# geneInfo

ensembl_gene_id: SAMN05660742_101117
symbol: SEI81089.1
gene_biotype: protein_coding
description:
  Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: SAMN05660742_101119
symbol: SEI81153.1
gene_biotype: protein_coding
description:
  Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.


ensembl_gene_id: SAMN05660742_101129
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN05660742_10113
symbol: SEI77732.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05660742_101130
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN05660742_101136
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05660742_10114
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN05660742_101143
symbol: SEI81981.1
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN05660742_101144
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN05660742_101149
symbol: SEI82209.1
gene_biotype: protein_coding
description:
  phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.


ensembl_gene_id: SAMN05660742_101161
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN05660742_101164
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: SAMN05660742_101165
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN05660742_101166
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05660742_101168
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05660742_101170
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN05660742_101171
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN05660742_101181
symbol: SEI83313.1
gene_biotype: protein_coding
description:
  RNase H-fold protein, predicted Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: SAMN05660742_101189
symbol: SEI83619.1
gene_biotype: protein_coding
description:
  rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: SAMN05660742_1012
symbol: SEI77469.1
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN05660742_101202
symbol: SEI84106.1
gene_biotype: protein_coding
description:
  D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SAMN05660742_10121
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).


ensembl_gene_id: SAMN05660742_10123
symbol: SEI78014.1
gene_biotype: protein_coding
description:
  3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.


ensembl_gene_id: SAMN05660742_101230
symbol: SEI85137.1
gene_biotype: protein_coding
description:
  Flagellin FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN05660742_10124
symbol: SEI78037.1
gene_biotype: protein_coding
description:
  MFS transporter, SP family, major inositol transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05660742_101241
symbol: SEI85518.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05660742_101246
symbol: SEI85691.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: SAMN05660742_10125
symbol: iolE
gene_biotype: protein_coding
description:
  2-keto-myo-inositol dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).


ensembl_gene_id: SAMN05660742_101251
symbol: SEI85834.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6).


ensembl_gene_id: SAMN05660742_101257
symbol: SEI86023.1
gene_biotype: protein_coding
description:
  PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: SAMN05660742_101260
symbol: SEI86097.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN05660742_101272
symbol: SEI86424.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05660742_101279
symbol: kduI
gene_biotype: protein_coding
description:
  4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: SAMN05660742_101281
symbol: kdgT
gene_biotype: protein_coding
description:
  2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.


ensembl_gene_id: SAMN05660742_101290
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05660742_101291
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05660742_101301
symbol: SEI87186.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN05660742_101303
symbol: SEI87243.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN05660742_101306
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05660742_101315
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05660742_101316
symbol: SEI87559.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05660742_101319
symbol: SEI87612.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase (GGDEF) domain-containing protein/hemerythrin-like metal-binding domain protein.


ensembl_gene_id: SAMN05660742_101320
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05660742_101322
symbol: SEI87706.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05660742_101328
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN05660742_101333
symbol: SEI88073.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05660742_101334
symbol: macB
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN05660742_101343
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN05660742_101346
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN05660742_101359
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05660742_101360
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05660742_10142
symbol: iolG
gene_biotype: protein_coding
description:
  Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.


ensembl_gene_id: SAMN05660742_10154
symbol: SEI78977.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN05660742_10169
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05660742_1017
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN05660742_10170
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN05660742_10171
symbol: SEI79527.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN05660742_10172
symbol: SEI79551.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05660742_10174
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05660742_10175
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN05660742_10179
symbol: SEI79766.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN05660742_10182
symbol: atpB
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05660742_10183
symbol: atpE
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05660742_10184
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05660742_10185
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05660742_10186
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05660742_10187
symbol: atpG
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05660742_10188
symbol: atpD
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05660742_10189
symbol: atpC
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05660742_10190
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05660742_10194
symbol: SEI80277.1
gene_biotype: protein_coding
description:
  Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05660742_102104
symbol: SEI96621.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05660742_102125
symbol: SEI97248.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN05660742_102156
symbol: SEI98080.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05660742_102158
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN05660742_102193
symbol: phnW
gene_biotype: protein_coding
description:
  2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.


ensembl_gene_id: SAMN05660742_102194
symbol: phnX
gene_biotype: protein_coding
description:
  Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.


ensembl_gene_id: SAMN05660742_102195
symbol: SEI99132.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660742_102227
symbol: SEJ00081.1
gene_biotype: protein_coding
description:
  T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: SAMN05660742_10223
symbol: SEI94498.1
gene_biotype: protein_coding
description:
  Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05660742_102280
symbol: SEJ01569.1
gene_biotype: protein_coding
description:
  PTS system D-mannitol-specific IIB component, Fru family /PTS system D-mannitol-specific IIC component, Fru family.


ensembl_gene_id: SAMN05660742_102282
symbol: SEJ01628.1
gene_biotype: protein_coding
description:
  NagD protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: SAMN05660742_102283
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN05660742_102284
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05660742_102285
symbol: SEJ01738.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN05660742_102286
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN05660742_102290
symbol: SEJ01888.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05660742_102291
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN05660742_102294
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN05660742_10230
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN05660742_102300
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN05660742_10231
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05660742_10233
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN05660742_10235
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05660742_10242
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN05660742_10244
symbol: SEI95074.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05660742_10245
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN05660742_10246
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05660742_10247
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05660742_10249
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05660742_10250
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05660742_10251
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05660742_10258
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN05660742_10259
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN05660742_10260
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN05660742_10261
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN05660742_10265
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05660742_10267
symbol: SEI95725.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05660742_10269
symbol: SEI95771.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: SAMN05660742_10270
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: SAMN05660742_10271
symbol: SEI95818.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05660742_1029
symbol: SEI94135.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN05660742_10293
symbol: SEI96348.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05660742_10294
symbol: SEI96373.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05660742_10310
symbol: SEJ06109.1
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: SAMN05660742_103100
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05660742_103103
symbol: SEJ08438.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN05660742_103108
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN05660742_103109
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN05660742_103114
symbol: SEJ08744.1
gene_biotype: protein_coding
description:
  Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN05660742_103121
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05660742_103122
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05660742_103123
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05660742_103127
symbol: SEJ09122.1
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: SAMN05660742_103130
symbol: SEJ09190.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05660742_103132
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN05660742_103133
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05660742_103134
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN05660742_103137
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05660742_103138
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05660742_103139
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05660742_103140
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN05660742_103152
symbol: fabV
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+); Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA); Belongs to the TER reductase family.


ensembl_gene_id: SAMN05660742_103154
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN05660742_103156
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN05660742_10316
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN05660742_103162
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05660742_103163
symbol: rpsO
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05660742_103165
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05660742_103167
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05660742_103168
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05660742_103172
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05660742_103174
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05660742_10318
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05660742_103180
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN05660742_103181
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN05660742_103182
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN05660742_103184
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN05660742_10319
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05660742_103192
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN05660742_103195
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN05660742_103198
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN05660742_103200
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05660742_103207
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05660742_103208
symbol: SEJ11367.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN05660742_10321
symbol: SEJ06354.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05660742_103210
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05660742_103211
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05660742_103212
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05660742_103213
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05660742_103216
symbol: SEJ11535.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05660742_103217
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05660742_103221
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05660742_103222
symbol: SEJ11687.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN05660742_103223
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN05660742_103225
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05660742_103228
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05660742_103229
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN05660742_103230
symbol: SEJ11870.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05660742_103233
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN05660742_103238
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN05660742_10324
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN05660742_103240
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN05660742_103241
symbol: SEJ12127.1
gene_biotype: protein_coding
description:
  5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: SAMN05660742_103242
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN05660742_103247
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05660742_103249
symbol: SEJ12327.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05660742_103250
symbol: SEJ12348.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05660742_103251
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN05660742_103252
symbol: SEJ12404.1
gene_biotype: protein_coding
description:
  N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN05660742_103253
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05660742_103258
symbol: SEJ12581.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05660742_103260
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05660742_103261
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05660742_103266
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SAMN05660742_103269
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05660742_103271
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN05660742_103272
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05660742_103273
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05660742_103274
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN05660742_103276
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05660742_10329
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN05660742_10331
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05660742_10335
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN05660742_10336
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN05660742_10337
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN05660742_10339
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN05660742_10341
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05660742_10344
symbol: SEJ06919.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN05660742_10347
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05660742_10348
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05660742_10349
symbol: SEJ07042.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05660742_10350
symbol: SEJ07067.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN05660742_10353
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05660742_10355
symbol: SEJ07193.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN05660742_10356
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN05660742_10358
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05660742_10359
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN05660742_10362
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05660742_10363
symbol: SEJ07441.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN05660742_10365
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN05660742_10371
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05660742_10373
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN05660742_10377
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN05660742_10378
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05660742_1038
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05660742_10381
symbol: SEJ07848.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05660742_10384
symbol: SEJ07926.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05660742_10385
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05660742_1039
symbol: hfq
gene_biotype: protein_coding
description:
  Host factor-I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN05660742_10390
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN05660742_10391
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05660742_10392
symbol: SEJ08133.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN05660742_10393
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05660742_10397
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05660742_10398
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05660742_104111
symbol: SEJ19384.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05660742_10412
symbol: SEJ16410.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05660742_104124
symbol: pxpA
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN05660742_104129
symbol: SEJ19963.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05660742_104130
symbol: SEJ19992.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05660742_10414
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05660742_104142
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN05660742_104149
symbol: SEJ20529.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.


ensembl_gene_id: SAMN05660742_10415
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05660742_104150
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN05660742_104151
symbol: SEJ20584.1
gene_biotype: protein_coding
description:
  MFS transporter, SP family, arabinose:H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05660742_104166
symbol: rhaD
gene_biotype: protein_coding
description:
  Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.


ensembl_gene_id: SAMN05660742_104175
symbol: SEJ21205.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05660742_10419
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05660742_104200
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: SAMN05660742_104206
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: SAMN05660742_104208
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05660742_104209
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05660742_10421
symbol: SEJ16678.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05660742_104210
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05660742_104222
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05660742_104226
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN05660742_104229
symbol: SEJ22584.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05660742_10424
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05660742_10425
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05660742_10434
symbol: SEJ17055.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN05660742_1045
symbol: SEJ16243.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN05660742_10456
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN05660742_10460
symbol: SEJ17858.1
gene_biotype: protein_coding
description:
  Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05660742_10464
symbol: SEJ17981.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05660742_10470
symbol: SEJ18164.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05660742_10496
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN05660742_10497
symbol: pdxT
gene_biotype: protein_coding
description:
  5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN05660742_10511
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN05660742_105121
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN05660742_105125
symbol: SEJ28430.1
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN05660742_105130
symbol: SEJ28557.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05660742_105131
symbol: SEJ28578.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05660742_105134
symbol: SEJ28654.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: SAMN05660742_105136
symbol: citD
gene_biotype: protein_coding
description:
  Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.


ensembl_gene_id: SAMN05660742_105174
symbol: SEJ29519.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05660742_105200
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN05660742_105201
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN05660742_105202
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN05660742_105213
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN05660742_105221
symbol: SEJ30542.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05660742_105223
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN05660742_105230
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05660742_105231
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN05660742_105233
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05660742_105234
symbol: SEJ30868.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05660742_105235
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05660742_105236
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05660742_105237
symbol: SEJ30948.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN05660742_105239
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05660742_10529
symbol: SEJ26001.1
gene_biotype: protein_coding
description:
  D-alanine transaminase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction.


ensembl_gene_id: SAMN05660742_10532
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN05660742_10542
symbol: SEJ26367.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN05660742_10565
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN05660742_10566
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN05660742_10567
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05660742_10569
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05660742_10570
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN05660742_10573
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN05660742_10574
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: SAMN05660742_10575
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN05660742_10576
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05660742_1059
symbol: SEJ25470.1
gene_biotype: protein_coding
description:
  Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: SAMN05660742_10594
symbol: SEJ27551.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: SAMN05660742_10611
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN05660742_106121
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05660742_106123
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05660742_106124
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05660742_106125
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05660742_106128
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05660742_106129
symbol: rpsD
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05660742_106130
symbol: rpsK
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05660742_106131
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05660742_106132
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05660742_106134
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05660742_106135
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05660742_106136
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05660742_106138
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05660742_106139
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05660742_10614
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN05660742_106140
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05660742_106141
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05660742_106142
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05660742_106143
symbol: rplX
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05660742_106144
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05660742_106145
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05660742_106147
symbol: rplP
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05660742_106148
symbol: rpsC
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05660742_106149
symbol: rplV
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05660742_106150
symbol: rpsS
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05660742_106151
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05660742_106152
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05660742_106154
symbol: rplC
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05660742_106155
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05660742_106156
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05660742_106157
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN05660742_106158
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05660742_106159
symbol: rpsL
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05660742_106161
symbol: SEJ37419.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: SAMN05660742_106174
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05660742_106176
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05660742_106177
symbol: rplJ
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05660742_106179
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05660742_106180
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05660742_106181
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05660742_106182
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05660742_106193
symbol: SEJ38115.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05660742_106194
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN05660742_106195
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN05660742_106198
symbol: gltX
gene_biotype: protein_coding
description:
  Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05660742_106199
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN05660742_106200
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN05660742_106203
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05660742_106206
symbol: mcsB
gene_biotype: protein_coding
description:
  Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family.


ensembl_gene_id: SAMN05660742_106211
symbol: SEJ38567.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.


ensembl_gene_id: SAMN05660742_10622
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: SAMN05660742_10639
symbol: argD
gene_biotype: protein_coding
description:
  acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN05660742_10640
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05660742_10641
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN05660742_10642
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05660742_1066
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN05660742_1068
symbol: SEJ33582.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN05660742_1069
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05660742_107101
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05660742_107106
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05660742_107122
symbol: SEJ43206.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05660742_107127
symbol: nhaA
gene_biotype: protein_coding
description:
  Na+:H+ antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN05660742_107137
symbol: SEJ43486.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: SAMN05660742_10714
symbol: SEJ40838.1
gene_biotype: protein_coding
description:
  PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.8)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.8).


ensembl_gene_id: SAMN05660742_107166
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05660742_107167
symbol: SEJ43940.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN05660742_107168
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05660742_10717
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: SAMN05660742_10720
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN05660742_10722
symbol: SEJ41053.1
gene_biotype: protein_coding
description:
  Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: SAMN05660742_10723
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05660742_10735
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05660742_10744
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN05660742_10746
symbol: SEJ41649.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: SAMN05660742_10750
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN05660742_10751
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN05660742_10752
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN05660742_10759
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05660742_108112
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05660742_108122
symbol: SEJ47564.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN05660742_108127
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN05660742_108147
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN05660742_10818
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: SAMN05660742_1082
symbol: SEJ45067.1
gene_biotype: protein_coding
description:
  Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05660742_10830
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05660742_10879
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05660742_109104
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN05660742_109125
symbol: SEJ52621.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN05660742_109135
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: SAMN05660742_109138
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN05660742_10939
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05660742_10958
symbol: bioW
gene_biotype: protein_coding
description:
  6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP.


ensembl_gene_id: SAMN05660742_10959
symbol: SEJ51158.1
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: SAMN05660742_10973
symbol: SEJ51524.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: SAMN05660742_10974
symbol: SEJ51542.1
gene_biotype: protein_coding
description:
  Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: SAMN05660742_10979
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN05660742_10989
symbol: SEJ51870.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05660742_110111
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN05660742_110113
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN05660742_110114
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN05660742_110115
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05660742_110117
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05660742_110126
symbol: SEJ56866.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN05660742_11015
symbol: SEJ54426.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN05660742_11040
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN05660742_11063
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: SAMN05660742_11093
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05660742_11095
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05660742_11098
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN05660742_11099
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05660742_111109
symbol: SEJ60066.1
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation. Belongs to the RecU family.


ensembl_gene_id: SAMN05660742_111143
symbol: SEJ60501.1
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: SAMN05660742_11122
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05660742_11123
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05660742_11124
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN05660742_11125
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN05660742_11128
symbol: SEJ58969.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN05660742_11129
symbol: SEJ58991.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN05660742_11130
symbol: SEJ59012.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN05660742_11131
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN05660742_1114
symbol: SEJ58438.1
gene_biotype: protein_coding
description:
  Hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05660742_11167
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN05660742_11168
symbol: SEJ59628.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05660742_11177
symbol: SEJ59737.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05660742_112107
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN05660742_11211
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN05660742_112126
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05660742_112127
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05660742_112128
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05660742_112131
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN05660742_11214
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05660742_11220
symbol: SEJ62243.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05660742_11223
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05660742_11224
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN05660742_11225
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN05660742_11226
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN05660742_11227
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN05660742_11228
symbol: SEJ62416.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN05660742_1123
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN05660742_11231
symbol: SEJ62486.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN05660742_1124
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN05660742_11243
symbol: SEJ62724.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN05660742_11249
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN05660742_11250
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN05660742_11251
symbol: SEJ62910.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN05660742_11252
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN05660742_11253
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN05660742_11262
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN05660742_11264
symbol: SEJ63190.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05660742_11269
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05660742_11271
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05660742_11273
symbol: SEJ63379.1
gene_biotype: protein_coding
description:
  4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN05660742_11274
symbol: SEJ63396.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05660742_11276
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN05660742_11278
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN05660742_11279
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN05660742_1128
symbol: SEJ62034.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05660742_11281
symbol: SEJ63565.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: SAMN05660742_11286
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05660742_11287
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN05660742_11288
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05660742_11289
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05660742_11290
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05660742_11298
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05660742_113125
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN05660742_113126
symbol: SEJ68299.1
gene_biotype: protein_coding
description:
  Nucleoside transport protein; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: SAMN05660742_113127
symbol: SEJ68323.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05660742_11336
symbol: SEJ66614.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: SAMN05660742_11338
symbol: SEJ66649.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN05660742_11340
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05660742_11381
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05660742_11387
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN05660742_11428
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05660742_11434
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: SAMN05660742_11436
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05660742_11439
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05660742_11440
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05660742_11441
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: SAMN05660742_11443
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05660742_11448
symbol: SEJ70295.1
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.


