# geneInfo

ensembl_gene_id: Turpa_0030
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Turpa_0031
symbol: AFM10694.1
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013105; KEGG: lbl:LBL_0308 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0032
symbol: AFM10695.1
gene_biotype: protein_coding
description:
  PFAM: Tetratricopeptide repeat; InterPro IPR013105; KEGG: lic:LIC10326 hypothetical protein; PFAM: Tetratricopeptide TPR2; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0033
symbol: AFM10696.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); COGs: COG0708 Exonuclease III; InterPro IPR000097:IPR004808:IPR005135; KEGG: str:Sterm_0377 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1.


ensembl_gene_id: Turpa_0037
symbol: AFM10700.1
gene_biotype: protein_coding
description:
  Transposase IS3/IS911 family protein; PFAM: Transposase; InterPro IPR002514; KEGG: nmu:Nmul_A2173 transposase IS3/IS911; PFAM: Transposase IS3/IS911; SPTR: Transposase IS3/IS911.


ensembl_gene_id: Turpa_0038
symbol: AFM10701.1
gene_biotype: protein_coding
description:
  Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: nmu:Nmul_A2405 integrase catalytic subunit; PFAM: Integrase, catalytic core; SPTR: Integrase, catalytic region; manually curated.


ensembl_gene_id: Turpa_0042
symbol: AFM10705.1
gene_biotype: protein_coding
description:
  Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: ISSod13 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase.


ensembl_gene_id: Turpa_0044
symbol: AFM10707.1
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; PFAM: ThiF family; InterPro IPR000594; KEGG: sat:SYN_01833 HesA/MoeB/ThiF type protein; PFAM: UBA/THIF-type NAD/FAD binding fold; SPTR: HesA/moeB/thiF type protein.


ensembl_gene_id: Turpa_0047
symbol: AFM10710.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: das:Daes_0408 radical SAM domain-containing protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein.


ensembl_gene_id: Turpa_0048
symbol: AFM10711.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: das:Daes_0406 family 2 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2.


ensembl_gene_id: Turpa_0050
symbol: AFM10713.1
gene_biotype: protein_coding
description:
  Delta-60 repeat-containing protein; TIGRFAM: delta-60 repeat domain; InterPro IPR003961:IPR013431; KEGG: ote:Oter_0312 hypothetical protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Putative uncharacterized protein; TIGRFAM: Delta-60 repeat.


ensembl_gene_id: Turpa_0053
symbol: AFM10716.1
gene_biotype: protein_coding
description:
  PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001:IPR007409:IPR006935; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; SPTR: DEAD/DEAH box helicase.


ensembl_gene_id: Turpa_0054
symbol: AFM10717.1
gene_biotype: protein_coding
description:
  Transposase IS200-family protein; PFAM: Transposase IS200 like; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: rrs:RoseRS_0733 transposase IS200-family protein; PFAM: Transposase IS200-like; SPTR: Transposase IS200-family protein.


ensembl_gene_id: Turpa_0055
symbol: AFM10718.1
gene_biotype: protein_coding
description:
  PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: xca:xccb100_3278 type I site-specific deoxyribonuclease (specificity subunit); PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Putative restriction endonuclease S subunits.


ensembl_gene_id: Turpa_0056
symbol: AFM10719.1
gene_biotype: protein_coding
description:
  PFAM: Abi-like protein; COGs: COG4823 Abortive infection bacteriophage resistance protein; InterPro IPR011664; KEGG: plm:Plim_3524 Abi family protein; PFAM: Abortive infection bacteriophage resistance related; SPTR: AbiD phage protein-like protein.


ensembl_gene_id: Turpa_0058
symbol: AFM10721.1
gene_biotype: protein_coding
description:
  PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: mfa:Mfla_2604 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: N-6 DNA methylase.


ensembl_gene_id: Turpa_0059
symbol: AFM10722.1
gene_biotype: protein_coding
description:
  Integrase catalytic region; PFAM: Integrase core domain; COGs: COG2826 Transposase and inactivated derivatives IS30 family; InterPro IPR001584; KEGG: abc:ACICU_02563 IS30 family transposase; PFAM: Integrase, catalytic core; SPTR: Transposase of ISCARN114, IS30 family.


ensembl_gene_id: Turpa_0061
symbol: AFM10724.1
gene_biotype: protein_coding
description:
  Ankyrin; InterPro IPR002110; KEGG: xtr:100497775 ankyrin-1-like; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Remark: ankyrin repeats are believed to mediate protein-protein interactions.


ensembl_gene_id: Turpa_0065
symbol: AFM10728.1
gene_biotype: protein_coding
description:
  Gp37Gp68 family protein; PFAM: Phage protein Gp37/Gp68; COGs: COG4422 Bacteriophage protein gp37; InterPro IPR011101; KEGG: chu:CHU_3680 ABC transporter; PFAM: Phage Gp37Gp68; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0067
symbol: AFM10730.1
gene_biotype: protein_coding
description:
  PFAM: ParB-like nuclease domain; InterPro IPR003115; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.


ensembl_gene_id: Turpa_0069
symbol: AFM10732.1
gene_biotype: protein_coding
description:
  RNA-directed DNA polymerase (Reverse transcriptase); PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); InterPro IPR000477; KEGG: hmo:HM1_0639 reverse transcriptase family protein; PFAM: RNA-directed DNA polymerase (reverse transcriptase); SPTR: RNA-directed DNA polymerase.


ensembl_gene_id: Turpa_0071
symbol: AFM10734.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afo:Afer_1025 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; SPTR: Mobile intron protein.


ensembl_gene_id: Turpa_0075
symbol: AFM10738.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF1738); COGs: COG4227 Antirestriction protein; InterPro IPR013610; KEGG: dpr:Despr_0136 hypothetical protein; PFAM: Domain of unknown function DUF1738; SPTR: Antirestriction protein.


ensembl_gene_id: Turpa_0077
symbol: AFM10739.1
gene_biotype: protein_coding
description:
  PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: lil:LA_0891 NADH dehydrogenase (ubiquinone) chain E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) chain E; TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit.


ensembl_gene_id: Turpa_0078
symbol: AFM10740.1
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; COGs: COG0560 Phosphoserine phosphatase; InterPro IPR006385:IPR005834; KEGG: mxa:MXAN_2679 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial.


ensembl_gene_id: Turpa_0079
symbol: AFM10741.1
gene_biotype: protein_coding
description:
  PFAM: DNA polymerase family B; COGs: COG0417 DNA polymerase elongation subunit (family B); InterPro IPR006172:IPR006134; KEGG: lbf:LBF_2104 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase, family B, conserved region; SMART: DNA-directed DNA polymerase, family B; SPTR: Putative DNA polymerase.


ensembl_gene_id: Turpa_0084
symbol: AFM10746.1
gene_biotype: protein_coding
description:
  Transcriptional repressor, LexA family; PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR006199:IPR019759; KEGG: lic:LIC12654 LexA family transcriptional repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; LexA DNA-binding region; SPTR: Transcriptional repressor (LexA family).


ensembl_gene_id: Turpa_0085
symbol: AFM10747.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Cysteine rich repeat; KEGG: bba:Bd1719 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0086
symbol: AFM10748.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial SH3 domain; InterPro IPR003646:IPR013247; PFAM: SH3, type 3; SMART: Bacterial SH3-like region.


ensembl_gene_id: Turpa_0087
symbol: AFM10749.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cao:Celal_3760 pkd domain containing protein; SPTR: PKD domain containing protein.


ensembl_gene_id: Turpa_0088
symbol: AFM10750.1
gene_biotype: protein_coding
description:
  PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR019574; KEGG: lbf:LBF_3290 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; SPTR: NADH-quinone oxidoreductase chain G.


ensembl_gene_id: Turpa_0089
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Turpa_0090
symbol: AFM10752.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: lbf:LBF_0212 metalloendoprotease; PFAM: Peptidase M23; SPTR: Putative metalloendopeptidase.


ensembl_gene_id: Turpa_0091
symbol: AFM10753.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: mtt:Ftrac_1830 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2.


ensembl_gene_id: Turpa_0092
symbol: AFM10754.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: lbf:LBF_1486 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative S-adenosylmethionine-dependent methyltransferase.


ensembl_gene_id: Turpa_0093
symbol: AFM10755.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: lil:LA_2661 methylase/methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methylase/methyltransferase.


ensembl_gene_id: Turpa_0094
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Turpa_0095
symbol: AFM10757.1
gene_biotype: protein_coding
description:
  PFAM: YhhN-like protein; COGs: COG3714 membrane protein; InterPro IPR012506; KEGG: fjo:Fjoh_3510 YhhN family protein; PFAM: YhhN-like; SPTR: YhhN family protein.


ensembl_gene_id: Turpa_0096
symbol: AFM10758.1
gene_biotype: protein_coding
description:
  L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: Turpa_0097
symbol: AFM10759.1
gene_biotype: protein_coding
description:
  PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: cre:CHLREDRAFT_24268 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine gamma-synthase.


ensembl_gene_id: Turpa_0098
symbol: AFM10760.1
gene_biotype: protein_coding
description:
  PFAM: MASE1; COGs: COG3447 integral membrane sensor domain; InterPro IPR007895; KEGG: lbf:LBF_0690 serine phosphatase RsbU; PFAM: MASE1; SPTR: Putative phosphoserine phosphatase; putative membrane protein.


ensembl_gene_id: Turpa_0099
symbol: AFM10761.1
gene_biotype: protein_coding
description:
  Integral membrane sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; MASE1; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789:IPR007895; KEGG: glo:Glov_0565 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; MASE1; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal  [...]


ensembl_gene_id: Turpa_0100
symbol: AFM10762.1
gene_biotype: protein_coding
description:
  PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656; KEGG: dps:DP0446 C4-dicarboxylate permease large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Probable C4-dicarboxylate permease (Large subunit), probably cold-shock inducible.


ensembl_gene_id: Turpa_0101
symbol: AFM10763.1
gene_biotype: protein_coding
description:
  TIGRFAM: gliding motility-associated protein GldC; KEGG: gca:Galf_1844 gliding motility-associated protein GldC; SPTR: Gliding motility-associated protein GldC.


ensembl_gene_id: Turpa_0103
symbol: AFM10765.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: lbf:LBF_0965 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Putative adenylate cyclase.


ensembl_gene_id: Turpa_0104
symbol: AFM10766.1
gene_biotype: protein_coding
description:
  PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: azo:azo2831 hypothetical protein; PFAM: Polyphosphate kinase 2; SPTR: Putative uncharacterized protein; TIGRFAM: polyphosphate:AMP phosphotransferase.


ensembl_gene_id: Turpa_0105
symbol: AFM10767.1
gene_biotype: protein_coding
description:
  PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829; KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde- [...]


ensembl_gene_id: Turpa_0107
symbol: AFM10769.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: lbf:LBF_1824 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: Long-chain acyl-CoA synthetase, AMP-forming.


ensembl_gene_id: Turpa_0108
symbol: AFM10770.1
gene_biotype: protein_coding
description:
  PFAM: NUDIX domain; InterPro IPR000086; KEGG: lic:LIC13180 (di)nucleoside polyphosphate hydrolase; PFAM: NUDIX hydrolase domain; SPTR: (Di)nucleoside polyphosphate hydrolase; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Turpa_0110
symbol: AFM10772.1
gene_biotype: protein_coding
description:
  UPF0235 protein yggU; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: TIGR00251 family protein; COGs: COG1872 conserved hypothetical protein; HAMAP: Protein of unknown function DUF167; InterPro IPR003746; KEGG: mab:MAB_1946 hypothetical protein; PFAM: Protein of unknown function DUF167; SPTR: UPF0235 protein MC7420_7730; Belongs to the UPF0235 family.


ensembl_gene_id: Turpa_0111
symbol: AFM10773.1
gene_biotype: protein_coding
description:
  PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: fba:FIC_00199 predicted thioesterase; PFAM: Thioesterase superfamily; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0113
symbol: AFM10775.1
gene_biotype: protein_coding
description:
  PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: lbf:LBF_2463 aspartate/tyrosine/aromatic aminotransferase; PFAM: Aminotransferase, class I/II; SPTR: Aspartate aminotransferase A (Transaminase A; AspAT).


ensembl_gene_id: Turpa_0114
symbol: AFM10776.1
gene_biotype: protein_coding
description:
  COGs: COG4270 membrane protein; KEGG: lbl:LBL_0554 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0115
symbol: AFM10777.1
gene_biotype: protein_coding
description:
  PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR004785:IPR003500; KEGG: dap:Dacet_1918 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; SPTR: Sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B.


ensembl_gene_id: Turpa_0117
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein; PFAM: Peptidase family M48; COGs: COG0501 Zn-dependent protease with chaperone function; HAMAP: protease htpX; InterPro IPR009481:IPR001915; KEGG: lbl:LBL_4186 heat shock protein HtpX; SPTR: Protease HtpX homolog; Belongs to the peptidase M48B family.


ensembl_gene_id: Turpa_0120
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Turpa_0121
symbol: AFM10783.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; PFAM: Metalloenzyme superfamily; InterPro IPR006124; KEGG: lbf:LBF_2306 hypothetical protein; PFAM: Metalloenzyme; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0122
symbol: AFM10784.1
gene_biotype: protein_coding
description:
  PFAM: HD domain; Ppx/GppA phosphatase family; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695:IPR006674; KEGG: mma:MM_1376 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Exopolyphosphatase.


ensembl_gene_id: Turpa_0123
symbol: AFM10785.1
gene_biotype: protein_coding
description:
  PFAM: Sulfatase; COGs: COG3083 hydrolase of alkaline phosphatase superfamily; InterPro IPR000917; KEGG: rxy:Rxyl_0662 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase.


ensembl_gene_id: Turpa_0124
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Turpa_0125
symbol: AFM10787.1
gene_biotype: protein_coding
description:
  PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: hor:Hore_12890 DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; SPTR: DNA polymerase III subunit delta.


ensembl_gene_id: Turpa_0126
symbol: AFM10788.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: ade:Adeh_1256 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain (CNMP-BD) protein.


ensembl_gene_id: Turpa_0127
symbol: AFM10789.1
gene_biotype: protein_coding
description:
  PFAM: Transcriptional Coactivator p15 (PC4); InterPro IPR003173; KEGG: lil:LA_4329 transcriptional coactivator-like protein; PFAM: Transcriptional coactivator p15; SPTR: Transcriptional coactivator-like protein.


ensembl_gene_id: Turpa_0129
symbol: AFM10791.1
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: gme:Gmet_1225 histidine triad (HIT) protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad (HIT) protein.


ensembl_gene_id: Turpa_0131
symbol: AFM10793.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: wch:wcw_0430 pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: Turpa_0132
symbol: mtnP
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: Turpa_0133
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: Turpa_0134
symbol: AFM10796.1
gene_biotype: protein_coding
description:
  Hypothetical protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902.


ensembl_gene_id: Turpa_0135
symbol: AFM10797.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: lbf:LBF_1630 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0136
symbol: AFM10798.1
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR012902; KEGG: lbl:LBL_1639 type II secretory pathway component; SPTR: Type II secretory pathway component.


ensembl_gene_id: Turpa_0137
symbol: AFM10799.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase, anaerobic; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR004559:IPR007197:IPR010723; KEGG: dal:Dalk_1108 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; manually curated.


ensembl_gene_id: Turpa_0139
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: Turpa_0140
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: Turpa_0142
symbol: AFM10804.1
gene_biotype: protein_coding
description:
  PFAM: Flavoprotein; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382; KEGG: ehi:EHI_164490 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: Flavoprotein; SPTR: Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, putative.


ensembl_gene_id: Turpa_0144
symbol: AFM10806.1
gene_biotype: protein_coding
description:
  PFAM: CBS domain; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: sjp:SJA_C1-00690 CBS domain protein; PFAM: Cystathionine beta-synthase, core; SPTR: CBS domain protein.


ensembl_gene_id: Turpa_0145
symbol: AFM10807.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1577); InterPro IPR011471; KEGG: lbl:LBL_1755 hypothetical protein; PFAM: Protein of unknown function DUF1577; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0146
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Turpa_0148
symbol: AFM10810.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_0149
symbol: AFM10811.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Predicted metal-dependent hydrolase; COGs: COG3687 metal-dependent hydrolase; InterPro IPR016516; KEGG: gpb:HDN1F_29460 hypothetical protein; PFAM: Uncharacterised conserved protein UCP07580; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0150
symbol: AFM10812.1
gene_biotype: protein_coding
description:
  PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: cpb:Cphamn1_1571 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_0151
symbol: AFM10813.1
gene_biotype: protein_coding
description:
  PFAM: Putative addiction module component; TIGRFAM: putative addiction module component, TIGR02574 family; InterPro IPR013406; TIGRFAM: Addiction module component, CHP02574.


ensembl_gene_id: Turpa_0152
symbol: AFM10814.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF985; PFAM: Cupin superfamily (DUF985); COGs: COG3542 conserved hypothetical protein; InterPro IPR009327; KEGG: fra:Francci3_3686 hypothetical protein; PFAM: Protein of unknown function DUF985; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0153
symbol: AFM10815.1
gene_biotype: protein_coding
description:
  PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: nde:NIDE0047 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase.


ensembl_gene_id: Turpa_0154
symbol: vapC
gene_biotype: protein_coding
description:
  PIN domain protein family protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: Turpa_0156
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: Turpa_0157
symbol: AFM10819.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function, DUF400; KEGG: bhy:BHWA1_01473 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0158
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR001278:IPR005148:IPR015945:IPR008909; KEGG: lbl:LBL_1256 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic.


ensembl_gene_id: Turpa_0159
symbol: AFM10821.1
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: dal:Dalk_3200 beta-lactamase domain protein; SPTR: Beta-lactamase-like.


ensembl_gene_id: Turpa_0160
symbol: aat
gene_biotype: protein_coding
description:
  Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: Turpa_0162
symbol: AFM10824.1
gene_biotype: protein_coding
description:
  PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: lil:LA_0966 exodeoxyribonuclease V subunit beta; PFAM: DNA helicase, UvrD/REP type; SPTR: Exodeoxyribonuclease V beta chain.


ensembl_gene_id: Turpa_0163
symbol: AFM10825.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Putative ATPase (DUF699); Viral (Superfamily 1) RNA helicase; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: tkm:TK90_1623 exodeoxyribonuclease V, alpha subunit; SPTR: Exodeoxyribonuclease V, alpha subunit.


ensembl_gene_id: Turpa_0166
symbol: AFM10828.1
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR018391; KEGG: mst:Msp_0197 hypothetical protein; SPTR: Conserved hypothetical membrane-spanning protein.


ensembl_gene_id: Turpa_0167
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Turpa_0169
symbol: AFM10831.1
gene_biotype: protein_coding
description:
  PFAM: CutA1 divalent ion tolerance protein; COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations; InterPro IPR004323; KEGG: fbl:Fbal_0481 CutA1 divalent ion tolerance protein; PFAM: Divalent ion tolerance protein, CutA1; SPTR: CutA1 divalent ion tolerance protein; manually curated.


ensembl_gene_id: Turpa_0170
symbol: AFM10832.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1574); KEGG: lbf:LBF_0173 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0171
symbol: AFM10833.1
gene_biotype: protein_coding
description:
  PFAM: MBOAT family; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: lbf:LBF_2987 DltB-like membrane protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Putative membrane bound 0-acyl transferase, putative alginate biosynthesis protein; putative membrane protein; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: Turpa_0172
symbol: AFM10834.1
gene_biotype: protein_coding
description:
  Hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; COGs: COG2703 Hemerythrin; InterPro IPR012827:IPR012312; KEGG: mhu:Mhun_2752 hemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin-like, metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding.


