EHM52336.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 1.6e-09 mdtE; multidrug resistance protein MdtE K03585; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF9080_02412
symbol: EHM52338.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: hiq:CGSHiGG_03235 7.1e-25 fbpC; ferric transporter ATP-binding subunit K02012.


ensembl_gene_id: HMPREF9080_02417
symbol: EHM52250.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rpc:RPC_4646 0.0046 NADH dehydrogenase (quinone) K05903; Psort location: CytoplasmicMembrane, score: 9.46.


ensembl_gene_id: HMPREF9080_02418
symbol: EHM52251.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: eci:UTI89_C4946 3.6e-19 ShlA/HecA/FhaA exofamily protein; Psort location: OuterMembrane, score: 9.49.


ensembl_gene_id: HMPREF9080_02419
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMPREF9080_02420
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase, YidC/Oxa1 family domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: HMPREF9080_02421
symbol: EHM52254.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: HMPREF9080_02423
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF9080_02428
symbol: EHM52261.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0608 2.9e-145 ribonucleotide reductase, beta subunit K00526; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02429
symbol: EHM52262.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha chain; KEGG: dno:DNO_0607 1.0e-254 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02434
symbol: EHM52267.1
gene_biotype: protein_coding
description:
  Acetyltransferase, GNAT family; KEGG: scl:sce7818 2.0e-13 rimI3; ribosomal-protein-alanine N-acetyltransferase.


ensembl_gene_id: HMPREF9080_02438
symbol: EHM52271.1
gene_biotype: protein_coding
description:
  Ser/Thr phosphatase family protein; KEGG: sma:SAV_2323 1.9e-14 prpA1; serine/threonine protein phosphatase; K01090 protein phosphatase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02443
symbol: EHM52276.1
gene_biotype: protein_coding
description:
  KEGG: bal:BACI_c10050 7.6e-06 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02445
symbol: EHM52278.1
gene_biotype: protein_coding
description:
  Putative superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: HMPREF9080_02446
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: HMPREF9080_02447
symbol: EHM52280.1
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase, alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: HMPREF9080_02448
symbol: EHM52281.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta domain protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: HMPREF9080_02449
symbol: EHM52282.1
gene_biotype: protein_coding
description:
  Putative heme ABC exporter, ATP-binding protein CcmA; KEGG: rcp:RCAP_rcp00073 3.3e-59 nosF; copper ABC transporter ATP-binding protein NosF; Psort location: CytoplasmicMembrane, score: 9.82.


ensembl_gene_id: HMPREF9080_02450
symbol: EHM52283.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ddd:Dda3937_04140 5.0e-19 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02451
symbol: EHM52284.1
gene_biotype: protein_coding
description:
  Putative membrane protein NosY; KEGG: sde:Sde_3669 0.0048 sensory transduction protein kinase AlgZ K08082; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02460
symbol: EHM52210.1
gene_biotype: protein_coding
description:
  Xaa-His dipeptidase; KEGG: dno:DNO_0013 2.8e-108 aminoacyl-histidine dipeptidase; K01270 aminoacylhistidine dipeptidase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02461
symbol: EHM52211.1
gene_biotype: protein_coding
description:
  Putative protease SohB; KEGG: dno:DNO_0048 1.0e-94 putative periplasmic protease; K04774 serine protease SohB; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02462
symbol: EHM52212.1
gene_biotype: protein_coding
description:
  KEGG: noc:Noc_2644 2.1e-29 ABC transporter, ATPase subunit K01990; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02463
symbol: rpmG
gene_biotype: protein_coding
description:
  Ribosomal protein L33; KEGG: apb:SAR116_0619 8.5e-13 ribosomal protein L33 K02913; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: HMPREF9080_02464
symbol: rpmB
gene_biotype: protein_coding
description:
  Ribosomal protein L28; KEGG: apb:SAR116_1905 5.2e-13 LSU ribosomal protein L28P K02902; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: HMPREF9080_02466
symbol: EHM52215.1
gene_biotype: protein_coding
description:
  Putative beta-L-N-acetylhexosaminidase; KEGG: dno:DNO_0021 2.0e-84 beta-hexosaminidase K01207; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02467
symbol: EHM52216.1
gene_biotype: protein_coding
description:
  Ribosomal protein L33 family protein; KEGG: dha:DEHA2B15862g 0.0023 DEHA2B15862p; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: HMPREF9080_02468
symbol: EHM52217.1
gene_biotype: protein_coding
description:
  KEGG: prw:PsycPRwf_1210 1.5e-70 hypoxanthine-guanine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02473
symbol: EHM52178.1
gene_biotype: protein_coding
description:
  KEGG: cch:Cag_1938 3.6e-30 Sel1 repeat-containing protein K07126; Psort location: Extracellular, score: 9.71.