ensembl_gene_id: SAMN05660742_11454
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN05660742_11455
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN05660742_11463
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SAMN05660742_11468
symbol: SEJ70624.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN05660742_11469
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05660742_11473
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05660742_11474
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05660742_11482
symbol: mqnA
gene_biotype: protein_coding
description:
  Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN05660742_11483
symbol: mqnC
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN05660742_115102
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05660742_115106
symbol: SEJ74094.1
gene_biotype: protein_coding
description:
  Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN05660742_115107
symbol: rpsR
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05660742_115112
symbol: SEJ74179.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN05660742_115115
symbol: SEJ74210.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05660742_115118
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05660742_11521
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05660742_11528
symbol: SEJ72941.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05660742_11535
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05660742_11538
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05660742_11540
symbol: SEJ73115.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05660742_11541
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05660742_11543
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05660742_11544
symbol: SEJ73188.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05660742_11547
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05660742_11548
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05660742_11549
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05660742_11559
symbol: SEJ73434.1
gene_biotype: protein_coding
description:
  Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05660742_1157
symbol: SEJ72530.1
gene_biotype: protein_coding
description:
  Taurine---2-oxoglutarate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660742_11573
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN05660742_11574
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: SAMN05660742_11589
symbol: SEJ73862.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05660742_11598
symbol: SEJ73978.1
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: SAMN05660742_11627
symbol: SEJ75539.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05660742_11648
symbol: SEJ75924.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05660742_11657
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05660742_11662
symbol: SEJ76267.1
gene_biotype: protein_coding
description:
  Phosphotransferase system, enzyme I, PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN05660742_11692
symbol: SEJ77131.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660742_117102
symbol: SEJ80264.1
gene_biotype: protein_coding
description:
  NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: SAMN05660742_117108
symbol: SEJ80347.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05660742_11720
symbol: SEJ78785.1
gene_biotype: protein_coding
description:
  Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05660742_11748
symbol: SEJ79295.1
gene_biotype: protein_coding
description:
  BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.


ensembl_gene_id: SAMN05660742_11749
symbol: SEJ79314.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase, beta subunit; Beta subunit of the biotin-dependent malonate decarboxylase multienzyme complex (EC 7.2.4.4). Acts as an integral membrane-bound carboxybiotin protein decarboxylase by releasing the carboxyl group of the carboxylated biotin carrier MADF. The free energy of the decarboxylation reaction is used to pump Na(+) out of the cell.


ensembl_gene_id: SAMN05660742_11861
symbol: SEJ82215.1
gene_biotype: protein_coding
description:
  Sn-glycerol 3-phosphate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05660742_11914
symbol: SEJ83799.1
gene_biotype: protein_coding
description:
  Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).


ensembl_gene_id: SAMN05660742_11927
symbol: SEJ84056.1
gene_biotype: protein_coding
description:
  O-6-methylguanine DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN05660742_11928
symbol: SEJ84070.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase.


ensembl_gene_id: SAMN05660742_11943
symbol: SEJ84261.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.


ensembl_gene_id: SAMN05660742_12010
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05660742_12011
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN05660742_12048
symbol: SEJ86113.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN05660742_12061
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05660742_12064
symbol: SEJ86307.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: SAMN05660742_1207
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05660742_12078
symbol: SEJ86534.1
gene_biotype: protein_coding
description:
  Beta-aspartyl-dipeptidase (metallo-type); Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: SAMN05660742_1208
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05660742_1209
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05660742_1211
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN05660742_12110
symbol: SEJ87353.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05660742_12111
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN05660742_12115
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN05660742_12117
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN05660742_12118
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN05660742_12122
symbol: SEJ87515.1
gene_biotype: protein_coding
description:
  Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN05660742_12131
symbol: SEJ87661.1
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: SAMN05660742_1214
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05660742_12152
symbol: SEJ87985.1
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05660742_12155
symbol: SEJ88028.1
gene_biotype: protein_coding
description:
  UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: SAMN05660742_1216
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05660742_12163
symbol: SEJ88126.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN05660742_12165
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN05660742_12166
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN05660742_1217
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05660742_12175
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN05660742_12251
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05660742_12282
symbol: SEJ89962.1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN05660742_12284
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05660742_12287
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN05660742_12292
symbol: SEJ90094.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase / fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: SAMN05660742_12320
symbol: SEJ90718.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05660742_12321
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN05660742_12322
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05660742_12324
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05660742_12325
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN05660742_12326
symbol: SEJ90775.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05660742_12327
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05660742_12334
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN05660742_12336
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05660742_12347
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05660742_12351
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN05660742_12352
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN05660742_12354
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05660742_12357
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05660742_12361
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN05660742_12362
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN05660742_12364
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN05660742_12370
symbol: SEJ91227.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05660742_12412
symbol: SEJ91787.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05660742_12419
symbol: SEJ91893.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: SAMN05660742_12427
symbol: SEJ91995.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.


ensembl_gene_id: SAMN05660742_12432
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN05660742_12458
symbol: SEJ92337.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E/beta-phosphoglucomutase family hydrolase.


ensembl_gene_id: SAMN05660742_12511
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05660742_12512
symbol: SEJ92730.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN05660742_12513
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05660742_12519
symbol: SEJ92798.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05660742_12521
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05660742_12525
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05660742_1253
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05660742_12533
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: SAMN05660742_12535
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: SAMN05660742_1254
symbol: SEJ92642.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05660742_12545
symbol: SEJ93117.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN05660742_1255
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05660742_1256
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN05660742_12640
symbol: SEJ93844.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.5).


ensembl_gene_id: SAMN05660742_12813
symbol: rbsD
gene_biotype: protein_coding
description:
  Ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.


ensembl_gene_id: SAMN05660742_12818
symbol: SEJ95448.1
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN05660742_1284
symbol: SEJ95277.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN05660742_12919
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: SAMN05660742_12933
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: SAMN05660742_1313
symbol: SEJ96657.1
gene_biotype: protein_coding
description:
  Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN05660742_1325
symbol: nanE
gene_biotype: protein_coding
description:
  N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: SAMN05660742_1328
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: SAMN05660742_13310
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05660742_13311
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05660742_1359
symbol: SEJ97666.1
gene_biotype: protein_coding
description:
  D-sorbitol 6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


# pathwayInfo

id: CL:1006
description: Mixed, incl. Lipoprotein metabolic process, and Radical SAM, alpha/beta horseshoe
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1006_Mixed,_incl._Lipoprotein_metabolic_process,_and_Radical_SAM,_alpha/beta_horseshoe


id: CL:1008
description: Mixed, incl. Thylakoid, and Regulation of pH
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1008_Mixed,_incl._Thylakoid,_and_Regulation_of_pH


id: CL:1026
description: Mostly uncharacterized, incl. Forkhead associated domain, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1026_Mostly_uncharacterized,_incl._Forkhead_associated_domain,_and_rRNA_methyltransferase_activity


id: CL:1028
description: Mixed, incl. Forkhead associated domain, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1028_Mixed,_incl._Forkhead_associated_domain,_and_rRNA_methyltransferase_activity


id: CL:1030
description: Mixed, incl. Forkhead associated domain, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1030_Mixed,_incl._Forkhead_associated_domain,_and_PASTA_domain


id: CL:1044
description: Mixed, incl. NusB family, and Methanogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1044_Mixed,_incl._NusB_family,_and_Methanogenesis


id: CL:1067
description: Mixed, incl. Exopeptidase activity, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1067_Mixed,_incl._Exopeptidase_activity,_and_Chromosome_segregation


id: CL:1068
description: Mostly uncharacterized, incl. Chromosome segregation, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1068_Mostly_uncharacterized,_incl._Chromosome_segregation,_and_DNA_catabolic_process


id: CL:1069
description: Mixed, incl. Chromosome segregation, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1069_Mixed,_incl._Chromosome_segregation,_and_DNA_catabolic_process


id: CL:1070
description: Mixed, incl. DNA catabolic process, and Isoprenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1070_Mixed,_incl._DNA_catabolic_process,_and_Isoprenoid_metabolic_process


id: CL:1072
description: Mixed, incl. Arginine binding, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1072_Mixed,_incl._Arginine_binding,_and_NAD+_kinase_activity


id: CL:1098
description: Mixed, incl. Chromosome partition, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1098_Mixed,_incl._Chromosome_partition,_and_CMP_kinase_activity


id: CL:1115
description: Mixed, incl. Acylphosphatase, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1115_Mixed,_incl._Acylphosphatase,_and_Lytic_endotransglycosylase_activity


id: CL:1130
description: Peptidase M24, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1130_Peptidase_M24,_and_EamA-like_transporter_family


id: CL:1144
description: Mixed, incl. DNA mismatch repair protein MutS, core, and FAD dependent protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1144_Mixed,_incl._DNA_mismatch_repair_protein_MutS,_core,_and_FAD_dependent_protein


id: CL:1155
description: Mixed, incl. Cellular modified amino acid biosynthetic process, and Coenzyme A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1155_Mixed,_incl._Cellular_modified_amino_acid_biosynthetic_process,_and_Coenzyme_A_metabolic_process


id: CL:1156
description: Pantothenate and CoA biosynthesis, and DNA-(apurinic or apyrimidinic site) endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1156_Pantothenate_and_CoA_biosynthesis,_and_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: CL:1157
description: Mixed, incl. Coenzyme A biosynthesis, and DNA-(apurinic or apyrimidinic site) endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1157_Mixed,_incl._Coenzyme_A_biosynthesis,_and_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: CL:1168
description: Pantothenate biosynthesis, and Coenzyme A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1168_Pantothenate_biosynthesis,_and_Coenzyme_A_metabolic_process


id: CL:1180
description: Folic acid biosynthetic process, and Alkaline phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1180_Folic_acid_biosynthetic_process,_and_Alkaline_phosphatase_activity


id: CL:119
description: Mixed, incl. Translation, and RNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:119_Mixed,_incl._Translation,_and_RNA_binding


id: CL:1199
description: Cellular amino acid metabolic process, and Vitamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1199_Cellular_amino_acid_metabolic_process,_and_Vitamin_binding


id: CL:120
description: Mixed, incl. Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:120_Mixed,_incl._Translation,_and_Ribosome_biogenesis


id: CL:1200
description: Cellular amino acid biosynthetic process, and Vitamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1200_Cellular_amino_acid_biosynthetic_process,_and_Vitamin_binding


id: CL:1201
description: Cellular amino acid biosynthetic process, and Vitamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1201_Cellular_amino_acid_biosynthetic_process,_and_Vitamin_binding


id: CL:1202
description: Alpha-amino acid biosynthetic process, and Vitamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1202_Alpha-amino_acid_biosynthetic_process,_and_Vitamin_binding


id: CL:1203
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1203_Alpha-amino_acid_biosynthetic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site

description:
  Alpha-amino acid biosynthetic process, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site


id: CL:1204
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1204_Mixed,_incl._Branched-chain_amino_acid_metabolic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain

description:
  Mixed, incl. Branched-chain amino acid metabolic process, and D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain


id: CL:1206
description: Branched-chain amino acid metabolic process, and Acetolactate synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1206_Branched-chain_amino_acid_metabolic_process,_and_Acetolactate_synthase_complex


id: CL:1208
description: Valine, leucine and isoleucine biosynthesis, and 2-isopropylmalate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1208_Valine,_leucine_and_isoleucine_biosynthesis,_and_2-isopropylmalate_synthase_activity


id: CL:121
description: Mixed, incl. Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:121_Mixed,_incl._Translation,_and_Ribosome_biogenesis


id: CL:1210
description: C5-Branched dibasic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1210_C5-Branched_dibasic_acid_metabolism


id: CL:122
description: Mixed, incl. Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:122_Mixed,_incl._Translation,_and_Ribosome_biogenesis


id: CL:1228
description: Isoleucine metabolic process, and Aminotransferase class IV
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1228_Isoleucine_metabolic_process,_and_Aminotransferase_class_IV


id: CL:123
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:123_Translation,_and_Ribosome_biogenesis


id: CL:124
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:124_Translation,_and_Ribosome_biogenesis


id: CL:1242
description: Threonine biosynthetic process, and Serine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1242_Threonine_biosynthetic_process,_and_Serine_biosynthesis


id: CL:126
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:126_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:1264
description: Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Glycerate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1264_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Glycerate_kinase


id: CL:1265
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1265_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site,_and_KDPG/KHG_aldolase

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site, and KDPG/KHG aldolase


id: CL:1266
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1266_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site,_and_Phosphoenolpyruvate_carboxykinase_activity

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site, and Phosphoenolpyruvate carboxykinase activity


id: CL:1279
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1279_KDPG/KHG_aldolase,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site_1

description:
  KDPG/KHG aldolase, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1


id: CL:1289
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1289_Glycerate_kinase,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site_1

description:
  Glycerate kinase, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1


id: CL:129
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:129_Ribosome,_and_Translation_regulator_activity


id: CL:1303
description: Lysine biosynthesis, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1303_Lysine_biosynthesis,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:1306
description: Lysine biosynthesis, and Positive regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1306_Lysine_biosynthesis,_and_Positive_regulation_of_molecular_function


id: CL:131
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:131_Ribosome,_and_Translation_regulator_activity


id: CL:134
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:134_Ribosome,_and_Translation_regulator_activity


id: CL:1343
description: Sulfur amino acid metabolic process, and Putative C-S lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1343_Sulfur_amino_acid_metabolic_process,_and_Putative_C-S_lyase


id: CL:1346
description: S-methyltransferase activity, and Homoserine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1346_S-methyltransferase_activity,_and_Homoserine_metabolic_process


id: CL:1363
description: Mixed, incl. Putative C-S lyase, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1363_Mixed,_incl._Putative_C-S_lyase,_and_Transsulfuration


id: CL:1379
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1379_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1381
description: Aromatic amino acid family metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1381_Aromatic_amino_acid_family_metabolic_process


id: CL:139
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:139_Ribosome,_and_Translation_regulator_activity


id: CL:1444
description: L-serine ammonia-lyase activity, and Endoribonuclease L-PSP
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1444_L-serine_ammonia-lyase_activity,_and_Endoribonuclease_L-PSP


id: CL:1457
description: Mixed, incl. Arginine biosynthesis, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1457_Mixed,_incl._Arginine_biosynthesis,_and_N-acetyltransferase_activity


id: CL:1458
description: Mixed, incl. Arginine biosynthesis, and Purine catabolism PurC-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1458_Mixed,_incl._Arginine_biosynthesis,_and_Purine_catabolism_PurC-like_domain


id: CL:1459
description: Arginine biosynthesis, and Alanine, aspartate and glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1459_Arginine_biosynthesis,_and_Alanine,_aspartate_and_glutamate_metabolism


id: CL:1462
description: Arginine biosynthesis, and Ornithine carbamoyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1462_Arginine_biosynthesis,_and_Ornithine_carbamoyltransferase


id: CL:147
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:147_Structural_constituent_of_ribosome


id: CL:149
description: Ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:149_Ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1492
description: Alanine, aspartate and glutamate metabolism, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1492_Alanine,_aspartate_and_glutamate_metabolism,_and_Carbon-nitrogen_hydrolase


id: CL:1494
description: Alanine metabolic process, and NAD/GMP synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1494_Alanine_metabolic_process,_and_NAD/GMP_synthase


id: CL:151
description: rRNA-binding, and Elongation factor Tu C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:151_rRNA-binding,_and_Elongation_factor_Tu_C-terminal_domain


id: CL:1522
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1522_Purine_catabolism_PurC-like_domain,_and_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity

description:
  Purine catabolism PurC-like domain, and adenosylmethionine-8-amino-7-oxononanoate transaminase activity


id: CL:1531
description: N-acetyltransferase activity, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1531_N-acetyltransferase_activity,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:1533
description: N-acetyltransferase activity, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1533_N-acetyltransferase_activity,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:1534
description: N-acetyltransferase activity, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1534_N-acetyltransferase_activity,_and_Cupin_2,_conserved_barrel


id: CL:1536
description: Mixed, incl. Acetyltransferase (GNAT) family, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1536_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Acetyltransferase_(GNAT)_domain


id: CL:1556
description: tRNA threonylcarbamoyladenosine modification, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1556_tRNA_threonylcarbamoyladenosine_modification,_and_Telomere_recombination


id: CL:1576
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Heterocycle catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1576_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Heterocycle_catabolic_process


id: CL:1577
description: Mixed, incl. Nucleoside monophosphate biosynthetic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1577_Mixed,_incl._Nucleoside_monophosphate_biosynthetic_process,_and_Glycine_metabolic_process


id: CL:1578
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1578_Mixed,_incl._Ribonucleoside_monophosphate_metabolic_process,_and_Glutamine_family_amino_acid_biosynthetic_process

description:
  Mixed, incl. Ribonucleoside monophosphate metabolic process, and Glutamine family amino acid biosynthetic process


id: CL:1579
description: Mixed, incl. Ribonucleoside monophosphate metabolic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1579_Mixed,_incl._Ribonucleoside_monophosphate_metabolic_process,_and_Nucleobase_transport


id: CL:1580
description: Ribonucleoside monophosphate biosynthetic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1580_Ribonucleoside_monophosphate_biosynthetic_process,_and_Nucleobase_transport


id: CL:1582
description: Purine nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1582_Purine_nucleoside_monophosphate_metabolic_process


id: CL:1586
description: Purine nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1586_Purine_nucleoside_monophosphate_biosynthetic_process


id: CL:1626
description: De novo UMP biosynthetic process, and Allantoin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1626_De_novo_UMP_biosynthetic_process,_and_Allantoin_metabolic_process


id: CL:1652
description: Allantoin metabolic process, and Pyrimidine-containing compound transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1652_Allantoin_metabolic_process,_and_Pyrimidine-containing_compound_transmembrane_transport


id: CL:1663
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1663_Mixed,_incl._glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Glutamate_biosynthetic_process

description:
  Mixed, incl. glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Glutamate biosynthetic process


id: CL:1665
description: Glutamate biosynthetic process, and Dihydroprymidine dehydrogenase domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1665_Glutamate_biosynthetic_process,_and_Dihydroprymidine_dehydrogenase_domain_II


id: CL:1677
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and CTP synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1677_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_CTP_synthase


id: CL:1692
description: Mixed, incl. PP-loop family, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1692_Mixed,_incl._PP-loop_family,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:1703
description: Mixed, incl. Glycine metabolic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1703_Mixed,_incl._Glycine_metabolic_process,_and_One-carbon_metabolic_process