ensembl_gene_id: Turpa_0174
symbol: AFM10836.1
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; COGs: COG0625 Glutathione S-transferase; InterPro IPR004045:IPR004046; KEGG: lbf:LBF_1853 glutathione transferase; PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; SPTR: Putative glutathione S-transferase protein.


ensembl_gene_id: Turpa_0175
symbol: AFM10837.1
gene_biotype: protein_coding
description:
  SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013486:IPR013693; KEGG: gsu:GSU2621 stage II sporulation-related protein; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal; SPTR: Cell division protein, putative; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB.


ensembl_gene_id: Turpa_0176
symbol: AFM10838.1
gene_biotype: protein_coding
description:
  PFAM: Phosphatidylglycerophosphatase A; COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: acm:AciX9_1037 phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0178
symbol: AFM10840.1
gene_biotype: protein_coding
description:
  Helix-turn-helix Fis-type; PFAM: Bacterial regulatory protein, Fis family; InterPro IPR000644:IPR002197; PFAM: Helix-turn-helix, Fis-type; Cystathionine beta-synthase, core.


ensembl_gene_id: Turpa_0179
symbol: AFM10841.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: lil:LA_4039 lauroyl/myristoyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lauroyl/myristoyl acyltransferase.


ensembl_gene_id: Turpa_0181
symbol: AFM10843.1
gene_biotype: protein_coding
description:
  PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: lbl:LBL_1610 cysteine sulfinate desulfinase or cysteine desulfhydrase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine sulfinate desulfinase or Cysteine desulfhydrase.


ensembl_gene_id: Turpa_0184
symbol: AFM10846.1
gene_biotype: protein_coding
description:
  PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: sus:Acid_4232 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein.


ensembl_gene_id: Turpa_0185
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: Turpa_0188
symbol: AFM10850.1
gene_biotype: protein_coding
description:
  PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: agr:AGROH133_05212 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase.


ensembl_gene_id: Turpa_0189
symbol: AFM10851.1
gene_biotype: protein_coding
description:
  DoxX family protein; PFAM: DoxX; InterPro IPR011637; KEGG: nde:NIDE0008 hypothetical protein; PFAM: DoxX; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0190
symbol: AFM10852.1
gene_biotype: protein_coding
description:
  InterPro IPR000835; KEGG: fal:FRAAL6084 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Putative MarR-family transcriptional regulator.


ensembl_gene_id: Turpa_0193
symbol: AFM10855.1
gene_biotype: protein_coding
description:
  Sulfate transporter/antisigma-factor antagonist STAS; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645; KEGG: lbl:LBL_2243 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist.


ensembl_gene_id: Turpa_0194
symbol: AFM10856.1
gene_biotype: protein_coding
description:
  PFAM: Aldo/keto reductase family; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: app:CAP2UW1_3204 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase.


ensembl_gene_id: Turpa_0195
symbol: AFM10857.1
gene_biotype: protein_coding
description:
  Delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase; COGs: COG1398 Fatty-acid desaturase; InterPro IPR005804; KEGG: mtt:Ftrac_2304 delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Delta-9 acyl-phospholipid desaturase.


ensembl_gene_id: Turpa_0196
symbol: AFM10858.1
gene_biotype: protein_coding
description:
  TIGRFAM: clan AA aspartic protease, AF_0612 family; KEGG: syn:slr0890 hypothetical protein; SPTR: Slr0890 protein; TIGRFAM: clan AA aspartic protease, AF_0612 family.


ensembl_gene_id: Turpa_0197
symbol: AFM10859.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: lbf:LBF_1749 Fe-S oxidoreductase; PFAM: Cysteine-rich region, CCG; SPTR: Putative CoB--CoM heterodisulfide reductase; putative membrane protein.


ensembl_gene_id: Turpa_0198
symbol: AFM10860.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dal:Dalk_0029 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcription regulator, AraC family.


ensembl_gene_id: Turpa_0199
symbol: AFM10861.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: lbf:LBF_2835 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: AMP-binding enzyme, putative.


ensembl_gene_id: Turpa_0200
symbol: AFM10862.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: abo:ABO_0189 short chain dehydrogenase, putative; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Probable short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_0201
symbol: AFM10863.1
gene_biotype: protein_coding
description:
  Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: spu:761600 similar to ankyrin 2,3/unc44; PFAM: Ankyrin repeat; SPTR: Ankyrin repeat protein, putative.


ensembl_gene_id: Turpa_0202
symbol: AFM10864.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl hydrolase family 1; COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360; KEGG: dth:DICTH_0359 beta-glucosidase A; PFAM: Glycoside hydrolase, family 1; SPTR: Beta-glucosidase A.


ensembl_gene_id: Turpa_0204
symbol: AFM10866.1
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: pla:Plav_1671 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase.


ensembl_gene_id: Turpa_0205
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: Turpa_0206
symbol: AFM10868.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; KEGG: lbl:LBL_0257 anti-sigma regulatory factor; SPTR: Anti-sigma regulatory factor.


ensembl_gene_id: Turpa_0207
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: Turpa_0208
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Turpa_0209
symbol: AFM10871.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Proteobacterial lipase chaperone protein; KEGG: lil:LA_1125 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0212
symbol: AFM10872.1
gene_biotype: protein_coding
description:
  PFAM: Stage II sporulation protein E (SpoIIE); InterPro IPR001932:IPR010822; KEGG: lbi:LEPBI_I2680 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0213
symbol: AFM10873.1
gene_biotype: protein_coding
description:
  Cell division FtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593:IPR002543:IPR018541; KEGG: lbf:LBF_1339 cell division protein with ATPase domain; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase, AAA+ type, core; SPTR: DNA translocase ftsK; putative membrane protein; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: Turpa_0214
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: Turpa_0215
symbol: AFM10875.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Turpa_0216
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: Turpa_0218
symbol: AFM10878.1
gene_biotype: protein_coding
description:
  PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: hoh:Hoch_4648 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; TC 2.C.1.1.1.


ensembl_gene_id: Turpa_0219
symbol: AFM10879.1
gene_biotype: protein_coding
description:
  PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: rpf:Rpic12D_4694 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR.


ensembl_gene_id: Turpa_0220
symbol: AFM10880.1
gene_biotype: protein_coding
description:
  TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: lbf:LBF_0143 TonB-like protein; SPTR: TonB protein; TIGRFAM: TonB, C-terminal.


ensembl_gene_id: Turpa_0221
symbol: AFM10881.1
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cts:Ctha_1737 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor.


ensembl_gene_id: Turpa_0225
symbol: AFM10885.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: phosphate binding protein; COGs: COG0226 ABC-type phosphate transport system periplasmic component; KEGG: lbf:LBF_3050 phosphate ABC transporter protein PstS; SPTR: Putative ABC-type transport system, periplasmic phosphate-binding protein.


ensembl_gene_id: Turpa_0226
symbol: AFM10886.1
gene_biotype: protein_coding
description:
  Regulatory protein MarR; InterPro IPR000835; KEGG: rme:Rmet_3441 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family.


ensembl_gene_id: Turpa_0227
symbol: AFM10887.1
gene_biotype: protein_coding
description:
  Pyridoxal-5'-phosphate-dependent protein beta subunit; COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: lby:Lbys_1325 pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Pyridoxal-5'-phosphate-dependent protein beta subunit.


ensembl_gene_id: Turpa_0229
symbol: AFM10889.1
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR006638:IPR005839:IPR006467:IPR013848:IPR007197; KEGG: lbf:LBF_2491 2-methylthioadenine synthetase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase.


ensembl_gene_id: Turpa_0230
symbol: AFM10890.1
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase family protein.


ensembl_gene_id: Turpa_0232
symbol: AFM10892.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterPro IPR014001:IPR001650:IPR011545:IPR018973; KEGG: tmr:Tmar_1056 DEAD/DEAH box helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Protein of unknown function DUF1998; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein.


ensembl_gene_id: Turpa_0233
symbol: AFM10893.1
gene_biotype: protein_coding
description:
  PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; COGs: COG3608 deacylase; InterPro IPR007036; KEGG: ttu:TERTU_1092 succinylglutamate desuccinylase / aspartoacylase family protein; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase / Aspartoacylase family protein.


ensembl_gene_id: Turpa_0235
symbol: AFM10895.1
gene_biotype: protein_coding
description:
  Translation factor SUA5; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR004388:IPR006070; KEGG: eba:ebA6128 putative translation factor YrdC/SUA5; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Putative translation factor YrdC/SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC; Belongs to the SUA5 family.


ensembl_gene_id: Turpa_0236
symbol: AFM10896.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: hch:HCH_01977 short-chain alcohol dehydrogenase of unknown specificity; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Putative uncharacterized protein; manually curated; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_0237
symbol: AFM10897.1
gene_biotype: protein_coding
description:
  Type IV pilus assembly PilZ; PFAM: PilZ domain; InterPro IPR009875; KEGG: lbf:LBF_1289 hypothetical protein; PFAM: Type IV pilus assembly PilZ; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0238
symbol: leuS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR015413:IPR013155; KEGG: gtn:GTNG_2742 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class I (M); SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial.


ensembl_gene_id: Turpa_0239
symbol: AFM10899.1
gene_biotype: protein_coding
description:
  PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: chy:CHY_0730 5-formyltetrahydrofolate cyclo-ligase family protein; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase family protein.


ensembl_gene_id: Turpa_0241
symbol: AFM10901.1
gene_biotype: protein_coding
description:
  PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); InterPro IPR000424; KEGG: lin:lin2667 hypothetical protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein.


ensembl_gene_id: Turpa_0242
symbol: AFM10902.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099; KEGG: xce:Xcel_1969 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.


ensembl_gene_id: Turpa_0243
symbol: AFM10903.1
gene_biotype: protein_coding
description:
  PFAM: Radical SAM superfamily; HemN C-terminal region; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: adg:Adeg_0603 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative oxygen-independent coproporphyrinogen III oxidase.


ensembl_gene_id: Turpa_0244
symbol: AFM10904.1
gene_biotype: protein_coding
description:
  PFAM: FG-GAP repeat; InterPro IPR013519:IPR013517; KEGG: lil:LA_1499 cytoplasmic membrane protein; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor; SPTR: Cytoplasmic membrane protein.


ensembl_gene_id: Turpa_0247
symbol: AFM10907.1
gene_biotype: protein_coding
description:
  acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Turpa_0248
symbol: AFM10908.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: hoh:Hoch_5091 pyridine nucleotide-disulphide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Pyridine nucleotide-disulphide oxidoreductase dimerization region.


ensembl_gene_id: Turpa_0251
symbol: AFM10911.1
gene_biotype: protein_coding
description:
  PFAM: CBS domain; Transporter associated domain; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR005170; KEGG: dma:DMR_26080 magnesium and cobalt efflux protein CorC; PFAM: Cystathionine beta-synthase, core; Transporter-associated region; SPTR: Magnesium and cobalt efflux protein CorC.


ensembl_gene_id: Turpa_0252
symbol: ybeY
gene_biotype: protein_coding
description:
  Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Turpa_0253
symbol: AFM10913.1
gene_biotype: protein_coding
description:
  PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: lic:LIC10570 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-Sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Turpa_0255
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: Turpa_0256
symbol: AFM10916.1
gene_biotype: protein_coding
description:
  PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR006371:IPR000537; KEGG: tye:THEYE_A1214 4-hydroxybenzoate polyprenyltransferase, putative; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase, putative; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related.


ensembl_gene_id: Turpa_0257
symbol: AFM10917.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: lil:LA_0056 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein.


ensembl_gene_id: Turpa_0258
symbol: AFM10918.1
gene_biotype: protein_coding
description:
  PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: cpi:Cpin_6960 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; SPTR: Deoxyribodipyrimidine photolyase.


ensembl_gene_id: Turpa_0259
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: Turpa_0261
symbol: purT
gene_biotype: protein_coding
description:
  Formate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: Turpa_0262
symbol: AFM10922.1
gene_biotype: protein_coding
description:
  Aspartate kinase; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR005260:IPR001341:IPR001048:IPR002912; KEGG: lic:LIC12909 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.


ensembl_gene_id: Turpa_0265
symbol: AFM10925.1
gene_biotype: protein_coding
description:
  Flagellin domain protein; Component of the core of the flagella. Belongs to the bacterial flagellin family.


ensembl_gene_id: Turpa_0267
symbol: AFM10927.1
gene_biotype: protein_coding
description:
  PFAM: HlyD family secretion protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR006143; KEGG: lbf:LBF_0197 efflux pump; PFAM: Secretion protein HlyD; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0268
symbol: AFM10928.1
gene_biotype: protein_coding
description:
  TolC-like outermembrane protein; PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: lbf:LBF_0196 TolC-like outermembrane protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0270
symbol: AFM10930.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; PFAM: tRNA (Uracil-5-)-methyltransferase; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280; KEGG: ppd:Ppro_1783 RNA methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: Turpa_0271
symbol: AFM10931.1
gene_biotype: protein_coding
description:
  COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; InterPro IPR000073; KEGG: nit:NAL212_1825 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0272
symbol: AFM10932.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF465); KEGG: meh:M301_0609 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0273
symbol: AFM10933.1
gene_biotype: protein_coding
description:
  TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; InterPro IPR011138; KEGG: mtt:Ftrac_3249 succinate dehydrogenase subunit C; SPTR: Succinate dehydrogenase subunit C; TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit.


ensembl_gene_id: Turpa_0274
symbol: AFM10934.1
gene_biotype: protein_coding
description:
  PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR011280:IPR003953:IPR004112; KEGG: chu:CHU_2473 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; SPTR: Possible succinate dehydrogenase; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gr [...]


ensembl_gene_id: Turpa_0276
symbol: AFM10936.1
gene_biotype: protein_coding
description:
  PFAM: Neutral/alkaline non-lysosomal ceramidase; InterPro IPR006823; KEGG: lbf:LBF_2410 putative lipoprotein; PFAM: Neutral/alkaline nonlysosomal ceramidase; SPTR: Putative neutral/alkaline ceramidase; putative signal peptide.


ensembl_gene_id: Turpa_0277
symbol: AFM10937.1
gene_biotype: protein_coding
description:
  COGs: COG3531 protein-disulfide isomerase; KEGG: chu:CHU_3640 protein-disulfide isomerase; SPTR: Protein-disulfide isomerase.


ensembl_gene_id: Turpa_0278
symbol: AFM10938.1
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class II (D, K and N); COGs: COG2269 Truncated possibly inactive lysyl-tRNA synthetase (class II); InterPro IPR004364; KEGG: aci:ACIAD2666 putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA); PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); SPTR: Uncharacterized protein YjeA.


ensembl_gene_id: Turpa_0279
symbol: AFM10939.1
gene_biotype: protein_coding
description:
  PFAM: Stage II sporulation protein E (SpoIIE); InterPro IPR001932:IPR010822; KEGG: lbf:LBF_1997 serine phosphatase RsbU; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0280
symbol: AFM10940.1
gene_biotype: protein_coding
description:
  PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098:IPR006159:IPR006099:IPR006158; KEGG: lbl:LBL_4062 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; SPTR: Methylmalonyl-CoA mutase; TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal.


ensembl_gene_id: Turpa_0281
symbol: AFM10941.1
gene_biotype: protein_coding
description:
  PFAM: Dienelactone hydrolase family; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: aci:ACIAD2677 putative dienelactone hydrolase; PFAM: Dienelactone hydrolase; SPTR: Predicted protein.


ensembl_gene_id: Turpa_0282
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Turpa_0284
symbol: AFM10944.1
gene_biotype: protein_coding
description:
  PFAM: PHB/PHA accumulation regulator DNA-binding domain; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; COGs: COG5394 conserved hypothetical protein; InterPro IPR012909; KEGG: lbj:LBJ_2512 hypothetical protein; PFAM: PHA accumulation regulator DNA-binding, N-terminal; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0286
symbol: rpmI
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; HAMAP: Ribosomal protein L35; InterPro IPR001706; KEGG: shg:Sph21_2965 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Turpa_0287
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Turpa_0288
symbol: AFM10948.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: btl:BALH_4078 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR.


ensembl_gene_id: Turpa_0289
symbol: AFM10949.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: vco:VC0395_A2132 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC-type antimicrobial peptide transport system permease component.


ensembl_gene_id: Turpa_0290
symbol: AFM10950.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: gau:GAU_0631 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ABC transporter ATP-binding protein.


ensembl_gene_id: Turpa_0291
symbol: AFM10951.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF3299); COGs: COG3495 conserved hypothetical protein; KEGG: gau:GAU_0630 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0295
symbol: AFM10955.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid desaturase; InterPro IPR005804; KEGG: lbl:LBL_2812 fatty acid desaturase related protein; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase related protein.


ensembl_gene_id: Turpa_0296
symbol: AFM10956.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Predicted metal-dependent hydrolase; COGs: COG3687 metal-dependent hydrolase; InterPro IPR016516; KEGG: mxa:MXAN_2348 hypothetical protein; PFAM: Uncharacterised conserved protein UCP07580; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0297
symbol: AFM10957.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: sfu:Sfum_1371 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Butyryl-CoA dehydrogenase.


ensembl_gene_id: Turpa_0300
symbol: AFM10960.1
gene_biotype: protein_coding
description:
  PFAM: NAD dependent epimerase/dehydratase family; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509; KEGG: dfe:Dfer_4399 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.


ensembl_gene_id: Turpa_0301
symbol: AFM10961.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dma:DMR_03000 putative polyprenol-phosphate mannosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative polyprenol-phosphate mannosyltransferase.


ensembl_gene_id: Turpa_0302
symbol: AFM10962.1
gene_biotype: protein_coding
description:
  PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: tye:THEYE_A0474 CDP-tyvelose epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: CDP-tyvelose epimerase.


ensembl_gene_id: Turpa_0303
symbol: AFM10963.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dfe:Dfer_1485 putative transmembrane protein; SPTR: Putative transmembrane protein.


ensembl_gene_id: Turpa_0304
symbol: AFM10964.1
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: sat:SYN_00532 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SPTR: Nucleotide [...]


ensembl_gene_id: Turpa_0306
symbol: AFM10966.1
gene_biotype: protein_coding
description:
  PFAM: Transcription termination factor nusG; KOW motif; COGs: COG0250 Transcription antiterminator; InterPro IPR005824:IPR006645; KEGG: lbf:LBF_3294 transcription antiterminator; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: KOW; SPTR: Putative transcription antitermination protein nusG.


ensembl_gene_id: Turpa_0307
symbol: AFM10967.1
gene_biotype: protein_coding
description:
  Regulatory protein MarR; PFAM: MarR family; TIGRFAM: EPS-associated transcriptional regulator, MarR family; InterPro IPR000835; KEGG: lic:LIC12206 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator (MarR family).


ensembl_gene_id: Turpa_0308
symbol: AFM10968.1
gene_biotype: protein_coding
description:
  PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: tth:TTC0285 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: Turpa_0309
symbol: AFM10969.1
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: cvi:CV_4129 udpglucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal;  [...]


ensembl_gene_id: Turpa_0310
symbol: AFM10970.1
gene_biotype: protein_coding
description:
  Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: cvi:CV_4127 dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Probable dehydrogenase.


ensembl_gene_id: Turpa_0311
symbol: AFM10971.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: aav:Aave_0951 hexapaptide repeat-containing transferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR: Transferase hexapeptide repeat containing protein.