ensembl_gene_id: HMPREF9080_02477
symbol: EHM52182.1
gene_biotype: protein_coding
description:
  MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.3e-57 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02483
symbol: EHM52109.1
gene_biotype: protein_coding
description:
  SPFH/Band 7/PHB domain protein; KEGG: son:SO_0606 3.5e-16 hflC; HflC protein; K04087 membrane protease subunit HflC; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02485
symbol: EHM52111.1
gene_biotype: protein_coding
description:
  KEGG: asu:Asuc_2073 3.3e-50 carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02486
symbol: EHM52112.1
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: HMPREF9080_02488
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: HMPREF9080_02489
symbol: EHM52115.1
gene_biotype: protein_coding
description:
  Transporter, major facilitator family protein; KEGG: apb:SAR116_1122 8.8e-14 tetracycline resistance protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02494
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; KEGG: mca:MCA1248 2.8e-165 argH; argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02495
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: HMPREF9080_02496
symbol: EHM52122.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: HMPREF9080_02497
symbol: EHM52123.1
gene_biotype: protein_coding
description:
  KEGG: swd:Swoo_0481 4.7e-07 protein of unknown function DUF513 HemX; K02496 uroporphyrin-III C-methyltransferase.


ensembl_gene_id: HMPREF9080_02498
symbol: EHM52124.1
gene_biotype: protein_coding
description:
  KEGG: yen:YE0184 4.5e-13 hemY; putative protoheme IX biogenesis protein K02498; Psort location: CytoplasmicMembrane, score: 9.99.


ensembl_gene_id: HMPREF9080_02501
symbol: EHM52127.1
gene_biotype: protein_coding
description:
  Prokaryotic diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: HMPREF9080_02502
symbol: EHM52128.1
gene_biotype: protein_coding
description:
  Ribosomal protein S20; KEGG: rcu:RCOM_2071510 6.1e-07 formamidopyrimidine-DNA glycosylase, putative; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02503
symbol: hemL
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1024 3.0e-143 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02505
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: HMPREF9080_02506
symbol: EHM52132.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1022 1.6e-50 methylenetetrahydrofolate reductase family protein; K00297 methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: HMPREF9080_02507
symbol: tadA
gene_biotype: protein_coding
description:
  Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF9080_02510
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: HMPREF9080_02511
symbol: EHM52137.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0983 3.1e-38 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02513
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: HMPREF9080_02514
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF9080_02515
symbol: EHM52141.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0986 5.4e-114 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase K01928; Psort location: Cytoplasmic, score: 8.96; Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: HMPREF9080_02517
symbol: EHM52143.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein, transpeptidase domain protein; KEGG: dno:DNO_0987 5.4e-169 ftsI; cell division protein FtsI K03587; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02519
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF9080_02520
symbol: mraZ
gene_biotype: protein_coding
description:
  Protein MraZ; KEGG: apb:SAR116_2343 1.7e-07 protein of unknown function UPF0040 K03925; Psort location: Cytoplasmic, score: 9.97; Belongs to the MraZ family.


ensembl_gene_id: HMPREF9080_02521
symbol: EHM52147.1
gene_biotype: protein_coding
description:
  SPFH/Band 7/PHB domain protein; KEGG: pau:PA14_33080 2.8e-07 hypothetical protein; K04087 membrane protease subunit HflC.


ensembl_gene_id: HMPREF9080_02522
symbol: EHM52148.1
gene_biotype: protein_coding
description:
  Peptidoglycan binding domain protein; KEGG: scb:SCAB_40761 4.5e-15 tmk; putative thymidylate kinase; K00943 dTMP kinase.


