# pathwayInfo

id: PF00185
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00185
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00185_Aspartate/ornithine_carbamoyltransferase,_Asp/Orn_binding_domain


id: PF00198
description: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00198
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00198_2-oxoacid_dehydrogenases_acyltransferase_(catalytic_domain)


id: PF00205
description: Thiamine pyrophosphate enzyme, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00205
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00205_Thiamine_pyrophosphate_enzyme,_central_domain


id: PF00254
description: FKBP-type peptidyl-prolyl cis-trans isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00254
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00254_FKBP-type_peptidyl-prolyl_cis-trans_isomerase


id: PF00275
description: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00275
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00275_EPSP_synthase_(3-phosphoshikimate_1-carboxyvinyltransferase)


id: PF00306
description: ATP synthase alpha/beta chain, C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00306
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00306_ATP_synthase_alpha/beta_chain,_C_terminal_domain


id: PF00309
description: Sigma-54 factor, Activator interacting domain (AID)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00309
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00309_Sigma-54_factor,_Activator_interacting_domain_(AID)_


id: PF00316
description: Fructose-1-6-bisphosphatase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00316
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00316_Fructose-1-6-bisphosphatase,_N-terminal_domain


id: PF00329
description: Respiratory-chain NADH dehydrogenase, 30 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00329
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00329_Respiratory-chain_NADH_dehydrogenase,_30_Kd_subunit


id: PF00345
description: Pili and flagellar-assembly chaperone, PapD N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00345
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00345_Pili_and_flagellar-assembly_chaperone,_PapD_N-terminal_domain


id: PF00346
description: Respiratory-chain NADH dehydrogenase, 49 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00346
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00346_Respiratory-chain_NADH_dehydrogenase,_49_Kd_subunit


id: PF00353
description: RTX calcium-binding nonapeptide repeat (4 copies)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00353
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00353_RTX_calcium-binding_nonapeptide_repeat_(4_copies)


id: PF00388
description: Phosphatidylinositol-specific phospholipase C, X domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00388
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00388_Phosphatidylinositol-specific_phospholipase_C,_X_domain


id: PF00401
description: ATP synthase, Delta/Epsilon chain, long alpha-helix domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00401
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00401_ATP_synthase,_Delta/Epsilon_chain,_long_alpha-helix_domain


id: PF00408
description: Phosphoglucomutase/phosphomannomutase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00408
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00408_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain


id: PF00415
description: Regulator of chromosome condensation (RCC1) repeat
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00415
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00415_Regulator_of_chromosome_condensation_(RCC1)_repeat


id: PF00420
description: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00420
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00420_NADH-ubiquinone/plastoquinone_oxidoreductase_chain_4L


id: PF00438
description: S-adenosylmethionine synthetase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00438
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00438_S-adenosylmethionine_synthetase,_N-terminal_domain


id: PF00456
description: Transketolase, thiamine diphosphate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00456
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00456_Transketolase,_thiamine_diphosphate_binding_domain


id: PF00496
description: Bacterial extracellular solute-binding proteins, family 5 Middle
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00496
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00496_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: PF00497
description: Bacterial extracellular solute-binding proteins, family 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00497
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00497_Bacterial_extracellular_solute-binding_proteins,_family_3


id: PF00499
description: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00499
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00499_NADH-ubiquinone/plastoquinone_oxidoreductase_chain_6


id: PF00507
description: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00507
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00507_NADH-ubiquinone/plastoquinone_oxidoreductase,_chain_3


id: PF00528
description: Binding-protein-dependent transport system inner membrane component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00528
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00528_Binding-protein-dependent_transport_system_inner_membrane_component


id: PF00532
description: Periplasmic binding proteins and sugar binding domain of LacI family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00532
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00532_Periplasmic_binding_proteins_and_sugar_binding_domain_of_LacI_family


id: PF00584
description: SecE/Sec61-gamma subunits of protein translocation complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00584
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00584_SecE/Sec61-gamma_subunits_of_protein_translocation_complex


id: PF00585
description: C-terminal regulatory domain of Threonine dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00585
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00585_C-terminal_regulatory_domain_of_Threonine_dehydratase