ensembl_gene_id: Turpa_0312
symbol: AFM10972.1
gene_biotype: protein_coding
description:
  PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: mmw:Mmwyl1_0824 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Turpa_0313
symbol: AFM10973.1
gene_biotype: protein_coding
description:
  PFAM: ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: sat:SYN_02655 polysaccharide/polyol phosphate export systems, permease; PFAM: ABC-2 type transporter; SPTR: ABC-type polysaccharide/polyol phosphate export systems, permease component.


ensembl_gene_id: Turpa_0314
symbol: AFM10974.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mhu:Mhun_3088 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.


ensembl_gene_id: Turpa_0315
symbol: AFM10975.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; KEGG: aav:Aave_0960 glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1.


ensembl_gene_id: Turpa_0317
symbol: AFM10977.1
gene_biotype: protein_coding
description:
  PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426:IPR000583:IPR001962; KEGG: bbr:BB0136 putative asparagine synthetase; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; SPTR: Putative uncharacterized protein; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing.


ensembl_gene_id: Turpa_0318
symbol: AFM10978.1
gene_biotype: protein_coding
description:
  PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: lhk:LHK_02801 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0319
symbol: AFM10979.1
gene_biotype: protein_coding
description:
  PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: lhk:LHK_02799 WbmF; PFAM: NAD-dependent epimerase/dehydratase; SPTR: WbmF.


ensembl_gene_id: Turpa_0323
symbol: AFM10983.1
gene_biotype: protein_coding
description:
  Acetyl / acyl transferase related protein; PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR001451; KEGG: pfu:PF0768 acetyl / acyl transferase related protein; SPTR: Acetyl / acyl transferase related protein.


ensembl_gene_id: Turpa_0324
symbol: AFM10984.1
gene_biotype: protein_coding
description:
  PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426:IPR000583:IPR001962; KEGG: dba:Dbac_3261 asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; SPTR: Asparagine synthase (Glutamine-hydrolyzing); TIGRFAM: Asparagine synthase, glutamine-hydrolyzing.


ensembl_gene_id: Turpa_0327
symbol: AFM10987.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Putative F0F1-ATPase subunit (ATPase_gene1); KEGG: brm:Bmur_1943 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0328
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: Turpa_0330
symbol: vapC-2
gene_biotype: protein_coding
description:
  PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: Turpa_0331
symbol: AFM10991.1
gene_biotype: protein_coding
description:
  Integrase catalytic region; PFAM: Integrase core domain; COGs: COG2826 Transposase and inactivated derivatives IS30 family; InterPro IPR001584; KEGG: geb:GM18_0507 integrase catalytic subunit; PFAM: Integrase, catalytic core; SPTR: Integrase catalytic region.


ensembl_gene_id: Turpa_0332
symbol: AFM10992.1
gene_biotype: protein_coding
description:
  Histidine kinase HAMP region domain protein; PFAM: HAMP domain; InterPro IPR003660; KEGG: dal:Dalk_0432 methyl-accepting chemotaxis sensory transducer; PFAM: HAMP linker domain; SMART: HAMP linker domain; SPTR: Putative methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Turpa_0333
symbol: AFM10993.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Methyltransferase domain; KEGG: lic:LIC11497 methyltransferase; SPTR: Methyltransferase; manually curated.


ensembl_gene_id: Turpa_0334
symbol: AFM10994.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: tgr:Tgr7_1387 major facilitator superfamily transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family protein.


ensembl_gene_id: Turpa_0337
symbol: AFM10997.1
gene_biotype: protein_coding
description:
  Sulphatase-modifying factor protein; PFAM: Formylglycine-generating sulfatase enzyme; InterPro IPR005532; KEGG: lbj:LBJ_0108 lipoprotein; PFAM: Sulphatase-modifying factor; SPTR: Hypothetical lipoprotein.


ensembl_gene_id: Turpa_0338
symbol: AFM10998.1
gene_biotype: protein_coding
description:
  PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: lic:LIC10092 metallo-beta-lactamase; SPTR: Metallo-beta-lactamase.


ensembl_gene_id: Turpa_0343
symbol: AFM11003.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF692); Uncharacterized protein conserved in bacteria (DUF2063); COGs: COG3220 conserved hypothetical protein; InterPro IPR007801; KEGG: pfs:PFLU6099 hypothetical protein; PFAM: Protein of unknown function DUF692; SPTR: UPF0276 protein PFLU_6099; manually curated.


ensembl_gene_id: Turpa_0344
symbol: AFM11004.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02943 family; RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: mep:MPQ_1797 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70.


ensembl_gene_id: Turpa_0348
symbol: AFM11007.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel His kinase sensor domain; Universal stress protein family; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003661:IPR003594:IPR003852:IPR006016; KEGG: min:Minf_0758 osmosensitive K+ channel histidine kinase KdpD; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-bindi [...]


ensembl_gene_id: Turpa_0350
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: Turpa_0353
symbol: hisS
gene_biotype: protein_coding
description:
  PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: lil:LA_0054 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup.


ensembl_gene_id: Turpa_0354
symbol: AFM11010.1
gene_biotype: protein_coding
description:
  PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR002225; KEGG: cak:Caul_3985 NAD-dependent epimerase/dehydratase; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase.


ensembl_gene_id: Turpa_0355
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Turpa_0360
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: Turpa_0361
symbol: AFM11017.1
gene_biotype: protein_coding
description:
  PFAM: Sulfatase; COGs: COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily; InterPro IPR000917; KEGG: bba:Bd2884 putative sulfatase; PFAM: Sulfatase; SPTR: Putative sulfatase.


ensembl_gene_id: Turpa_0369
symbol: AFM11025.1
gene_biotype: protein_coding
description:
  Excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: glo:Glov_3514 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein.


ensembl_gene_id: Turpa_0370
symbol: AFM11026.1
gene_biotype: protein_coding
description:
  Lipase; COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; KEGG: lbf:LBF_0752 lipase; SPTR: Putative triglyceride lipase; putative signal peptide.


ensembl_gene_id: Turpa_0371
symbol: AFM11027.1
gene_biotype: protein_coding
description:
  Excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: Excinuclease ABC C subunit domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein.


ensembl_gene_id: Turpa_0373
symbol: AFM11029.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: bba:Bd1768 ABC transporter permease protein; PFAM: Protein of unknown function DUF140; SPTR: ABC transporter permease protein.


ensembl_gene_id: Turpa_0374
symbol: AFM11030.1
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; KEGG: nhl:Nhal_2919 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein.


ensembl_gene_id: Turpa_0375
symbol: AFM11031.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: sur:STAUR_2347 serine O-acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR: Serine O-acetyltransferase.


ensembl_gene_id: Turpa_0377
symbol: AFM11033.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: lbl:LBL_1749 glycosyltransferase; PFAM: Glycosyl transferase WecB/TagA/CpsF; SPTR: Glycosyltransferase; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: Turpa_0378
symbol: AFM11034.1
gene_biotype: protein_coding
description:
  PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760; KEGG: aac:Aaci_2288 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol-phosphate phosphatase.


ensembl_gene_id: Turpa_0379
symbol: AFM11035.1
gene_biotype: protein_coding
description:
  PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: afw:Anae109_1890 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; SPTR: FAD linked oxidase domain protein.


ensembl_gene_id: Turpa_0381
symbol: AFM11037.1
gene_biotype: protein_coding
description:
  MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: pla:Plav_3121 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial.


ensembl_gene_id: Turpa_0382
symbol: AFM11038.1
gene_biotype: protein_coding
description:
  PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: cdl:CDR20291_2657 capsular polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Capsular polysaccharide biosynthesis protein.


ensembl_gene_id: Turpa_0383
symbol: AFM11039.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: aba:Acid345_2850 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0384
symbol: AFM11040.1
gene_biotype: protein_coding
description:
  Putative adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: lbf:LBF_1325 adenylate/guanylate cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0385
symbol: AFM11041.1
gene_biotype: protein_coding
description:
  OmpA-family lipoprotein; PFAM: OmpA family; KEGG: lbl:LBL_2925 OmpA-family lipoprotein; SPTR: OmpA-family lipoprotein.


ensembl_gene_id: Turpa_0386
symbol: AFM11042.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: scl:sce4399 alkane 1-monooxygenase; PFAM: Fatty acid desaturase, type 1; SPTR: Alkane 1-monooxygenase.


ensembl_gene_id: Turpa_0387
symbol: AFM11043.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2225; PFAM: Uncharacterized protein conserved in bacteria (DUF2225); COGs: COG1655 conserved hypothetical protein; InterPro IPR018708; KEGG: lbf:LBF_0531 hypothetical protein; PFAM: Protein of unknown function DUF2225; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0388
symbol: AFM11044.1
gene_biotype: protein_coding
description:
  PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337:IPR006379:IPR001830; KEGG: mem:Memar_2216 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; SPTR: Trehalose 6-phosphatase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB.


ensembl_gene_id: Turpa_0389
symbol: AFM11045.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase 15-related protein; PFAM: Glycosyl hydrolases family 15; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: glycoside hydrolase 15-related protein; PFAM: Glycoside hydrolase 15-related; SPTR: Glycoside hydrolase 15-related protein.


ensembl_gene_id: Turpa_0390
symbol: AFM11046.1
gene_biotype: protein_coding
description:
  PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG1291 Flagellar motor component; InterPro IPR002898; KEGG: lbf:LBF_0191 endoflagellar motor protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Chemotaxis MotA protein; putative membrane protein.


ensembl_gene_id: Turpa_0391
symbol: AFM11047.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: lbf:LBF_0192 flagellar motor protein MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Chemotaxis MotB protein.


ensembl_gene_id: Turpa_0394
symbol: AFM11050.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF445); KEGG: lbf:LBF_2767 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0395
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Turpa_0396
symbol: AFM11052.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: syf:Synpcc7942_0682 hypothetical protein; PFAM: Glycosyl transferase, family 9; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0397
symbol: AFM11053.1
gene_biotype: protein_coding
description:
  PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; COGs: COG1972 Nucleoside permease; InterPro IPR002668:IPR011642:IPR011657; KEGG: sus:Acid_5232 Na+ dependent nucleoside transporter; PFAM: Na dependent nucleoside transporter, C-terminal; Nucleoside recognition; Na dependent nucleoside transporter; SPTR: Na+ dependent nucleoside transporter domain protein.


ensembl_gene_id: Turpa_0399
symbol: AFM11055.1
gene_biotype: protein_coding
description:
  PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type; COGs: COG0538 Isocitrate dehydrogenase; InterPro IPR004439:IPR001804; KEGG: bbe:BBR47_13900 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic.


ensembl_gene_id: Turpa_0400
symbol: AFM11056.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: pfl:PFL_3018 enoyl-CoA hydratase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase.


ensembl_gene_id: Turpa_0402
symbol: AFM11058.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: scl:sce1166 acyl-coenzyme A dehydrogenase, short/branched chain; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl-Coenzyme A dehydrogenase, short/branched chain.


ensembl_gene_id: Turpa_0408
symbol: AFM11064.1
gene_biotype: protein_coding
description:
  PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: hmo:HM1_1512 acetolactate synthase, small subunit; PFAM: Amino acid-binding ACT; Acetolactate synthase, small subunit, C-terminal; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit.


ensembl_gene_id: Turpa_0410
symbol: AFM11066.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mgm:Mmc1_1094 putative outer membrane adhesin like proteiin; SPTR: Putative outer membrane adhesin like proteiin.


ensembl_gene_id: Turpa_0411
symbol: AFM11067.1
gene_biotype: protein_coding
description:
  PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: lbf:LBF_1714 ammonia permease; PFAM: Ammonium transporter; SPTR: Putative permease; putative ammonium transporter; putative membrane protein; putative signal peptide; TIGRFAM: Ammonium transporter; TC 1.A.11.


ensembl_gene_id: Turpa_0412
symbol: AFM11068.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; GGDEF domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000014:IPR000160:IPR001610:IPR001633:IPR007895:IPR0136 55:IPR013767; KEGG: pca:Pcar_2558 signal transduction protein; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; MASE1; PAS fold-3; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted;  [...]


ensembl_gene_id: Turpa_0413
symbol: AFM11069.1
gene_biotype: protein_coding
description:
  PFAM: Cytochrome P450; COGs: COG2124 Cytochrome P450; InterPro IPR001128; KEGG: chl:Chy400_2824 cytochrome P450; PFAM: Cytochrome P450; SPTR: Cytochrome P450.


ensembl_gene_id: Turpa_0414
symbol: AFM11070.1
gene_biotype: protein_coding
description:
  PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: lil:LA_3149 TonB-dependent outer membrane hemin receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent outer membrane hemin receptor.


ensembl_gene_id: Turpa_0416
symbol: AFM11072.1
gene_biotype: protein_coding
description:
  PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0418
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: Turpa_0419
symbol: AFM11075.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: lbf:LBF_0327 enoyl-CoA hydratase/carnithine racemase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/carnithine racemase.


ensembl_gene_id: Turpa_0420
symbol: AFM11076.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: afw:Anae109_3837 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: Turpa_0421
symbol: AFM11077.1
gene_biotype: protein_coding
description:
  PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175; KEGG: tle:Tlet_0269 putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Putative endoribonuclease L-PSP; TIGRFAM: YjgF-like protein.


ensembl_gene_id: Turpa_0424
symbol: AFM11080.1
gene_biotype: protein_coding
description:
  Protein serine/threonine phosphatase with GAF(s) sensor(s); PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003018:IPR001932:IPR010822; KEGG: aba:Acid345_3068 serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; SMART: Protein phosphatase 2C-related; GAF; SPTR: Serine phosphatase.


ensembl_gene_id: Turpa_0428
symbol: AFM11084.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; COGs: COG1217 membrane GTPase involved in stress response; InterPro IPR005225:IPR006298:IPR000795:IPR004161:IPR000640; KEGG: lic:LIC12357 elongation factor EF-G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor EF-G; TIGRFAM: GTP-binding protein TypA; Small GT [...]


ensembl_gene_id: Turpa_0429
symbol: AFM11085.1
gene_biotype: protein_coding
description:
  PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_0318 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel.


ensembl_gene_id: Turpa_0430
symbol: AFM11086.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bhl:Bache_0654 histidine kinase; SPTR: Predicted periplasmic ligand-binding sensor domain.


ensembl_gene_id: Turpa_0433
symbol: AFM11089.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: lbl:LBL_2700 cAMP-binding protein, regulatory protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: cAMP-binding protein, regulatory protein.


ensembl_gene_id: Turpa_0434
symbol: AFM11090.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR019734; KEGG: lbf:LBF_1109 cAMP-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Tetratricopeptide repeat; SPTR: Putative cAMP binding protein.


ensembl_gene_id: Turpa_0435
symbol: AFM11091.1
gene_biotype: protein_coding
description:
  PFAM: Amidohydrolase family; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: lic:LIC10270 chlorohydrolase family protein; PFAM: Amidohydrolase 1; SPTR: Metal-dependent hydrolase.


ensembl_gene_id: Turpa_0436
symbol: AFM11092.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: nmi:NMO_1173 hypothetical protein; PFAM: Peptidase M23; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0437
symbol: AFM11093.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: lbf:LBF_1377 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0438
symbol: AFM11094.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M23; LysM domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR002482:IPR018392:IPR016047; KEGG: lbf:LBF_1376 metalloendopeptidase; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: M23 family metalloendopeptidase.


ensembl_gene_id: Turpa_0439
symbol: AFM11095.1
gene_biotype: protein_coding
description:
  PFAM: NeuB family; COGs: COG2089 Sialic acid synthase; InterPro IPR013132; KEGG: lbf:LBF_0845 N-acetyl neuraminic (sialic) acid synthetase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SPTR: Putative N-acylneuraminate-9-phosphate synthase.


ensembl_gene_id: Turpa_0440
symbol: AFM11096.1
gene_biotype: protein_coding
description:
  Phosphotransferase system, phosphocarrier protein HPr; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698; KEGG: phosphotransferase system, phosphocarrier protein HPr; PFAM: Phosphotransferase system, phosphocarrier HPr protein; SPTR: Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein.


ensembl_gene_id: Turpa_0441
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: Turpa_0442
symbol: AFM11098.1
gene_biotype: protein_coding
description:
  PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: adg:Adeg_0464 sigma 54 modulation protein/ribosomal protein S30EA; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein.


ensembl_gene_id: Turpa_0443
symbol: AFM11099.1
gene_biotype: protein_coding
description:
  Protein serine/threonine phosphatase with GAF(s) sensor(s); PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003018:IPR001932:IPR010822; KEGG: lbf:LBF_1715 serine phosphatase RsbU; PFAM: Sporulation stage II, protein E C-terminal; GAF; SMART: Protein phosphatase 2C-related; GAF; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0444
symbol: AFM11100.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF962); COGs: COG4323 membrane protein; InterPro IPR018722; KEGG: lbl:LBL_0658 hypothetical protein; PFAM: Protein of unknown function DUF2253, membrane; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0445
symbol: AFM11101.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dps:DP0444 DctP (periplasmic C4-dicarboxylate binding protein); PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Putative ABC transporter periplasmic solute-binding protein.


ensembl_gene_id: Turpa_0446
symbol: AFM11102.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain; GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000160:IPR001638:IPR001633; KEGG: aoe:Clos_1949 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Extracellul [...]


ensembl_gene_id: Turpa_0448
symbol: AFM11104.1
gene_biotype: protein_coding
description:
  PFAM: CheB methylesterase; COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR000673; KEGG: tmz:Tmz1t_1322 response regulator receiver modulated CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; SPTR: Chemotaxis response regulator protein-glutamate methylesterase CheB.


ensembl_gene_id: Turpa_0449
symbol: cheD
gene_biotype: protein_coding
description:
  CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Turpa_0450
symbol: AFM11106.1
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: gpb:HDN1F_13590 methylase of chemotaxis methyl-accepting protein; PFAM: MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type; SPTR: Methylase of chemotaxis methyl-accepting protein.


ensembl_gene_id: Turpa_0452
symbol: AFM11108.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: noc:Noc_2839 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; Belongs to the LOG family.


ensembl_gene_id: Turpa_0455
symbol: AFM11111.1
gene_biotype: protein_coding
description:
  Fmu (Sun) domain protein; PFAM: NOL1/NOP2/sun family; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: gpb:HDN1F_21870 hypothetical protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Putative uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: Turpa_0457
symbol: AFM11113.1
gene_biotype: protein_coding
description:
  Protein serine/threonine phosphatase with extracellular sensor; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003660:IPR001932:IPR010822; KEGG: swo:Swol_2060 serine phosphatase RsbU regulator of sigma subunit-like protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: Protein phosphatase 2C-related; HAMP linker domain; SPTR: Serine phosphatase.


ensembl_gene_id: Turpa_0459
symbol: AFM11115.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial SH3 domain; InterPro IPR013247; KEGG: lbf:LBF_2721 hypothetical protein; PFAM: SH3, type 3; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0460
symbol: cmoA
gene_biotype: protein_coding
description:
  tRNA (cmo5U34)-methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM); Belongs to the class I-like SAM-binding methyltransferase superfamily. Cx-SAM synthase family.


ensembl_gene_id: Turpa_0461
symbol: AFM11117.1
gene_biotype: protein_coding
description:
  Methyltransferase; PFAM: Protein of unknown function (DUF1698); InterPro IPR010017; KEGG: dpr:Despr_2628 methyltransferase; PFAM: tRNA (mo5U34)-methyltransferase; SPTR: Methyltransferase.


ensembl_gene_id: Turpa_0463
symbol: rpsB
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865; KEGG: lbf:LBF_2537 30S ribosomal protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: Turpa_0464
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Turpa_0466
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Turpa_0467
symbol: AFM11123.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: Turpa_0468
symbol: AFM11124.1
gene_biotype: protein_coding
description:
  Adenylate/guanylate cyclase with GAF sensor(s); PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain; Heme NO binding associated; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR003018:IPR001054; KEGG: lbf:LBF_2448 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; SPTR: Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.