id: CL:1704
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1704_Mixed,_incl._Tetrahydrofolate_metabolic_process,_and_Deoxyribonucleoside_monophosphate_metabolic_process

description:
  Mixed, incl. Tetrahydrofolate metabolic process, and Deoxyribonucleoside monophosphate metabolic process


id: CL:1706
description: Mixed, incl. Uracil phosphoribosyltransferase activity, and MafB19-like deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1706_Mixed,_incl._Uracil_phosphoribosyltransferase_activity,_and_MafB19-like_deaminase


id: CL:171
description: Large ribosomal subunit, and RNA-binding S4 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:171_Large_ribosomal_subunit,_and_RNA-binding_S4_domain


id: CL:1720
description: Tetrahydrofolate interconversion, and Homocysteine-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1720_Tetrahydrofolate_interconversion,_and_Homocysteine-binding_domain


id: CL:1732
description: Glycine catabolic process, and HydE/PylB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1732_Glycine_catabolic_process,_and_HydE/PylB-like


id: CL:1748
description: Mixed, incl. Nucleobase-containing compound catabolic process, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1748_Mixed,_incl._Nucleobase-containing_compound_catabolic_process,_and_Polyamine_metabolic_process


id: CL:1749
description: Mixed, incl. Polyamine metabolic process, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1749_Mixed,_incl._Polyamine_metabolic_process,_and_Phosphorylase_superfamily


id: CL:1750
description: Polyamine metabolic process, and Methylthioadenosine phosphorylase (MTAP)
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1750_Polyamine_metabolic_process,_and_Methylthioadenosine_phosphorylase_(MTAP)


id: CL:1766
description: Phosphorylase superfamily, and Nucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1766_Phosphorylase_superfamily,_and_Nucleotide_catabolic_process


id: CL:1781
description: Pyrimidine nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1781_Pyrimidine_nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:1797
description: Mixed, incl. Oxidative phosphorylation, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1797_Mixed,_incl._Oxidative_phosphorylation,_and_Butanoate_metabolism


id: CL:1799
description: Mixed, incl. Oxidative phosphorylation, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1799_Mixed,_incl._Oxidative_phosphorylation,_and_Butanoate_metabolism


id: CL:1800
description: Mixed, incl. Butanoate metabolism, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1800_Mixed,_incl._Butanoate_metabolism,_and_Propanoate_metabolism


id: CL:1801
description: Mixed, incl. Citrate cycle (TCA cycle), and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1801_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:1802
description: Citrate cycle (TCA cycle), and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1802_Citrate_cycle_(TCA_cycle),_and_Alpha-helical_ferredoxin


id: CL:1803
description: Citrate cycle (TCA cycle), and L-lactate/malate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1803_Citrate_cycle_(TCA_cycle),_and_L-lactate/malate_dehydrogenase


id: CL:1808
description: CoA-ligase, and 2Fe-2S iron-sulfur cluster binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1808_CoA-ligase,_and_2Fe-2S_iron-sulfur_cluster_binding_domain


id: CL:1827
description: Mixed, incl. Pyruvate ferredoxin/flavodoxin oxidoreductase, and Oxalate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1827_Mixed,_incl._Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_Oxalate_catabolic_process


id: CL:1831
description: Pyruvate:ferredoxin oxidoreductase, core domain II, and Oxalate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1831_Pyruvate:ferredoxin_oxidoreductase,_core_domain_II,_and_Oxalate_catabolic_process


id: CL:1849
description: LUD domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1849_LUD_domain,_and_Glycolate_oxidase_complex


id: CL:1867
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1867_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Decarboxylation-driven_active_transmembrane_transporter_activity

description:
  Mixed, incl. Valine, leucine and isoleucine degradation, and Decarboxylation-driven active transmembrane transporter activity


id: CL:1870
description: Valine, leucine and isoleucine degradation, and SIMIBI class G3E GTPase, ArgK/MeaB
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1870_Valine,_leucine_and_isoleucine_degradation,_and_SIMIBI_class_G3E_GTPase,_ArgK/MeaB


id: CL:1872
description: Methylmalonyl-CoA mutase, alpha chain, catalytic, and Alkaloid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1872_Methylmalonyl-CoA_mutase,_alpha_chain,_catalytic,_and_Alkaloid_metabolic_process


id: CL:1893
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1893_Mixed,_incl._Decarboxylation-driven_active_transmembrane_transporter_activity,_and_Biotin-protein_ligase_activity

description:
  Mixed, incl. Decarboxylation-driven active transmembrane transporter activity, and Biotin-protein ligase activity


id: CL:1894
description: acetyl-CoA carboxylase complex, and Biotin-protein ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1894_acetyl-CoA_carboxylase_complex,_and_Biotin-protein_ligase_activity


id: CL:1909
description: Biotin-binding site, and Na+-transporting oxaloacetate decarboxylase beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1909_Biotin-binding_site,_and_Na+-transporting_oxaloacetate_decarboxylase_beta_subunit


id: CL:1918
description: Mixed, incl. Fatty acid metabolism, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1918_Mixed,_incl._Fatty_acid_metabolism,_and_Electron_transfer_flavoprotein_domain


id: CL:1919
description: Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1919_Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1922
description: Fatty acid biosynthesis, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1922_Fatty_acid_biosynthesis,_and_Nitronate_monooxygenase


id: CL:1925
description: Fatty acid synthase activity, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1925_Fatty_acid_synthase_activity,_and_Biotin


id: CL:1926
description: Fatty acid synthase activity, and Short chain dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1926_Fatty_acid_synthase_activity,_and_Short_chain_dehydrogenase


id: CL:1935
description: Fatty acid synthase activity, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1935_Fatty_acid_synthase_activity,_and_Biotin


id: CL:1953
description: Short-chain dehydrogenase/reductase SDR, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1953_Short-chain_dehydrogenase/reductase_SDR,_and_Crp-like_helix-turn-helix_domain


id: CL:1963
description: Mixed, incl. Electron transfer flavoprotein domain, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1963_Mixed,_incl._Electron_transfer_flavoprotein_domain,_and_Coenzyme_A_transferase


id: CL:1965
description: Electron transfer flavoprotein domain, and Fatty acid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1965_Electron_transfer_flavoprotein_domain,_and_Fatty_acid_degradation


id: CL:1991
description: Oxidative phosphorylation, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1991_Oxidative_phosphorylation,_and_Glucose_metabolic_process


id: CL:1992
description: Oxidative phosphorylation, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1992_Oxidative_phosphorylation,_and_4Fe-4S_dicluster_domain


id: CL:1993
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1993_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site

description:
  Oxidoreductase activity, acting on NAD(P)H, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site


id: CL:1994
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1994_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Anaerobic_electron_transport_chain

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Anaerobic electron transport chain


id: CL:1995
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1995_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Anaerobic_electron_transport_chain

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Anaerobic electron transport chain


id: CL:1997
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:1997_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_NuoE_domain

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and NuoE domain


id: CL:203
description: L28p-like, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:203_L28p-like,_and_Large_ribosomal_subunit


id: CL:2047
description: NADH dehydrogenase activity, and Anaerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2047_NADH_dehydrogenase_activity,_and_Anaerobic_electron_transport_chain


id: CL:2062
description: Formate dehydrogenase complex, and NADH-quinone oxidoreductase, chain I
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2062_Formate_dehydrogenase_complex,_and_NADH-quinone_oxidoreductase,_chain_I


id: CL:2072
description: Mixed, incl. Iron hydrogenase, subset, and Domain of unknown function (DUF362)
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2072_Mixed,_incl._Iron_hydrogenase,_subset,_and_Domain_of_unknown_function_(DUF362)


id: CL:2081
description: Alternative NADH dehydrogenase, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2081_Alternative_NADH_dehydrogenase,_and_Methyltransferase_domain


id: CL:2090
description: Cytochrome complex, and Oligopeptide transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2090_Cytochrome_complex,_and_Oligopeptide_transmembrane_transport


id: CL:2100
description: Organic radical, and Organic radical enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2100_Organic_radical,_and_Organic_radical_enzyme_activase


id: CL:2121
description: Mixed, incl. MerR-type HTH domain, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2121_Mixed,_incl._MerR-type_HTH_domain,_and_AhpD-like


id: CL:2133
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2133_Mixed,_incl._Biotin_metabolic_process,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily

description:
  Mixed, incl. Biotin metabolic process, and S-adenosyl-L-methionine-dependent methyltransferase superfamily


id: CL:2134
description: Mixed, incl. Biotin metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2134_Mixed,_incl._Biotin_metabolic_process,_and_Methyltransferase_type_11


id: CL:2135
description: Biotin metabolic process, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2135_Biotin_metabolic_process,_and_Serine_aminopeptidase,_S33


id: CL:2157
description: Methyltransferase type 11, and AttH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2157_Methyltransferase_type_11,_and_AttH_domain


id: CL:217
description: Mixed, incl. UTP metabolic process, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:217_Mixed,_incl._UTP_metabolic_process,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:2171
description: Mixed, incl. ABC1 atypical kinase-like domain, and DNA methylation on cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2171_Mixed,_incl._ABC1_atypical_kinase-like_domain,_and_DNA_methylation_on_cytosine


id: CL:2193
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2193_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2194
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2194_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2195
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2195_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2196
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2196_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2197
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2197_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2198
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2198_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2200
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2200_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2202
description: Polyketide sugar unit biosynthesis, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2202_Polyketide_sugar_unit_biosynthesis,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:2204
description: Mixed, incl. NAD dependent epimerase/dehydratase family, and dTDP-4-dehydrorhamnose 3,5-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2204_Mixed,_incl._NAD_dependent_epimerase/dehydratase_family,_and_dTDP-4-dehydrorhamnose_3,5-epimerase


id: CL:2216
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2216_Polyketide_sugar_unit_biosynthesis


id: CL:2230
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2230_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferase_family_4


id: CL:2233
description: Mixed, incl. Guanylyltransferase activity, and Macromolecule transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2233_Mixed,_incl._Guanylyltransferase_activity,_and_Macromolecule_transmembrane_transporter_activity


id: CL:2260
description: Mixed, incl. Glycogen metabolic process, and Phosphoglucosamine mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2260_Mixed,_incl._Glycogen_metabolic_process,_and_Phosphoglucosamine_mutase_activity


id: CL:2286
description: Mixed, incl. charged-tRNA amino acid modification, and Acylneuraminate cytidylyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2286_Mixed,_incl._charged-tRNA_amino_acid_modification,_and_Acylneuraminate_cytidylyltransferase


id: CL:2289
description: Mixed, incl. Acylneuraminate cytidylyltransferase, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2289_Mixed,_incl._Acylneuraminate_cytidylyltransferase,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:230
description: Structural constituent of ribosome, and EFG, domain V
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:230_Structural_constituent_of_ribosome,_and_EFG,_domain_V


id: CL:2311
description: Protein glycosylation, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2311_Protein_glycosylation,_and_NodB_homology_domain


id: CL:232
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:232_Structural_constituent_of_ribosome


id: CL:2331
description: Lipopolysaccharide biosynthesis, and WlaTC/HtrL glycosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2331_Lipopolysaccharide_biosynthesis,_and_WlaTC/HtrL_glycosyltransferase


id: CL:2335
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2335_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:234
description: Mixed, incl. KOW (Kyprides, Ouzounis, Woese) motif., and Ribosomal protein L7Ae/L30e/S12e/Gadd45
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:234_Mixed,_incl._KOW_(Kyprides,_Ouzounis,_Woese)_motif.,_and_Ribosomal_protein_L7Ae/L30e/S12e/Gadd45


id: CL:2360
description: Mixed, incl. GmhA/DiaA, and HAD-superfamily hydrolase,subfamily IIIA
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2360_Mixed,_incl._GmhA/DiaA,_and_HAD-superfamily_hydrolase,subfamily_IIIA


id: CL:2371
description: Mixed, incl. Glycosyl transferase family 8 C-terminal, and WlaTC/HtrL glycosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2371_Mixed,_incl._Glycosyl_transferase_family_8_C-terminal,_and_WlaTC/HtrL_glycosyltransferase


id: CL:2374
description: Glycosyl transferase family 8 C-terminal, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2374_Glycosyl_transferase_family_8_C-terminal,_and_Glycosyl_transferase,_family_9


id: CL:2387
description: Mixed, incl. Alanine catabolic process, and WlaTC/HtrL glycosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2387_Mixed,_incl._Alanine_catabolic_process,_and_WlaTC/HtrL_glycosyltransferase


id: CL:2397
description: Mixed, incl. Chlorophyll metabolic process, and WxcM-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2397_Mixed,_incl._Chlorophyll_metabolic_process,_and_WxcM-like,_C-terminal


id: CL:2415
description: Mixed, incl. Riboflavin metabolic process, and Amino acid/polyamine transporter I
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2415_Mixed,_incl._Riboflavin_metabolic_process,_and_Amino_acid/polyamine_transporter_I


id: CL:2417
description: Mixed, incl. Amino acid/polyamine transporter I, and Glycosyl hydrolase, all-beta
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2417_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Glycosyl_hydrolase,_all-beta


id: CL:2420
description: Amino acid/polyamine transporter I, and Alpha-amylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2420_Amino_acid/polyamine_transporter_I,_and_Alpha-amylase_domain


id: CL:2422
description: Alpha-amylase domain, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2422_Alpha-amylase_domain,_and_Amino_acid_permease


id: CL:2446
description: Mixed, incl. Aconitase C-terminal domain, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2446_Mixed,_incl._Aconitase_C-terminal_domain,_and_Enoyl-CoA_hydratase/isomerase


id: CL:2464
description: Riboflavin metabolic process, and Sucrose-6F-phosphate phosphohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2464_Riboflavin_metabolic_process,_and_Sucrose-6F-phosphate_phosphohydrolase


id: CL:2468
description: Riboflavin biosynthesis, and ATP synthase subunit alpha, N-terminal domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2468_Riboflavin_biosynthesis,_and_ATP_synthase_subunit_alpha,_N-terminal_domain-like_superfamily


id: CL:2480
description: Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2480_Haloacid_dehalogenase-like_hydrolase


id: CL:2500
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2500_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Pyridine_nucleotide_biosynthetic_process

description:
  Mixed, incl. Helix-turn-helix XRE-family like proteins, and Pyridine nucleotide biosynthetic process


id: CL:2502
description: Helix-turn-helix XRE-family like proteins, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2502_Helix-turn-helix_XRE-family_like_proteins,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:2503
description: Helix-turn-helix XRE-family like proteins, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2503_Helix-turn-helix_XRE-family_like_proteins,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:2504
description: Helix-turn-helix XRE-family like proteins, and Pyridine nucleotide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2504_Helix-turn-helix_XRE-family_like_proteins,_and_Pyridine_nucleotide_biosynthesis


id: CL:2506
description: Helix-turn-helix XRE-family like proteins, and Pyridine nucleotide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2506_Helix-turn-helix_XRE-family_like_proteins,_and_Pyridine_nucleotide_biosynthesis


id: CL:2509
description: Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2509_Helix-turn-helix_XRE-family_like_proteins


id: CL:2510
description: Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2510_Helix-turn-helix_XRE-family_like_proteins


id: CL:2521
description: Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2521_Helix-turn-helix_XRE-family_like_proteins


id: CL:2537
description: Mixed, incl. Pyridine nucleotide biosynthesis, and Quinolinate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2537_Mixed,_incl._Pyridine_nucleotide_biosynthesis,_and_Quinolinate_metabolic_process


id: CL:2540
description: Pyridine nucleotide biosynthetic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2540_Pyridine_nucleotide_biosynthetic_process,_and_NUDIX_domain


id: CL:2567
description: Mixed, incl. Ribbon-helix-helix, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2567_Mixed,_incl._Ribbon-helix-helix,_and_mRNA_binding


id: CL:2577
description: NAD biosynthetic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2577_NAD_biosynthetic_process,_and_RNA_capping


id: CL:2596
description: Mixed, incl. ComA-like, MBL domain, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2596_Mixed,_incl._ComA-like,_MBL_domain,_and_mRNA_interferase_PemK-like


id: CL:2598
description: Mixed, incl. mRNA interferase PemK-like, and Ribbon-helix-helix protein, CopG
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2598_Mixed,_incl._mRNA_interferase_PemK-like,_and_Ribbon-helix-helix_protein,_CopG


id: CL:2624
description: Phosphotransferase system (PTS), and RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2624_Phosphotransferase_system_(PTS),_and_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:2625
description: Phosphotransferase system (PTS), and RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2625_Phosphotransferase_system_(PTS),_and_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:2627
description: Ascorbate and aldarate metabolism, and Phosphotransferase system
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2627_Ascorbate_and_aldarate_metabolism,_and_Phosphotransferase_system


id: CL:2628
description: Mixed, incl. Phosphotransferase system, and Mga helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2628_Mixed,_incl._Phosphotransferase_system,_and_Mga_helix-turn-helix_domain


id: CL:2631
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2631_Mixed,_incl._Phosphotransferase_system,_EIIB_component,_type_2,_and_Phosphotransferase_system,_IIA_component_fructose_subfamily

description:
  Mixed, incl. Phosphotransferase system, EIIB component, type 2, and Phosphotransferase system, IIA component fructose subfamily


id: CL:2632
description: Phosphotransferase system, EIIB component, type 2, and Lactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2632_Phosphotransferase_system,_EIIB_component,_type_2,_and_Lactose_metabolism


id: CL:2634
description: Mixed, incl. Mga helix-turn-helix domain, and Hexose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2634_Mixed,_incl._Mga_helix-turn-helix_domain,_and_Hexose_transmembrane_transport


id: CL:2635
description: Mixed, incl. Hexose transmembrane transport, and Lactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2635_Mixed,_incl._Hexose_transmembrane_transport,_and_Lactose_metabolism


id: CL:2639
description: Hexose transmembrane transport, and Lactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2639_Hexose_transmembrane_transport,_and_Lactose_metabolism


id: CL:2654
description: Mga helix-turn-helix domain, and Mannitol transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2654_Mga_helix-turn-helix_domain,_and_Mannitol_transmembrane_transport


id: CL:2673
description: Mixed, incl. Fructose-bisphosphate aldolase class-II, and Hexose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2673_Mixed,_incl._Fructose-bisphosphate_aldolase_class-II,_and_Hexose_transmembrane_transport