ensembl_gene_id: HMPREF9080_02523
symbol: EHM52149.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0957 1.9e-47 ADP-ribose pyrophosphatase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02524
symbol: EHM52150.1
gene_biotype: protein_coding
description:
  Peptidase, M23 family; KEGG: kpe:KPK_0782 6.4e-31 M23 peptidase domain protein K12943; Psort location: OuterMembrane, score: 9.92.


ensembl_gene_id: HMPREF9080_02525
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: HMPREF9080_02527
symbol: EHM52153.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMPREF9080_02528
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF9080_02529
symbol: EHM52155.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0327 3.8e-113 galU; UTP--glucose-1-phosphate uridylyltransferase K00963; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02532
symbol: EHM52158.1
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: apb:SAR116_1946 5.0e-56 oxidoreductase, putative; Psort location: Cytoplasmic, score: 9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9080_02533
symbol: EHM52159.1
gene_biotype: protein_coding
description:
  Putative MltA-interacting protein; KEGG: sde:Sde_0548 1.2e-05 PAS/PAC sensor signal transduction histidine kinase K07274; Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02534
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF9080_02538
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: HMPREF9080_02541
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF9080_02542
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: HMPREF9080_02544
symbol: EHM52170.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: btk:BT9727_0893 1.8e-06 CAAX amino terminal protease family protein (STE24 endopeptidase); K06013 STE24 endopeptidase K07052; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02550
symbol: EHM52058.1
gene_biotype: protein_coding
description:
  LysR substrate binding domain protein; KEGG: spe:Spro_1179 1.1e-67 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF9080_02551
symbol: EHM52059.1
gene_biotype: protein_coding
description:
  Flavodoxin-like protein; KEGG: bld:BLi03696 4.8e-42 ywrO; YwrO; K00358; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02552
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF9080_02553
symbol: EHM52061.1
gene_biotype: protein_coding
description:
  DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF9080_02558
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: HMPREF9080_02560
symbol: EHM52067.1
gene_biotype: protein_coding
description:
  Phage prohead protease, HK97 family; KEGG: dno:DNO_0212 4.6e-188 FAD dependent oxidoreductase family protein; K00111 glycerol-3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02562
symbol: EHM52069.1
gene_biotype: protein_coding
description:
  Serine 3-dehydrogenase; KEGG: asa:ASA_3706 3.9e-88 short-chain alcohol dehydrogenase family protein; K00540; Psort location: Cytoplasmic, score: 9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9080_02563
symbol: EHM52070.1
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; KEGG: pam:PANA_0207 1.2e-45 birA; BirA; K03524 BirA family transcriptional regulator, biotin operon repressor.


ensembl_gene_id: HMPREF9080_02564
symbol: EHM52071.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bmv:BMASAVP1_A3140 2.0e-08 putative thiol:disulfide interchange protein DsbD; K04084 thiol:disulfide interchange protein DsbD; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02566
symbol: EHM52073.1
gene_biotype: protein_coding
description:
  Putative periplasmic oligopeptide-binding protein; KEGG: bac:BamMC406_5413 4.0e-93 4-phytase K02035; Psort location: Periplasmic, score: 10.00.


ensembl_gene_id: HMPREF9080_02567
symbol: EHM52074.1
gene_biotype: protein_coding
description:
  Putative periplasmic oligopeptide-binding protein; KEGG: bac:BamMC406_5413 9.3e-94 4-phytase K02035; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_02568
symbol: EHM52075.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, cyclophilin-type family protein; KEGG: sml:Smlt1483 1.3e-87 putative peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_02571
symbol: EHM52078.1
gene_biotype: protein_coding
description:
  Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain protein; KEGG: rxy:Rxyl_2847 3.5e-55 aspartate carbamoyltransferase.