ensembl_gene_id: Turpa_0469
symbol: AFM11125.1
gene_biotype: protein_coding
description:
  PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: ttj:TTHA1164 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.


ensembl_gene_id: Turpa_0471
symbol: AFM11127.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF454); COGs: COG2832 conserved hypothetical protein; InterPro IPR007401; KEGG: lic:LIC10304 hypothetical protein; PFAM: Protein of unknown function DUF454; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0472
symbol: AFM11128.1
gene_biotype: protein_coding
description:
  PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: rxy:Rxyl_2671 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist.


ensembl_gene_id: Turpa_0473
symbol: AFM11129.1
gene_biotype: protein_coding
description:
  PFAM: PGAP1-like protein; InterPro IPR012908; KEGG: scl:sce8975 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0475
symbol: AFM11131.1
gene_biotype: protein_coding
description:
  Lipase class 2; PFAM: Alpha/beta hydrolase of unknown function (DUF915); COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; KEGG: hoh:Hoch_4226 lipase class 2; SPTR: Lipase class 2.


ensembl_gene_id: Turpa_0477
symbol: AFM11133.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: lbl:LBL_2312 receiver component of a two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SPTR: Receiver component of a t [...]


ensembl_gene_id: Turpa_0478
symbol: AFM11134.1
gene_biotype: protein_coding
description:
  COGs: COG4585 Signal transduction histidine kinase; KEGG: swi:Swit_0803 putative signal transduction histidine kinase; SPTR: Putative signal transduction histidine kinase.


ensembl_gene_id: Turpa_0480
symbol: AFM11136.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1566); InterPro IPR011460; KEGG: lil:LA_0858 hypothetical protein; PFAM: Protein of unknown function DUF1566; SPTR: Putative lipoprotein.


ensembl_gene_id: Turpa_0481
symbol: AFM11137.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1566); InterPro IPR011460; KEGG: lic:LIC10497 hypothetical protein; PFAM: Protein of unknown function DUF1566; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0484
symbol: AFM11140.1
gene_biotype: protein_coding
description:
  KEGG: llo:LLO_3002 transmembrane protein (fibronectin III domain and GP5 C-terminal repeat); SPTR: Putative transmembrane protein (Fibronectin III domain and Gp5 C-terminal repeat).


ensembl_gene_id: Turpa_0493
symbol: AFM11147.1
gene_biotype: protein_coding
description:
  PFAM: Flagellar biosynthesis protein, FliO; KEGG: lbl:LBL_1847 endoflagellar biogenesis protein; SPTR: Endoflagellar biogenesis protein.


ensembl_gene_id: Turpa_0494
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Turpa_0495
symbol: AFM11149.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR010822:IPR001440; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; Tetratricopeptide TPR-1; SMART: HAMP linker domain; SPTR: Putative histidine kinase sensor protein; putative membrane protein.


ensembl_gene_id: Turpa_0496
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: Turpa_0497
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Turpa_0498
symbol: AFM11152.1
gene_biotype: protein_coding
description:
  PFAM: Cupin domain; InterPro IPR013096; KEGG: brm:Bmur_2233 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein.


ensembl_gene_id: Turpa_0499
symbol: AFM11153.1
gene_biotype: protein_coding
description:
  InterPro IPR019734:IPR011717:IPR013105; KEGG: mfs:MFS40622_0783 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; SPTR: TPR repeat-containing protein.


ensembl_gene_id: Turpa_0500
symbol: AFM11154.1
gene_biotype: protein_coding
description:
  Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: cnb:CNBA2610 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Cytoplasm protein, putative.


ensembl_gene_id: Turpa_0502
symbol: AFM11156.1
gene_biotype: protein_coding
description:
  Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR003658:IPR002645; KEGG: mca:MCA1431 anti-anti-sigma factor family protein; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Turpa_0503
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.


ensembl_gene_id: Turpa_0504
symbol: AFM11158.1
gene_biotype: protein_coding
description:
  PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: pseudouridine synthase, RluA family; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase, RluA family; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Turpa_0505
symbol: AFM11159.1
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR002317:IPR015866:IPR002314; KEGG: lbf:LBF_3352 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa.


ensembl_gene_id: Turpa_0509
symbol: AFM11163.1
gene_biotype: protein_coding
description:
  SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: npu:Npun_R2870 allergen V5/TPX-1 family protein; PFAM: SCP-like extracellular; SPTR: Allergen V5/Tpx-1 family protein.


ensembl_gene_id: Turpa_0510
symbol: AFM11164.1
gene_biotype: protein_coding
description:
  PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+)); PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Turpa_0512
symbol: carA
gene_biotype: protein_coding
description:
  PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR006274:IPR002474:IPR000991; KEGG: naz:Aazo_2282 carbamoyl-phosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; SPTR: Carbamoyl-phosphate synthase small chain; TIGRFAM: Carbamoyl phosphate synthase, small subunit; Belongs to the CarA family.


ensembl_gene_id: Turpa_0513
symbol: AFM11167.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; PFAM: EAL domain; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: lic:LIC20198 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0515
symbol: AFM11169.1
gene_biotype: protein_coding
description:
  PFAM: HDOD domain; COGs: COG1639 signal transduction protein; InterPro IPR013976; KEGG: geb:GM18_4246 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SPTR: Metal dependent phosphohydrolase.


ensembl_gene_id: Turpa_0516
symbol: AFM11170.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF218; PFAM: DUF218 domain; COGs: COG2949 Uncharacterized membrane protein; InterPro IPR003848; KEGG: tjr:TherJR_1014 protein of unknown function DUF218; PFAM: Protein of unknown function DUF218; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0518
symbol: AFM11172.1
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sfu:Sfum_1413 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Turpa_0519
symbol: AFM11173.1
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sfu:Sfum_1414 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Turpa_0521
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Turpa_0522
symbol: AFM11176.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; InterPro IPR013216; KEGG: lbf:LBF_2309 methyltransferase/methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.


ensembl_gene_id: Turpa_0523
symbol: AFM11177.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: pap:PSPA7_0916 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase.


ensembl_gene_id: Turpa_0524
symbol: AFM11178.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: bch:Bcen2424_5974 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein, TetR family.


ensembl_gene_id: Turpa_0526
symbol: AFM11180.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial protein of unknown function (DUF939); COGs: COG4129 membrane protein; KEGG: membrane protein; SPTR: Membrane protein.


ensembl_gene_id: Turpa_0529
symbol: AFM11183.1
gene_biotype: protein_coding
description:
  COGs: COG4339 conserved hypothetical protein; KEGG: msv:Mesil_2551 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0532
symbol: AFM11186.1
gene_biotype: protein_coding
description:
  COGs: COG3440 restriction endonuclease; KEGG: har:HEAR0008 putative restriction endonuclease; SPTR: Putative restriction endonuclease; manually curated.


ensembl_gene_id: Turpa_0533
symbol: AFM11187.1
gene_biotype: protein_coding
description:
  DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: swp:swp_0839 site-specific DNA-methyltransferase; PFAM: DNA methylase, C-5 cytosine-specific; SPTR: Modification methylase SinI; TIGRFAM: DNA methylase, C-5 cytosine-specific.


ensembl_gene_id: Turpa_0534
symbol: AFM11188.1
gene_biotype: protein_coding
description:
  Restriction endonuclease, type II, SinI; PFAM: SinI restriction endonuclease; InterPro IPR019070; KEGG: fsu:Fisuc_0932 hypothetical protein; PFAM: Restriction endonuclease, type II, SinI; SPTR: Type II restriction enzyme.


ensembl_gene_id: Turpa_0538
symbol: AFM11192.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1272); COGs: COG3813 conserved hypothetical protein; InterPro IPR010696; KEGG: nde:NIDE1073 hypothetical protein; PFAM: Protein of unknown function DUF1272; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0539
symbol: AFM11193.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2191; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); InterPro IPR019239; KEGG: nwa:Nwat_2690 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0542
symbol: AFM11196.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sti:Sthe_3164 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70.


ensembl_gene_id: Turpa_0544
symbol: AFM11198.1
gene_biotype: protein_coding
description:
  PFAM: Redoxin; InterPro IPR000866; KEGG: cps:CPS_2557 putative heme-binding protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative heme-binding protein.


ensembl_gene_id: Turpa_0545
symbol: AFM11199.1
gene_biotype: protein_coding
description:
  Methyltransferase type 12; PFAM: Spermine/spermidine synthase; COGs: COG0421 Spermidine synthase; InterPro IPR013217; KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase); PFAM: Methyltransferase type 12; SPTR: Spermidine synthase (Putrescine aminopropyltransferase).


ensembl_gene_id: Turpa_0550
symbol: AFM11203.1
gene_biotype: protein_coding
description:
  Methyltransferase type 12; InterPro IPR000182:IPR013217; KEGG: cat:CA2559_08556 methyltransferase, putative; PFAM: Methyltransferase type 12; GCN5-related N-acetyltransferase; SPTR: Methyltransferase, putative.


ensembl_gene_id: Turpa_0556
symbol: AFM11208.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF932); InterPro IPR009276; KEGG: nwa:Nwat_3150 hypothetical protein; PFAM: Protein of unknown function DUF932; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0559
symbol: AFM11211.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ppm:PPSC2_c5110 von willebrand factor, type A; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0562
symbol: AFM11214.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF262; InterPro IPR004919; KEGG: nwa:Nwat_2449 hypothetical protein; PFAM: Protein of unknown function DUF262; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0564
symbol: AFM11216.1
gene_biotype: protein_coding
description:
  PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: Similar to type I restriction modification enzyme M chain.


ensembl_gene_id: Turpa_0566
symbol: AFM11218.1
gene_biotype: protein_coding
description:
  PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: ftn:FTN_1154 type I restriction-modification system, subunit S; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Type I restriction-modification system, subunit S.


ensembl_gene_id: Turpa_0569
symbol: AFM11221.1
gene_biotype: protein_coding
description:
  Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: mma:MM_2606 hypothetical protein; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0570
symbol: AFM11222.1
gene_biotype: protein_coding
description:
  PFAM: EcoEI R protein C-terminal; Type III restriction enzyme, res subunit; COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001:IPR007409:IPR006935:IPR013670; KEGG: Type I site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SMART: DEAD-like helicase, N-terminal; SPTR: Type I restrictio [...]


ensembl_gene_id: Turpa_0575
symbol: AFM11227.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR011659; KEGG: rmr:Rmar_1730 WD40 domain-containing protein beta propeller; SPTR: WD40 domain protein beta Propeller.


ensembl_gene_id: Turpa_0576
symbol: AFM11228.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: mpt:Mpe_A1621 tetracycline-efflux transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Tetracycline-efflux transporter.


ensembl_gene_id: Turpa_0577
symbol: AFM11229.1
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR019734; KEGG: lbf:LBF_2862 TPR repeat-containing protein; SPTR: Putative TPR-repeats-containing protein.


ensembl_gene_id: Turpa_0580
symbol: AFM11232.1
gene_biotype: protein_coding
description:
  PFAM: Glycerophosphoryl diester phosphodiesterase family; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: lic:LIC10293 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase.


ensembl_gene_id: Turpa_0581
symbol: AFM11233.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR011816:IPR001264:IPR001460; KEGG: lbf:LBF_0978 membrane carboxypeptidase/penicillin-binding protein 1; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: Putative penicillin-binding protein 1A; TIGRFAM: Penicillin-binding protein 1A.


ensembl_gene_id: Turpa_0582
symbol: AFM11234.1
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: Turpa_0583
symbol: AFM11235.1
gene_biotype: protein_coding
description:
  Prevent-host-death family protein; PFAM: Phd_YefM; InterPro IPR006442; SPTR: Putative uncharacterized protein; TIGRFAM: Prevent-host-death protein.


ensembl_gene_id: Turpa_0585
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Turpa_0586
symbol: AFM11238.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: bav:BAV0766 membrane-associated phosphoesterase; PFAM: Metallophosphoesterase; SPTR: Putative membrane-associated phosphoesterase.


ensembl_gene_id: Turpa_0587
symbol: AFM11239.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG0824 thioesterase; KEGG: lic:LIC12796 hypothetical protein; SPTR: Predicted thioesterase.


ensembl_gene_id: Turpa_0588
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Turpa_0589
symbol: AFM11241.1
gene_biotype: protein_coding
description:
  COGs: COG0786 Na+/glutamate symporter; InterPro IPR004445; KEGG: rba:RB5043 Na+/glutamate symporter; PFAM: Sodium/glutamate symporter; SPTR: Sodium/glutamate symporter.


ensembl_gene_id: Turpa_0590
symbol: AFM11242.1
gene_biotype: protein_coding
description:
  Membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387:IPR001478:IPR008915; KEGG: lic:LIC10857 integral membrane zinc metalloprotease; PFAM: Peptidase M50; SPTR: Zinc metalloprotease; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase.


ensembl_gene_id: Turpa_0592
symbol: AFM11244.1
gene_biotype: protein_coding
description:
  Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: ssm:Spirs_2127 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein.


ensembl_gene_id: Turpa_0593
symbol: AFM11245.1
gene_biotype: protein_coding
description:
  TIGRFAM: conserved hypothetical protein; InterPro IPR011935; KEGG: geo:Geob_3717 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02231.


ensembl_gene_id: Turpa_0594
symbol: AFM11246.1
gene_biotype: protein_coding
description:
  Von Willebrand factor type A; PFAM: Curli production assembly/transport component CsgG; InterPro IPR002035; KEGG: cpc:Cpar_0214 hypothetical protein; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0596
symbol: AFM11248.1
gene_biotype: protein_coding
description:
  PFAM: Di-haem cytochrome c peroxidase; TIGRFAM: di-heme enzyme, MXAN_0977 family; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: ava:Ava_B0145 di-haem cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: Di-heme cytochrome c peroxidase.


ensembl_gene_id: Turpa_0597
symbol: AFM11249.1
gene_biotype: protein_coding
description:
  Hypothetical protein; TIGRFAM: AZL_007920/MXAN_0976 family protein; KEGG: sur:STAUR_0415 hypothetical protein; SPTR: Lipoprotein.


ensembl_gene_id: Turpa_0600
symbol: AFM11252.1
gene_biotype: protein_coding
description:
  PFAM: Transglutaminase-like superfamily; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: pmy:Pmen_1918 transglutaminase-like enzymes putative cysteine protease-like protein; PFAM: Transglutaminase-like; SPTR: Transglutaminase-like enzymes putative cysteine protease-like protein.


ensembl_gene_id: Turpa_0601
symbol: AFM11253.1
gene_biotype: protein_coding
description:
  InterPro IPR000835; KEGG: mca:MCA2812 MarR family transcriptional regulator; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family protein.


ensembl_gene_id: Turpa_0605
symbol: AFM11257.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2091, periplasmic; PFAM: Membrane-bound lysozyme-inhibitor of c-type lysozyme; InterPro IPR018660; KEGG: putative lipoprotein; PFAM: Protein of unknown function DUF2091, periplasmic; SPTR: Membrane-bound lysozyme inhibitor of c-type lysozyme.


ensembl_gene_id: Turpa_0606
symbol: AFM11258.1
gene_biotype: protein_coding
description:
  RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: mpt:Mpe_A3805 RNA-binding region RNP-1; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1; SPTR: RNA-binding region RNP-1.


ensembl_gene_id: Turpa_0607
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: Turpa_0608
symbol: AFM11260.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: mxa:MXAN_6257 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0609
symbol: AFM11261.1
gene_biotype: protein_coding
description:
  Oxidoreductase; TIGRFAM: radical SAM additional 4Fe4S-binding domain; KEGG: lbj:LBJ_0533 oxidoreductase; SPTR: Oxidoreductase.


ensembl_gene_id: Turpa_0610
symbol: AFM11262.1
gene_biotype: protein_coding
description:
  Hypothetical protein; TIGRFAM: putative peptidyl-prolyl cis-trans isomerase, LIC12922 family; KEGG: lic:LIC12922 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0611
symbol: AFM11263.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 51; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264:IPR001460; KEGG: sku:Sulku_2222 penicillin-binding protein, 1a family; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: Penicillin-binding protein, 1A family.


ensembl_gene_id: Turpa_0613
symbol: AFM11265.1
gene_biotype: protein_coding
description:
  COGs: COG4676 conserved hypothetical protein; KEGG: bxe:Bxe_B2571 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0614
symbol: AFM11266.1
gene_biotype: protein_coding
description:
  PFAM: VanW like protein; COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391; KEGG: glo:Glov_1227 VanW family protein; PFAM: VanW; SPTR: VanW family protein.


ensembl_gene_id: Turpa_0615
symbol: AFM11267.1
gene_biotype: protein_coding
description:
  Alpha-2-macroglobulin domain protein 2; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890:IPR011625:IPR019565; KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like; PFAM: Alpha-2-macroglobulin, N-terminal 2; Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, thiol-ester bond-forming; SPTR: Alpha-2-macroglobulin-like protein.


ensembl_gene_id: Turpa_0616
symbol: AFM11268.1
gene_biotype: protein_coding
description:
  AMMECR1 domain protein; PFAM: AMMECR1; InterPro IPR002733; KEGG: glo:Glov_1226 hypothetical protein; PFAM: AMMECR1; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0618
symbol: AFM11270.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M23; Bacterial SH3 domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR013247:IPR016047:IPR003646; KEGG: lbf:LBF_0603 metalloendoprotease; PFAM: Peptidase M23; SH3, type 3; SPTR: Putative metalloendopeptidase, M23B family; putative signal peptide.


ensembl_gene_id: Turpa_0621
symbol: AFM11273.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: lbj:LBJ_0766 receiver component of a two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SPTR: Receiver component of a t [...]


ensembl_gene_id: Turpa_0622
symbol: AFM11274.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: sli:Slin_6208 histidine kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Histidine kinase.


ensembl_gene_id: Turpa_0624
symbol: AFM11276.1
gene_biotype: protein_coding
description:
  23S rRNA Gm-2251 2'-O-methyltransferase; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: ttu:TERTU_0546 23S rRNA-methyltransferase RlmB; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: Putative enzyme; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: Turpa_0625
symbol: cysS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803:IPR015273:IPR002308; KEGG: lic:LIC12028 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Turpa_0626
symbol: AFM11278.1
gene_biotype: protein_coding
description:
  PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; InterPro IPR020602; KEGG: bmq:BMQ_1085 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; SPTR: GTP cyclohydrolase 1 1.


ensembl_gene_id: Turpa_0627
symbol: AFM11279.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COGs: COG2129 phosphoesterase related to the Icc protein; InterPro IPR004843; KEGG: lbl:LBL_2680 phosphoesterase; PFAM: Metallophosphoesterase; SPTR: Phosphoesterase.


ensembl_gene_id: Turpa_0629
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Turpa_0630
symbol: AFM11282.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: syx:SynWH7803_1118 AhpC/TSA family peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; SPTR: Thioredoxin peroxidase.


ensembl_gene_id: Turpa_0632
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Turpa_0635
symbol: AFM11287.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: pol:Bpro_0672 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0636
symbol: AFM11288.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: dap:Dacet_2254 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: AMP-dependent synthetase and ligase.


ensembl_gene_id: Turpa_0637
symbol: AFM11289.1
gene_biotype: protein_coding
description:
  PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR006121:IPR008250:IPR005834:IPR006403:IPR006404:IPR0064 16:IPR001757; KEGG: bbe:BBR47_03740 copper-transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; SPTR: Copper-transporting P-type A [...]