id: CL:2690
description: Mixed, incl. Phosphotransferase system, EIIC component, type 1, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2690_Mixed,_incl._Phosphotransferase_system,_EIIC_component,_type_1,_and_ROK_family


id: CL:2692
description: Phosphotransferase system, EIIC component, type 1, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2692_Phosphotransferase_system,_EIIC_component,_type_1,_and_ROK_family


id: CL:2694
description: Phosphotransferase system, EIIC component, type 1, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2694_Phosphotransferase_system,_EIIC_component,_type_1,_and_ROK_family


id: CL:2698
description: Phosphotransferase system, sugar-specific permease EIIA type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2698_Phosphotransferase_system,_sugar-specific_permease_EIIA_type_1


id: CL:2732
description: Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2732_Ascorbate_and_aldarate_metabolism


id: CL:2734
description: Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2734_Ascorbate_and_aldarate_metabolism


id: CL:2736
description: Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2736_Ascorbate_and_aldarate_metabolism


id: CL:2772
description: PTS system fructose IIA component, and PTS system sorbose-specific iic component
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2772_PTS_system_fructose_IIA_component,_and_PTS_system_sorbose-specific_iic_component


id: CL:2774
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2774_Mixed,_incl._PTS_system_sorbose-specific_iic_component,_and_PTS_system_sorbose_subfamily_IIB_component

description:
  Mixed, incl. PTS system sorbose-specific iic component, and PTS system sorbose subfamily IIB component


id: CL:2775
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2775_Mixed,_incl._PTS_system_sorbose-specific_iic_component,_and_PTS_system_sorbose_subfamily_IIB_component

description:
  Mixed, incl. PTS system sorbose-specific iic component, and PTS system sorbose subfamily IIB component


id: CL:2777
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2777_Mixed,_incl._PTS_system_sorbose-specific_iic_component,_and_PTS_system_sorbose_subfamily_IIB_component

description:
  Mixed, incl. PTS system sorbose-specific iic component, and PTS system sorbose subfamily IIB component


id: CL:2779
description: Mixed, incl. D-glucosamine PTS permease activity, and PTS system sorbose subfamily IIB component
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2779_Mixed,_incl._D-glucosamine_PTS_permease_activity,_and_PTS_system_sorbose_subfamily_IIB_component


id: CL:2807
description: Mixed, incl. D-glucosamine PTS permease activity, and PTS system sorbose subfamily IIB component
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2807_Mixed,_incl._D-glucosamine_PTS_permease_activity,_and_PTS_system_sorbose_subfamily_IIB_component


id: CL:2822
description: Mixed, incl. D-glucosamine PTS permease activity, and PTS system sorbose subfamily IIB component
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2822_Mixed,_incl._D-glucosamine_PTS_permease_activity,_and_PTS_system_sorbose_subfamily_IIB_component


id: CL:2847
description: PTS system fructose IIA component
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2847_PTS_system_fructose_IIA_component


id: CL:2852
description: Sigma-54, DNA binding domain, and PTS system fructose IIA component
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2852_Sigma-54,_DNA_binding_domain,_and_PTS_system_fructose_IIA_component


id: CL:2874
description: Galactitol permease IIC component, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2874_Galactitol_permease_IIC_component,_and_Galactose_metabolism


id: CL:2876
description: Galactitol permease IIC component, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2876_Galactitol_permease_IIC_component,_and_Galactose_metabolism


id: CL:2878
description: Galactitol permease IIC component, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2878_Galactitol_permease_IIC_component,_and_Galactose_metabolism


id: CL:288
description: Mixed, incl. Ribosomal small subunit biogenesis, and PUA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:288_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_PUA_domain_superfamily


id: CL:2919
description: Mixed, incl. DeoR-like helix-turn-helix domain, and Galactitol permease IIC component
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2919_Mixed,_incl._DeoR-like_helix-turn-helix_domain,_and_Galactitol_permease_IIC_component


id: CL:2928
description: Mixed, incl. KDPG/KHG aldolase, and D-galactonate dehydratase DgoD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2928_Mixed,_incl._KDPG/KHG_aldolase,_and_D-galactonate_dehydratase_DgoD-like


id: CL:2940
description: Starch and sucrose metabolism, and Ribose/Galactose Isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2940_Starch_and_sucrose_metabolism,_and_Ribose/Galactose_Isomerase


id: CL:2943
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2943_Mixed,_incl._Phosphotransferase_system,_cellobiose-type_IIC_component,_and_Phosphotransferase_system,_EIIB_component,_type_3

description:
  Mixed, incl. Phosphotransferase system, cellobiose-type IIC component, and Phosphotransferase system, EIIB component, type 3


id: CL:2945
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2945_Mixed,_incl._Phosphotransferase_system,_cellobiose-type_IIC_component,_and_Phosphotransferase_system,_EIIB_component,_type_3

description:
  Mixed, incl. Phosphotransferase system, cellobiose-type IIC component, and Phosphotransferase system, EIIB component, type 3


id: CL:2965
description: Mixed, incl. YdjC-like protein, and Family 4 glycosyl hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2965_Mixed,_incl._YdjC-like_protein,_and_Family_4_glycosyl_hydrolase


id: CL:2975
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2975_Glycosyl_hydrolases_family_1,_N-terminal_conserved_site,_and_Phosphotransferase_system,_cellobiose-type_IIC_component

description:
  Glycosyl hydrolases family 1, N-terminal conserved site, and Phosphotransferase system, cellobiose-type IIC component


id: CL:2992
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:2992_Mixed,_incl._Cellulase_(glycosyl_hydrolase_family_5),_and_Phosphotransferase_system,_cellobiose-type_IIC_component

description:
  Mixed, incl. Cellulase (glycosyl hydrolase family 5), and Phosphotransferase system, cellobiose-type IIC component


id: CL:3003
description: Mixed, incl. Ribose/Galactose Isomerase, and Cellulase (glycosyl hydrolase family 5)
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3003_Mixed,_incl._Ribose/Galactose_Isomerase,_and_Cellulase_(glycosyl_hydrolase_family_5)


id: CL:3017
description: Lactone catabolic process, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3017_Lactone_catabolic_process,_and_Ascorbate_and_aldarate_metabolism


id: CL:3036
description: Carbohydrate metabolic process, and Alcohol dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3036_Carbohydrate_metabolic_process,_and_Alcohol_dehydrogenase-like,_C-terminal


id: CL:3037
description: Carbon metabolism, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3037_Carbon_metabolism,_and_Pentose_and_glucuronate_interconversions


id: CL:3039
description: Pentose phosphate pathway, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3039_Pentose_phosphate_pathway,_and_Pentose_and_glucuronate_interconversions


id: CL:3040
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3040_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:3041
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3041_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:3042
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3042_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:3044
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3044_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:3046
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3046_Glycolytic_process,_and_NADPH_regeneration


id: CL:3048
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3048_Glycolysis,_and_NADPH_regeneration


id: CL:3049
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3049_Glycolysis,_and_NADPH_regeneration


id: CL:3052
description: Glycolysis, and Fructose-bisphosphate aldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3052_Glycolysis,_and_Fructose-bisphosphate_aldolase_activity


id: CL:3057
description: Glycolysis, and Transketolase or transaldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3057_Glycolysis,_and_Transketolase_or_transaldolase_activity


id: CL:3098
description: Mixed, incl. Ribose 5-phosphate isomerase B, and Transketolase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3098_Mixed,_incl._Ribose_5-phosphate_isomerase_B,_and_Transketolase,_C-terminal_domain


id: CL:3114
description: Mixed, incl. Transketolase, C-terminal domain, and Carbohydrate kinase, FGGY, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3114_Mixed,_incl._Transketolase,_C-terminal_domain,_and_Carbohydrate_kinase,_FGGY,_conserved_site


id: CL:3130
description: Mixed, incl. Zinc-binding dehydrogenase, and Methanogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3130_Mixed,_incl._Zinc-binding_dehydrogenase,_and_Methanogenesis


id: CL:314
description: Mixed, incl. RNA helicase activity, and RNA pseudouridylate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:314_Mixed,_incl._RNA_helicase_activity,_and_RNA_pseudouridylate_synthase


id: CL:315
description: Mixed, incl. RNA pseudouridylate synthase, and ATP-dependent RNA helicase DEAD-box, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:315_Mixed,_incl._RNA_pseudouridylate_synthase,_and_ATP-dependent_RNA_helicase_DEAD-box,_conserved_site


id: CL:3153
description: Mixed, incl. YjbQ-like superfamily, and Triosephosphate isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3153_Mixed,_incl._YjbQ-like_superfamily,_and_Triosephosphate_isomerase


id: CL:3162
description: Mixed, incl. 3-hexulose-6-phosphate isomerase, and Orotidine 5-phosphate decarboxylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3162_Mixed,_incl._3-hexulose-6-phosphate_isomerase,_and_Orotidine_5-phosphate_decarboxylase_domain


id: CL:3164
description: Mixed, incl. 3-hexulose-6-phosphate isomerase, and Orotidine 5-phosphate decarboxylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3164_Mixed,_incl._3-hexulose-6-phosphate_isomerase,_and_Orotidine_5-phosphate_decarboxylase_domain


id: CL:317
description: Mixed, incl. ATP-dependent RNA helicase DEAD-box, conserved site, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:317_Mixed,_incl._ATP-dependent_RNA_helicase_DEAD-box,_conserved_site,_and_Peptidyl-proline_modification


id: CL:3185
description: Mixed, incl. Pentose and glucuronate interconversions, and RuBisCO
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3185_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_RuBisCO


id: CL:3186
description: Mixed, incl. Class II aldolase/adducin N-terminal, and Arabinose catabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3186_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_Arabinose_catabolism


id: CL:3188
description: Class II aldolase/adducin N-terminal, and Arabinose catabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3188_Class_II_aldolase/adducin_N-terminal,_and_Arabinose_catabolism


id: CL:3189
description: Arabinose catabolism, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3189_Arabinose_catabolism,_and_Class_II_aldolase/adducin_N-terminal


id: CL:3191
description: Arabinose catabolism, and L-ribulose-5-phosphate 4-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3191_Arabinose_catabolism,_and_L-ribulose-5-phosphate_4-epimerase


id: CL:3210
description: RuBisCO, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3210_RuBisCO,_and_Class_II_aldolase/adducin_N-terminal


id: CL:3231
description: Rhamnose metabolism, and Alpha-L-rhamnosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3231_Rhamnose_metabolism,_and_Alpha-L-rhamnosidase


id: CL:3247
description: Mixed, incl. Helix-turn-helix protein RpiR, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3247_Mixed,_incl._Helix-turn-helix_protein_RpiR,_and_Amino_sugar_metabolic_process


id: CL:3249
description: Mixed, incl. Helix-turn-helix protein RpiR, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3249_Mixed,_incl._Helix-turn-helix_protein_RpiR,_and_Amino_sugar_metabolic_process


id: CL:3251
description: Helix-turn-helix protein RpiR, and N-acetylneuraminate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3251_Helix-turn-helix_protein_RpiR,_and_N-acetylneuraminate_metabolic_process


id: CL:3253
description: N-acetylneuraminate metabolic process, and RpiR-like, SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3253_N-acetylneuraminate_metabolic_process,_and_RpiR-like,_SIS_domain


id: CL:3296
description: Mixed, incl. Small molecule catabolic process, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3296_Mixed,_incl._Small_molecule_catabolic_process,_and_Aldo/keto_reductase_family


id: CL:3297
description: Mixed, incl. Inositol catabolic process, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3297_Mixed,_incl._Inositol_catabolic_process,_and_Aldehyde_dehydrogenase_domain


id: CL:3298
description: Mixed, incl. Inositol catabolic process, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3298_Mixed,_incl._Inositol_catabolic_process,_and_Aldehyde_dehydrogenase_domain


id: CL:3299
description: Mixed, incl. Inositol catabolic process, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3299_Mixed,_incl._Inositol_catabolic_process,_and_Aldehyde_dehydrogenase_domain


id: CL:3302
description: Inositol catabolic process, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3302_Inositol_catabolic_process,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:3306
description: Inositol catabolic process, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3306_Inositol_catabolic_process,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:333
description: Mixed, incl. DbpA RNA binding domain , and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:333_Mixed,_incl._DbpA_RNA_binding_domain___,_and_Peptidyl-proline_modification


id: CL:3333
description: ANL, N-terminal domain, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3333_ANL,_N-terminal_domain,_and_Aldehyde_dehydrogenase_domain


id: CL:3342
description: Mixed, incl. RbsD-like superfamily, and Lignin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3342_Mixed,_incl._RbsD-like_superfamily,_and_Lignin_metabolic_process


id: CL:3351
description: Mixed, incl. Iron-containing alcohol dehydrogenase , and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3351_Mixed,_incl._Iron-containing_alcohol_dehydrogenase_,_and_Aldo/keto_reductase_family


id: CL:3352
description: Aldo/keto reductase family, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3352_Aldo/keto_reductase_family,_and_TatD_related_DNase


id: CL:3363
description: Mixed, incl. Iron-containing alcohol dehydrogenase , and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3363_Mixed,_incl._Iron-containing_alcohol_dehydrogenase_,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:3375
description: Mixed, incl. Uronic acid metabolic process, and D-galactonate dehydratase DgoD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3375_Mixed,_incl._Uronic_acid_metabolic_process,_and_D-galactonate_dehydratase_DgoD-like


id: CL:3376
description: Mixed, incl. D-galactonate dehydratase DgoD-like, and UxaA/GarD, SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3376_Mixed,_incl._D-galactonate_dehydratase_DgoD-like,_and_UxaA/GarD,_SAF_domain


id: CL:3377
description: Mixed, incl. D-galactonate dehydratase DgoD-like, and Sugar phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3377_Mixed,_incl._D-galactonate_dehydratase_DgoD-like,_and_Sugar_phosphate_transporter


id: CL:3378
description: Mixed, incl. D-galactonate dehydratase DgoD-like, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3378_Mixed,_incl._D-galactonate_dehydratase_DgoD-like,_and_Alpha/beta_hydrolase_fold


id: CL:3391
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3391_Mixed,_incl._Mandelate_racemase/muconate_lactonizing_enzyme,_conserved_site,_and_Six-bladed_beta-propeller,_TolB-like

description:
  Mixed, incl. Mandelate racemase/muconate lactonizing enzyme, conserved site, and Six-bladed beta-propeller, TolB-like


id: CL:3400
description: Mixed, incl. L-rhamnose mutarotase, and UxaA/GarD, SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3400_Mixed,_incl._L-rhamnose_mutarotase,_and_UxaA/GarD,_SAF_domain


id: CL:3410
description: Uronic acid metabolic process, and KduI/IolB family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3410_Uronic_acid_metabolic_process,_and_KduI/IolB_family


id: CL:343
description: NUDIX domain, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:343_NUDIX_domain,_and_Exoribonuclease_activity


id: CL:3431
description: Mixed, incl. Ribulose-phosphate 3-epimerase-like, and Polyketide synthase, enoylreductase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3431_Mixed,_incl._Ribulose-phosphate_3-epimerase-like,_and_Polyketide_synthase,_enoylreductase_domain


id: CL:3441
description: Mixed, incl. PTS system glucitol/sorbitol-specific IIA component, and Glucitol operon activator
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3441_Mixed,_incl._PTS_system_glucitol/sorbitol-specific_IIA_component,_and_Glucitol_operon_activator


id: CL:3442
description: Mixed, incl. PTS system glucitol/sorbitol-specific IIA component, and Glucitol operon activator
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3442_Mixed,_incl._PTS_system_glucitol/sorbitol-specific_IIA_component,_and_Glucitol_operon_activator


id: CL:3444
description: Mixed, incl. Glucitol operon activator, and PTS system enzyme II sorbitol-specific factor
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3444_Mixed,_incl._Glucitol_operon_activator,_and_PTS_system_enzyme_II_sorbitol-specific_factor


id: CL:3462
description: PTS system glucitol/sorbitol-specific IIA component, and Glucitol operon activator
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3462_PTS_system_glucitol/sorbitol-specific_IIA_component,_and_Glucitol_operon_activator


id: CL:3477
description: DeoR C-terminal sensor domain, and DeoR-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3477_DeoR_C-terminal_sensor_domain,_and_DeoR-like_helix-turn-helix_domain


id: CL:3502
description: Mixed, incl. Lactose permease-like, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3502_Mixed,_incl._Lactose_permease-like,_and_Galactose_metabolic_process


id: CL:3503
description: Mixed, incl. Lactose permease-like, and Galactosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3503_Mixed,_incl._Lactose_permease-like,_and_Galactosidase_activity


id: CL:3506
description: Mixed, incl. Galactosidase activity, and Parallel beta-helix repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3506_Mixed,_incl._Galactosidase_activity,_and_Parallel_beta-helix_repeat


id: CL:3541
description: Galactose metabolic process, and Aldose 1-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3541_Galactose_metabolic_process,_and_Aldose_1-epimerase


id: CL:3565
description: Mixed, incl. Ribokinase/fructokinase, and AMIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3565_Mixed,_incl._Ribokinase/fructokinase,_and_AMIN_domain


id: CL:3566
description: Mixed, incl. Nucleoplasm, and Ribokinase/fructokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3566_Mixed,_incl._Nucleoplasm,_and_Ribokinase/fructokinase


id: CL:3578
description: Mixed, incl. Ribokinase, and AMIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3578_Mixed,_incl._Ribokinase,_and_AMIN_domain


id: CL:3588
description: Glycerol metabolic process, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3588_Glycerol_metabolic_process,_and_Glycerophospholipid_metabolism


id: CL:3589
description: Mixed, incl. Glycerol metabolic process, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3589_Mixed,_incl._Glycerol_metabolic_process,_and_Phospholipid_metabolism


id: CL:3590
description: glycerol-3-phosphate metabolic process, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3590_glycerol-3-phosphate_metabolic_process,_and_Phospholipid_metabolism


id: CL:3591
description: glycerol-3-phosphate dehydrogenase (quinone) activity, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3591_glycerol-3-phosphate_dehydrogenase_(quinone)_activity,_and_Cysteine-rich_domain