id: PF00586
description: AIR synthase related protein, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00586
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00586_AIR_synthase_related_protein,_N-terminal_domain


id: PF00587
description: tRNA synthetase class II core domain (G, H, P, S and T)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00587
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00587_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T)


id: PF00662
description: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00662
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00662_NADH-Ubiquinone_oxidoreductase_(complex_I),_chain_5_N-terminus


id: PF00697
description: N-(5phosphoribosyl)anthranilate (PRA) isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00697
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00697_N-(5phosphoribosyl)anthranilate_(PRA)_isomerase


id: PF00707
description: Translation initiation factor IF-3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00707
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00707_Translation_initiation_factor_IF-3,_C-terminal_domain


id: PF00724
description: NADH:flavin oxidoreductase / NADH oxidase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00724
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00724_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: PF00749
description: tRNA synthetases class I (E and Q), catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00749
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00749_tRNA_synthetases_class_I_(E_and_Q),_catalytic_domain


id: PF00763
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00763
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00763_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_catalytic_domain


id: PF00766
description: Electron transfer flavoprotein FAD-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00766
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00766_Electron_transfer_flavoprotein_FAD-binding_domain


id: PF00828
description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00828
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00828_Ribosomal_proteins_50S-L15,_50S-L18e,_60S-L27A


id: PF00861
description: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00861
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00861_Ribosomal_L18_of_archaea,_bacteria,_mitoch._and_chloroplast


id: PF00883
description: Cytosol aminopeptidase family, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00883
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00883_Cytosol_aminopeptidase_family,_catalytic_domain


id: PF00905
description: Penicillin binding protein transpeptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00905
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00905_Penicillin_binding_protein_transpeptidase_domain


id: PF00923
description: Transaldolase/Fructose-6-phosphate aldolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00923
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00923_Transaldolase/Fructose-6-phosphate_aldolase


id: PF00926
description: 3,4-dihydroxy-2-butanone 4-phosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00926
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00926_3,4-dihydroxy-2-butanone_4-phosphate_synthase


id: PF00930
description: Dipeptidyl peptidase IV (DPP IV) N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00930
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00930_Dipeptidyl_peptidase_IV_(DPP_IV)_N-terminal_region


id: PF00933
description: Glycosyl hydrolase family 3 N terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00933
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF00933_Glycosyl_hydrolase_family_3_N_terminal_domain


id: PF01035
description: 6-O-methylguanine DNA methyltransferase, DNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01035
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01035_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: PF01041
description: DegT/DnrJ/EryC1/StrS aminotransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01041
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01041_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: PF01058
description: NADH ubiquinone oxidoreductase, 20 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01058
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01058_NADH_ubiquinone_oxidoreductase,_20_Kd_subunit


id: PF01059
description: NADH-ubiquinone oxidoreductase chain 4, amino terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01059
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01059_NADH-ubiquinone_oxidoreductase_chain_4,_amino_terminus


id: PF01075
description: Glycosyltransferase family 9 (heptosyltransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01075
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01075_Glycosyltransferase_family_9_(heptosyltransferase)


id: PF01128
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01128
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01128_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase


id: PF01135
description: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01135
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01135_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)


id: PF01210
description: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01210
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01210_NAD-dependent_glycerol-3-phosphate_dehydrogenase_N-terminus


id: PF01272
description: Transcription elongation factor, GreA/GreB, C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01272
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01272_Transcription_elongation_factor,_GreA/GreB,_C-term


id: PF01288
description: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01288
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01288_7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase_(HPPK)


id: PF01297
description: Zinc-uptake complex component A periplasmic
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01297
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01297_Zinc-uptake_complex_component_A_periplasmic


id: PF01326
description: Pyruvate phosphate dikinase, AMP/ATP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01326
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01326_Pyruvate_phosphate_dikinase,_AMP/ATP-binding_domain


id: PF01408
description: Oxidoreductase family, NAD-binding Rossmann fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01408
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01408_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: PF01420
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01420
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01420_Type_I_restriction_modification_DNA_specificity_domain