ensembl_gene_id: Turpa_0638
symbol: AFM11290.1
gene_biotype: protein_coding
description:
  PFAM: Heavy-metal-associated domain; InterPro IPR006121; KEGG: gym:GYMC10_0594 copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Copper ion binding protein.


ensembl_gene_id: Turpa_0640
symbol: AFM11292.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: ABC transporter substrate binding protein; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; KEGG: nde:NIDE0544 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0641
symbol: AFM11293.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR010822; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: HAMP linker domain; SPTR: Putative histidine kinase sensor protein; putative membrane protein.


ensembl_gene_id: Turpa_0642
symbol: AFM11294.1
gene_biotype: protein_coding
description:
  PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: cja:CJA_0755 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor, putative.


ensembl_gene_id: Turpa_0644
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Turpa_0645
symbol: AFM11297.1
gene_biotype: protein_coding
description:
  PFAM: Phosphate acetyl/butaryl transferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR002505; KEGG: mel:Metbo_0674 phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase; SPTR: Phosphate butyryltransferase.


ensembl_gene_id: Turpa_0646
symbol: AFM11298.1
gene_biotype: protein_coding
description:
  Na/Pi-cotransporter II-related protein; PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841:IPR004633; KEGG: cbf:CLI_3626 Na/Pi-cotransporter family protein/PhoU family protein; PFAM: Na/Pi-cotransporter; SPTR: Na/Pi-cotransporter family protein/PhoU family protein; TIGRFAM: Na/Pi co-transporter II-related.


ensembl_gene_id: Turpa_0647
symbol: AFM11299.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dal:Dalk_0239 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein.


ensembl_gene_id: Turpa_0648
symbol: AFM11300.1
gene_biotype: protein_coding
description:
  PFAM: DeoC/LacD family aldolase; COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR002915; KEGG: bvu:BVU_1894 fructose-bisphosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Fructose-bisphosphate aldolase class I.


ensembl_gene_id: Turpa_0651
symbol: AFM11303.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: lil:LA_3147 alpha/beta hydrolase superfamily protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase superfamily protein.


ensembl_gene_id: Turpa_0652
symbol: AFM11304.1
gene_biotype: protein_coding
description:
  PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: pst:PSPTO_0686 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain-containing protein; TIGRFAM: Thioredoxin; manually curated.


ensembl_gene_id: Turpa_0653
symbol: AFM11305.1
gene_biotype: protein_coding
description:
  Peptidase M50; PFAM: CBS domain; Peptidase family M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915:IPR000644; KEGG: peptidase M50; PFAM: Peptidase M50; Cystathionine beta-synthase, core; SPTR: Peptidase M50; Belongs to the peptidase M50B family.


ensembl_gene_id: Turpa_0654
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Turpa_0657
symbol: AFM11309.1
gene_biotype: protein_coding
description:
  Fatty acid desaturase; PFAM: Sphingolipid Delta4-desaturase (DES); Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: sli:Slin_4982 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase.


ensembl_gene_id: Turpa_0658
symbol: AFM11310.1
gene_biotype: protein_coding
description:
  PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362:IPR019468:IPR004769; KEGG: lbj:LBJ_0845 adenylosuccinate lyase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Turpa_0659
symbol: AFM11311.1
gene_biotype: protein_coding
description:
  PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: lic:LIC12937 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Turpa_0662
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: Turpa_0663
symbol: AFM11315.1
gene_biotype: protein_coding
description:
  PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; InterPro IPR010743; KEGG: sat:SYN_01259 methyltransferase; PFAM: Methionine biosynthesis MetW; SPTR: Methyltransferase; TIGRFAM: Methionine biosynthesis MetW.


ensembl_gene_id: Turpa_0664
symbol: AFM11316.1
gene_biotype: protein_coding
description:
  PFAM: Alg9-like mannosyltransferase family; InterPro IPR005599; KEGG: Alg9 family protein mannosyltransferase; PFAM: Alg9-like mannosyltransferase; SPTR: Alg9 family protein mannosyltransferase.


ensembl_gene_id: Turpa_0666
symbol: AFM11318.1
gene_biotype: protein_coding
description:
  PFAM: Restriction endonuclease; InterPro IPR001440:IPR007560:IPR019734; KEGG: ssm:Spirs_2364 restriction endonuclease; PFAM: Restriction endonuclease, type IV-like, Mrr; Tetratricopeptide TPR-1; SPTR: Restriction endonuclease.


ensembl_gene_id: Turpa_0669
symbol: AFM11321.1
gene_biotype: protein_coding
description:
  PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: tal:Thal_0065 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Turpa_0671
symbol: AFM11323.1
gene_biotype: protein_coding
description:
  PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: chy:CHY_1292 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxyacyl-CoA dehydrogenase, NAD binding; SPTR: 3-hydroxybutyryl-CoA dehydrogenase.


ensembl_gene_id: Turpa_0673
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Turpa_0675
symbol: AFM11326.1
gene_biotype: protein_coding
description:
  PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: gpb:HDN1F_00160 putative epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative epimerase.


ensembl_gene_id: Turpa_0676
symbol: AFM11327.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: chy:CHY_0845 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: Long-chain-fatty-acid--CoA ligase.


ensembl_gene_id: Turpa_0677
symbol: AFM11328.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate TPP-binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766; KEGG: rfr:Rfer_2478 thiamine pyrophosphate enzyme-like TPP binding protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; SPTR: Thiam [...]


ensembl_gene_id: Turpa_0678
symbol: AFM11329.1
gene_biotype: protein_coding
description:
  PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: HxlR family transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator, MarR family.


ensembl_gene_id: Turpa_0679
symbol: AFM11330.1
gene_biotype: protein_coding
description:
  ThiJ/PfpI domain-containing protein; PFAM: DJ-1/PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818; KEGG: ThiJ/PfpI domain-containing protein; PFAM: ThiJ/PfpI; SPTR: ThiJ/PfpI family protein.


ensembl_gene_id: Turpa_0680
symbol: AFM11331.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function, DUF481; KEGG: sli:Slin_5997 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0681
symbol: AFM11332.1
gene_biotype: protein_coding
description:
  PFAM: NADP oxidoreductase coenzyme F420-dependent; COGs: COG2085 dinucleotide-binding protein; InterPro IPR004455; KEGG: NADP oxidoreductase coenzyme F420-dependent; PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: NADP oxidoreductase coenzyme f420-dependent superfamily.


ensembl_gene_id: Turpa_0682
symbol: AFM11333.1
gene_biotype: protein_coding
description:
  PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: npu:Npun_R2076 activator of HSP90 ATPase 1 family protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0683
symbol: AFM11334.1
gene_biotype: protein_coding
description:
  Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: Flavin-binding monooxygenase-like; COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR003953; KEGG: gpb:HDN1F_36680 putative monooxygenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Putative monooxygenase.


ensembl_gene_id: Turpa_0684
symbol: AFM11335.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: dal:Dalk_1557 transcriptional regulator, TetR family; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family.


ensembl_gene_id: Turpa_0685
symbol: AFM11336.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: slt:Slit_2188 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.


ensembl_gene_id: Turpa_0688
symbol: AFM11339.1
gene_biotype: protein_coding
description:
  InterPro IPR006652; KEGG: ppy:PPE_02660 kelch repeat protein; PFAM: Kelch repeat type 1; SPTR: Kelch repeat-containing protein.


ensembl_gene_id: Turpa_0690
symbol: AFM11341.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: lch:Lcho_1598 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein.


ensembl_gene_id: Turpa_0691
symbol: AFM11342.1
gene_biotype: protein_coding
description:
  PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: cob:COB47_1985 glycine C-acetyltransferase; PFAM: Aminotransferase, class I/II; SPTR: Glycine C-acetyltransferase.


ensembl_gene_id: Turpa_0693
symbol: AFM11344.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF461); COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: cps:CPS_4755 hypothetical protein; PFAM: DR1885-like metal-binding protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0694
symbol: AFM11345.1
gene_biotype: protein_coding
description:
  PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: mea:Mex_1p3435 electron transport protein SenC-related; PFAM: Copper chaperone SCO1/SenC; SPTR: Electron transport protein SenC-related.


ensembl_gene_id: Turpa_0695
symbol: AFM11346.1
gene_biotype: protein_coding
description:
  NifU family SUF system FeS assembly protein; PFAM: NifU-like N terminal domain; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; KEGG: art:Arth_1236 NifU family SUF system FeS assembly protein; SPTR: SUF system FeS assembly protein.


ensembl_gene_id: Turpa_0696
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Turpa_0698
symbol: AFM11349.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: psa:PST_3577 GGDEF domain-containing protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: GGDEF domain protein; TIGRFAM: Diguanylate cyclase, predicted.


ensembl_gene_id: Turpa_0699
symbol: thrS
gene_biotype: protein_coding
description:
  Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; COGs: COG0441 Threonyl-tRNA synthetase; InterPro IPR012947:IPR002314:IPR004154:IPR002320; KEGG: tra:Trad_1638 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; Belongs to [...]


ensembl_gene_id: Turpa_0700
symbol: AFM11351.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl hydrolases family 18; COGs: COG3858 glycosyl hydrolase; InterPro IPR001223:IPR011583; KEGG: lbf:LBF_1787 hydrolase; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II; SPTR: Putative glycosidase; Belongs to the glycosyl hydrolase 18 family.


ensembl_gene_id: Turpa_0702
symbol: AFM11353.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; Heme NO binding associated; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: ter:Tery_3999 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.


ensembl_gene_id: Turpa_0707
symbol: AFM11358.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: bpu:BPUM_0153 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: YbbC.


ensembl_gene_id: Turpa_0708
symbol: AFM11359.1
gene_biotype: protein_coding
description:
  PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; COGs: COG0370 Fe2+ transport system protein B; InterPro IPR002917:IPR011619:IPR011642:IPR011640:IPR003373; KEGG: caa:Caka_2817 ferrous iron transport protein B; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B.


ensembl_gene_id: Turpa_0709
symbol: AFM11360.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: FeoA domain; KEGG: dra:DR_1220 ferrous iron transport protein A; SPTR: Ferrous iron transport protein A.


ensembl_gene_id: Turpa_0712
symbol: AFM11363.1
gene_biotype: protein_coding
description:
  PFAM: Amidohydrolase family; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680; KEGG: hypothetical protein; PFAM: Amidohydrolase 1; SPTR: N-acyl-D-glutamate amidohydrolase.


ensembl_gene_id: Turpa_0714
symbol: AFM11365.1
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: lic:LIC10958 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Zn-dependent alcohol dehydrogenase.


ensembl_gene_id: Turpa_0715
symbol: AFM11366.1
gene_biotype: protein_coding
description:
  KEGG: dre:100332189 hypothetical protein LOC100332189; SPTR: Coagulation factor 5/8 type domain protein.


ensembl_gene_id: Turpa_0717
symbol: AFM11368.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: rmr:Rmar_0365 ABC transporter-like protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Turpa_0719
symbol: AFM11370.1
gene_biotype: protein_coding
description:
  PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: npu:Npun_F0835 PilT domain-containing protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein.


ensembl_gene_id: Turpa_0720
symbol: AFM11371.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: kol:Kole_0692 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: Turpa_0721
symbol: AFM11372.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: lsg:lse_0157 sugar ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter, permease protein.


ensembl_gene_id: Turpa_0722
symbol: AFM11373.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tbo:Thebr_0268 family 1 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Putative maltose-binding protein.


ensembl_gene_id: Turpa_0724
symbol: AFM11375.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF3532); KEGG: slt:Slit_2187 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0725
symbol: AFM11376.1
gene_biotype: protein_coding
description:
  PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR004193:IPR006047:IPR006589; KEGG: hor:Hore_13880 pullulanase, type I; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Pullulanase, type I.


ensembl_gene_id: Turpa_0726
symbol: AFM11377.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 13 domain protein; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR004193:IPR006047:IPR006589; KEGG: mxa:MXAN_5376 glycosy hydrolase family protein; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Glycosyl hydrolase, family 13.


ensembl_gene_id: Turpa_0728
symbol: AFM11379.1
gene_biotype: protein_coding
description:
  PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; COGs: COG0297 Glycogen synthase; InterPro IPR013534:IPR001296; KEGG: son:SO_1499 glycogen synthase; PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; SPTR: Starch (Glycogen) synthase.


ensembl_gene_id: Turpa_0729
symbol: AFM11380.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR004193:IPR006047:IPR006589:IPR011837; KEGG: dak:DaAHT2_0475 glycogen debranching enzyme GlgX; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: Glycogen d [...]


ensembl_gene_id: Turpa_0730
symbol: AFM11381.1
gene_biotype: protein_coding
description:
  Peptidase M3A and M3B thimet/oligopeptidase F; PFAM: Peptidase family M3; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: ana:alr0880 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; SPTR: Oligopeptidase A.


ensembl_gene_id: Turpa_0731
symbol: AFM11382.1
gene_biotype: protein_coding
description:
  Bifunctional deaminase-reductase domain protein; PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: dps:DP0705 dihydrofolate reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0732
symbol: AFM11383.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: dps:DPPB97 transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Probable transcriptional regulator.


ensembl_gene_id: Turpa_0735
symbol: AFM11386.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 77; PFAM: 4-alpha-glucanotransferase; Alpha amylase, catalytic domain; TIGRFAM: 4-alpha-glucanotransferase; COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR006047:IPR003385:IPR006589; KEGG: mrb:Mrub_1831 alpha amylase catalytic subunit; PFAM: Glycoside hydrolase, family 77; Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region.


ensembl_gene_id: Turpa_0736
symbol: AFM11387.1
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: Turpa_0737
symbol: AFM11388.1
gene_biotype: protein_coding
description:
  ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterPro IPR004014:IPR008250:IPR005834:IPR006068:IPR001757; KEGG: aar:Acear_2001 ATPase P; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; SPTR: ATPase [...]


ensembl_gene_id: Turpa_0741
symbol: AFM11392.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: lbf:LBF_1487 biotin carboxylase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0742
symbol: AFM11393.1
gene_biotype: protein_coding
description:
  PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; COGs: COG0259 Pyridoxamine-phosphate oxidase; InterPro IPR011576:IPR019576:IPR000659; KEGG: brh:RBRH_01081 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: Pyridoxamine 5'-phosphate oxidase.


ensembl_gene_id: Turpa_0743
symbol: AFM11394.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: pla:Plav_0444 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family.


ensembl_gene_id: Turpa_0744
symbol: AFM11395.1
gene_biotype: protein_coding
description:
  PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: lic:LIC13135 outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein.


ensembl_gene_id: Turpa_0745
symbol: AFM11396.1
gene_biotype: protein_coding
description:
  Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; InterPro IPR001123; KEGG: scl:sce2066 putative LysE type translocator; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein AlNc14C2G325; manually curated.


ensembl_gene_id: Turpa_0746
symbol: AFM11397.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF904); KEGG: lic:LIC12460 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0750
symbol: AFM11401.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013656:IPR000160:IPR001633:IPR000014; KEGG: gca:Galf_1879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; SPTR: Diguanylate [...]


ensembl_gene_id: Turpa_0751
symbol: AFM11402.1
gene_biotype: protein_coding
description:
  Arsenate reductase; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; arsenate reductase (glutaredoxin); COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660:IPR006659; KEGG: pla:Plav_0438 arsenate reductase; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; TIGRFAM: Arsenate reductase; Belongs to the ArsC family.


ensembl_gene_id: Turpa_0752
symbol: AFM11403.1
gene_biotype: protein_coding
description:
  PFAM: DNA / pantothenate metabolism flavoprotein; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR007085; KEGG: phosphopantothenoylcysteine decarboxylase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; SPTR: Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; manually curated.


ensembl_gene_id: Turpa_0754
symbol: AFM11405.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: dat:HRM2_09610 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0756
symbol: AFM11407.1
gene_biotype: protein_coding
description:
  Biotin/lipoyl attachment domain-containing protein; PFAM: Biotin-requiring enzyme; InterPro IPR000089; KEGG: lbl:LBL_1512 biotin-requiring enzyme; PFAM: Biotin/lipoyl attachment; SPTR: Biotin-requiring enzyme.


ensembl_gene_id: Turpa_0757
symbol: AFM11408.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: lbf:LBF_0570 adenylate cyclase-like protein; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylyl cyclase class-3/4/guanylyl cyclase.


ensembl_gene_id: Turpa_0759
symbol: AFM11410.1
gene_biotype: protein_coding
description:
  Putative signal transduction protein with CBS domains; PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: CBS domain containing membrane protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing membrane protein.


ensembl_gene_id: Turpa_0761
symbol: AFM11412.1
gene_biotype: protein_coding
description:
  PFAM: Lectin C-type domain; Phosphatidylinositol-specific phospholipase C, X domain; InterPro IPR001304; KEGG: gpb:HDN1F_04850 hypothetical protein; PFAM: C-type lectin; SPTR: QXW lectin repeat protein.


ensembl_gene_id: Turpa_0762
symbol: AFM11413.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: SPFH domain / Band 7 family; COGs: COG4260 Putative virion core protein (lumpy skin disease virus); KEGG: lbf:LBF_0154 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0763
symbol: AFM11414.1
gene_biotype: protein_coding
description:
  PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: lbf:LBF_0624 geranyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase; OPP synthetase).


ensembl_gene_id: Turpa_0766
symbol: AFM11417.1
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: rsk:RSKD131_1938 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: Probable molybdopterin biosynthesis protein.


ensembl_gene_id: Turpa_0767
symbol: AFM11418.1
gene_biotype: protein_coding
description:
  PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: lbf:LBF_1450 alpha/beta hydrolase; PFAM: Patatin; SPTR: Putative esterase; putative signal peptide.


ensembl_gene_id: Turpa_0768
symbol: AFM11419.1
gene_biotype: protein_coding
description:
  PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; COGs: COG1816 Adenosine deaminase; HAMAP: Adenosine deaminase; InterPro IPR001365:IPR006330; KEGG: ccb:Clocel_4333 adenosine deaminase; PFAM: Adenosine/AMP deaminase; SPTR: Adenosine deaminase; TIGRFAM: Adenosine deaminase.


ensembl_gene_id: Turpa_0770
symbol: AFM11421.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein; PFAM: FlhB HrpN YscU SpaS Family; KEGG: gtn:GTNG_1060 flagellar biosynthesis protein; SPTR: Flagellar biosynthesis.


ensembl_gene_id: Turpa_0771
symbol: AFM11422.1
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; PFAM: HD domain; COGs: COG2206 HD-GYP domain; InterPro IPR006674; KEGG: lbl:LBL_1652 response regulator; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Response regulator with HD-GYP domain.


ensembl_gene_id: Turpa_0772
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Turpa_0773
symbol: AFM11424.1
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: nla:NLA_18170 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Ribosomal-protein-alanine acetyltransferase.


ensembl_gene_id: Turpa_0782
symbol: AFM11433.1
gene_biotype: protein_coding
description:
  TIGRFAM: clan AA aspartic protease, AF_0612 family; KEGG: syn:slr0890 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: clan AA aspartic protease, AF_0612 family.


ensembl_gene_id: Turpa_0783
symbol: AFM11434.1
gene_biotype: protein_coding
description:
  PFAM: BFD-like [2Fe-2S] binding domain; InterPro IPR007419; KEGG: lbl:LBL_2838 bacterioferritin-associated ferredoxin; PFAM: BFD-like [2Fe-2S]-binding region; SPTR: Bacterioferritin-associated ferredoxin.