id: CL:3593
description: glycerol-3-phosphate dehydrogenase (quinone) activity, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3593_glycerol-3-phosphate_dehydrogenase_(quinone)_activity,_and_4Fe-4S_dicluster_domain


id: CL:3634
description: Glycerone kinase activity, and Glycerol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3634_Glycerone_kinase_activity,_and_Glycerol_dehydrogenase


id: CL:3659
description: Glycerol-1-phosphate dehydrogenase, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3659_Glycerol-1-phosphate_dehydrogenase,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:3676
description: Mixed, incl. KDGP aldolase, and Translational readthrough
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3676_Mixed,_incl._KDGP_aldolase,_and_Translational_readthrough


id: CL:3694
description: Mixed, incl. Vitamin B6 metabolism, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3694_Mixed,_incl._Vitamin_B6_metabolism,_and_Aminotransferase,_class_I/classII


id: CL:3695
description: Mixed, incl. Vitamin B6 metabolism, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3695_Mixed,_incl._Vitamin_B6_metabolism,_and_Chromate_transport


id: CL:3696
description: Mixed, incl. Chromate transport, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3696_Mixed,_incl._Chromate_transport,_and_LysE_type_translocator


id: CL:3698
description: Mixed, incl. Chromate transport, and Aspartate racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3698_Mixed,_incl._Chromate_transport,_and_Aspartate_racemase


id: CL:3712
description: Mixed, incl. LysE type translocator, and Helix_turn_helix ASNC type
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3712_Mixed,_incl._LysE_type_translocator,_and_Helix_turn_helix_ASNC_type


id: CL:3724
description: Vitamin B6 metabolic process, and Pyridoxamine 5-phosphate oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3724_Vitamin_B6_metabolic_process,_and_Pyridoxamine_5-phosphate_oxidase


id: CL:3742
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3742_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_Transcription_regulator_HTH,_AraC-_type

description:
  Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and Transcription regulator HTH, AraC- type


id: CL:3744
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3744_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_dephospho-CoA_kinase_activity

description:
  Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and dephospho-CoA kinase activity


id: CL:3758
description: Mixed, incl. AhpD-like, and 3-hydroxyisobutyrate dehydrogenase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3758_Mixed,_incl._AhpD-like,_and_3-hydroxyisobutyrate_dehydrogenase-related


id: CL:3769
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3769_Mixed,_incl._Porphyrin_and_chlorophyll_metabolism,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mixed, incl. Porphyrin and chlorophyll metabolism, and Helix_turn_helix multiple antibiotic resistance protein


id: CL:3770
description: Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3770_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Nitroreductase-like


id: CL:3771
description: Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3771_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Nitroreductase-like


id: CL:3772
description: Mixed, incl. Nitroreductase-like, and Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3772_Mixed,_incl._Nitroreductase-like,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:3773
description: Mixed, incl. Nitroreductase-like, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3773_Mixed,_incl._Nitroreductase-like,_and_NADPH-dependent_FMN_reductase-like


id: CL:3775
description: Mixed, incl. Nitroreductase-like, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3775_Mixed,_incl._Nitroreductase-like,_and_Nitrotoluene_degradation


id: CL:3778
description: Mixed, incl. Nitroreductase, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3778_Mixed,_incl._Nitroreductase,_and_Nitrotoluene_degradation


id: CL:3780
description: Mixed, incl. Nitroreductase family, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3780_Mixed,_incl._Nitroreductase_family,_and_Flavin_reductase_like_domain


id: CL:3800
description: Nitrotoluene degradation, and Flavin oxidoreductase Frp family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3800_Nitrotoluene_degradation,_and_Flavin_oxidoreductase_Frp_family


id: CL:3830
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3830_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Bacterial_transcription_activator,_effector_binding

description:
  Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Bacterial transcription activator, effector binding


id: CL:3831
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3831_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Bacterial_regulatory_proteins,_luxR_family

description:
  Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Bacterial regulatory proteins, luxR family


id: CL:3833
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3833_Mixed,_incl._Bacterial_regulatory_proteins,_luxR_family,_and_Desulfoferrodoxin,_ferrous_iron-binding_domain_superfamily

description:
  Mixed, incl. Bacterial regulatory proteins, luxR family, and Desulfoferrodoxin, ferrous iron-binding domain superfamily


id: CL:3852
description: Mixed, incl. Bacterial transcription activator, effector binding, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3852_Mixed,_incl._Bacterial_transcription_activator,_effector_binding,_and_WYL_domain


id: CL:3865
description: Mixed, incl. Phenazine biosynthesis, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3865_Mixed,_incl._Phenazine_biosynthesis,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:3866
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3866_Mixed,_incl._Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase,_and_Dioxygenase_activity

description:
  Mixed, incl. Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase, and Dioxygenase activity


id: CL:3869
description: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase, and Tautomerase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3869_Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase,_and_Tautomerase_enzyme


id: CL:3891
description: Mixed, incl. Phenazine biosynthesis, and Steroid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3891_Mixed,_incl._Phenazine_biosynthesis,_and_Steroid_degradation


id: CL:3893
description: Nitrogen utilization, and Phenazine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3893_Nitrogen_utilization,_and_Phenazine_biosynthesis


id: CL:3915
description: Mixed, incl. LysE type translocator, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3915_Mixed,_incl._LysE_type_translocator,_and_DJ-1/PfpI


id: CL:393
description: Protein targeting, and 60Kd inner membrane protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:393_Protein_targeting,_and_60Kd_inner_membrane_protein


id: CL:3932
description: Tetrapyrrole biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3932_Tetrapyrrole_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3933
description: Tetrapyrrole biosynthetic process, and Alpha-ribazole phosphatase, CobC
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3933_Tetrapyrrole_biosynthetic_process,_and_Alpha-ribazole_phosphatase,_CobC


id: CL:3943
description: Tetrapyrrole methylase, subdomain 2, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3943_Tetrapyrrole_methylase,_subdomain_2,_and_Methyltransferase_domain


id: CL:396
description: Protein-transporting ATPase activity, and 60Kd inner membrane protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:396_Protein-transporting_ATPase_activity,_and_60Kd_inner_membrane_protein


id: CL:3960
description: CobB/CobQ-like glutamine amidotransferase, and Guanylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:3960_CobB/CobQ-like_glutamine_amidotransferase,_and_Guanylyltransferase_activity


id: CL:4010
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and BioY family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4010_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_BioY_family


id: CL:4012
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and BioY family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4012_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_BioY_family


id: CL:4016
description: BioY family, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4016_BioY_family,_and_Cobalt_transport_protein


id: CL:4032
description: Cobalt ion transport, and Response to metal ion
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4032_Cobalt_ion_transport,_and_Response_to_metal_ion


id: CL:4051
description: Mixed, incl. Ion transmembrane transport, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4051_Mixed,_incl._Ion_transmembrane_transport,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4052
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4052_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Response_to_arsenic-containing_substance


id: CL:4054
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4054_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Response_to_arsenic-containing_substance


id: CL:4055
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4055_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Response_to_arsenic-containing_substance


id: CL:4058
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4058_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Response_to_arsenic-containing_substance


id: CL:4062
description: Heavy-metal-associated domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4062_Heavy-metal-associated_domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:4078
description: Response to arsenic-containing substance, and ArsR-type transcription regulator, HTH motif
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4078_Response_to_arsenic-containing_substance,_and_ArsR-type_transcription_regulator,_HTH_motif


id: CL:4126
description: Mixed, incl. TrkA-C domain, and Peptidase M18
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4126_Mixed,_incl._TrkA-C_domain,_and_Peptidase_M18


id: CL:414
description: ATP synthesis, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:414_ATP_synthesis,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:4156
description: ABC transporters, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4156_ABC_transporters,_and_Periplasmic_binding_protein-like_I


id: CL:4157
description: ABC transporters, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4157_ABC_transporters,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4158
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4158_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:4159
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4159_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:4161
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4161_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like, and Bacterial periplasmic substrate-binding proteins


id: CL:4163
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4163_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like, and Bacterial periplasmic substrate-binding proteins


id: CL:4165
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4165_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:4167
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4167_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:4193
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4193_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:4211
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4211_UROD/MetE-like_superfamily,_and_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like

description:
  UROD/MetE-like superfamily, and ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like


id: CL:4225
description: Mixed, incl. Leucine-binding protein domain, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4225_Mixed,_incl._Leucine-binding_protein_domain,_and_Branched-chain_amino_acid_transport


id: CL:4229
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4229_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:4250
description: NIL domain, and Lipoprotein NlpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4250_NIL_domain,_and_Lipoprotein_NlpA_family


id: CL:4267
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4267_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_ABC_transporter-like,_ATP-binding_domain

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, and ABC transporter-like, ATP-binding domain


id: CL:4268
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4268_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_ABC_transporter-like,_ATP-binding_domain

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, and ABC transporter-like, ATP-binding domain


id: CL:4269
description: Mixed, incl. ABC-2 family transporter protein, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4269_Mixed,_incl._ABC-2_family_transporter_protein,_and_Biotin-lipoyl_like


id: CL:4271
description: Mixed, incl. ABC-2 family transporter protein, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4271_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC-2_type_transporter


id: CL:4273
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4273_Mixed,_incl._ABC-2_family_transporter_protein,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily

description:
  Mixed, incl. ABC-2 family transporter protein, and Tetracyclin repressor-like, C-terminal domain superfamily


id: CL:4274
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4274_Mixed,_incl._ABC-2_family_transporter_protein,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain

description:
  Mixed, incl. ABC-2 family transporter protein, and Membrane fusion protein, biotin-lipoyl like domain


id: CL:4287
description: Mixed, incl. Transmembrane beta strand, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4287_Mixed,_incl._Transmembrane_beta_strand,_and_ABC-2_transporter


id: CL:4318
description: Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4318_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:4320
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4320_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:4321
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4321_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:4330
description: Nickel cation transmembrane transporter activity, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4330_Nickel_cation_transmembrane_transporter_activity,_and_Nickel_cation_transport


id: CL:4344
description: Phospholipid transport, and Valyl-tRNA synthetase, tRNA-binding arm superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4344_Phospholipid_transport,_and_Valyl-tRNA_synthetase,_tRNA-binding_arm_superfamily


id: CL:4353
description: Mixed, incl. Helix-turn-helix domain, and Polyamine biosynthesis domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4353_Mixed,_incl._Helix-turn-helix_domain,_and_Polyamine_biosynthesis_domain


id: CL:4366
description: Mixed, incl. Periplasmic binding protein-like I, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4366_Mixed,_incl._Periplasmic_binding_protein-like_I,_and_ABC-type_carbohydrate_transporter_activity


id: CL:4368
description: Mixed, incl. ABC-type carbohydrate transporter activity, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4368_Mixed,_incl._ABC-type_carbohydrate_transporter_activity,_and_Periplasmic_binding_protein-like_I


id: CL:4369
description: Periplasmic binding protein-like I, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4369_Periplasmic_binding_protein-like_I,_and_ABC_transporter,_permease


id: CL:4370
description: ABC transporter, permease, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4370_ABC_transporter,_permease,_and_Pentose_transmembrane_transport


id: CL:4372
description: ABC transporter, permease, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4372_ABC_transporter,_permease,_and_Pentose_transmembrane_transport


id: CL:439
description: Mixed, incl. Peptidyl-glutamine methylation, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:439_Mixed,_incl._Peptidyl-glutamine_methylation,_and_RF-1_domain


id: CL:4397
description: Mixed, incl. LacI-type HTH domain, and D-ribose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4397_Mixed,_incl._LacI-type_HTH_domain,_and_D-ribose_catabolic_process


id: CL:4400
description: D-ribose catabolic process, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4400_D-ribose_catabolic_process,_and_Pentose_transmembrane_transport


id: CL:4418
description: Mixed, incl. Bacterial extracellular solute-binding protein, and MalK, OB fold domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4418_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_MalK,_OB_fold_domain


id: CL:4420
description: Mixed, incl. Bacterial extracellular solute-binding protein, and MalK, OB fold domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4420_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_MalK,_OB_fold_domain


id: CL:4422
description: Bacterial extracellular solute-binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4422_Bacterial_extracellular_solute-binding_protein,_and_TOBE_domain


id: CL:4448
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4448_Mixed,_incl._ABC_transporter,_maltose/maltodextrin_import,_MalK-like,_and_ABC-type_maltose_transporter_activity

description:
  Mixed, incl. ABC transporter, maltose/maltodextrin import, MalK-like, and ABC-type maltose transporter activity


id: CL:4467
description: Mixed, incl. Transcription regulator HTH, LysR, and Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4467_Mixed,_incl._Transcription_regulator_HTH,_LysR,_and_Molybdenum_cofactor_biosynthesis


id: CL:4468
description: Mixed, incl. Transcription regulator HTH, LysR, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4468_Mixed,_incl._Transcription_regulator_HTH,_LysR,_and_ABC-type_polyamine_transporter_activity


id: CL:4471
description: Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4471_Transcription_regulator_HTH,_LysR


id: CL:4475
description: Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4475_Transcription_regulator_HTH,_LysR


id: CL:4478
description: Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4478_Transcription_regulator_HTH,_LysR


id: CL:4479
description: Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4479_Transcription_regulator_HTH,_LysR


id: CL:450
description: Peptidase S26, and tRNA (guanine-N1-)-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:450_Peptidase_S26,_and_tRNA_(guanine-N1-)-methyltransferase_activity


id: CL:4520
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4520_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type polyamine transporter activity, and Bacterial extracellular solute-binding protein


id: CL:4521
description: Mixed, incl. Polyamine transport, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4521_Mixed,_incl._Polyamine_transport,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4522
description: Polyamine transport, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4522_Polyamine_transport,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4537
description: Mixed, incl. Gamma-aminobutyric acid metabolic process, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4537_Mixed,_incl._Gamma-aminobutyric_acid_metabolic_process,_and_Aminotransferase_class_V_domain


id: CL:4549
description: Sulfate transport, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4549_Sulfate_transport,_and_Sulfate_transport


id: CL:4566
description: Mixed, incl. Molybdenum cofactor biosynthesis, and Molybdenum ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4566_Mixed,_incl._Molybdenum_cofactor_biosynthesis,_and_Molybdenum_ion_binding


id: CL:4567
description: Mixed, incl. Molybdenum cofactor biosynthesis, and Molybdenum ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4567_Mixed,_incl._Molybdenum_cofactor_biosynthesis,_and_Molybdenum_ion_binding


id: CL:4568
description: Mixed, incl. Molybdenum cofactor biosynthesis, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4568_Mixed,_incl._Molybdenum_cofactor_biosynthesis,_and_Molybdate_ion_transport


id: CL:4569
description: Molybdenum cofactor biosynthesis, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4569_Molybdenum_cofactor_biosynthesis,_and_Molybdate_ion_transport


id: CL:4572
description: Molybdenum cofactor biosynthesis, and Toxin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4572_Molybdenum_cofactor_biosynthesis,_and_Toxin_catabolic_process


id: CL:4575
description: Molybdopterin cofactor metabolic process, and Toxin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4575_Molybdopterin_cofactor_metabolic_process,_and_Toxin_catabolic_process


id: CL:4604
description: Aldehyde ferredoxin oxidoreductase, N-terminal, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4604_Aldehyde_ferredoxin_oxidoreductase,_N-terminal,_and_PBP_domain


id: CL:4615
description: Mixed, incl. Formate dehydrogenase (NAD+) activity, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4615_Mixed,_incl._Formate_dehydrogenase_(NAD+)_activity,_and_Ferric_iron_binding


id: CL:4617
description: Formate dehydrogenase (NAD+) activity, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4617_Formate_dehydrogenase_(NAD+)_activity,_and_Ferric_iron_binding


id: CL:463
description: Mixed, incl. Protein carrier chaperone, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:463_Mixed,_incl._Protein_carrier_chaperone,_and_MnmG,_N-terminal_domain


id: CL:4634
description: Mixed, incl. Hypoxanthine metabolic process, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4634_Mixed,_incl._Hypoxanthine_metabolic_process,_and_[2Fe-2S]-binding


id: CL:4637
description: Hypoxanthine metabolic process, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4637_Hypoxanthine_metabolic_process,_and_[2Fe-2S]-binding


id: CL:4658
description: beta-Lactam resistance, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4658_beta-Lactam_resistance,_and_Biotin-lipoyl_like


id: CL:4659
description: beta-Lactam resistance, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4659_beta-Lactam_resistance,_and_Biotin-lipoyl_like


id: CL:4660
description: Major facilitator superfamily domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4660_Major_facilitator_superfamily_domain,_and_Sulfite_exporter_TauE/SafE


id: CL:4662
description: Major facilitator superfamily domain, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4662_Major_facilitator_superfamily_domain,_and_SNARE_associated_Golgi_protein


id: CL:4663
description: Major facilitator superfamily domain, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4663_Major_facilitator_superfamily_domain,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4664
description: Major facilitator superfamily domain, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4664_Major_facilitator_superfamily_domain,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4665
description: Suppression of phagosomal maturation, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4665_Suppression_of_phagosomal_maturation,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4667
description: Mixed, incl. MFS_1 like family, and Drug resistance transporter EmrB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4667_Mixed,_incl._MFS_1_like_family,_and_Drug_resistance_transporter_EmrB-like


id: CL:4686
description: Sugar/inositol transporter, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4686_Sugar/inositol_transporter,_and_Major_facilitator_superfamily


id: CL:4699
description: Mixed, incl. Tetracyclin repressor-like, C-terminal domain, and Aminotransferase class-V
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4699_Mixed,_incl._Tetracyclin_repressor-like,_C-terminal_domain,_and_Aminotransferase_class-V


id: CL:4708
description: Mixed, incl. SNARE associated Golgi protein, and Zymogen
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4708_Mixed,_incl._SNARE_associated_Golgi_protein,_and_Zymogen


id: CL:4720
description: Sulfite exporter TauE/SafE, and Domain of unknown function DUF4405
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4720_Sulfite_exporter_TauE/SafE,_and_Domain_of_unknown_function_DUF4405


id: CL:4731
description: Mixed, incl. RND efflux pump, membrane fusion protein, and Acriflavin resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4731_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_Acriflavin_resistance_protein