id: PF01450
description: Acetohydroxy acid isomeroreductase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01450
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01450_Acetohydroxy_acid_isomeroreductase,_catalytic_domain


id: PF01509
description: TruB family pseudouridylate synthase (N terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01509
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01509_TruB_family_pseudouridylate_synthase_(N_terminal_domain)


id: PF01512
description: Respiratory-chain NADH dehydrogenase 51 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01512
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01512_Respiratory-chain_NADH_dehydrogenase_51_Kd_subunit


id: PF01547
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01547
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01547_Bacterial_extracellular_solute-binding_protein


id: PF01571
description: Aminomethyltransferase folate-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01571
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01571_Aminomethyltransferase_folate-binding_domain


id: PF01648
description: 4-phosphopantetheinyl transferase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01648
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01648_4-phosphopantetheinyl_transferase_superfamily


id: PF01656
description: CobQ/CobB/MinD/ParA nucleotide binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01656
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01656_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: PF01729
description: Quinolinate phosphoribosyl transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01729
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01729_Quinolinate_phosphoribosyl_transferase,_C-terminal_domain


id: PF01741
description: Large-conductance mechanosensitive channel, MscL
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01741
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01741_Large-conductance_mechanosensitive_channel,_MscL


id: PF01812
description: 5-formyltetrahydrofolate cyclo-ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01812
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01812_5-formyltetrahydrofolate_cyclo-ligase_family


id: PF01874
description: ATP:dephospho-CoA triphosphoribosyl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01874
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01874_ATP:dephospho-CoA_triphosphoribosyl_transferase_


id: PF01977
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01977
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF01977_3-octaprenyl-4-hydroxybenzoate_carboxy-lyase


id: PF02075
description: Crossover junction endodeoxyribonuclease RuvC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02075
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02075_Crossover_junction_endodeoxyribonuclease_RuvC


id: PF02086
description: D12 class N6 adenine-specific DNA methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02086
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02086_D12_class_N6_adenine-specific_DNA_methyltransferase


id: PF02113
description: D-Ala-D-Ala carboxypeptidase 3 (S13) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02113
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02113_D-Ala-D-Ala_carboxypeptidase_3_(S13)_family


id: PF02367
description: Threonylcarbamoyl adenosine biosynthesis protein TsaE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02367
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02367_Threonylcarbamoyl_adenosine_biosynthesis_protein_TsaE


id: PF02410
description: Ribosomal silencing factor during starvation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02410
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02410_Ribosomal_silencing_factor_during_starvation_


id: PF02482
description: Sigma 54 modulation protein / S30EA ribosomal protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02482
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02482_Sigma_54_modulation_protein_/_S30EA_ribosomal_protein


id: PF02537
description: CrcB-like protein, Camphor Resistance (CrcB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02537
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02537_CrcB-like_protein,_Camphor_Resistance_(CrcB)


id: PF02550
description: Acetyl-CoA hydrolase/transferase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02550
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02550_Acetyl-CoA_hydrolase/transferase_N-terminal_domain


id: PF02578
description: Multi-copper polyphenol oxidoreductase laccase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02578
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02578_Multi-copper_polyphenol_oxidoreductase_laccase


id: PF02617
description: ATP-dependent Clp protease adaptor protein ClpS
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02617
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02617_ATP-dependent_Clp_protease_adaptor_protein_ClpS


id: PF02636
description: Putative S-adenosyl-L-methionine-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02636
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02636_Putative_S-adenosyl-L-methionine-dependent_methyltransferase


id: PF02670
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02670
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02670_1-deoxy-D-xylulose_5-phosphate_reductoisomerase


id: PF02702
description: Osmosensitive K+ channel His kinase sensor domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02702
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02702_Osmosensitive_K+_channel_His_kinase_sensor_domain


id: PF02729
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02729
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02729_Aspartate/ornithine_carbamoyltransferase,_carbamoyl-P_binding_domain


id: PF02749
description: Quinolinate phosphoribosyl transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02749
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02749_Quinolinate_phosphoribosyl_transferase,_N-terminal_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02772
description: S-adenosylmethionine synthetase, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02772
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02772_S-adenosylmethionine_synthetase,_central_domain