ensembl_gene_id: Turpa_0784
symbol: AFM11435.1
gene_biotype: protein_coding
description:
  InterPro IPR001440:IPR019734; KEGG: lil:LA_1522 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0787
symbol: AFM11438.1
gene_biotype: protein_coding
description:
  InterPro IPR004360; KEGG: azo:azo3718 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0790
symbol: AFM11441.1
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: glo:Glov_1517 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Phosphoesterase PA-phosphatase related.


ensembl_gene_id: Turpa_0792
symbol: carB
gene_biotype: protein_coding
description:
  PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR005481:IPR005479:IPR005480:IPR011607:IPR006275; KEGG: lic:LIC12883 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl  [...]


ensembl_gene_id: Turpa_0793
symbol: AFM11444.1
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207:IPR004105:IPR003594:IPR002545; KEGG: gka:GK1242 two-component sensor histidine kinase (chemotaxis protein); PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimer [...]


ensembl_gene_id: Turpa_0795
symbol: AFM11446.1
gene_biotype: protein_coding
description:
  PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: lil:LA_1734 anti-sigma factor antagonist-like protein; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Antisigma factor antagonist-related protein; TIGRFAM: Anti-sigma factor antagonist.


ensembl_gene_id: Turpa_0796
symbol: AFM11447.1
gene_biotype: protein_coding
description:
  COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; KEGG: lbf:LBF_0234 [acyl-carrier protein] S-malonyltransferase; SPTR: Fatty acid synthase subunit beta.


ensembl_gene_id: Turpa_0797
symbol: AFM11448.1
gene_biotype: protein_coding
description:
  PFAM: RHS Repeat; Peptidase family M23; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR013517:IPR006530:IPR016047; KEGG: lic:LIC10825 cytoplasmic membrane protein; PFAM: Peptidase M23; FG-GAP; YD repeat; SPTR: Rhs family protein; TIGRFAM: RHS repeat-associated core domain-containing protein; YD repeat.


ensembl_gene_id: Turpa_0801
symbol: AFM11452.1
gene_biotype: protein_coding
description:
  PFAM: Ion transport protein; InterPro IPR005821; KEGG: caa:Caka_2665 ion transport protein; PFAM: Ion transport; SPTR: K+ transporter, Kef-type.


ensembl_gene_id: Turpa_0803
symbol: AFM11454.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: ssm:Spirs_2081 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein.


ensembl_gene_id: Turpa_0804
symbol: AFM11455.1
gene_biotype: protein_coding
description:
  Sporulation domain-containing protein; InterPro IPR007730; PFAM: Sporulation/cell division region, bacteria.


ensembl_gene_id: Turpa_0805
symbol: AFM11456.1
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family; COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: sul:SYO3AOP1_0115 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family.


ensembl_gene_id: Turpa_0806
symbol: AFM11457.1
gene_biotype: protein_coding
description:
  Transcriptional attenuator, LytR family; PFAM: Cell envelope-related transcriptional attenuator domain; KEGG: lic:LIC12368 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0807
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Turpa_0808
symbol: AFM11459.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF3467); KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0809
symbol: AFM11460.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; PFAM: OmpA family; InterPro IPR006665; KEGG: dba:Dbac_0417 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein.


ensembl_gene_id: Turpa_0810
symbol: AFM11461.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: lic:LIC13218 carbonic anhydrase/acetyltransferase; SPTR: Carbonic anhydrase/acetyltransferase.


ensembl_gene_id: Turpa_0811
symbol: AFM11462.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: WD40-like Beta Propeller Repeat; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: slo:Shew_1527 translocation protein TolB; SPTR: Protein tolB.


ensembl_gene_id: Turpa_0812
symbol: AFM11463.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: cyj:Cyan7822_1834 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_0814
symbol: AFM11465.1
gene_biotype: protein_coding
description:
  COGs: COG1306 conserved hypothetical protein; KEGG: tro:trd_1026 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0815
symbol: AFM11466.1
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Turpa_0817
symbol: AFM11468.1
gene_biotype: protein_coding
description:
  COGs: COG3825 conserved hypothetical protein; KEGG: sfu:Sfum_1614 hypothetical protein; SPTR: Conserved hypothetical cytosolic protein.


ensembl_gene_id: Turpa_0819
symbol: AFM11470.1
gene_biotype: protein_coding
description:
  ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG0714 MoxR-like ATPase; InterPro IPR011704:IPR003593; KEGG: sfu:Sfum_1615 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core; SPTR: ATPase associated with various cellular activities, AAA_5.


ensembl_gene_id: Turpa_0821
symbol: AFM11472.1
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; PFAM: Flavin-binding monooxygenase-like; COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR006076; KEGG: maq:Maqu_3830 cyclohexanone monooxygenase; PFAM: FAD dependent oxidoreductase; SPTR: Monooxygenase, flavin-binding family protein.


ensembl_gene_id: Turpa_0822
symbol: AFM11473.1
gene_biotype: protein_coding
description:
  Sulfate transporter/antisigma-factor antagonist STAS; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645; KEGG: lbf:LBF_2261 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist.


ensembl_gene_id: Turpa_0825
symbol: AFM11476.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: fba:FIC_02138 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family.


ensembl_gene_id: Turpa_0826
symbol: AFM11477.1
gene_biotype: protein_coding
description:
  Arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657:IPR004706; KEGG: sli:Slin_3940 arsenic resistance protein; PFAM: Bile acid:sodium symporter; SPTR: Arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3.


ensembl_gene_id: Turpa_0827
symbol: AFM11478.1
gene_biotype: protein_coding
description:
  PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: psn:Pedsa_0583 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase.


ensembl_gene_id: Turpa_0828
symbol: AFM11479.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function, DUF255; KEGG: rmr:Rmar_2735 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0829
symbol: AFM11480.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR013655:IPR000160:IPR001633:IPR001610:IPR000014; KEGG: slt:Slit_1460 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; S [...]


ensembl_gene_id: Turpa_0830
symbol: AFM11481.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: eoh:ECO103_3246 nitric oxide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-Disulfide oxidoreductase.


ensembl_gene_id: Turpa_0831
symbol: AFM11482.1
gene_biotype: protein_coding
description:
  Rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: pmy:Pmen_4403 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin.


ensembl_gene_id: Turpa_0832
symbol: AFM11483.1
gene_biotype: protein_coding
description:
  PFAM: Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR003251; KEGG: tbd:Tbd_2317 rubrerythrin/nigerythrin-like protein; PFAM: Rubrerythrin; SPTR: Rubrerythrin/nigerythrin-like protein.


ensembl_gene_id: Turpa_0833
symbol: AFM11484.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: lbf:LBF_0664 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Putative oxidoreductase, short-chain dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_0834
symbol: AFM11485.1
gene_biotype: protein_coding
description:
  PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: dol:Dole_2193 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.


ensembl_gene_id: Turpa_0837
symbol: AFM11488.1
gene_biotype: protein_coding
description:
  PFAM: Sulfate transporter family; Cyclic nucleotide-binding domain; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645:IPR000595; KEGG: dar:Daro_3904 cyclic nucleotide-binding:sulfate transporter/antisigma-factor antagonist STAS:xanthine/uracil/vitamin C permease:sulphate transporter; PFAM: Cyclic nucleotide-binding; Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding:Sulfate transporter/antisigma-factor antagonist STAS:Xanthine/ura [...]


ensembl_gene_id: Turpa_0838
symbol: AFM11489.1
gene_biotype: protein_coding
description:
  PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: NmrA family protein; SPTR: NmrA family protein.


ensembl_gene_id: Turpa_0839
symbol: AFM11490.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: lbf:LBF_3192 adenylate cyclase-like protein; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Putative adenylate cyclase; putative membrane protein.


ensembl_gene_id: Turpa_0840
symbol: AFM11491.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: lbf:LBF_3192 adenylate cyclase-like protein; SPTR: Putative adenylate cyclase; putative membrane protein.


ensembl_gene_id: Turpa_0841
symbol: AFM11492.1
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: bmj:BMULJ_04370 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.


ensembl_gene_id: Turpa_0843
symbol: AFM11494.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: lbf:LBF_3241 AcrR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative transcriptional regulator, TetR family.


ensembl_gene_id: Turpa_0844
symbol: AFM11495.1
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: lil:LA_2629 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Alcohol dehydrogenase.


ensembl_gene_id: Turpa_0845
symbol: AFM11496.1
gene_biotype: protein_coding
description:
  PFAM: N-6 DNA Methylase; KEGG: tra:Trad_0119 type III restriction system methylase; SPTR: Type III restriction system methylase.


ensembl_gene_id: Turpa_0846
symbol: AFM11497.1
gene_biotype: protein_coding
description:
  PFAM: YcfA-like protein; InterPro IPR012933; KEGG: bhy:BHWA1_02259 YcfA-like protein; PFAM: YcfA-like; SPTR: YcfA-like.


ensembl_gene_id: Turpa_0847
symbol: AFM11498.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: cyp:PCC8801_0001 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0852
symbol: AFM11503.1
gene_biotype: protein_coding
description:
  InterPro IPR019734; KEGG: pph:Ppha_1121 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein.


ensembl_gene_id: Turpa_0853
symbol: AFM11504.1
gene_biotype: protein_coding
description:
  KEGG: nit:NAL212_3178 MazG nucleotide pyrophosphohydrolase; SPTR: MazG nucleotide pyrophosphohydrolase.


ensembl_gene_id: Turpa_0854
symbol: AFM11505.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2075; PFAM: Uncharacterized conserved protein (DUF2075); GIY-YIG catalytic domain; COGs: COG3410 conserved hypothetical protein; InterPro IPR000305:IPR018647; KEGG: mlu:Mlut_19650 hypothetical protein; PFAM: Protein of unknown function DUF2075; Excinuclease ABC, C subunit, N-terminal; SPTR: Putative uncharacterized protein; Belongs to the peptidase S24 family.


ensembl_gene_id: Turpa_0856
symbol: AFM11507.1
gene_biotype: protein_coding
description:
  PFAM: Stage II sporulation protein E (SpoIIE); InterPro IPR010822:IPR001932; KEGG: lbf:LBF_0573 TPR repeat-containing protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0857
symbol: AFM11508.1
gene_biotype: protein_coding
description:
  PFAM: S-adenosylmethionine-dependent methyltransferase; COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR003402; KEGG: plm:Plim_3930 hypothetical protein; PFAM: Protein of unknown function Met10; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0858
symbol: AFM11509.1
gene_biotype: protein_coding
description:
  Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1231 Monoamine oxidase; InterPro IPR002937; KEGG: nfa:nfa30780 putative oxidoreductase; PFAM: Amine oxidase; SPTR: Putative oxidoreductase.


ensembl_gene_id: Turpa_0860
symbol: AFM11511.1
gene_biotype: protein_coding
description:
  PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; COGs: COG1942 Uncharacterized protein 4-oxalocrotonate tautomerase homolog; InterPro IPR004370:IPR018191; KEGG: gca:Galf_2414 4-oxalocrotonate tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase, subgroup.


ensembl_gene_id: Turpa_0861
symbol: AFM11512.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: abo:ABO_1918 short-chain dehydrogenase/reductase family protein; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_0863
symbol: AFM11514.1
gene_biotype: protein_coding
description:
  COGs: COG3744 conserved hypothetical protein; KEGG: sku:Sulku_2795 PilT protein domain protein; SPTR: PilT protein domain protein.


ensembl_gene_id: Turpa_0864
symbol: AFM11515.1
gene_biotype: protein_coding
description:
  PFAM: Tryptophan-rich protein (DUF2389); TIGRFAM: tryptophan-rich conserved hypothetical protein; InterPro IPR012663; KEGG: vsa:VSAL_II0223 hypothetical protein; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02450, tryptophan-rich.


ensembl_gene_id: Turpa_0865
symbol: AFM11516.1
gene_biotype: protein_coding
description:
  PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; COGs: COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase; InterPro IPR007357; KEGG: aex:Astex_1298 deoxyribodipyrimidine photolyase-related protein; PFAM: Deoxyribodipyrimidine photolyase-related protein; SPTR: Deoxyribodipyrimidine photolyase-related protein.


ensembl_gene_id: Turpa_0866
symbol: AFM11517.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: lpp:lpp0291 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0867
symbol: AFM11518.1
gene_biotype: protein_coding
description:
  PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: hoh:Hoch_1862 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Predicted nucleoside-diphosphate-sugar epimerase.


ensembl_gene_id: Turpa_0868
symbol: AFM11519.1
gene_biotype: protein_coding
description:
  Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport; COGs: COG4276 conserved hypothetical protein; InterPro IPR005031; KEGG: scl:sce1328 hypothetical protein; PFAM: Streptomyces cyclase/dehydrase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0869
symbol: AFM11520.1
gene_biotype: protein_coding
description:
  InterPro IPR000073; KEGG: pna:Pnap_1705 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0870
symbol: AFM11521.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: cpi:Cpin_2014 outer membrane insertion C-terminal signal; SPTR: Outer membrane insertion C-terminal signal.


ensembl_gene_id: Turpa_0872
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Turpa_0875
symbol: AFM11526.1
gene_biotype: protein_coding
description:
  InterPro IPR003368; KEGG: mel:Metbo_1649 polymorphic membrane protein; PFAM: Polymorphic membrane protein, Chlamydia; SPTR: Polymorphic membrane protein Chlamydia.


ensembl_gene_id: Turpa_0876
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Turpa_0877
symbol: AFM11528.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; FIST C domain; FIST N domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR013702:IPR019494:IPR001054; KEGG: slt:Slit_1543 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; FIST domain, N-terminal; FIST C domain; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.


ensembl_gene_id: Turpa_0878
symbol: AFM11529.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1554); InterPro IPR011448; KEGG: lbf:LBF_0124 hypothetical protein; PFAM: Protein of unknown function DUF1554; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0879
symbol: AFM11530.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR007630:IPR014284; KEGG: sti:Sthe_3345 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70.


ensembl_gene_id: Turpa_0880
symbol: AFM11531.1
gene_biotype: protein_coding
description:
  InterPro IPR013096; KEGG: nde:NIDE3684 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0881
symbol: AFM11532.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; KEGG: rsl:RPSI07_1797 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0883
symbol: AFM11534.1
gene_biotype: protein_coding
description:
  PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gpb:HDN1F_27760 predicted beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Predicted beta-lactamase.


ensembl_gene_id: Turpa_0884
symbol: AFM11535.1
gene_biotype: protein_coding
description:
  PFAM: Cytochrome P450; COGs: COG2124 Cytochrome P450; InterPro IPR001128; KEGG: hau:Haur_2324 cytochrome P450; PFAM: Cytochrome P450; SPTR: Cytochrome P450.


ensembl_gene_id: Turpa_0886
symbol: AFM11537.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; PFAM: OmpA family; InterPro IPR006665; KEGG: lbf:LBF_3040 OmpA-family lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Putative bacterial outer membrane protein; putative signal peptide.


ensembl_gene_id: Turpa_0888
symbol: AFM11539.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: mxa:MXAN_7231 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0889
symbol: AFM11540.1
gene_biotype: protein_coding
description:
  Transporter, CPA2 family; PFAM: Sodium/hydrogen exchanger family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: psn:Pedsa_3481 sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; SPTR: Na(+)/H(+) antiporter; TC 2.A.37.


ensembl_gene_id: Turpa_0890
symbol: AFM11541.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Predicted metal-dependent hydrolase; COGs: COG3687 metal-dependent hydrolase; InterPro IPR016516; KEGG: abo:ABO_2562 hypothetical protein; PFAM: Uncharacterised conserved protein UCP07580; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0891
symbol: AFM11542.1
gene_biotype: protein_coding
description:
  PFAM: PemK-like protein; KEGG: nwa:Nwat_3167 MazE/toxin transcriptional modulator MazF; SPTR: PemK-like protein.


ensembl_gene_id: Turpa_0893
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Turpa_0896
symbol: AFM11547.1
gene_biotype: protein_coding
description:
  Auxin Efflux Carrier; PFAM: Membrane transport protein; COGs: COG0679 permease; InterPro IPR004776; KEGG: slt:Slit_2209 auxin efflux carrier; PFAM: Auxin efflux carrier; SPTR: Auxin Efflux Carrier.


ensembl_gene_id: Turpa_0898
symbol: AFM11549.1
gene_biotype: protein_coding
description:
  Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: lbf:LBF_4066 glutamate synthase (NADH); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; SPTR: Glutamate synthase large chain.


ensembl_gene_id: Turpa_0899
symbol: AFM11550.1
gene_biotype: protein_coding
description:
  Glutamate synthase, NADH/NADPH, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006005; KEGG: lbf:LBF_4065 NADPH-dependent glutamate synthase beta chain - related oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Glutamate synthase (NADPH); TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1.


ensembl_gene_id: Turpa_0900
symbol: AFM11551.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF2804); KEGG: scl:sce4458 hypothetical protein; SPTR: Putative membrane protein.


ensembl_gene_id: Turpa_0901
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Turpa_0903
symbol: AFM11554.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1175); COGs: COG3234 conserved hypothetical protein; InterPro IPR009558; KEGG: pfo:Pfl01_5001 hypothetical protein; PFAM: Protein of unknown function DUF1175; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0906
symbol: AFM11557.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: lbl:LBL_2634 drug/metabolite transporter family permease; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Drug/metabolite transporter (DMT) family permease.


ensembl_gene_id: Turpa_0908
symbol: AFM11559.1
gene_biotype: protein_coding
description:
  Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: lil:LA_2605 ParA protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: ParA protein.


ensembl_gene_id: Turpa_0909
symbol: AFM11560.1
gene_biotype: protein_coding
description:
  GTP-binding signal recognition particle SRP54 G- domain-containing protein; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: lbf:LBF_0910 flagellar biosynthesis regulator FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellar biosynthesis protein FlhF (Flagella associated GTP-binding protein).


ensembl_gene_id: Turpa_0910
symbol: AFM11561.1
gene_biotype: protein_coding
description:
  Type III secretion FHIPEP protein; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR001712; KEGG: lbl:LBL_1842 endoflagellar biosynthesis protein; PFAM: Type III secretion system FHIPEP; SPTR: Endoflagellar biosynthesis protein.


ensembl_gene_id: Turpa_0911
symbol: AFM11562.1
gene_biotype: protein_coding
description:
  Type III secretion exporter; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; COGs: COG1377 Flagellar biosynthesis pathway component FlhB; InterPro IPR006135; KEGG: sta:STHERM_c09290 hypothetical protein; PFAM: Type III secretion exporter; SPTR: Flagellar biosynthetic protein FlhB.


ensembl_gene_id: Turpa_0912
symbol: AFM11563.1
gene_biotype: protein_coding
description:
  PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: dba:Dbac_2664 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE.


ensembl_gene_id: Turpa_0914
symbol: AFM11565.1
gene_biotype: protein_coding
description:
  Sigma E regulatory protein, MucB/RseB; KEGG: ttu:TERTU_1996 hypothetical protein; SPTR: Hyopothetical protein.


ensembl_gene_id: Turpa_0915
symbol: AFM11566.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: MMPL family; COGs: COG1033 exporter of the RND superfamily protein; KEGG: ttu:TERTU_1995 hypothetical protein; SPTR: Exporters of the RND superfamily-like protein.


ensembl_gene_id: Turpa_0916
symbol: AFM11567.1
gene_biotype: protein_coding
description:
  PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: lic:LIC10661 hypothetical protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0917
symbol: AFM11568.1
gene_biotype: protein_coding
description:
  PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: slt:Slit_2327 activator of HSP90 ATPase 1 family protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein.


ensembl_gene_id: Turpa_0919
symbol: AFM11570.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DU1801); COGs: COG5646 conserved hypothetical protein; InterPro IPR014922; KEGG: sli:Slin_6095 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0921
symbol: AFM11571.1
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: pde:Pden_3355 gentamicin 3'-N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Gentamicin 3'-N-acetyltransferase.