id: CL:4732
description: RND efflux pump, membrane fusion protein, and Acriflavin resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4732_RND_efflux_pump,_membrane_fusion_protein,_and_Acriflavin_resistance_protein


id: CL:4735
description: Mixed, incl. HlyD family secretion protein, and Acriflavin resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4735_Mixed,_incl._HlyD_family_secretion_protein,_and_Acriflavin_resistance_protein


id: CL:4738
description: MMPL family, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4738_MMPL_family,_and_HlyD_family_secretion_protein


id: CL:4756
description: Mixed, incl. Cell inner membrane, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4756_Mixed,_incl._Cell_inner_membrane,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4779
description: Mixed, incl. AcrB/AcrD/AcrF family, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4779_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Outer_membrane_efflux_protein


id: CL:4788
description: Phosphonate and phosphinate metabolism, and Thymidine phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4788_Phosphonate_and_phosphinate_metabolism,_and_Thymidine_phosphorylase_activity


id: CL:4799
description: Phosphate ion transport, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4799_Phosphate_ion_transport,_and_Ppx/GppA_phosphatase


id: CL:480
description: Mixed, incl. RNA polymerase, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:480_Mixed,_incl._RNA_polymerase,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:481
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Glycerol kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:481_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Glycerol_kinase


id: CL:4813
description: Ppx/GppA phosphatase, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4813_Ppx/GppA_phosphatase,_and_Polyphosphate_kinase_activity


id: CL:483
description: Mixed, incl. Glycerol kinase, and Inositol hexakisphosphate
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:483_Mixed,_incl._Glycerol_kinase,_and_Inositol_hexakisphosphate


id: CL:4830
description: Mixed, incl. Sulfur metabolism, and Cellular amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4830_Mixed,_incl._Sulfur_metabolism,_and_Cellular_amino_acid_catabolic_process


id: CL:4831
description: Mixed, incl. Sulfur metabolism, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4831_Mixed,_incl._Sulfur_metabolism,_and_Histidine_metabolism


id: CL:4836
description: NMT1/THI5 like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4836_NMT1/THI5_like,_and_Sulfur_metabolism


id: CL:486
description: Mixed, incl. Caspase domain, and Threonyl/alanyl tRNA synthetase, SAD
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:486_Mixed,_incl._Caspase_domain,_and_Threonyl/alanyl_tRNA_synthetase,_SAD


id: CL:4866
description: Mixed, incl. Histidine metabolism, and 4-hydroxyproline catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4866_Mixed,_incl._Histidine_metabolism,_and_4-hydroxyproline_catabolic_process


id: CL:4868
description: 4-hydroxyproline catabolic process, and Amidase, carbamoylase-type
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4868_4-hydroxyproline_catabolic_process,_and_Amidase,_carbamoylase-type


id: CL:4890
description: Mixed, incl. Uracil DNA N-glycosylase activity, and Helix-hairpin-helix DNA-binding motif class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4890_Mixed,_incl._Uracil_DNA_N-glycosylase_activity,_and_Helix-hairpin-helix_DNA-binding_motif_class_1


id: CL:4917
description: Signaling, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4917_Signaling,_and_Nucleotide_cyclase


id: CL:4953
description: Nucleotide cyclase, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4953_Nucleotide_cyclase,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:4956
description: Nucleotide cyclase, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4956_Nucleotide_cyclase,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:4959
description: Nucleotide cyclase, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4959_Nucleotide_cyclase,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:4961
description: Nucleotide cyclase, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:4961_Nucleotide_cyclase,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:5025
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5025_OmpR/PhoB-type_DNA-binding_domain,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  OmpR/PhoB-type DNA-binding domain, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:5044
description: Taxis, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5044_Taxis,_and_MCP_methyltransferase,_CheR-type


id: CL:5049
description: Taxis, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5049_Taxis,_and_MCP_methyltransferase,_CheR-type


id: CL:5051
description: Taxis, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5051_Taxis,_and_MCP_methyltransferase,_CheR-type


id: CL:5056
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5056_CheW-like_domain,_and_Demethylation


id: CL:5079
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5079_CheW-like_domain,_and_Demethylation


id: CL:5130
description: CheC-like family, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5130_CheC-like_family,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:514
description: Mixed, incl. RNA polymerase, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:514_Mixed,_incl._RNA_polymerase,_and_HIT_domain


id: CL:5149
description: Mixed, incl. Histidine kinase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5149_Mixed,_incl._Histidine_kinase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:5150
description: Histidine kinase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5150_Histidine_kinase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:5161
description: Mixed, incl. NMT1/THI5 like, and Sugar phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5161_Mixed,_incl._NMT1/THI5_like,_and_Sugar_phosphate_transporter


id: CL:5172
description: TyrR family, helix-turn-helix domain, and Propionate catabolism activator
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5172_TyrR_family,_helix-turn-helix_domain,_and_Propionate_catabolism_activator


id: CL:5181
description: HD-GYP domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5181_HD-GYP_domain,_and_Diguanylate_cyclase


id: CL:5194
description: Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5194_Cilium,_and_Bacterial-type_flagellum_organization


id: CL:5203
description: Bacterial-type flagellum basal body, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5203_Bacterial-type_flagellum_basal_body,_and_Bacterial-type_flagellum_organization


id: CL:5204
description: Bacterial-type flagellum basal body, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5204_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_protein_export


id: CL:5207
description: Bacterial-type flagellum basal body, distal rod, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5207_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Cytoskeletal_motor_activity


id: CL:5220
description: Bacterial flagellum protein export, and Bacterial flagellum
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5220_Bacterial_flagellum_protein_export,_and_Bacterial_flagellum


id: CL:5229
description: Cytoskeletal motor activity, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5229_Cytoskeletal_motor_activity,_and_Bacterial-type_flagellum_organization


id: CL:5231
description: Cytoskeletal motor activity, and ATP synthase alpha/beta family, beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5231_Cytoskeletal_motor_activity,_and_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: CL:5265
description: Mixed, incl. Bacterial-type flagellum hook, and FlgN protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5265_Mixed,_incl._Bacterial-type_flagellum_hook,_and_FlgN_protein


id: CL:5303
description: Amine catabolic process, and ANTAR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5303_Amine_catabolic_process,_and_ANTAR_domain


id: CL:5318
description: Potassium transport, and Domain present in phytochromes and cGMP-specific phosphodiesterases.
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5318_Potassium_transport,_and_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: CL:5342
description: CheC-like family, and Flagellar assembly protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5342_CheC-like_family,_and_Flagellar_assembly_protein_A


id: CL:5344
description: Flagellar assembly protein A, and Zinc finger
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5344_Flagellar_assembly_protein_A,_and_Zinc_finger


id: CL:5365
description: DNA binding HTH domain, AraC-type, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5365_DNA_binding_HTH_domain,_AraC-type,_and_Histidine_kinase


id: CL:5367
description: Helix_turn_helix, arabinose operon control protein, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5367_Helix_turn_helix,_arabinose_operon_control_protein,_and_Histidine_kinase


id: CL:5369
description: Transcription regulator HTH-like, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5369_Transcription_regulator_HTH-like,_and_Histidine_kinase


id: CL:5371
description: Transcription regulator HTH-like, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5371_Transcription_regulator_HTH-like,_and_Histidine_kinase


id: CL:5391
description: HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5391_HTH_domain_AraC-type,_conserved_site


id: CL:5410
description: Mixed, incl. Single cache domain 3, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5410_Mixed,_incl._Single_cache_domain_3,_and_Histidine_kinase


id: CL:5434
description: Mixed, incl. Chloramphenicol acetyltransferase, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5434_Mixed,_incl._Chloramphenicol_acetyltransferase,_and_DUF218_domain


id: CL:545
description: Mixed, incl. Chaperone, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:545_Mixed,_incl._Chaperone,_and_Thioredoxin-like_superfamily


id: CL:5450
description: Mixed, incl. Horizontal gene transfer, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5450_Mixed,_incl._Horizontal_gene_transfer,_and_Pilus_organization


id: CL:5453
description: Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5453_Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:5456
description: Type II/IV secretion system protein, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5456_Type_II/IV_secretion_system_protein,_and_Pilin-like


id: CL:546
description: Mixed, incl. Chaperone, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:546_Mixed,_incl._Chaperone,_and_Thioredoxin-like_superfamily


id: CL:547
description: Mixed, incl. Protein folding, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:547_Mixed,_incl._Protein_folding,_and_Thioredoxin-like_superfamily


id: CL:5479
description: Magnesium chelatase ChlI-like, catalytic domain, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5479_Magnesium_chelatase_ChlI-like,_catalytic_domain,_and_Horizontal_gene_transfer


id: CL:548
description: Protein folding, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:548_Protein_folding,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:5491
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5491_Mixed,_incl._Transmembrane_signaling_receptor_activity,_and_Cellular_response_to_DNA_damage_stimulus

description:
  Mixed, incl. Transmembrane signaling receptor activity, and Cellular response to DNA damage stimulus


id: CL:5501
description: TIM-barrel domain, IGPS-like, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5501_TIM-barrel_domain,_IGPS-like,_and_Sister_chromatid_cohesion


id: CL:551
description: Chaperone, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:551_Chaperone,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:5513
description: Mostly uncharacterized, incl. HNH nuclease, and Purine nucleosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5513_Mostly_uncharacterized,_incl._HNH_nuclease,_and_Purine_nucleosidase_activity


id: CL:5515
description: Mixed, incl. Purine nucleosidase activity, and 5-3 DNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5515_Mixed,_incl._Purine_nucleosidase_activity,_and_5-3_DNA_helicase_activity


id: CL:553
description: Proteolysis involved in protein catabolic process, and Protein folding chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:553_Proteolysis_involved_in_protein_catabolic_process,_and_Protein_folding_chaperone


id: CL:5538
description: Mixed, incl. Signal, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5538_Mixed,_incl._Signal,_and_ABC_transporters


id: CL:5539
description: Mixed, incl. Signal, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5539_Mixed,_incl._Signal,_and_Glycoside_hydrolase_superfamily


id: CL:5540
description: Mixed, incl. Signal, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5540_Mixed,_incl._Signal,_and_Glycoside_hydrolase_superfamily


id: CL:5541
description: Mixed, incl. S-layer homology domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5541_Mixed,_incl._S-layer_homology_domain,_and_Signal


id: CL:5542
description: Mixed, incl. S-layer homology domain, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5542_Mixed,_incl._S-layer_homology_domain,_and_Membrane_organization


id: CL:5543
description: Mixed, incl. S-layer homology domain, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5543_Mixed,_incl._S-layer_homology_domain,_and_Membrane_organization


id: CL:5546
description: Mixed, incl. S-layer homology domain, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5546_Mixed,_incl._S-layer_homology_domain,_and_Membrane_organization


id: CL:5548
description: Mixed, incl. S-layer homology domain, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5548_Mixed,_incl._S-layer_homology_domain,_and_Membrane_organization


id: CL:5552
description: Mixed, incl. Membrane organization, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5552_Mixed,_incl._Membrane_organization,_and_S-layer_homology_domain


id: CL:5555
description: Mixed, incl. Membrane organization, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5555_Mixed,_incl._Membrane_organization,_and_S-layer_homology_domain


id: CL:5557
description: Lipopolysaccharide transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5557_Lipopolysaccharide_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:5573
description: Protein insertion into membrane, and Lipid A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5573_Protein_insertion_into_membrane,_and_Lipid_A_metabolic_process


id: CL:5596
description: Mixed, incl. Lipase (class 3), and Biosynthesis of ansamycins
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5596_Mixed,_incl._Lipase_(class_3),_and_Biosynthesis_of_ansamycins


id: CL:5611
description: LytR_cpsA_psr family, and AMIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5611_LytR_cpsA_psr_family,_and_AMIN_domain


id: CL:5629
description: Mixed, incl. Sulfatase, and Protein of unknown function DUF535
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5629_Mixed,_incl._Sulfatase,_and_Protein_of_unknown_function_DUF535


id: CL:5631
description: Sodium/solute symporter superfamily, and Purple acid phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5631_Sodium/solute_symporter_superfamily,_and_Purple_acid_phosphatase-like


id: CL:5654
description: N-acetylmuramoyl-L-alanine amidase activity, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5654_N-acetylmuramoyl-L-alanine_amidase_activity,_and_NlpC/P60_family


id: CL:5655
description: N-acetylmuramoyl-L-alanine amidase activity, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5655_N-acetylmuramoyl-L-alanine_amidase_activity,_and_NlpC/P60_family


id: CL:5666
description: N-acetylmuramoyl-L-alanine amidase activity, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5666_N-acetylmuramoyl-L-alanine_amidase_activity,_and_LysM_domain


id: CL:5679
description: Mixed, incl. Peptidase M23, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5679_Mixed,_incl._Peptidase_M23,_and_Tail_specific_protease


id: CL:569
description: Unfolded protein binding, and Glycosyl transferase family 41
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:569_Unfolded_protein_binding,_and_Glycosyl_transferase_family_41


id: CL:5692
description: Mixed, incl. Immunoglobulin-like fold, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5692_Mixed,_incl._Immunoglobulin-like_fold,_and_Glycoside_hydrolase_superfamily


id: CL:5693
description: Mixed, incl. SGNH hydrolase superfamily, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5693_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Pectin_lyase_fold


id: CL:5695
description: Mixed, incl. SGNH hydrolase superfamily, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5695_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Pectin_lyase_fold


id: CL:5698
description: Mixed, incl. Toxin CdiA-like, Filamentous hemagglutinin motif repeats, and Hemagglutinin repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5698_Mixed,_incl._Toxin_CdiA-like,_Filamentous_hemagglutinin_motif_repeats,_and_Hemagglutinin_repeat


id: CL:5716
description: Mixed, incl. Fibronectin type III, and Hemagglutinin repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5716_Mixed,_incl._Fibronectin_type_III,_and_Hemagglutinin_repeat


id: CL:5738
description: Mixed, incl. Protein ADP-ribosylation, and Adhesion of symbiont to host
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5738_Mixed,_incl._Protein_ADP-ribosylation,_and_Adhesion_of_symbiont_to_host


id: CL:5754
description: Mixed, incl. Tail specific protease, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5754_Mixed,_incl._Tail_specific_protease,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:5765
description: Mixed, incl. 3D domain, and Endoribonuclease activity, producing 5-phosphomonoesters
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5765_Mixed,_incl._3D_domain,_and_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: CL:5766
description: Mixed, incl. 3D domain, and Endoribonuclease activity, producing 5-phosphomonoesters
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5766_Mixed,_incl._3D_domain,_and_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: CL:5767
description: Mixed, incl. NAD+ kinase activity, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5767_Mixed,_incl._NAD+_kinase_activity,_and_Ribonuclease_III_domain


id: CL:5776
description: 3D domain, and Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5776_3D_domain,_and_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: CL:5785
description: Mixed, incl. Alkaline shock protein Asp23, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5785_Mixed,_incl._Alkaline_shock_protein_Asp23,_and_DHH_family


id: CL:5798
description: Mixed, incl. Iron ion transport, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5798_Mixed,_incl._Iron_ion_transport,_and_ABC_transporter,_BtuC-like


id: CL:5799
description: Mixed, incl. Iron ion transport, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5799_Mixed,_incl._Iron_ion_transport,_and_ABC_transporter,_BtuC-like


id: CL:5801
description: Mixed, incl. Iron coordination entity transport, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5801_Mixed,_incl._Iron_coordination_entity_transport,_and_ABC_transporter,_BtuC-like


id: CL:5802
description: Mixed, incl. Iron coordination entity transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5802_Mixed,_incl._Iron_coordination_entity_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5804
description: Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5804_Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5805
description: FecCD transport family, and Heme transport
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5805_FecCD_transport_family,_and_Heme_transport


id: CL:5816
description: Heme transport, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5816_Heme_transport,_and_ABC_3_transport_family


id: CL:5831
description: Mixed, incl. TonB-dependent Receptor Plug Domain, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5831_Mixed,_incl._TonB-dependent_Receptor_Plug_Domain,_and_TonB,_C-terminal


id: CL:5852
description: ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5852_ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:5874
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5874_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor,_and_Flavodoxin