ensembl_gene_id: HMPREF9080_02575
symbol: EHM52082.1
gene_biotype: protein_coding
description:
  Allantoinase domain protein; KEGG: bcl:ABC3732 6.4e-47 pucH; allantoinase K01466; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02577
symbol: EHM52084.1
gene_biotype: protein_coding
description:
  Carbamate kinase; KEGG: hip:CGSHiEE_09190 3.5e-110 carbamate kinase K00926; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02579
symbol: EHM51964.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rca:Rcas_4118 3.3e-07 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme); Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02582
symbol: EHM51967.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: eam:EAMY_0301 0.00016 yhcB; putative cytochrome d ubiquinol oxidase subunit III K09908.


ensembl_gene_id: HMPREF9080_02583
symbol: EHM51968.1
gene_biotype: protein_coding
description:
  KEGG: xal:XALc_1828 0.0018 putative glycine cleavage system t (aminomethyltransferase) protein K06980; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02586
symbol: EHM51971.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0910 2.1e-261 nrdD; anaerobic ribonucleoside triphosphate reductase K00527; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02587
symbol: EHM51972.1
gene_biotype: protein_coding
description:
  KEGG: apl:APL_0164 1.6e-36 hypothetical protein; K04068 anaerobic ribonucleoside-triphosphate reductase activating protein.


ensembl_gene_id: HMPREF9080_02589
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: HMPREF9080_02590
symbol: EHM51975.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0306 9.7e-60 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF9080_02591
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF9080_02592
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: HMPREF9080_02593
symbol: EHM51978.1
gene_biotype: protein_coding
description:
  Cytochrome; KEGG: mdi:METDI0367 1.0e-23 putative cytochrome c; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_02595
symbol: ilvD
gene_biotype: protein_coding
description:
  KEGG: maq:Maqu_2423 7.7e-257 dihydroxy-acid dehydratase K01687; Psort location: Cytoplasmic, score: 9.97; Belongs to the IlvD/Edd family.


ensembl_gene_id: HMPREF9080_02596
symbol: EHM51981.1
gene_biotype: protein_coding
description:
  Phospholipid-binding domain protein; KEGG: apb:SAR116_1626 1.5e-07 transport-associated protein; Psort location: Periplasmic, score: 9.44.


ensembl_gene_id: HMPREF9080_02599
symbol: EHM51984.1
gene_biotype: protein_coding
description:
  Gram-negative porin; KEGG: hip:CGSHiEE_02590 1.2e-05 nagA; N-acetylglucosamine-6-phosphate deacetylase; Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02600
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF9080_02601
symbol: EHM51986.1
gene_biotype: protein_coding
description:
  Aspartate kinase, monofunctional class; KEGG: tgr:Tgr7_1290 1.3e-144 aspartate kinase K00928; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartokinase family.


ensembl_gene_id: HMPREF9080_02602
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF9080_02604
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF9080_02605
symbol: EHM51990.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; KEGG: pzu:PHZ_c2949 1.3e-12 pldB; lysophospholipase L2; K01048 lysophospholipase; Psort location: Periplasmic, score: 9.80.


ensembl_gene_id: HMPREF9080_02606
symbol: EHM51991.1
gene_biotype: protein_coding
description:
  Putative aliphatic sulfonates transport permease protein SsuC; KEGG: pam:PANA_1376 5.4e-43 ssuD; SsuD; K04091 alkanesulfonate monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02607
symbol: EHM51992.1
gene_biotype: protein_coding
description:
  KEGG: mpi:Mpet_2283 8.5e-45 ABC transporter-like protein K02049; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02608
symbol: EHM51993.1
gene_biotype: protein_coding
description:
  NMT1/THI5-like protein; KEGG: apb:SAR116_1971 6.1e-07 ABC transporter, periplasmic substrate-binding protein K02051.


ensembl_gene_id: HMPREF9080_02609
symbol: EHM51994.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; KEGG: mct:MCR_0149 6.4e-134 putative ATP-dependent DEAD/DEAH box RNA-helicase; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02621
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF9080_02627
symbol: EHM51933.1
gene_biotype: protein_coding
description:
  ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rme:Rmet_3005 7.3e-78 periplasmic sensor signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02631
symbol: EHM51850.1
gene_biotype: protein_coding
description:
  Peptidase S24-like protein; KEGG: pmr:PMI2484 2.2e-30 umuD; DNA repair protein K03503; Belongs to the peptidase S24 family.