id: PF02773
description: S-adenosylmethionine synthetase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02773
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02773_S-adenosylmethionine_synthetase,_C-terminal_domain


id: PF02774
description: Semialdehyde dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02774
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02774_Semialdehyde_dehydrogenase,_dimerisation_domain


id: PF02775
description: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02775
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02775_Thiamine_pyrophosphate_enzyme,_C-terminal_TPP_binding_domain


id: PF02776
description: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02776
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02776_Thiamine_pyrophosphate_enzyme,_N-terminal_TPP_binding_domain


id: PF02777
description: Iron/manganese superoxide dismutases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02777
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02777_Iron/manganese_superoxide_dismutases,_C-terminal_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02789
description: Cytosol aminopeptidase family, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02789
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02789_Cytosol_aminopeptidase_family,_N-terminal_domain


id: PF02798
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02798
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02798_Glutathione_S-transferase,_N-terminal_domain


id: PF02800
description: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02800
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02800_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain


id: PF02812
description: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02812
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02812_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: PF02823
description: ATP synthase, Delta/Epsilon chain, beta-sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02823
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02823_ATP_synthase,_Delta/Epsilon_chain,_beta-sandwich_domain


id: PF02826
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02826
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02826_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02885
description: Glycosyl transferase family, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02885
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02885_Glycosyl_transferase_family,_helical_bundle_domain


id: PF02912
description: Aminoacyl tRNA synthetase class II, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02912
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02912_Aminoacyl_tRNA_synthetase_class_II,_N-terminal_domain


id: PF02922
description: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02922
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02922_Carbohydrate-binding_module_48_(Isoamylase_N-terminal_domain)


id: PF02951
description: Prokaryotic glutathione synthetase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02951
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02951_Prokaryotic_glutathione_synthetase,_N-terminal_domain


id: PF02965
description: Vitamin B12 dependent methionine synthase, activation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02965
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF02965_Vitamin_B12_dependent_methionine_synthase,_activation_domain


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03205
description: Molybdopterin guanine dinucleotide synthesis protein B
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03205
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03205_Molybdopterin_guanine_dinucleotide_synthesis_protein_B


id: PF03279
description: Bacterial lipid A biosynthesis acyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03279
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03279_Bacterial_lipid_A_biosynthesis_acyltransferase


id: PF03331
description: UDP-3-O-acyl N-acetylglycosamine deacetylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03331
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03331_UDP-3-O-acyl_N-acetylglycosamine_deacetylase


id: PF03364
description: Polyketide cyclase / dehydrase and lipid transport
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03364
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03364_Polyketide_cyclase_/_dehydrase_and_lipid_transport


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03382
description: Mycoplasma protein of unknown function, DUF285
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03382
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03382_Mycoplasma_protein_of_unknown_function,_DUF285


id: PF03417
description: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03417
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03417_Acyl-coenzyme_A:6-aminopenicillanic_acid_acyl-transferase


id: PF03435
description: Saccharopine dehydrogenase NADP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03435
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03435_Saccharopine_dehydrogenase_NADP_binding_domain


id: PF03444
description: Winged helix-turn-helix transcription repressor, HrcA DNA-binding
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03444
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03444_Winged_helix-turn-helix_transcription_repressor,_HrcA_DNA-binding


id: PF03446
description: NAD binding domain of 6-phosphogluconate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03446
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03446_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: PF03447
description: Homoserine dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03447
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03447_Homoserine_dehydrogenase,_NAD_binding_domain


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03544
description: Gram-negative bacterial TonB protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03544
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03544_Gram-negative_bacterial_TonB_protein_C-terminal


id: PF03548
description: Outer membrane lipoprotein carrier protein LolA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03548
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03548_Outer_membrane_lipoprotein_carrier_protein_LolA


id: PF03588
description: Leucyl/phenylalanyl-tRNA protein transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03588
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03588_Leucyl/phenylalanyl-tRNA_protein_transferase


id: PF03709
description: Orn/Lys/Arg decarboxylase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03709
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03709_Orn/Lys/Arg_decarboxylase,_N-terminal_domain


id: PF03710
description: Glutamate-ammonia ligase adenylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03710
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03710_Glutamate-ammonia_ligase_adenylyltransferase


id: PF03711
description: Orn/Lys/Arg decarboxylase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03711
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03711_Orn/Lys/Arg_decarboxylase,_C-terminal_domain