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor, and Flavodoxin


id: CL:5887
description: Mostly uncharacterized, incl. Regulation of cell death, and FlgT, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5887_Mostly_uncharacterized,_incl._Regulation_of_cell_death,_and_FlgT,_N-terminal_domain_superfamily


id: CL:5889
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5889_Mostly_uncharacterized,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mostly uncharacterized, incl. Regulation of cell death, and Type II secretion system (T2SS), protein F


id: CL:5892
description: Mixed, incl. Regulation of cell death, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5892_Mixed,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:5895
description: Mixed, incl. GspD/PilQ family, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5895_Mixed,_incl._GspD/PilQ_family,_and_Type_II/IV_secretion_system_protein


id: CL:5915
description: Mostly uncharacterized, incl. HSP20-like chaperone, and CGCAxxGCC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5915_Mostly_uncharacterized,_incl._HSP20-like_chaperone,_and_CGCAxxGCC_motif


id: CL:5918
description: Mixed, incl. CGCAxxGCC motif, and PD-(D/E)XK endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5918_Mixed,_incl._CGCAxxGCC_motif,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily


id: CL:592
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:592_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Oxidoreductase activity, acting on a sulfur group of donors, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:595
description: NADH:flavin oxidoreductase / NADH oxidase family, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:595_NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Thioredoxin_domain


id: CL:5950
description: Mixed, incl. Cell death, and Tetracyclin repressor-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5950_Mixed,_incl._Cell_death,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily


id: CL:5952
description: Mostly uncharacterized, incl. G5 domain, and PRC-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5952_Mostly_uncharacterized,_incl._G5_domain,_and_PRC-barrel_domain


id: CL:5954
description: Mixed, incl. G5 domain, and PRC-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5954_Mixed,_incl._G5_domain,_and_PRC-barrel_domain


id: CL:5986
description: Mostly uncharacterized, incl. Cyclase activity, and Phage terminase small subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5986_Mostly_uncharacterized,_incl._Cyclase_activity,_and_Phage_terminase_small_subunit


id: CL:5987
description: Mixed, incl. Cyclase activity, and Calcineurin-like phosphoesterase domain, ApaH type
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5987_Mixed,_incl._Cyclase_activity,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type


id: CL:5989
description: Mixed, incl. Cyclase activity, and Calcineurin-like phosphoesterase domain, ApaH type
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5989_Mixed,_incl._Cyclase_activity,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type


id: CL:5990
description: Mostly uncharacterized, incl. Phage terminase small subunit, and Peptidase M41-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5990_Mostly_uncharacterized,_incl._Phage_terminase_small_subunit,_and_Peptidase_M41-like


id: CL:5994
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5994_Mixed,_incl._Aromatic_acid_exporter_family_member_1,_and_Concanavalin_A-like_lectin/glucanases_superfamily

description:
  Mixed, incl. Aromatic acid exporter family member 1, and Concanavalin A-like lectin/glucanases superfamily


id: CL:5997
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:5997_Mixed,_incl._Aromatic_acid_exporter_family_member_1,_and_Concanavalin_A-like_lectin/glucanases_superfamily

description:
  Mixed, incl. Aromatic acid exporter family member 1, and Concanavalin A-like lectin/glucanases superfamily


id: CL:6024
description: Cyclase activity, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6024_Cyclase_activity,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:6048
description: Mostly uncharacterized, incl. Virion assembly, and Phage terminase large subunit, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6048_Mostly_uncharacterized,_incl._Virion_assembly,_and_Phage_terminase_large_subunit,_N-terminal


id: CL:6052
description: Mostly uncharacterized, incl. Galactose-binding-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6052_Mostly_uncharacterized,_incl._Galactose-binding-like_domain_superfamily


id: CL:6078
description: Mostly uncharacterized, incl. Virion assembly, and Phage terminase large subunit, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6078_Mostly_uncharacterized,_incl._Virion_assembly,_and_Phage_terminase_large_subunit,_N-terminal


id: CL:6094
description: Mixed, incl. Virion assembly, and Phage terminase large subunit, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6094_Mixed,_incl._Virion_assembly,_and_Phage_terminase_large_subunit,_N-terminal


id: CL:6111
description: Mixed, incl. Anaerobic sulphatase maturase, radical SAM, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6111_Mixed,_incl._Anaerobic_sulphatase_maturase,_radical_SAM,_and_Sulfuric_ester_hydrolase_activity


id: CL:6112
description: Mixed, incl. Anaerobic sulphatase maturase, radical SAM, and Arylsulfatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6112_Mixed,_incl._Anaerobic_sulphatase_maturase,_radical_SAM,_and_Arylsulfatase_activity


id: CL:6114
description: Arylsulfatase activity, and Anaerobic sulphatase maturase, radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6114_Arylsulfatase_activity,_and_Anaerobic_sulphatase_maturase,_radical_SAM


id: CL:6132
description: Mixed, incl. Regulation of catabolic process, and Winged helix-turn-helix DNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6132_Mixed,_incl._Regulation_of_catabolic_process,_and_Winged_helix-turn-helix_DNA-binding


id: CL:6149
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6149_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Sulfur_compound_metabolic_process

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Sulfur compound metabolic process


id: CL:6150
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6150_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Iron-sulfur_cluster_assembly

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Iron-sulfur cluster assembly


id: CL:6151
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6151_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII


id: CL:6152
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6152_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII


id: CL:6154
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6154_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII


id: CL:6156
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6156_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII


id: CL:6157
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6157_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: CL:6159
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6159_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: CL:6175
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6175_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Tricarboxylic_acid_metabolic_process

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Tricarboxylic acid metabolic process


id: CL:6186
description: Nitrogen fixation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6186_Nitrogen_fixation,_and_Nitrogen_regulatory_protein_PII


id: CL:6213
description: Rubredoxin-like domain, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6213_Rubredoxin-like_domain,_and_Flavodoxin


id: CL:6227
description: Mixed, incl. MTH1175 domain, and Protein of unknown function DUF134
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6227_Mixed,_incl._MTH1175_domain,_and_Protein_of_unknown_function__DUF134


id: CL:6231
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6231_CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Methanocaldococcus_jannaschii_dihydropteroate_synthase-like,_MBL-fold_metallo_hydrolase_domain

description:
  CobQ/CobB/MinD/ParA nucleotide binding domain, and Methanocaldococcus jannaschii dihydropteroate synthase-like, MBL-fold metallo hydrolase domain


id: CL:625
description: Mixed, incl. Response to metal ion, and Clp, repeat (R) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:625_Mixed,_incl._Response_to_metal_ion,_and_Clp,_repeat_(R)_domain


id: CL:6251
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6251_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:6253
description: SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6253_SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase


id: CL:6265
description: Transcription regulator Rrf2, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6265_Transcription_regulator_Rrf2,_and_Iron-sulfur_cluster_assembly


id: CL:6277
description: Mixed, incl. Thiamine metabolism, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6277_Mixed,_incl._Thiamine_metabolism,_and_Quinone_metabolic_process


id: CL:6278
description: Mixed, incl. Thiamine metabolism, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6278_Mixed,_incl._Thiamine_metabolism,_and_Quinone_metabolic_process


id: CL:6279
description: Mixed, incl. Thiamine biosynthetic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6279_Mixed,_incl._Thiamine_biosynthetic_process,_and_Quinone_metabolic_process


id: CL:6281
description: Thiamine biosynthetic process, and Ubiquitin-like modifier activating enzyme activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6281_Thiamine_biosynthetic_process,_and_Ubiquitin-like_modifier_activating_enzyme_activity


id: CL:6283
description: Ubiquitin-like modifier activating enzyme activity, and ThiS family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6283_Ubiquitin-like_modifier_activating_enzyme_activity,_and_ThiS_family


id: CL:6318
description: Iron hydrogenase small subunit, and ThiH/NocL/HydG-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6318_Iron_hydrogenase_small_subunit,_and_ThiH/NocL/HydG-like


id: CL:6333
description: Mixed, incl. TAT protein transport complex, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6333_Mixed,_incl._TAT_protein_transport_complex,_and_Cysteine-type_peptidase_activity


id: CL:6335
description: TAT protein transport complex, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6335_TAT_protein_transport_complex,_and_Cysteine-type_peptidase_activity


id: CL:6357
description: Thioesterase domain, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6357_Thioesterase_domain,_and_ABC_transporter


id: CL:636
description: Mixed, incl. Ketone catabolic process, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:636_Mixed,_incl._Ketone_catabolic_process,_and_Rhodanese_Homology_Domain


id: CL:6371
description: Mixed, incl. CMP kinase activity, and Protein of unknown function DUF6198
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6371_Mixed,_incl._CMP_kinase_activity,_and_Protein_of_unknown_function_DUF6198


id: CL:6382
description: Mostly uncharacterized, incl. Peptidase M29, and Orn/Lys/Arg decarboxylase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6382_Mostly_uncharacterized,_incl._Peptidase_M29,_and_Orn/Lys/Arg_decarboxylase,_C-terminal


id: CL:6383
description: Mostly uncharacterized, incl. Orn/Lys/Arg decarboxylase, C-terminal, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6383_Mostly_uncharacterized,_incl._Orn/Lys/Arg_decarboxylase,_C-terminal,_and_GIY-YIG_endonuclease


id: CL:6385
description: Mixed, incl. Orn/Lys/Arg decarboxylase, C-terminal, and Amino acid antiporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6385_Mixed,_incl._Orn/Lys/Arg_decarboxylase,_C-terminal,_and_Amino_acid_antiporter


id: CL:6386
description: Mixed, incl. dTTP biosynthetic process, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6386_Mixed,_incl._dTTP_biosynthetic_process,_and_Methyltransferase_small_domain


id: CL:639
description: Mixed, incl. DsrEFH-like, and MraW methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:639_Mixed,_incl._DsrEFH-like,_and_MraW_methylase_family


id: CL:6397
description: Orn/Lys/Arg decarboxylase, major domain, and Amino acid antiporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6397_Orn/Lys/Arg_decarboxylase,_major_domain,_and_Amino_acid_antiporter


id: CL:6407
description: Mixed, incl. GIY-YIG endonuclease, and Purine nucleobase catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6407_Mixed,_incl._GIY-YIG_endonuclease,_and_Purine_nucleobase_catabolic_process


id: CL:6417
description: Mixed, incl. ELP3/YhcC, and Peptidase M29
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6417_Mixed,_incl._ELP3/YhcC,_and_Peptidase_M29


id: CL:6433
description: Mixed, incl. Dynamin, N-terminal, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6433_Mixed,_incl._Dynamin,_N-terminal,_and_Methylthiotransferase


id: CL:6435
description: Mixed, incl. TatD related DNase, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6435_Mixed,_incl._TatD_related_DNase,_and_Methylthiotransferase


id: CL:6454
description: Dynamin, N-terminal, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6454_Dynamin,_N-terminal,_and_Coiled_coil


id: CL:6472
description: Mixed, incl. Ferric-uptake regulator, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6472_Mixed,_incl._Ferric-uptake_regulator,_and_Rubrerythrin


id: CL:6474
description: Mixed, incl. Ferric-uptake regulator, and Hydrogen peroxide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6474_Mixed,_incl._Ferric-uptake_regulator,_and_Hydrogen_peroxide_metabolic_process


id: CL:6476
description: Ferric-uptake regulator, and Peptide deformylase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6476_Ferric-uptake_regulator,_and_Peptide_deformylase


id: CL:6502
description: Mixed, incl. Phosphate transport system permease protein 1, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6502_Mixed,_incl._Phosphate_transport_system_permease_protein_1,_and_Rubrerythrin


id: CL:6511
description: Mixed, incl. Two-component system, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6511_Mixed,_incl._Two-component_system,_and_Sporulation


id: CL:6512
description: Mixed, incl. Secondary active transmembrane transporter activity, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6512_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_Nucleoside_recognition


id: CL:6513
description: Mixed, incl. Nucleoside recognition, and Solute carrier family 13
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6513_Mixed,_incl._Nucleoside_recognition,_and_Solute_carrier_family_13


id: CL:6514
description: Mixed, incl. Nucleoside recognition, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6514_Mixed,_incl._Nucleoside_recognition,_and_Peptidase_dimerisation_domain


id: CL:6515
description: Mixed, incl. Nucleoside recognition, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6515_Mixed,_incl._Nucleoside_recognition,_and_Peptidase_dimerisation_domain


id: CL:6517
description: Mixed, incl. Nucleoside recognition, and C4-dicarboxylate anaerobic carrier
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6517_Mixed,_incl._Nucleoside_recognition,_and_C4-dicarboxylate_anaerobic_carrier


id: CL:6519
description: Peptidase dimerisation domain, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6519_Peptidase_dimerisation_domain,_and_Nucleoside_recognition


id: CL:6533
description: Mixed, incl. Nucleoside recognition, and Threonine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6533_Mixed,_incl._Nucleoside_recognition,_and_Threonine-type_peptidase_activity


id: CL:6545
description: Mixed, incl. Nucleoside recognition, and Shikimate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6545_Mixed,_incl._Nucleoside_recognition,_and_Shikimate_kinase_activity


id: CL:6558
description: Mixed, incl. C4-dicarboxylate anaerobic carrier, and Sugar transporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6558_Mixed,_incl._C4-dicarboxylate_anaerobic_carrier,_and_Sugar_transporter,_conserved_site


id: CL:6570
description: Mixed, incl. Solute carrier family 13, and Sodium:dicarboxylate symporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6570_Mixed,_incl._Solute_carrier_family_13,_and_Sodium:dicarboxylate_symporter,_conserved_site


id: CL:6571
description: Solute carrier family 13, and Sodium:dicarboxylate symporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6571_Solute_carrier_family_13,_and_Sodium:dicarboxylate_symporter,_conserved_site


id: CL:6574
description: Sodium:dicarboxylate symporter, conserved site, and Solute carrier family 13
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6574_Sodium:dicarboxylate_symporter,_conserved_site,_and_Solute_carrier_family_13


id: CL:6597
description: Sodium/solute symporter, and HutP
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6597_Sodium/solute_symporter,_and_HutP


id: CL:6615
description: Mixed, incl. Symport, and Dipeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6615_Mixed,_incl._Symport,_and_Dipeptidase_activity


id: CL:6617
description: Mixed, incl. Symport, and Four-carbon acid sugar kinase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6617_Mixed,_incl._Symport,_and_Four-carbon_acid_sugar_kinase,_N-terminal_domain


id: CL:6641
description: Mixed, incl. Transcription regulator HTH, GntR, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6641_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_Cyclophilin-like_domain_superfamily


id: CL:6643
description: Mixed, incl. acetyl-CoA metabolic process, and Triphosphoribosyl-dephospho-CoA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6643_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Triphosphoribosyl-dephospho-CoA_protein


id: CL:6645
description: Mixed, incl. acetyl-CoA metabolic process, and Triphosphoribosyl-dephospho-CoA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6645_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Triphosphoribosyl-dephospho-CoA_protein


id: CL:6646
description: Mixed, incl. Biotin-requiring enzyme, and ClpP/crotonase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6646_Mixed,_incl._Biotin-requiring_enzyme,_and_ClpP/crotonase-like_domain_superfamily


id: CL:6648
description: Mixed, incl. Biotin-requiring enzyme, and Ketone body catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6648_Mixed,_incl._Biotin-requiring_enzyme,_and_Ketone_body_catabolic_process


id: CL:665
description: Mixed, incl. Isopentenyl diphosphate metabolic process, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:665_Mixed,_incl._Isopentenyl_diphosphate_metabolic_process,_and_PDZ_domain_6


id: CL:6667
description: Mixed, incl. acetyl-CoA metabolic process, and Citrate lyase ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6667_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Citrate_lyase_ligase


id: CL:6668
description: Mixed, incl. acetyl-CoA metabolic process, and Citrate lyase ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6668_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Citrate_lyase_ligase


id: CL:667
description: Mixed, incl. PDZ domain 6, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:667_Mixed,_incl._PDZ_domain_6,_and_Prenyltransferase_activity


id: CL:6679
description: acetyl-CoA metabolic process, and Citrate lyase ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6679_acetyl-CoA_metabolic_process,_and_Citrate_lyase_ligase


id: CL:6701
description: Transcription regulator HTH, GntR, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6701_Transcription_regulator_HTH,_GntR,_and_Cyclophilin-like_domain_superfamily


id: CL:6702
description: GntR, C-terminal, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6702_GntR,_C-terminal,_and_UbiC_transcription_regulator-associated


id: CL:6717
description: UbiC transcription regulator-associated, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6717_UbiC_transcription_regulator-associated,_and_Cupin_domain


id: CL:6731
description: Cyclophilin-like domain superfamily, and LamB/YcsF family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6731_Cyclophilin-like_domain_superfamily,_and_LamB/YcsF_family


id: CL:6732
description: LamB/YcsF family, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6732_LamB/YcsF_family,_and_Cyclophilin-like_domain_superfamily


id: CL:6741
description: Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6741_Cyclophilin-like_domain_superfamily


id: CL:6753
description: Mixed, incl. CNNM, transmembrane domain, and Protein of unknown function DUF445
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6753_Mixed,_incl._CNNM,_transmembrane_domain,_and_Protein_of_unknown_function_DUF445


id: CL:6755
description: CNNM, transmembrane domain, and Integral membrane protein TerC
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6755_CNNM,_transmembrane_domain,_and_Integral_membrane_protein_TerC


id: CL:6773
description: Protein of unknown function DUF445, and Amino acid permease, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6773_Protein_of_unknown_function_DUF445,_and_Amino_acid_permease,_conserved_site


id: CL:6787
description: Mostly uncharacterized, incl. Phenolic acid decarboxylase, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6787_Mostly_uncharacterized,_incl._Phenolic_acid_decarboxylase,_and_Acetyltransferase_(GNAT)_family


id: CL:6788
description: Mixed, incl. Phenolic acid decarboxylase, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6788_Mixed,_incl._Phenolic_acid_decarboxylase,_and_Acetyltransferase_(GNAT)_family


id: CL:6789
description: Mixed, incl. Phenolic acid decarboxylase, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6789_Mixed,_incl._Phenolic_acid_decarboxylase,_and_Acetyltransferase_(GNAT)_family


id: CL:6791
description: Mixed, incl. Acetyltransferase (GNAT) family, and Phenolic acid decarboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6791_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Phenolic_acid_decarboxylase


id: CL:681
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:681_Isopentenyl_diphosphate_metabolic_process


id: CL:6819
description: Mixed, incl. Response to oxygen levels, and Polysaccharide biosynthesis C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6819_Mixed,_incl._Response_to_oxygen_levels,_and_Polysaccharide_biosynthesis_C-terminal_domain


id: CL:6830
description: Mixed, incl. Nickel cation binding, and HypD, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6830_Mixed,_incl._Nickel_cation_binding,_and_HypD,_domain_2


id: CL:6832
description: Mixed, incl. Nickel cation binding, and HypD, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6832_Mixed,_incl._Nickel_cation_binding,_and_HypD,_domain_2


id: CL:6835
description: Mixed, incl. Nickel cation binding, and HypD, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6835_Mixed,_incl._Nickel_cation_binding,_and_HypD,_domain_2


id: CL:6837
description: HypD, domain 2, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6837_HypD,_domain_2,_and_ATPase_complex


id: CL:6866
description: Mixed, incl. Cell surface, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6866_Mixed,_incl._Cell_surface,_and_LysE_type_translocator


id: CL:6875
description: Mixed, incl. Negative regulation of protein metabolic process, and Ribose/Galactose Isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6875_Mixed,_incl._Negative_regulation_of_protein_metabolic_process,_and_Ribose/Galactose_Isomerase


id: CL:6886
description: Mixed, incl. DNA recombination, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6886_Mixed,_incl._DNA_recombination,_and_Primosome_complex


id: CL:6888
description: Mixed, incl. Primosome complex, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6888_Mixed,_incl._Primosome_complex,_and_Transposition


id: CL:6889
description: Mixed, incl. Primosome complex, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6889_Mixed,_incl._Primosome_complex,_and_Universal_stress_protein_A_family


id: CL:6891
description: Primosome complex, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6891_Primosome_complex,_and_Universal_stress_protein_A_family


id: CL:6895
description: IstB-like ATP-binding protein, and IstB-like ATP binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6895_IstB-like_ATP-binding_protein,_and_IstB-like_ATP_binding_protein