ensembl_gene_id: HMPREF9080_02632
symbol: EHM51851.1
gene_biotype: protein_coding
description:
  DNA polymerase V subunit UmuC; KEGG: mmw:Mmwyl1_1982 1.7e-110 DNA-directed DNA polymerase K03502; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02636
symbol: EHM51855.1
gene_biotype: protein_coding
description:
  Bacterial stress protein; KEGG: gbr:Gbro_4769 1.9e-10 exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02641
symbol: EHM51860.1
gene_biotype: protein_coding
description:
  ATPase, AAA family; KEGG: hse:Hsero_3473 2.7e-39 spoVK; AAA+ class ATPase; Psort location: CytoplasmicMembrane, score: 7.88.


ensembl_gene_id: HMPREF9080_02643
symbol: EHM51862.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bpm:BURPS1710b_1670 1.3e-13 DNA methylase; K00590 site-specific DNA-methyltransferase (cytosine-N4-specific).


ensembl_gene_id: HMPREF9080_02644
symbol: EHM51841.1
gene_biotype: protein_coding
description:
  Modification methylase BsuBI family protein; KEGG: scl:sce7793 2.1e-87 yhdJ; site-specific DNA-methyxltransferase (adenine-specific); Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02645
symbol: EHM51842.1
gene_biotype: protein_coding
description:
  BsuBI/PstI restriction endonuclease; KEGG: dol:Dole_3089 1.7e-140 type II site-specific deoxyribonuclease K01155.


ensembl_gene_id: HMPREF9080_02646
symbol: EHM51843.1
gene_biotype: protein_coding
description:
  KEGG: yps:YPTB1797 7.6e-28 putative DNA methyltransferase; K07319 putative adenine-specific DNA-methyltransferase.


ensembl_gene_id: HMPREF9080_02647
symbol: EHM51696.1
gene_biotype: protein_coding
description:
  KEGG: yps:YPTB1797 1.2e-45 putative DNA methyltransferase; K07319 putative adenine-specific DNA-methyltransferase.


ensembl_gene_id: HMPREF9080_02648
symbol: EHM51682.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: yps:YPTB1797 1.2e-22 putative DNA methyltransferase; K07319 putative adenine-specific DNA-methyltransferase.


ensembl_gene_id: HMPREF9080_02654
symbol: EHM51668.1
gene_biotype: protein_coding
description:
  KEGG: shn:Shewana3_3590 3.7e-19 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02662
symbol: EHM51406.1
gene_biotype: protein_coding
description:
  Topoisomerase DNA-binding C4 zinc finger domain protein; KEGG: dsa:Desal_1684 7.5e-15 DNA topoisomerase type IA central domain protein; K03169 DNA topoisomerase III.


ensembl_gene_id: HMPREF9080_02663
symbol: EHM51401.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: xfa:XFa0003 2.3e-31 topoisomerase I; K03168 DNA topoisomerase I; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02664
symbol: EHM51389.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: xfa:XFa0003 4.8e-30 topoisomerase I; K03168 DNA topoisomerase I; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02667
symbol: EHM51349.1
gene_biotype: protein_coding
description:
  Putative DNA topoisomerase; KEGG: xfa:XFa0003 6.7e-40 topoisomerase I; K03168 DNA topoisomerase I; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02668
symbol: EHM51110.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: HMPREF9080_02669
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: HMPREF9080_02670
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF9080_02672
symbol: EHM51114.1
gene_biotype: protein_coding
description:
  Peptidase, S54 family; KEGG: ssa:SSA_2170 1.0e-09 hypothetical protein; K01362; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02677
symbol: EHM51117.1
gene_biotype: protein_coding
description:
  Peptidase, M48 family; KEGG: pcu:pc0901 1.2e-33 hypothetical protein; K03799 heat shock protein HtpX; Psort location: CytoplasmicMembrane, score: 9.97.


ensembl_gene_id: HMPREF9080_02678
symbol: EHM51118.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: asu:Asuc_1297 2.4e-40 pyridoxal-5'-phosphate-dependent protein beta subunit; K01733 threonine synthase.