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03740
description: Pyridoxal phosphate biosynthesis protein PdxJ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03740
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03740_Pyridoxal_phosphate_biosynthesis_protein_PdxJ


id: PF03807
description: NADP oxidoreductase coenzyme F420-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03807
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03807_NADP_oxidoreductase_coenzyme_F420-dependent


id: PF03872
description: Anti sigma-E protein RseA, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03872
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03872_Anti_sigma-E_protein_RseA,_N-terminal_domain


id: PF03886
description: ABC-type transport auxiliary lipoprotein component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03886
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03886_ABC-type_transport_auxiliary_lipoprotein_component


id: PF03894
description: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03894
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03894_D-xylulose_5-phosphate/D-fructose_6-phosphate_phosphoketolase


id: PF03950
description: tRNA synthetases class I (E and Q), anti-codon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03950
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03950_tRNA_synthetases_class_I_(E_and_Q),_anti-codon_binding_domain


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04020
description: Mycobacterial 4 TMS phage holin, superfamily IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04020
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04020_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: PF04079
description: Segregation and condensation complex subunit ScpB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04079
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04079_Segregation_and_condensation_complex_subunit_ScpB


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04166
description: Pyridoxal phosphate biosynthetic protein PdxA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04166
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04166_Pyridoxal_phosphate_biosynthetic_protein_PdxA


id: PF04187
description: Haem-binding uptake, Tiki superfamily, ChaN
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04187
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04187_Haem-binding_uptake,_Tiki_superfamily,_ChaN


id: PF04263
description: Thiamin pyrophosphokinase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04263
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04263_Thiamin_pyrophosphokinase,_catalytic_domain


id: PF04342
description: Putative member of DMT superfamily (DUF486)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04342
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04342_Putative_member_of_DMT_superfamily_(DUF486)


id: PF04357
description: TamB, inner membrane protein subunit of TAM complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04357
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04357_TamB,_inner_membrane_protein_subunit_of_TAM_complex


id: PF04375
description: HemX, putative uroporphyrinogen-III C-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04375
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04375_HemX,_putative_uroporphyrinogen-III_C-methyltransferase


id: PF04378
description: Ribosomal RNA large subunit methyltransferase D, RlmJ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04378
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04378_Ribosomal_RNA_large_subunit_methyltransferase_D,_RlmJ


id: PF04413
description: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04413
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04413_3-Deoxy-D-manno-octulosonic-acid_transferase_(kdotransferase)


id: PF04430
description: Protein of unknown function (DUF498/DUF598)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04430
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04430_Protein_of_unknown_function_(DUF498/DUF598)


id: PF04464
description: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04464
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04464_CDP-Glycerol:Poly(glycerophosphate)_glycerophosphotransferase_


id: PF04613
description: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04613
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04613_UDP-3-O-[3-hydroxymyristoyl]_glucosamine_N-acyltransferase,_LpxD__


id: PF04679
description: ATP dependent DNA ligase C terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04679
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04679_ATP_dependent_DNA_ligase_C_terminal_region________


id: PF04715
description: Anthranilate synthase component I, N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04715
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04715_Anthranilate_synthase_component_I,_N_terminal_region


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF04883
description: Bacteriophage HK97-gp10, putative tail-component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04883
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF04883_Bacteriophage_HK97-gp10,_putative_tail-component


id: PF05015
description: RelE-like toxin of type II toxin-antitoxin system HigB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05015
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF05015_RelE-like_toxin_of_type_II_toxin-antitoxin_system_HigB


id: PF05187
description: Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05187
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF05187_Electron_transfer_flavoprotein-ubiquinone_oxidoreductase,_4Fe-4S


id: PF05378
description: Hydantoinase/oxoprolinase N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05378
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF05378_Hydantoinase/oxoprolinase_N-terminal_region


id: PF05437
description: Branched-chain amino acid transport protein (AzlD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05437
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF05437_Branched-chain_amino_acid_transport_protein_(AzlD)