ensembl_gene_id: Turpa_0924
symbol: AFM11573.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1428); COGs: COG5507 conserved hypothetical protein; InterPro IPR009874; KEGG: sjp:SJA_C1-24770 hypothetical protein; PFAM: Protein of unknown function DUF1428; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0925
symbol: AFM11574.1
gene_biotype: protein_coding
description:
  PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: hne:HNE_0022 GTP-binding protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: GTP-binding protein.


ensembl_gene_id: Turpa_0926
symbol: AFM11575.1
gene_biotype: protein_coding
description:
  PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: hoh:Hoch_1380 activator of HSP90 ATPase 1 family protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein.


ensembl_gene_id: Turpa_0927
symbol: AFM11576.1
gene_biotype: protein_coding
description:
  PFAM: 3-demethylubiquinone-9 3-methyltransferase; COGs: COG3865 conserved hypothetical protein; InterPro IPR009725; KEGG: lbl:LBL_2688 hypothetical protein; PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0928
symbol: AFM11577.1
gene_biotype: protein_coding
description:
  PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: Activator of Hsp90 ATPase 1 family protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein.


ensembl_gene_id: Turpa_0929
symbol: AFM11578.1
gene_biotype: protein_coding
description:
  Bifunctional deaminase-reductase domain protein; PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: rcu:RCOM_0359670 hypothetical protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0930
symbol: AFM11579.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: slt:Slit_2322 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family.


ensembl_gene_id: Turpa_0931
symbol: AFM11580.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, BolA protein family; PFAM: BolA-like protein; COGs: COG0271 Stress-induced morphogen (activity unknown); InterPro IPR002634; KEGG: hne:HNE_0084 BolA family protein; PFAM: BolA-like protein; SPTR: BolA family protein; Belongs to the BolA/IbaG family.


ensembl_gene_id: Turpa_0934
symbol: AFM11583.1
gene_biotype: protein_coding
description:
  PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: msm:MSMEG_1742 oxidoreductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin; SPTR: Oxidoreductase.


ensembl_gene_id: Turpa_0935
symbol: AFM11584.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: abb:ABBFA_000999 linoleoyl-CoA desaturase(delta(6)-desaturase); PFAM: Fatty acid desaturase, type 1; SPTR: Linoleoyl-CoA desaturase(Delta(6)-desaturase).


ensembl_gene_id: Turpa_0936
symbol: AFM11585.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: lbl:LBL_2719 hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase with alpha/beta fold domain.


ensembl_gene_id: Turpa_0937
symbol: AFM11586.1
gene_biotype: protein_coding
description:
  TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: cno:NT01CX_0607 methyl-accepting chemotaxis protein; SPTR: Methyl-accepting chemotaxis protein; TIGRFAM: Phosphonate-binding periplasmic protein.


ensembl_gene_id: Turpa_0938
symbol: AFM11587.1
gene_biotype: protein_coding
description:
  PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR001932:IPR010822; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: HAMP linker domain; Protein phosphatase 2C-related; SPTR: Putative histidine kinase sensor protein; putative membrane protein.


ensembl_gene_id: Turpa_0942
symbol: AFM11591.1
gene_biotype: protein_coding
description:
  PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: cce:Ccel_1316 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase.


ensembl_gene_id: Turpa_0943
symbol: AFM11592.1
gene_biotype: protein_coding
description:
  PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: sur:STAUR_2907 sphingolipid C9-methyltransferase-like protein; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: Sphingolipid C9-methyltransferase-like protein.


ensembl_gene_id: Turpa_0944
symbol: AFM11593.1
gene_biotype: protein_coding
description:
  Hemerythrin HHE cation binding domain protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: Turpa_0945
symbol: AFM11594.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: lbf:LBF_0380 U32 family peptidase; PFAM: Peptidase U32; SPTR: Putative protease (U32 family).


ensembl_gene_id: Turpa_0946
symbol: AFM11595.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: sur:STAUR_0950 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: C-5 sterol desaturase.


ensembl_gene_id: Turpa_0947
symbol: AFM11596.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: mxa:MXAN_6906 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family.


ensembl_gene_id: Turpa_0948
symbol: AFM11597.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR006339:IPR007159; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator AbrB; TIGRFAM: Transcription regulator AbrB.


ensembl_gene_id: Turpa_0951
symbol: AFM11600.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: bba:Bd2815 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0953
symbol: AFM11602.1
gene_biotype: protein_coding
description:
  Polymorphic membrane protein Chlamydia; InterPro IPR006626:IPR003368; KEGG: mel:Metbo_1511 hypothetical protein; PFAM: Polymorphic membrane protein, Chlamydia; SPTR: Polymorphic outer membrane protein.


ensembl_gene_id: Turpa_0954
symbol: AFM11603.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: tbo:Thebr_1687 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_0955
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Turpa_0956
symbol: AFM11605.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF115; COGs: COG2604 conserved hypothetical protein; InterPro IPR002826; KEGG: lil:LA_1307 hypothetical protein; PFAM: Protein of unknown function DUF115; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0957
symbol: AFM11606.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: MMPL family; COGs: COG1033 exporter of the RND superfamily protein; KEGG: sur:STAUR_7992 hypothetical protein; SPTR: Conserved uncharacterized protein.


ensembl_gene_id: Turpa_0963
symbol: AFM11612.1
gene_biotype: protein_coding
description:
  PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: lbl:LBL_0873 pirin-related protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin-related protein; Belongs to the pirin family.


ensembl_gene_id: Turpa_0964
symbol: AFM11613.1
gene_biotype: protein_coding
description:
  Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014:IPR003661:IPR003594:IPR013656; KEGG: gsu:GSU0822 sensory box histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase [...]


ensembl_gene_id: Turpa_0966
symbol: AFM11615.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2071; PFAM: Uncharacterized conserved protein (COG2071); COGs: COG3361 conserved hypothetical protein; InterPro IPR018644; KEGG: tsa:AciPR4_3498 hypothetical protein; PFAM: Protein of unknown function DUF2071; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0967
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: Turpa_0968
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Turpa_0969
symbol: AFM11618.1
gene_biotype: protein_coding
description:
  KEGG: rpe:RPE_2657 filamentous haemagglutinin outer membrane protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0970
symbol: AFM11619.1
gene_biotype: protein_coding
description:
  TIGRFAM: integral membrane protein; KEGG: mcl:MCCL_0457 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0971
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: Turpa_0979
symbol: AFM11628.1
gene_biotype: protein_coding
description:
  PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR016048; KEGG: luciferase-like protein; PFAM: Luciferase-like, subgroup; SPTR: Luciferase-like; TIGRFAM: Luciferase family oxidoreductase, group 1.


ensembl_gene_id: Turpa_0981
symbol: AFM11630.1
gene_biotype: protein_coding
description:
  Asparaginase/glutaminase; PFAM: Asparaginase; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: rcu:RCOM_2021760 l-asparaginase, putative; PFAM: Asparaginase/glutaminase; SPTR: L-asparaginase, putative.


ensembl_gene_id: Turpa_0982
symbol: AFM11631.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: nhl:Nhal_2885 acetyltransferase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0983
symbol: AFM11632.1
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: zpr:ZPR_3888 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family protein.


ensembl_gene_id: Turpa_0984
symbol: AFM11633.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: oca:OCAR_5667 ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.


ensembl_gene_id: Turpa_0986
symbol: AFM11635.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Curli production assembly/transport component CsgG; KEGG: cyb:CYB_0517 CsgG family protein; SPTR: CsgG family protein.


ensembl_gene_id: Turpa_0987
symbol: AFM11636.1
gene_biotype: protein_coding
description:
  Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: slp:Slip_1161 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family.


ensembl_gene_id: Turpa_0988
symbol: AFM11637.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ote:Oter_3065 PA14 domain-containing protein; SPTR: Fibronectin type III domain protein.


ensembl_gene_id: Turpa_0990
symbol: AFM11639.1
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: Turpa_0991
symbol: AFM11640.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: zpr:ZPR_4697 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_0996
symbol: AFM11645.1
gene_biotype: protein_coding
description:
  Addiction module antidote; PFAM: SpoVT / AbrB like domain; TIGRFAM: putative addiction module antidote; InterPro IPR013432:IPR007159; KEGG: sru:SRU_2815 putative addiction module antidote; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator/antitoxin, MazE; TIGRFAM: Putative addiction module antidote.


ensembl_gene_id: Turpa_0997
symbol: AFM11646.1
gene_biotype: protein_coding
description:
  PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein; COGs: COG3654 Prophage maintenance system killer protein; InterPro IPR006440:IPR003812; KEGG: hna:Hneap_1982 death-on-curing family protein; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Death-on-curing family protein; TIGRFAM: Death-on-curing protein.


ensembl_gene_id: Turpa_0998
symbol: AFM11647.1
gene_biotype: protein_coding
description:
  PFAM: Phosphotransferase enzyme family; COGs: COG3178 phosphotransferase related to Ser/Thr protein kinase; InterPro IPR002575; KEGG: paa:Paes_0235 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: Aminoglycoside phosphotransferase.


ensembl_gene_id: Turpa_0999
symbol: AFM11648.1
gene_biotype: protein_coding
description:
  PFAM: RF-1 domain; COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: lbl:LBL_1430 peptidyl-tRNA hydrolase; PFAM: Class I peptide chain release factor; SPTR: Peptidyl-tRNA hydrolase.


ensembl_gene_id: Turpa_1000
symbol: AFM11649.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; PFAM: Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: pph:Ppha_2761 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: Nucleotidyl transferase.


ensembl_gene_id: Turpa_1001
symbol: AFM11650.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, TetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family; InterPro IPR001647:IPR004111; KEGG: rha:RHA1_ro02950 TetR family transcriptional regulator; PFAM: Tetracycline transcriptional regulator, TetR, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Probable transcriptional regulator, TetR family protein.


ensembl_gene_id: Turpa_1003
symbol: AFM11652.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: lbf:LBF_1043 adenylate cyclase-like protein; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Putative adenylate cyclase; putative membrane protein.


ensembl_gene_id: Turpa_1005
symbol: AFM11654.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase zinc-binding domain protein; PFAM: Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: NADPH:quinone reductase.


ensembl_gene_id: Turpa_1008
symbol: AFM11657.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: lbf:LBF_0592 hydrolase or acyltransferase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative hydrolase, alpha/beta superfamily.


ensembl_gene_id: Turpa_1012
symbol: AFM11661.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; InterPro IPR003736:IPR006683; KEGG: sur:STAUR_2288 thioesterase family protein; PFAM: Thioesterase superfamily; SPTR: Phenylacetic acid degradation-related protein; TIGRFAM: Phenylacetic acid degradation-related protein.


ensembl_gene_id: Turpa_1013
symbol: AFM11662.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: sno:Snov_2699 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family.


ensembl_gene_id: Turpa_1014
symbol: AFM11663.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF3703); KEGG: lbf:LBF_3029 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1015
symbol: AFM11664.1
gene_biotype: protein_coding
description:
  COGs: COG3934 Endo-beta-mannanase; KEGG: psu:Psesu_0448 mannan endo-1,4-beta-mannosidase; SPTR: Endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: Turpa_1016
symbol: AFM11665.1
gene_biotype: protein_coding
description:
  PFAM: HEPN domain; COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN; InterPro IPR007842; KEGG: lbl:LBL_0575 hypothetical protein; PFAM: HEPN; SMART: HEPN; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1017
symbol: AFM11666.1
gene_biotype: protein_coding
description:
  DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; InterPro IPR002934; KEGG: lbl:LBL_0576 hypothetical protein; PFAM: Nucleotidyltransferase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1019
symbol: AFM11668.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Predicted integral membrane protein (DUF2269); KEGG: alv:Alvin_1734 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1020
symbol: AFM11669.1
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase (quinone); PFAM: Flavodoxin-like fold; COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: lbf:LBF_0591 hypothetical protein; PFAM: Flavodoxin-like fold; SPTR: Putative oxidoreductase.


ensembl_gene_id: Turpa_1021
symbol: AFM11670.1
gene_biotype: protein_coding
description:
  PFAM: Transcriptional regulator PadR-like family; Virulence activator alpha C-term; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149:IPR018309; KEGG: lbf:LBF_0593 transcription regulator; PFAM: Transcriptional regulator PadR N-terminal-like; Transcriptional regulator PadR, C-terminal; SPTR: Putative transcriptional regulator, PadR family.


ensembl_gene_id: Turpa_1024
symbol: AFM11673.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Mu transposase, C-terminal; Protein of unknown function (DUF3592); KEGG: lbi:LEPBI_I1239 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1025
symbol: AFM11674.1
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR013519; KEGG: lbf:LBF_2445 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1030
symbol: AFM11679.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: pvi:Cvib_1650 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Uncharacterized conserved protein UCP016719.


ensembl_gene_id: Turpa_1031
symbol: AFM11680.1
gene_biotype: protein_coding
description:
  Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: tva:TVAG_291510 ankyrin repeat protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Ankyrin repeat protein, putative.


ensembl_gene_id: Turpa_1032
symbol: AFM11681.1
gene_biotype: protein_coding
description:
  PFAM: Polyketide cyclase / dehydrase and lipid transport; COGs: COG4891 conserved hypothetical protein; InterPro IPR019587; KEGG: gob:Gobs_3537 polyketide cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Polyketide cyclase/dehydrase.


ensembl_gene_id: Turpa_1033
symbol: AFM11682.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: bmd:BMD_0768 hypothetical protein; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1034
symbol: AFM11683.1
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase zinc-binding domain protein.


ensembl_gene_id: Turpa_1035
symbol: AFM11684.1
gene_biotype: protein_coding
description:
  PFAM: Pyridoxamine 5'-phosphate oxidase; KEGG: pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.


ensembl_gene_id: Turpa_1036
symbol: AFM11685.1
gene_biotype: protein_coding
description:
  PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: nda:Ndas_1825 SSS sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Turpa_1037
symbol: AFM11686.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Putative transposase; KEGG: lbf:LBF_0426 transposase; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_1042
symbol: AFM11691.1
gene_biotype: protein_coding
description:
  PFAM: MGS-like domain; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607; KEGG: pmz:HMPREF0659_A5414 MGS-like domain protein; PFAM: MGS-like; SPTR: Bifunctional purine biosynthesis protein PurH.


ensembl_gene_id: Turpa_1043
symbol: AFM11692.1
gene_biotype: protein_coding
description:
  HAD superfamily (subfamily IA) hydrolase, TIGR02254; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR011951:IPR005834; KEGG: cby:CLM_1123 HAD superfamily hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD superfamily (Subfamily IA) hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB.


ensembl_gene_id: Turpa_1045
symbol: AFM11694.1
gene_biotype: protein_coding
description:
  PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR013656; KEGG: lbl:LBL_1852 hypothetical protein; PFAM: PAS fold-4; SMART: PAS; SPTR: Putative uncharacterized protein; TIGRFAM: PAS.


ensembl_gene_id: Turpa_1046
symbol: AFM11695.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase with GAF sensor; PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR003018; KEGG: lpn:lpg1490 adenylate cyclase PLUS two component hybrid sensor and regulator; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate cyclase PLUS two component hybrid sensor and regulator.


ensembl_gene_id: Turpa_1047
symbol: AFM11696.1
gene_biotype: protein_coding
description:
  PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: gpb:HDN1F_19090 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Turpa_1051
symbol: AFM11700.1
gene_biotype: protein_coding
description:
  PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: lbl:LBL_2858 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent RNA helicase (Superfamily II); manually curated; Belongs to the DEAD box helicase family.


ensembl_gene_id: Turpa_1052
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Turpa_1053
symbol: AFM11702.1
gene_biotype: protein_coding
description:
  PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: peptide-methionine (R)-S-oxide reductase; PFAM: Methionine sulphoxide reductase B; SPTR: Peptide-methionine (R)-S-oxide reductase.


ensembl_gene_id: Turpa_1055
symbol: AFM11704.1
gene_biotype: protein_coding
description:
  COGs: COG0183 Acetyl-CoA acetyltransferase; KEGG: lbf:LBF_0491 acetyl-CoA acetyltransferase; SPTR: Putative thiolase.


ensembl_gene_id: Turpa_1056
symbol: AFM11705.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance protein/dioxygenase; TIGRFAM: lactoylglutathione lyase; COGs: COG0346 Lactoylglutathione lyase and related lyase; InterPro IPR004360; KEGG: azc:AZC_1934 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Lactoylglutathione lyase.


ensembl_gene_id: Turpa_1058
symbol: AFM11707.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1554); InterPro IPR011448; KEGG: lbf:LBF_0588 putative lipoprotein; PFAM: Protein of unknown function DUF1554; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1062
symbol: AFM11711.1
gene_biotype: protein_coding
description:
  PFAM: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro IPR019547; KEGG: lic:LIC12673 hypothetical protein; PFAM: Kua-ubiquitin conjugating enzyme hybrid, localisation; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1063
symbol: AFM11712.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; InterPro IPR005079; KEGG: wvi:Weevi_1574 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Putative membrane protein.


ensembl_gene_id: Turpa_1066
symbol: AFM11715.1
gene_biotype: protein_coding
description:
  PFAM: Fibronectin type III domain; InterPro IPR003961; KEGG: llo:LLO_3002 transmembrane protein (fibronectin III domain and GP5 C-terminal repeat); PFAM: Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Putative transmembrane protein (Fibronectin III domain and Gp5 C-terminal repeat).


ensembl_gene_id: Turpa_1067
symbol: AFM11716.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ttm:Tthe_2353 glycoside hydrolase family 18; SPTR: Glycoside hydrolase family 18.


ensembl_gene_id: Turpa_1071
symbol: AFM11720.1
gene_biotype: protein_coding
description:
  YceI family protein; PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: gau:GAU_0927 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; Belongs to the UPF0312 family.


ensembl_gene_id: Turpa_1076
symbol: AFM11725.1
gene_biotype: protein_coding
description:
  PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR005744:IPR004254; KEGG: ote:Oter_1686 hemolysin III family channel protein; PFAM: Hly-III related; SPTR: Channel protein, hemolysin III family; TIGRFAM: HylII.


ensembl_gene_id: Turpa_1078
symbol: AFM11727.1
gene_biotype: protein_coding
description:
  PFAM: FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: hch:HCH_04193 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Glycerol-3-phosphate dehydrogenase.


ensembl_gene_id: Turpa_1079
symbol: AFM11728.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1625); InterPro IPR012430; KEGG: mlo:mll2895 hypothetical protein; PFAM: Protein of unknown function DUF1625; SPTR: Mll2895 protein.


ensembl_gene_id: Turpa_1081
symbol: AFM11730.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: MORN repeat variant; KEGG: lic:LIC10562 putative lipoprotein; SPTR: Putative lipoprotein.


ensembl_gene_id: Turpa_1082
symbol: AFM11731.1
gene_biotype: protein_coding
description:
  PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: lic:LIC10563 SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: SenC.


ensembl_gene_id: Turpa_1083
symbol: mqnA
gene_biotype: protein_coding
description:
  Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: Turpa_1084
symbol: AFM11733.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: emi:Emin_0172 putative permease; PFAM: Uncharacterised protein family UPF0118; SPTR: Putative membrane protein.


ensembl_gene_id: Turpa_1085
symbol: AFM11734.1
gene_biotype: protein_coding
description:
  PFAM: Acyltransferase; InterPro IPR002123; KEGG: lic:LIC12563 glycerol-3-phosphate dehydrogenase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Glycerol-3-phosphate dehydrogenase.