ensembl_gene_id: HMPREF9080_02680
symbol: EHM51120.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bpl:BURPS1106A_2261 9.3e-20 clpB; ClpB protein K03695; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02681
symbol: EHM51121.1
gene_biotype: protein_coding
description:
  ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.


ensembl_gene_id: HMPREF9080_02683
symbol: rsmI
gene_biotype: protein_coding
description:
  S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMPREF9080_02684
symbol: EHM51046.1
gene_biotype: protein_coding
description:
  TIGR00252 family protein; KEGG: sat:SYN_00772 1.9e-15 endonuclease K07460; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0102 family.


ensembl_gene_id: HMPREF9080_02685
symbol: EHM51047.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0550 3.4e-05 ribosomal subunit interface protein, putative; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02686
symbol: EHM51048.1
gene_biotype: protein_coding
description:
  KEGG: xcv:XCV1026 6.8e-20 dsbB; disulfide bond formation protein B K03611; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02691
symbol: EHM51053.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: HMPREF9080_02694
symbol: EHM51056.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0565 3.1e-79 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF9080_02695
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9080_02696
symbol: lapB
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: HMPREF9080_02698
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HMPREF9080_02700
symbol: EHM51062.1
gene_biotype: protein_coding
description:
  KEGG: msu:MS1058 3.3e-114 lplA; LplA protein; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02702
symbol: EHM51064.1
gene_biotype: protein_coding
description:
  KEGG: pla:Plav_1369 6.6e-45 glutamine amidotransferase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02704
symbol: EHM51016.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: apb:SAR116_2148 3.2e-45 muropeptide permease K08218; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02705
symbol: EHM51017.1
gene_biotype: protein_coding
description:
  Transporter, bile acid/Na+ symporter family protein; KEGG: sen:SACE_5143 0.00044 arsenical resistance protein/arsenate reductase K03741; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02706
symbol: EHM51018.1
gene_biotype: protein_coding
description:
  Nudix hydrolase 24, family protein; KEGG: tps:THAPSDRAFT_262503 4.5e-39 thiamin pyrophosphokinase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02715
symbol: EHM50950.1
gene_biotype: protein_coding
description:
  Putative phosphoserine phosphatase SerB; KEGG: mbr:MONBRDRAFT_16456 7.2e-32 hypothetical protein; K01079 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02716
symbol: EHM50951.1
gene_biotype: protein_coding
description:
  Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: ddd:Dda3937_01226 2.5e-38 outer membrane protein; Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02717
symbol: EHM50952.1
gene_biotype: protein_coding
description:
  ABC-2 type transporter; KEGG: bbt:BBta_3660 2.4e-23 ABC transporter permease ATP-binding protein K13926; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02718
symbol: EHM50953.1
gene_biotype: protein_coding
description:
  KEGG: bbt:BBta_7849 3.4e-151 ABC transporter permease ATP-binding protein K13926; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02719
symbol: EHM50922.1
gene_biotype: protein_coding
description:
  YhcH/YjgK/YiaL family protein; KEGG: snc:HMPREF0837_11934 2.2e-05 putative beta-galactosidase, subunit beta; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02720
symbol: tal-2
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: HMPREF9080_02724
symbol: EHM50912.1
gene_biotype: protein_coding
description:
  Integrating conjugative element protein, PFL_4669 family; KEGG: eci:UTI89_C0735 0.0011 tolA; cell envelope integrity inner membrane protein TolA K03646; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02735
symbol: EHM50793.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: xfa:XFa0003 2.1e-24 topoisomerase I; K03168 DNA topoisomerase I; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02751
symbol: EHM50607.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: HMPREF9080_02752
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF9080_02753
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF9080_02756
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF9080_02761
symbol: EHM50617.1
gene_biotype: protein_coding
description:
  KEGG: msu:MS1532 1.9e-38 pgpB; PgpB protein; K01096 phosphatidylglycerophosphatase B; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02764
symbol: EHM50620.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: rcp:RCAP_rcc01900 3.2e-05 hemolysin-type calcium-binding repeat family protein; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_02765
symbol: EHM50577.1
gene_biotype: protein_coding
description:
  Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: ava:Ava_3643 4.7e-14 Na-Ca exchanger/integrin-beta4 K01406; Psort location: Extracellular, score: 10.00.