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF06026
description: Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06026
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06026_Ribose_5-phosphate_isomerase_A_(phosphoriboisomerase_A)


id: PF06035
description: Bacterial transglutaminase-like cysteine proteinase BTLCP
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06035
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06035_Bacterial_transglutaminase-like_cysteine_proteinase_BTLCP


id: PF06305
description: Lipopolysaccharide assembly protein A domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06305
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06305_Lipopolysaccharide_assembly_protein_A_domain


id: PF06325
description: Ribosomal protein L11 methyltransferase (PrmA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06325
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06325_Ribosomal_protein_L11_methyltransferase_(PrmA)


id: PF06719
description: AraC-type transcriptional regulator N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06719
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06719_AraC-type_transcriptional_regulator_N-terminus


id: PF06769
description: YoeB-like toxin of bacterial type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06769
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06769_YoeB-like_toxin_of_bacterial_type_II_toxin-antitoxin_system


id: PF06805
description: Bacteriophage lambda tail assembly protein I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06805
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06805_Bacteriophage_lambda_tail_assembly_protein_I


id: PF06833
description: Malonate decarboxylase gamma subunit (MdcE)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06833
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06833_Malonate_decarboxylase_gamma_subunit_(MdcE)


id: PF06857
description: Malonate decarboxylase delta subunit (MdcD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06857
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF06857_Malonate_decarboxylase_delta_subunit_(MdcD)


id: PF07332
description: Putative Actinobacterial Holin-X, holin superfamily III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07332
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF07332_Putative_Actinobacterial_Holin-X,_holin_superfamily_III


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07664
description: Ferrous iron transport protein B C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07664
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF07664_Ferrous_iron_transport_protein_B_C_terminus


id: PF07717
description: Oligonucleotide/oligosaccharide-binding (OB)-fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07717
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF07717_Oligonucleotide/oligosaccharide-binding_(OB)-fold


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF08139
description: Prokaryotic membrane lipoprotein lipid attachment site
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08139
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08139_Prokaryotic_membrane_lipoprotein_lipid_attachment_site


id: PF08267
description: Cobalamin-independent synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08267
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08267_Cobalamin-independent_synthase,_N-terminal_domain


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08361
description: MAATS-type transcriptional repressor, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08361
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08361_MAATS-type_transcriptional_repressor,_C-terminal_region


id: PF08364
description: Bacterial translation initiation factor IF-2 associated region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08364
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08364_Bacterial_translation_initiation_factor_IF-2_associated_region


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08546
description: Ketopantoate reductase PanE/ApbA C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08546
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08546_Ketopantoate_reductase_PanE/ApbA_C_terminal


id: PF08809
description: Phage related hypothetical protein (DUF1799)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08809
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08809_Phage_related_hypothetical_protein_(DUF1799)


id: PF08840
description: BAAT / Acyl-CoA thioester hydrolase C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08840
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF08840_BAAT_/_Acyl-CoA_thioester_hydrolase_C_terminal


id: PF09439
description: Signal recognition particle receptor beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09439
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09439_Signal_recognition_particle_receptor_beta_subunit


id: PF09604
description: F subunit of K+-transporting ATPase (Potass_KdpF)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09604
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09604_F_subunit_of_K+-transporting_ATPase_(Potass_KdpF)


id: PF09694
description: Bacterial protein of unknown function (Gcw_chp)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09694
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09694_Bacterial_protein_of_unknown_function_(Gcw_chp)


id: PF09718
description: Lambda phage tail tape-measure protein (Tape_meas_lam_C)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09718
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09718_Lambda_phage_tail_tape-measure_protein_(Tape_meas_lam_C)


id: PF09832
description: Uncharacterized protein conserved in bacteria (DUF2059)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09832
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09832_Uncharacterized_protein_conserved_in_bacteria_(DUF2059)


id: PF09864
description: Membrane-bound lysozyme-inhibitor of c-type lysozyme
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09864
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09864_Membrane-bound_lysozyme-inhibitor_of_c-type_lysozyme


id: PF09956
description: Uncharacterized conserved protein (DUF2190)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09956
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09956_Uncharacterized_conserved_protein_(DUF2190)


id: PF09998
description: Uncharacterized protein conserved in bacteria (DUF2239)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09998
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF09998_Uncharacterized_protein_conserved_in_bacteria_(DUF2239)


id: PF10116
description: Protein required for attachment to host cells
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10116
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF10116_Protein_required_for_attachment_to_host_cells