id: CL:6908
description: Universal stress protein A family, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6908_Universal_stress_protein_A_family,_and_DNA_integration


id: CL:6925
description: Mixed, incl. Cellular metal ion homeostasis, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6925_Mixed,_incl._Cellular_metal_ion_homeostasis,_and_Restriction_endonuclease_type_II-like


id: CL:6928
description: Mixed, incl. Cellular metal ion homeostasis, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6928_Mixed,_incl._Cellular_metal_ion_homeostasis,_and_Sister_chromatid_cohesion


id: CL:693
description: Catalytic activity, acting on DNA, and Queuosine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:693_Catalytic_activity,_acting_on_DNA,_and_Queuosine_metabolic_process


id: CL:694
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:694_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:695
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:695_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:6951
description: Transposase IS200-like, and Sulfur compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6951_Transposase_IS200-like,_and_Sulfur_compound_catabolic_process


id: CL:6972
description: Mixed, incl. DNA integration, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6972_Mixed,_incl._DNA_integration,_and_Helix-turn-helix_domain


id: CL:6973
description: Mostly uncharacterized, incl. Pfam phage integrase family, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6973_Mostly_uncharacterized,_incl._Pfam_phage_integrase_family,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:6975
description: Mixed, incl. Resolvase, N terminal domain, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6975_Mixed,_incl._Resolvase,_N_terminal_domain,_and_DNA_primase_activity


id: CL:6976
description: Mixed, incl. DNA primase activity, and Resolvase, N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6976_Mixed,_incl._DNA_primase_activity,_and_Resolvase,_N_terminal_domain


id: CL:698
description: Mixed, incl. Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:698_Mixed,_incl._Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:6988
description: Mixed, incl. Caulimovirus viroplasmin, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:6988_Mixed,_incl._Caulimovirus_viroplasmin,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:700
description: Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:700_Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:7006
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7006_Mixed,_incl._Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_Polysaccharide_biosynthesis_C-terminal_domain

description:
  Mixed, incl. Transcriptional regulator TetR, C-terminal, Firmicutes type, and Polysaccharide biosynthesis C-terminal domain


id: CL:702
description: Mixed, incl. DNA topoisomerase, type IA, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:702_Mixed,_incl._DNA_topoisomerase,_type_IA,_and_DNA_damage_sensor_activity


id: CL:7025
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7025_Mixed,_incl._Protein_of_unknown_function_DUF932,_and_Uncharacterised_protein_family_UPF0758,_conserved_site

description:
  Mixed, incl. Protein of unknown function DUF932, and Uncharacterised protein family UPF0758, conserved site


id: CL:7040
description: Mixed, incl. Transposition, DNA-mediated, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7040_Mixed,_incl._Transposition,_DNA-mediated,_and_Bacterial_secretion_system


id: CL:7042
description: Mixed, incl. Transposition, DNA-mediated, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7042_Mixed,_incl._Transposition,_DNA-mediated,_and_Bacterial_secretion_system


id: CL:7043
description: Mixed, incl. Bacterial secretion system, and Response to bacterium
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7043_Mixed,_incl._Bacterial_secretion_system,_and_Response_to_bacterium


id: CL:7044
description: Mostly uncharacterized, incl. Protein kinase domain, and Phage tail baseplate hub (GPD)
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7044_Mostly_uncharacterized,_incl._Protein_kinase_domain,_and_Phage_tail_baseplate_hub_(GPD)


id: CL:7046
description: Mixed, incl. Protein kinase domain, and SMAD/FHA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7046_Mixed,_incl._Protein_kinase_domain,_and_SMAD/FHA_domain_superfamily


id: CL:7048
description: Protein kinase domain, and SMAD/FHA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7048_Protein_kinase_domain,_and_SMAD/FHA_domain_superfamily


id: CL:705
description: Mixed, incl. AAA domain, and DNA topoisomerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:705_Mixed,_incl._AAA_domain,_and_DNA_topoisomerase_III


id: CL:7065
description: Mixed, incl. Response to bacterium, and Phage tail baseplate hub (GPD)
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7065_Mixed,_incl._Response_to_bacterium,_and_Phage_tail_baseplate_hub_(GPD)


id: CL:7084
description: Mixed, incl. Prolyl oligopeptidase family, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7084_Mixed,_incl._Prolyl_oligopeptidase_family,_and_DUF218_domain


id: CL:7095
description: Mostly uncharacterized, incl. Response to bacterium, and Phage tail baseplate hub (GPD)
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7095_Mostly_uncharacterized,_incl._Response_to_bacterium,_and_Phage_tail_baseplate_hub_(GPD)


id: CL:7097
description: Mixed, incl. Response to bacterium, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7097_Mixed,_incl._Response_to_bacterium,_and_Bacterial_secretion_system


id: CL:7120
description: Mixed, incl. Transposition, DNA-mediated, and YibE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7120_Mixed,_incl._Transposition,_DNA-mediated,_and_YibE/F-like


id: CL:7121
description: Mixed, incl. Transposition, DNA-mediated, and YibE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7121_Mixed,_incl._Transposition,_DNA-mediated,_and_YibE/F-like


id: CL:7152
description: Mixed, incl. DDE transposase sub-family, and Ribonuclease H superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7152_Mixed,_incl._DDE_transposase_sub-family,_and_Ribonuclease_H_superfamily


id: CL:7166
description: Mixed, incl. AAA ATPase domain, and RelA/SpoT
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7166_Mixed,_incl._AAA_ATPase_domain,_and_RelA/SpoT


id: CL:7176
description: Mixed, incl. PUA-like superfamily, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7176_Mixed,_incl._PUA-like_superfamily,_and_Response_to_antibiotic


id: CL:7196
description: Mostly uncharacterized, incl. HxlR-like helix-turn-helix, and Peptidoglycan-based cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7196_Mostly_uncharacterized,_incl._HxlR-like_helix-turn-helix,_and_Peptidoglycan-based_cell_wall


id: CL:7197
description: Mixed, incl. HxlR-like helix-turn-helix, and Cellular response to chemical stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7197_Mixed,_incl._HxlR-like_helix-turn-helix,_and_Cellular_response_to_chemical_stimulus


id: CL:7199
description: Mixed, incl. HxlR-like helix-turn-helix, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7199_Mixed,_incl._HxlR-like_helix-turn-helix,_and_NAD(P)H-binding


id: CL:7201
description: Mixed, incl. HxlR-like helix-turn-helix, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7201_Mixed,_incl._HxlR-like_helix-turn-helix,_and_NAD(P)H-binding


id: CL:7216
description: Mixed, incl. NAD(P)H-binding , and Peptide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7216_Mixed,_incl._NAD(P)H-binding_,_and_Peptide_transmembrane_transporter_activity


id: CL:7240
description: Mixed, incl. Cell pole, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7240_Mixed,_incl._Cell_pole,_and_TRAM_domain


id: CL:7256
description: Mostly uncharacterized, incl. Macro domain-like, and Beta-phosphoglucomutase hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7256_Mostly_uncharacterized,_incl._Macro_domain-like,_and_Beta-phosphoglucomutase_hydrolase


id: CL:7258
description: Mixed, incl. YjbQ-like superfamily, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7258_Mixed,_incl._YjbQ-like_superfamily,_and_D-amino_acid_metabolic_process


id: CL:7285
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7285_Mostly_uncharacterized,_incl._Aromatic_acid_exporter_family_member_1,_and_MFS/sugar_transport_protein

description:
  Mostly uncharacterized, incl. Aromatic acid exporter family member 1, and MFS/sugar transport protein


id: CL:7287
description: Mixed, incl. Aromatic acid exporter family member 1, and MFS/sugar transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7287_Mixed,_incl._Aromatic_acid_exporter_family_member_1,_and_MFS/sugar_transport_protein


id: CL:7312
description: Mostly uncharacterized, incl. CxxC-x17-CxxC domain, and Flagellin, C-terminal domain, subdomain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7312_Mostly_uncharacterized,_incl._CxxC-x17-CxxC_domain,_and_Flagellin,_C-terminal_domain,_subdomain_2


id: CL:7314
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7314_Mixed,_incl._Flagellin,_C-terminal_domain,_subdomain_2,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Flagellin, C-terminal domain, subdomain 2, and Helix-turn-helix XRE-family like proteins


id: CL:7328
description: Mixed, incl. CxxC-x17-CxxC domain, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7328_Mixed,_incl._CxxC-x17-CxxC_domain,_and_Calcineurin-like_phosphoesterase


id: CL:7339
description: Mixed, incl. DNA metabolic process, and Homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7339_Mixed,_incl._DNA_metabolic_process,_and_Homologous_recombination


id: CL:7340
description: Mostly uncharacterized, incl. Homologous recombination, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7340_Mostly_uncharacterized,_incl._Homologous_recombination,_and_Toxin-antitoxin_complex


id: CL:7342
description: Mostly uncharacterized, incl. Fido domain, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7342_Mostly_uncharacterized,_incl._Fido_domain,_and_Toxin-antitoxin_complex


id: CL:7343
description: Mixed, incl. Toxin-antitoxin complex, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7343_Mixed,_incl._Toxin-antitoxin_complex,_and_DNA_modification


id: CL:7344
description: Mixed, incl. Toxin-antitoxin complex, and Protein of unknown function DUF6088
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7344_Mixed,_incl._Toxin-antitoxin_complex,_and_Protein_of_unknown_function_DUF6088


id: CL:7345
description: Mixed, incl. Toxin-antitoxin complex, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7345_Mixed,_incl._Toxin-antitoxin_complex,_and_mRNA_interferase_PemK-like


id: CL:7347
description: Toxin-antitoxin complex, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7347_Toxin-antitoxin_complex,_and_mRNA_interferase_PemK-like


id: CL:7369
description: Protein of unknown function DUF6088, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7369_Protein_of_unknown_function_DUF6088,_and_Fido_domain-containing_protein


id: CL:7383
description: Mixed, incl. DNA modification, and Homeodomain-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7383_Mixed,_incl._DNA_modification,_and_Homeodomain-like_domain


id: CL:7385
description: Mixed, incl. DNA modification, and Homeodomain-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7385_Mixed,_incl._DNA_modification,_and_Homeodomain-like_domain


id: CL:7414
description: Mostly uncharacterized, incl. Fido domain, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7414_Mostly_uncharacterized,_incl._Fido_domain,_and_Endonuclease


id: CL:7416
description: Mostly uncharacterized, incl. HNH nuclease, and Protein of unknown function DUF2971
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7416_Mostly_uncharacterized,_incl._HNH_nuclease,_and_Protein_of_unknown_function_DUF2971


id: CL:7419
description: Mixed, incl. 5-3 DNA helicase activity, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7419_Mixed,_incl._5-3_DNA_helicase_activity,_and_Nucleotide_excision_repair


id: CL:7435
description: Mixed, incl. RNA polymerase sigma factor, region 3/4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7435_Mixed,_incl._RNA_polymerase_sigma_factor,_region_3/4-like


id: CL:7448
description: Mixed, incl. Fido domain, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7448_Mixed,_incl._Fido_domain,_and_LysM_domain


id: CL:7449
description: Fido domain, and Integrase/recombinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7449_Fido_domain,_and_Integrase/recombinase,_N-terminal


id: CL:7458
description: Mixed, incl. LysM domain, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7458_Mixed,_incl._LysM_domain,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:7475
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7475_Mixed,_incl._Protein_of_unknown_function_DUF932,_and_Uncharacterised_protein_family_UPF0758,_conserved_site

description:
  Mixed, incl. Protein of unknown function DUF932, and Uncharacterised protein family UPF0758, conserved site


id: CL:7491
description: Mixed, incl. Aminoacyl-tRNA editing domain, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7491_Mixed,_incl._Aminoacyl-tRNA_editing_domain,_and_Transposition,_DNA-mediated


id: CL:7493
description: Mixed, incl. HDOD domain, and Integral membrane protein YjbE
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7493_Mixed,_incl._HDOD_domain,_and_Integral_membrane_protein_YjbE


id: CL:7513
description: Mixed, incl. Homeodomain-like domain, and Winged helix-turn helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7513_Mixed,_incl._Homeodomain-like_domain,_and_Winged_helix-turn_helix_domain


id: CL:7515
description: Mixed, incl. Winged helix-turn helix domain, and Methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7515_Mixed,_incl._Winged_helix-turn_helix_domain,_and_Methylation


id: CL:7532
description: Mixed, incl. C4-dicarboxylate anaerobic carrier, and Gluconate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7532_Mixed,_incl._C4-dicarboxylate_anaerobic_carrier,_and_Gluconate_transporter


id: CL:7547
description: Mixed, incl. ACT domain, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7547_Mixed,_incl._ACT_domain,_and_Hexosyltransferase_activity


id: CL:7558
description: Mostly uncharacterized, incl. Ion channel, and Integrase, SAM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7558_Mostly_uncharacterized,_incl._Ion_channel,_and_Integrase,_SAM-like,_N-terminal


id: CL:757
description: DNA replication, and Putative DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:757_DNA_replication,_and_Putative_DNA-binding_domain_superfamily


id: CL:758
description: DNA replication, and dUTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:758_DNA_replication,_and_dUTP_catabolic_process


id: CL:7580
description: Mixed, incl. Fluoroacetyl-CoA thioesterase, and Asparaginase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7580_Mixed,_incl._Fluoroacetyl-CoA_thioesterase,_and_Asparaginase_activity


id: CL:7601
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7601_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Endonuclease_activity

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Endonuclease activity


id: CL:7603
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7603_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Zinc_finger

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Zinc finger


id: CL:7605
description: Mixed, incl. Viral process, and Chlorocyclohexane and chlorobenzene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7605_Mixed,_incl._Viral_process,_and_Chlorocyclohexane_and_chlorobenzene_degradation


id: CL:7606
description: Mixed, incl. Lysozyme activity, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7606_Mixed,_incl._Lysozyme_activity,_and_Endonuclease_activity


id: CL:761
description: DNA polymerase complex, and DNA polymerase III, alpha subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:761_DNA_polymerase_complex,_and_DNA_polymerase_III,_alpha_subunit


id: CL:7617
description: Viral process, and Chlorocyclohexane and chlorobenzene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7617_Viral_process,_and_Chlorocyclohexane_and_chlorobenzene_degradation


id: CL:7631
description: Mostly uncharacterized, incl. Zinc finger, and Protein ADP-ribosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7631_Mostly_uncharacterized,_incl._Zinc_finger,_and_Protein_ADP-ribosylation


id: CL:7634
description: Mixed, incl. Zinc finger, and Protein ADP-ribosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7634_Mixed,_incl._Zinc_finger,_and_Protein_ADP-ribosylation


id: CL:7657
description: Mostly uncharacterized, incl. Crossover junction endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7657_Mostly_uncharacterized,_incl._Crossover_junction_endodeoxyribonuclease_activity


id: CL:7689
description: Mostly uncharacterized, incl. Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7689_Mostly_uncharacterized,_incl._Bacterial_regulatory_proteins,_tetR_family


id: CL:7769
description: Mixed, incl. Six-bladed beta-propeller, TolB-like, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7769_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_HxlR-like_helix-turn-helix


id: CL:7882
description: Mixed, incl. SpoVT / AbrB like domain, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:7882_Mixed,_incl._SpoVT_/_AbrB_like_domain,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:796
description: DNA replication, and RNA-binding S4 domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:796_DNA_replication,_and_RNA-binding_S4_domain_superfamily


id: CL:810
description: Base-excision repair, and Endodeoxyribonuclease activity, producing 5-phosphomonoesters
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:810_Base-excision_repair,_and_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: CL:821
description: Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:821_Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:833
description: Holliday junction helicase complex, and Crossover junction endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:833_Holliday_junction_helicase_complex,_and_Crossover_junction_endodeoxyribonuclease_activity


id: CL:843
description: Mixed, incl. RNA repair, and Ribonuclease J
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:843_Mixed,_incl._RNA_repair,_and_Ribonuclease_J


id: CL:855
description: Ribonuclease J, and Cell inner membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:855_Ribonuclease_J,_and_Cell_inner_membrane


id: CL:869
description: tRNA processing, and Serine-tRNA ligase, type1
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:869_tRNA_processing,_and_Serine-tRNA_ligase,_type1


id: CL:872
description: Mixed, incl. Serine-tRNA ligase, type1, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:872_Mixed,_incl._Serine-tRNA_ligase,_type1,_and_RNA_(guanine-N7)-methylation


id: CL:892
description: Mixed, incl. Cell division, and Regulation of developmental process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:892_Mixed,_incl._Cell_division,_and_Regulation_of_developmental_process


id: CL:893
description: Mixed, incl. Cell division, and Regulation of developmental process
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:893_Mixed,_incl._Cell_division,_and_Regulation_of_developmental_process


id: CL:895
description: Mixed, incl. Regulation of cell shape, and Cytokinesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:895_Mixed,_incl._Regulation_of_cell_shape,_and_Cytokinesis


id: CL:896
description: Regulation of cell shape, and Cytokinesis
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:896_Regulation_of_cell_shape,_and_Cytokinesis


id: CL:897
description: Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:897_Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:898
description: Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:898_Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:903
description: Mur ligase, central, and Lipid modification
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:903_Mur_ligase,_central,_and_Lipid_modification


id: CL:928
description: Penicillin binding, and Penicillin-binding protein 5, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:928_Penicillin_binding,_and_Penicillin-binding_protein_5,_C-terminal_domain


id: CL:944
description: Mixed, incl. Regulation of cell cycle, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:944_Mixed,_incl._Regulation_of_cell_cycle,_and_Regulation_of_cell_shape


id: CL:946
description: Mixed, incl. Actin, and Penicillin-binding protein 2
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:946_Mixed,_incl._Actin,_and_Penicillin-binding_protein_2


id: CL:972
description: ParB/Spo0J, HTH domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:972_ParB/Spo0J,_HTH_domain,_and_AAA_domain


id: CL:987
description: Mixed, incl. MraW methylase family, and Prolipoprotein diacylglyceryl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_84035_STRINGid_CL:987_Mixed,_incl._MraW_methylase_family,_and_Prolipoprotein_diacylglyceryl_transferase


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_84035_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_84035_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_84035_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 5
name:
  GOBP.STRING_v12.0_84035_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_84035_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