ensembl_gene_id: HMPREF9080_02766
symbol: EHM50578.1
gene_biotype: protein_coding
description:
  Leucine Rich repeat-containing domain protein; KEGG: cai:Caci_7693 7.6e-56 phosphoprotein phosphatase; Psort location: Extracellular, score: 9.45.


ensembl_gene_id: HMPREF9080_02768
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMPREF9080_02769
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF9080_02770
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF9080_02771
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF9080_02772
symbol: EHM50583.1
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HMPREF9080_02773
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: HMPREF9080_02774
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: HMPREF9080_02776
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HMPREF9080_02777
symbol: EHM50588.1
gene_biotype: protein_coding
description:
  Glyoxalase family protein; KEGG: ddd:Dda3937_01893 5.1e-38 yaeR; putative lyase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02779
symbol: EHM50590.1
gene_biotype: protein_coding
description:
  Pseudouridylate synthase; KEGG: dno:DNO_0479 1.8e-44 rluB; ribosomal large subunit pseudouridine synthase, RluB K06178; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02780
symbol: EHM50591.1
gene_biotype: protein_coding
description:
  S4 domain protein; KEGG: dno:DNO_0479 4.0e-31 rluB; ribosomal large subunit pseudouridine synthase, RluB K06178.


ensembl_gene_id: HMPREF9080_02781
symbol: EHM50592.1
gene_biotype: protein_coding
description:
  KEGG: apb:SAR116_0418 1.5e-15 predicted transcriptional regulator containing the HTH domain K06024; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02785
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9080_02786
symbol: EHM50597.1
gene_biotype: protein_coding
description:
  Aromatic amino acid transport protein; KEGG: hiq:CGSHiGG_06840 3.1e-125 surE; stationary phase survival protein SurE K03835; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02787
symbol: tnaA
gene_biotype: protein_coding
description:
  KEGG: pmu:PM1420 3.0e-230 tnaA; tryptophanase K01667; Psort location: Cytoplasmic, score: 8.96; Belongs to the beta-eliminating lyase family.


ensembl_gene_id: HMPREF9080_02789
symbol: EHM50533.1
gene_biotype: protein_coding
description:
  Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02791
symbol: EHM50535.1
gene_biotype: protein_coding
description:
  KEGG: xfa:XF2726 5.7e-55 type I restriction-modification system specificity determinant; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02792
symbol: EHM50536.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ngk:NGK_0572 2.8e-53 type I restriction-modification system specificity determinant; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 9.26.


ensembl_gene_id: HMPREF9080_02796
symbol: EHM50471.1
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: HMPREF9080_02797
symbol: EHM50472.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ngo:NGO0407 2.2e-78 putative type I site-specific deoxyribonuclease K01153; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02799
symbol: purM
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1113 4.1e-132 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02800
symbol: purC
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_1112 7.8e-90 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923; Psort location: Cytoplasmic, score: 9.97; Belongs to the SAICAR synthetase family.


ensembl_gene_id: HMPREF9080_02801
symbol: EHM50476.1
gene_biotype: protein_coding
description:
  KEGG: dba:Dbac_0959 5.4e-11 4-oxalocrotonate tautomerase family enzyme; K01821 4-oxalocrotonate tautomerase.


ensembl_gene_id: HMPREF9080_02807
symbol: EHM50482.1
gene_biotype: protein_coding
description:
  KEGG: bra:BRADO6119 3.8e-97 putative ABC transporter (fused ATP-binding and permease components) K02471; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02809
symbol: EHM50484.1
gene_biotype: protein_coding
description:
  KEGG: hse:Hsero_0986 3.5e-26 fbpC; TonB-dependent siderophore receptor protein K02014; Psort location: OuterMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02810
symbol: EHM50485.1
gene_biotype: protein_coding
description:
  TonB family domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: HMPREF9080_02812
symbol: EHM50487.1
gene_biotype: protein_coding
description:
  tonB-system energizer ExbB; KEGG: apb:SAR116_2296 1.7e-09 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02815
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.