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10411
description: Disulfide bond isomerase protein N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10411
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF10411_Disulfide_bond_isomerase_protein_N-terminus


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10620
description: Phosphoribosyl-dephospho-CoA transferase MdcG
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10620
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF10620_Phosphoribosyl-dephospho-CoA_transferase_MdcG


id: PF10685
description: Stress-induced bacterial acidophilic repeat motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10685
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF10685_Stress-induced_bacterial_acidophilic_repeat_motif


id: PF11940
description: Domain of unknown function (DUF3458) Ig-like fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11940
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF11940_Domain_of_unknown_function_(DUF3458)_Ig-like_fold


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12170
description: DNA polymerase III tau subunit V interacting with alpha
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12170
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF12170_DNA_polymerase_III_tau_subunit_V_interacting_with_alpha


id: PF12535
description: Hydrolase of X-linked nucleoside diphosphate N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12535
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF12535_Hydrolase_of_X-linked_nucleoside_diphosphate_N_terminal_


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF13018
description: Extended Signal Peptide of Type V secretion system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13018
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13018_Extended_Signal_Peptide_of_Type_V_secretion_system


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13336
description: Acetyl-CoA hydrolase/transferase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13336
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13336_Acetyl-CoA_hydrolase/transferase_C-terminal_domain


id: PF13410
description: Glutathione S-transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13410
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13410_Glutathione_S-transferase,_C-terminal_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13540
description: Regulator of chromosome condensation (RCC1) repeat
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13540
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13540_Regulator_of_chromosome_condensation_(RCC1)_repeat


id: PF13597
description: Anaerobic ribonucleoside-triphosphate reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13597
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13597_Anaerobic_ribonucleoside-triphosphate_reductase


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13720
description: Udp N-acetylglucosamine O-acyltransferase; Domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13720
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13720_Udp_N-acetylglucosamine_O-acyltransferase;_Domain_2


id: PF13722
description: 5TM C-terminal transporter carbon starvation CstA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13722
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13722_5TM_C-terminal_transporter_carbon_starvation_CstA


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF14213
description: STAS-like domain of unknown function (DUF4325)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14213
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14213_STAS-like_domain_of_unknown_function_(DUF4325)


id: PF14246
description: AefR-like transcriptional repressor, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14246
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14246_AefR-like_transcriptional_repressor,_C-terminal_domain


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14718
description: Soluble lytic murein transglycosylase L domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14718
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14718_Soluble_lytic_murein_transglycosylase_L_domain


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14805
description: Tetrahydrodipicolinate N-succinyltransferase N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14805
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14805_Tetrahydrodipicolinate_N-succinyltransferase_N-terminal


id: PF14819
description: Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14819
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14819_Nitrile_reductase,_7-cyano-7-deazaguanine-reductase_N-term


id: PF14833
description: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14833
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF14833_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase


id: PF16123
description: Hydroxyacylglutathione hydrolase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16123
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16123_Hydroxyacylglutathione_hydrolase_C-terminus


id: PF16168
description: Adhesin of bacterial autotransporter system, probable stalk
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16168
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16168_Adhesin_of_bacterial_autotransporter_system,_probable_stalk_


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16491
description: CAAX prenyl protease N-terminal, five membrane helices
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16491
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16491_CAAX_prenyl_protease_N-terminal,_five_membrane_helices


id: PF16524
description: Periplasmic domain of Sensor histidine kinase RisS
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16524
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16524_Periplasmic_domain_of_Sensor_histidine_kinase_RisS


id: PF16576
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16576
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16576_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16654
description: Diaminopimelic acid dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16654
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16654_Diaminopimelic_acid_dehydrogenase_C-terminal_domain