ensembl_gene_id: HMPREF9080_02816
symbol: EHM50491.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tro:trd_A0804 0.0013 F420-0:gamma-glutamyl ligase; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02817
symbol: EHM50492.1
gene_biotype: protein_coding
description:
  Organophosphate reductase; KEGG: asu:Asuc_0062 1.7e-117 2,5-didehydrogluconate reductase K06221; Psort location: Cytoplasmic, score: 9.97.


ensembl_gene_id: HMPREF9080_02818
symbol: EHM50493.1
gene_biotype: protein_coding
description:
  ISPs1, transposase OrfA family protein; KEGG: bid:Bind_3797 2.9e-08 mannitol dehydrogenase domain-containing protein; K00045 mannitol 2-dehydrogenase.


ensembl_gene_id: HMPREF9080_02819
symbol: EHM50494.1
gene_biotype: protein_coding
description:
  Putative protease 2; KEGG: xac:XAC0631 2.6e-265 ptrB; oligopeptidase B; K01354 oligopeptidase B; Psort location: Periplasmic, score: 9.76.


ensembl_gene_id: HMPREF9080_02825
symbol: EHM50500.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afm:AFUA_5G03760 1.4e-05 class III chitinase ChiA1 K01183; Psort location: Extracellular, score: 9.64.


ensembl_gene_id: HMPREF9080_02826
symbol: EHM50501.1
gene_biotype: protein_coding
description:
  KEGG: dno:DNO_0129 7.0e-144 dacB; D-alanyl-D-alanine carboxypeptidase K07259; Psort location: Periplasmic, score: 9.44.


ensembl_gene_id: HMPREF9080_02828
symbol: EHM50503.1
gene_biotype: protein_coding
description:
  YHS domain protein; KEGG: cpo:COPRO5265_1254 0.0047 copper-transporting P-type ATPase; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02829
symbol: EHM50504.1
gene_biotype: protein_coding
description:
  Efflux ABC transporter, permease protein; KEGG: met:M446_6611 4.4e-08 ABC transporter related; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02830
symbol: EHM50505.1
gene_biotype: protein_coding
description:
  Efflux ABC transporter, permease protein; KEGG: dol:Dole_1627 2.5e-08 ABC transporter-related protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.


ensembl_gene_id: HMPREF9080_02831
symbol: EHM50506.1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas3-HD; KEGG: rcp:RCAP_rcc01300 2.8e-140 Cas3 family CRISPR-associated helicase K07012.


ensembl_gene_id: HMPREF9080_02838
symbol: EHM50513.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: HMPREF9080_02851
symbol: EHM50223.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gox:GOX0018 0.0047 thymidylate kinase K00943; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02855
symbol: EHM50227.1
gene_biotype: protein_coding
description:
  Putative integrating conjugative element relaxase, PFGI-1 class; KEGG: hel:HELO_1989 0.0043 rne; ribonuclease, Rne/Rng family.


ensembl_gene_id: HMPREF9080_02857
symbol: EHM50229.1
gene_biotype: protein_coding
description:
  Integrating conjugative element protein PilL, PFGI-1 class; KEGG: sce:YIR019C 3.4e-20 MUC1, FLO11, STA4; GPI-anchored cell surface glycoprotein (flocculin) required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p); K01178 glucoamylase.


ensembl_gene_id: HMPREF9080_02860
symbol: EHM50232.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: gtn:GTNG_3300 0.0054 NADH dehydrogenase subunit C K00332; Psort location: Cytoplasmic, score: 8.96.


ensembl_gene_id: HMPREF9080_02861
symbol: EHM50233.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; KEGG: xca:xccb100_1847 1.6e-20 putative soluble lytic murein transglycosylase; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02862
symbol: EHM50234.1
gene_biotype: protein_coding
description:
  Transglycosylase SLT domain protein; KEGG: sat:SYN_02783 2.0e-27 soluble lytic murein transglycosylase K01238; overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9080_02880
symbol: EHM50252.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ecb:100053186 0.0014 similar to DNA ligase 1 (DNA ligase I) (Polydeoxyribonucleotide synthase [ATP] 1); K10747 DNA ligase 1.