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF16754
description: Bacterial toxin homologue of phage lysozyme, C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16754
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16754_Bacterial_toxin_homologue_of_phage_lysozyme,_C-term


id: PF16822
description: SGNH hydrolase-like domain, acetyltransferase AlgX
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16822
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16822_SGNH_hydrolase-like_domain,_acetyltransferase_AlgX


id: PF16957
description: Malonate decarboxylase, alpha subunit, transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16957
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF16957_Malonate_decarboxylase,_alpha_subunit,_transporter


id: PF17125
description: N-terminal domain of 16S rRNA methyltransferase RsmF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17125
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF17125_N-terminal_domain_of_16S_rRNA_methyltransferase_RsmF


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17167
description: Glycosyl hydrolase 36 superfamily, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17167
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF17167_Glycosyl_hydrolase_36_superfamily,_catalytic_domain


id: PF17432
description: Domain of unknown function (DUF3458_C) ARM repeats
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17432
name:
  Protein Domains (Pfam).STRING_v12.0_847_STRINGid_PF17432_Domain_of_unknown_function_(DUF3458_C)_ARM_repeats


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00562
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00833
description: Cobalamin synthesis protein cobW C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00833
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00833_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00847
description: Helicase associated domain (HA2) Add an annotation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00847
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00847_Helicase_associated_domain_(HA2)__Add_an_annotation


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00936
description: Penicillin-binding protein 5, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00936
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00936_Penicillin-binding_protein_5,_C-terminal_domain


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00956
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00978
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00978
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00978_Tim44_is_an_essential_component_of_the_machinery_that_mediates_the_translocation_of_nuclear-encoded_proteins_across_the_mitochondrial_inner_membrane_PUBMED:10430866._Tim44_is_thought_to_bind_phospholipids_of_the_mitochondrial_inner_membrane_both_by_...

description:
  Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane PUBMED:10430866. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by ...


id: SM00981
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00982
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01103
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01103
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01103_Escherichia_coli_YhbY_is_associated_with_pre-50S_ribosomal_subunits,_which_implies_a_function_in_ribosome_assembly._GFP_fused_to_a_single-domain_CRM_protein_from_maize_localises_to_the_nucleolus,_suggesting_that_an_analogous_activity_may_have_been_...

description:
  Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been ...


id: SM01131
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01131
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01131_This_domain_is_often_found_adjacent_to_the_DHH_domain_PF01368_and_is_called_DHHA2_for_DHH_associated_domain._This_domain_is_diagnostic_of_DHH_subfamily_2_members_(PUBMED:9478130)._The_domain_is_about_120_residues_long_and_contains_a_conserved_DXK_...

description:
  This domain is often found adjacent to the DHH domain PF01368 and is called DHHA2 for DHH associated domain. This domain is diagnostic of DHH subfamily 2 members (PUBMED:9478130). The domain is about 120 residues long and contains a conserved DXK ...


id: SM01204
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01204
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01204_The_FIST_C_domain_is_a_novel_sensory_domain,_which_is_present_in_signal_transduction_proteins_from_Bacteria,_Archaea_and_Eukarya._Chromosomal_proximity_of_FIST-encoding_genes_to_those_coding_for_proteins_involved_in_amino_acid_metabolism_and_...

description:
  The FIST C domain is a novel sensory domain, which is present in signal transduction proteins from Bacteria, Archaea and Eukarya. Chromosomal proximity of FIST-encoding genes to those coding for proteins involved in amino acid metabolism and ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01252
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01252
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01252_Conserved_DNA-binding_domain_that_is_found_in_a_wide_range_of_proteins_of_large_bacterial_and_eukaryotic_DNA_viruses.

description:
  Conserved DNA-binding domain that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses.


id: SM01322
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01322
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01322_This_family_consists_of_several_hypothetical_bacterial_proteins_of_around_180_residues_in_length_which_are_often_known_as_YaeQ._YaeQ_is_homologous_to_RfaH,_a_specialised_transcription_elongation_protein._YaeQ_is_known_to_compensate_for_loss_of_RfaH_...

description:
  This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialised transcription elongation protein. YaeQ is known to compensate for loss of RfaH ...


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_847_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