ensembl_gene_id: Turpa_1086
symbol: AFM11735.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: lbf:LBF_0732 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative transcriptional regulator, AraC family; putative membrane protein.


ensembl_gene_id: Turpa_1088
symbol: AFM11737.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dal:Dalk_0029 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family.


ensembl_gene_id: Turpa_1089
symbol: AFM11738.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: psn:Pedsa_3588 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase.


ensembl_gene_id: Turpa_1092
symbol: AFM11741.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: lbl:LBL_1614 enoyl-CoA hydratase/carnithine racemase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/carnithine racemase.


ensembl_gene_id: Turpa_1095
symbol: AFM11743.1
gene_biotype: protein_coding
description:
  PFAM: NHL repeat; InterPro IPR001258; KEGG: ngr:NAEGRDRAFT_82333 hypothetical protein; PFAM: NHL repeat; SPTR: Predicted protein.


ensembl_gene_id: Turpa_1100
symbol: AFM11748.1
gene_biotype: protein_coding
description:
  PFAM: Stage II sporulation protein E (SpoIIE); InterPro IPR001932:IPR010822; KEGG: lbf:LBF_0573 TPR repeat-containing protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1104
symbol: AFM11752.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF81; PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: protein of unknown function DUF81; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1106
symbol: AFM11754.1
gene_biotype: protein_coding
description:
  Adenylate/guanylate cyclase with GAF sensor(s); PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR003018:IPR001054; KEGG: lbf:LBF_0606 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; SPTR: Putative adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.


ensembl_gene_id: Turpa_1107
symbol: AFM11755.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Plasmid stabilisation system protein; KEGG: cch:Cag_1322 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1108
symbol: AFM11756.1
gene_biotype: protein_coding
description:
  PFAM: Putative addiction module component; TIGRFAM: putative addiction module component, TIGR02574 family; InterPro IPR013406; KEGG: nit:NAL212_2555 addiction module protein; PFAM: Addiction module component, CHP02574; SPTR: Putative uncharacterized protein; TIGRFAM: Addiction module component, CHP02574.


ensembl_gene_id: Turpa_1109
symbol: AFM11757.1
gene_biotype: protein_coding
description:
  PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: dal:Dalk_4289 peptidase S45 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; SPTR: Peptidase S45 penicillin amidase.


ensembl_gene_id: Turpa_1110
symbol: AFM11758.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: adn:Alide_4386 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted.


ensembl_gene_id: Turpa_1111
symbol: AFM11759.1
gene_biotype: protein_coding
description:
  PFAM: Glycoside hydrolase 97; InterPro IPR019563; KEGG: psn:Pedsa_2572 glycoside hydrolase 97; PFAM: Glycoside hydrolase 97; SPTR: Glycoside hydrolase 97.


ensembl_gene_id: Turpa_1114
symbol: AFM11762.1
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: cyp:PCC8801_0826 GCN5-like N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.


ensembl_gene_id: Turpa_1115
symbol: AFM11763.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; 7TM diverse intracellular signalling; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR006104; KEGG: ter:Tery_2857 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Glycoside hydrolase family 2, carbohydrate-binding; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase.


ensembl_gene_id: Turpa_1116
symbol: AFM11764.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 51; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264:IPR001460; KEGG: lic:LIC10534 penicillin-binding protein 1; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: Penicillin-binding protein 1.


ensembl_gene_id: Turpa_1118
symbol: AFM11766.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: lbl:LBL_2531 AcrR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, AcrR-family.


ensembl_gene_id: Turpa_1119
symbol: AFM11767.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: sab:SAB1271c two-component response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator.


ensembl_gene_id: Turpa_1120
symbol: AFM11768.1
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: cai:Caci_2325 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: tRNA/rRNA methyltransferase (SpoU).


ensembl_gene_id: Turpa_1121
symbol: AFM11769.1
gene_biotype: protein_coding
description:
  PFAM: Thioesterase superfamily; InterPro IPR006683; KEGG: gem:GM21_1367 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein.


ensembl_gene_id: Turpa_1124
symbol: AFM11772.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR006293:IPR018329:IPR014001:IPR001650:IPR002121:IPR0115 45:IPR018982; KEGG: tde:TDE0326 ATP-dependent DNA helicase RecQ; PFAM: RQC domain; DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; [...]


ensembl_gene_id: Turpa_1125
symbol: AFM11773.1
gene_biotype: protein_coding
description:
  PFAM: HPP family; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: ppd:Ppro_1207 HPP family protein+B94; PFAM: HPP; SPTR: HPP family protein+B94.


ensembl_gene_id: Turpa_1126
symbol: AFM11774.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: lbf:LBF_0600 cyclic nucleotide binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Putative cyclic-nucleotide binding protein.


ensembl_gene_id: Turpa_1127
symbol: AFM11775.1
gene_biotype: protein_coding
description:
  PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: kko:Kkor_1363 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase.


ensembl_gene_id: Turpa_1128
symbol: AFM11776.1
gene_biotype: protein_coding
description:
  PFAM: Endonuclease I; COGs: COG2356 Endonuclease I; InterPro IPR007346; KEGG: dat:HRM2_17310 EndA1; PFAM: Endonuclease I; SPTR: EndA1.


ensembl_gene_id: Turpa_1130
symbol: AFM11778.1
gene_biotype: protein_coding
description:
  PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: msv:Mesil_0835 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region; manually curated.


ensembl_gene_id: Turpa_1131
symbol: AFM11779.1
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR003018:IPR008207:IPR003594; KEGG: dno:DNO_0869 two-component sensor kinase; PFAM: GAF; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like; SMART: GAF; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like; SPTR: Two-component sensor kinase.


ensembl_gene_id: Turpa_1132
symbol: AFM11780.1
gene_biotype: protein_coding
description:
  Adenylate/guanylate cyclase with integral membrane sensor; PFAM: Adenylate and Guanylate cyclase catalytic domain; Cache domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR004010:IPR003660; KEGG: sfu:Sfum_2802 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Cache; HAMP linker domain; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase.


ensembl_gene_id: Turpa_1133
symbol: AFM11781.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF2442); InterPro IPR018841; KEGG: mta:Moth_0363 molybdopterin-guanine dinucleotide biosynthesis protein A-like; PFAM: Protein of unknown function DUF2442; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1136
symbol: AFM11784.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Putative transmembrane protein.


ensembl_gene_id: Turpa_1137
symbol: AFM11785.1
gene_biotype: protein_coding
description:
  PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: ppn:Palpr_2541 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein.


ensembl_gene_id: Turpa_1138
symbol: AFM11786.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763:IPR013027:IPR004099; KEGG: drm:Dred_2967 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Rhodanese-like; SMART: Rhodanese-like; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: Turpa_1140
symbol: AFM11788.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF156; PFAM: Uncharacterised BCR, COG1937; InterPro IPR003735; KEGG: lbf:LBF_0823 hypothetical protein; PFAM: Protein of unknown function DUF156; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1141
symbol: AFM11789.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF2892); KEGG: tbd:Tbd_2628 hypothetical protein; SPTR: Membrane protein, putative.


ensembl_gene_id: Turpa_1142
symbol: AFM11790.1
gene_biotype: protein_coding
description:
  PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: lbf:LBF_3190 rhodanese-like sulfurtransferase; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Putative phage shock protein E; putative signal peptide.


ensembl_gene_id: Turpa_1143
symbol: AFM11791.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: hoh:Hoch_4952 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein.


ensembl_gene_id: Turpa_1144
symbol: AFM11792.1
gene_biotype: protein_coding
description:
  Multi-sensor signal transduction histidine kinase; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014:IPR003018:IPR003661:IPR003594:IPR013656:IPR0137 67; KEGG: gme:Gmet_1005 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; GAF; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART [...]


ensembl_gene_id: Turpa_1145
symbol: AFM11793.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: ppd:Ppro_3011 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein.


ensembl_gene_id: Turpa_1146
symbol: AFM11794.1
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR000014:IPR001789:IPR001610:IPR003661:IPR003594:IPR0136 55; KEGG: sus:Acid_4959 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgr [...]


ensembl_gene_id: Turpa_1147
symbol: AFM11795.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterPro IPR000014:IPR001610:IPR003018:IPR003661:IPR003594:IPR0017 89:IPR013767:IPR013655:IPR013656; KEGG: ava:Ava_0198 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; GAF; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1 [...]


ensembl_gene_id: Turpa_1149
symbol: AFM11797.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: aba:Acid345_1778 two component, sigma54 specific, fis family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family.


ensembl_gene_id: Turpa_1150
symbol: AFM11798.1
gene_biotype: protein_coding
description:
  Integral membrane sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgrou [...]


ensembl_gene_id: Turpa_1152
symbol: AFM11800.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpB; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB; COGs: COG1643 HrpA-like helicase; InterPro IPR010225:IPR014001:IPR001650:IPR007502:IPR013689; KEGG: sru:SRU_2747 ATP-dependent helicase HrpB; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: ATP-dependent helicase HrpB; TIGRFAM: RNA helicase, ATP [...]


ensembl_gene_id: Turpa_1154
symbol: AFM11802.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Ion transport protein; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR005821; KEGG: lbf:LBF_1820 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; Ion transport; SMART: Cyclic nucleotide-binding; SPTR: Putative cyclic-nucleotide-gated cation channel; putative membrane protein.


ensembl_gene_id: Turpa_1155
symbol: AFM11803.1
gene_biotype: protein_coding
description:
  PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: lil:LA_1857 ferric uptake regulator; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator; Belongs to the Fur family.


ensembl_gene_id: Turpa_1156
symbol: AFM11804.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1731; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR001509:IPR013549; KEGG: fri:FraEuI1c_3530 NAD-dependent epimerase/dehydratase; PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1157
symbol: AFM11805.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: sse:Ssed_2796 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein.


ensembl_gene_id: Turpa_1159
symbol: AFM11807.1
gene_biotype: protein_coding
description:
  PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: kfl:Kfla_1384 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase.


ensembl_gene_id: Turpa_1160
symbol: AFM11808.1
gene_biotype: protein_coding
description:
  SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; InterPro IPR014044; KEGG: S-layer domain-containing protein; PFAM: SCP-like extracellular; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1162
symbol: AFM11810.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: eli:ELI_06145 pyruvate dehydrogenase complex, E3 component, lipoamidedehydrogenase, putative; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Dihydrolipoyl dehydrogenase [...]


ensembl_gene_id: Turpa_1163
symbol: AFM11811.1
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: dba:Dbac_3153 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Phosphoesterase, PA-phosphatase related.


ensembl_gene_id: Turpa_1167
symbol: AFM11815.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789; KEGG: response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver domain protein (CheY-like).


ensembl_gene_id: Turpa_1168
symbol: AFM11816.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Domain of unknown function (DUF1794); COGs: COG5514 conserved hypothetical protein; KEGG: gpb:HDN1F_03360 hypothetical protein; SPTR: Probable signal peptide protein.


ensembl_gene_id: Turpa_1169
symbol: AFM11817.1
gene_biotype: protein_coding
description:
  YceI family protein; PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: psn:Pedsa_1695 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YCE I like family protein; Belongs to the UPF0312 family.


ensembl_gene_id: Turpa_1170
symbol: AFM11818.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: lbl:LBL_1826 adenylate cyclase-like protein; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate cyclase-related protein.


ensembl_gene_id: Turpa_1171
symbol: AFM11819.1
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR003594:IPR003660:IPR008207; KEGG: pcr:Pcryo_0385 putative CheA signal transduction histidine kinases; PFAM: HAMP linker domain; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: CheA signal transduction histidine kinase.


ensembl_gene_id: Turpa_1175
symbol: AFM11823.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: lbf:LBF_2994 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; SPTR: Acyl-CoA dehydrogenase.


ensembl_gene_id: Turpa_1176
symbol: AFM11824.1
gene_biotype: protein_coding
description:
  PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: gme:Gmet_0677 plasmid stabilization system protein; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system protein.


ensembl_gene_id: Turpa_1179
symbol: AFM11827.1
gene_biotype: protein_coding
description:
  PFAM: Di-haem cytochrome c peroxidase; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: hoh:Hoch_5043 di-heme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: Di-heme cytochrome c peroxidase.


ensembl_gene_id: Turpa_1183
symbol: AFM11831.1
gene_biotype: protein_coding
description:
  PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: cyh:Cyan8802_4292 FHA domain containing protein; PFAM: Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; SPTR: FHA domain containing protein.


ensembl_gene_id: Turpa_1184
symbol: AFM11832.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial protein of unknown function (DUF898); COGs: COG4269 membrane protein; InterPro IPR010295; KEGG: lbf:LBF_3146 hypothetical protein; PFAM: Protein of unknown function DUF898, transmembrane bacterial; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1185
symbol: AFM11833.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: lbf:LBF_3147 zinc dependent protease; PFAM: Peptidase M48, Ste24p; SPTR: Zinc dependent protease.


ensembl_gene_id: Turpa_1186
symbol: AFM11834.1
gene_biotype: protein_coding
description:
  PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: atm:ANT_01270 putative hydrolase; SPTR: Lipolytic enzyme.


ensembl_gene_id: Turpa_1187
symbol: AFM11835.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase with GAF sensor; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR003018; KEGG: lbf:LBF_1284 GGDEF domain-containing response regulator; PFAM: Diguanylate cyclase, predicted; GAF; SMART: Diguanylate cyclase, predicted; GAF; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted.


ensembl_gene_id: Turpa_1188
symbol: AFM11836.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: cyj:Cyan7822_0442 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted.


ensembl_gene_id: Turpa_1190
symbol: AFM11838.1
gene_biotype: protein_coding
description:
  PFAM: MaoC like domain; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: lic:LIC10600 fatty acid synthase subunit beta; PFAM: MaoC-like dehydratase; SPTR: MaoC-like acyl dehydratase.


ensembl_gene_id: Turpa_1191
symbol: AFM11839.1
gene_biotype: protein_coding
description:
  Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR003658:IPR002645; KEGG: lbf:LBF_1688 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: Turpa_1192
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: Turpa_1196
symbol: AFM11844.1
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).


ensembl_gene_id: Turpa_1197
symbol: AFM11845.1
gene_biotype: protein_coding
description:
  Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Turpa_1198
symbol: AFM11846.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Turpa_1199
symbol: AFM11847.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat-containing protein; InterPro IPR019734; KEGG: tet:TTHERM_00585370 TPR Domain containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1200
symbol: AFM11848.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: gau:GAU_0425 putative ABC transporter ATP-binding/permease protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: Putative ABC transporter ATP-binding/permease protein.


ensembl_gene_id: Turpa_1202
symbol: AFM11850.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: lbf:LBF_2231 CAP family transcription factor; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Putative cAMP-binding protein.


ensembl_gene_id: Turpa_1204
symbol: AFM11852.1
gene_biotype: protein_coding
description:
  Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197; KEGG: wch:wcw_0148 putative DNA repair photolyase; PFAM: Radical SAM; SPTR: Putative lyase.


ensembl_gene_id: Turpa_1205
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Turpa_1207
symbol: AFM11855.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Inorganic H+ pyrophosphatase; COGs: COG3808 Inorganic pyrophosphatase; KEGG: V-type H(+)-translocating pyrophosphatase; SPTR: Putative K(+)-stimulated pyrophosphate-energized sodium pump.


ensembl_gene_id: Turpa_1208
symbol: AFM11856.1
gene_biotype: protein_coding
description:
  KR domain protein; InterPro IPR013968; KEGG: bba:Bd1175 nucleoside-diphosphate-sugar epimerase; PFAM: Polyketide synthase, KR; SPTR: Nucleoside-diphosphate-sugar epimerases.


ensembl_gene_id: Turpa_1209
symbol: AFM11857.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase DCC; PFAM: Protein of unknown function, DUF393; COGs: COG3011 conserved hypothetical protein; InterPro IPR007263; KEGG: thiol-disulfide oxidoreductase DCC; PFAM: Putative thiol-disulphide oxidoreductase DCC; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_1210
symbol: AFM11858.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold containing protein; PFAM: Putative lysophospholipase; COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: lbf:LBF_3054 lysophospholipase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative acylglycerol lipase.


ensembl_gene_id: Turpa_1213
symbol: AFM11861.1
gene_biotype: protein_coding
description:
  Peptidase M30, hyicolysin; PFAM: NHL repeat; InterPro IPR019501:IPR001258; KEGG: mba:Mbar_A0416 hypothetical protein; PFAM: Peptidase M30, hyicolysin; NHL repeat; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1214
symbol: AFM11862.1
gene_biotype: protein_coding
description:
  PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: gem:GM21_1324 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; Belongs to the monomeric-type IDH family.


ensembl_gene_id: Turpa_1216
symbol: AFM11864.1
gene_biotype: protein_coding
description:
  Ankyrin; InterPro IPR002110; KEGG: tva:TVAG_297150 ankyrin repeat protein; PFAM: Ankyrin repeat; SPTR: Ankyrin repeat protein, putative.


ensembl_gene_id: Turpa_1220
symbol: AFM11868.1
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR002110; KEGG: sus:Acid_2033 ankyrin; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1221
symbol: AFM11869.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: scl:sce0505 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1222
symbol: AFM11870.1
gene_biotype: protein_coding
description:
  PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: apo:Arcpr_0231 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: SPFH domain / Band 7 family protein.


ensembl_gene_id: Turpa_1223
symbol: AFM11871.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: scl:sce3871 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1225
symbol: AFM11873.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: lil:LA_2265 enoyl-CoA hydratase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase.


ensembl_gene_id: Turpa_1228
symbol: AFM11876.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: ppd:Ppro_2215 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family.


ensembl_gene_id: Turpa_1230
symbol: AFM11878.1
gene_biotype: protein_coding
description:
  PFAM: Stage II sporulation protein E (SpoIIE); InterPro IPR010822; KEGG: lbf:LBF_1767 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_1231
symbol: AFM11879.1
gene_biotype: protein_coding
description:
  KEGG: cyn:Cyan7425_2315 multi-sensor signal transduction histidine kinase; SPTR: Multi-sensor signal transduction histidine kinase.


ensembl_gene_id: Turpa_1233
symbol: AFM11881.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: lbf:LBF_0286 AcrR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative transcriptional regulator, TetR family.


ensembl_gene_id: Turpa_1235
symbol: AFM11883.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: lbf:LBF_1336 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1236
symbol: AFM11884.1
gene_biotype: protein_coding
description:
  PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: ttm:Tthe_2671 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein.


ensembl_gene_id: Turpa_1237
symbol: AFM11885.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2191; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); InterPro IPR019239; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1239
symbol: AFM11887.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: sur:STAUR_2074 C-5 sterol desaturase; PFAM: Fatty acid hydroxylase; SPTR: C-5 sterol desaturase.


ensembl_gene_id: Turpa_1240
symbol: AFM11888.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: ppg:PputGB1_2910 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Membrane protein, putative.


ensembl_gene_id: Turpa_1241
symbol: AFM11889.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Surface antigen; KEGG: cts:Ctha_2120 outer membrane protein/protective antigen OMA87-like protein; SPTR: Outer membrane protein, OMP85 family.


ensembl_gene_id: Turpa_1244
symbol: AFM11892.1
gene_biotype: protein_coding
description:
  Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component; InterPro IPR006153:IPR003148; KEGG: gsu:GSU0261 sodium/hydrogen exchanger family protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Sodium/hydrogen exchanger family protein; TC 2.A.37.1.


ensembl_gene_id: Turpa_1245
symbol: recA
gene_biotype: protein_coding
description:
  Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Turpa_1247
symbol: AFM11895.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: ABC-2 type transporter; KEGG: mma:MM_2397 heme exporter, protein B; SPTR: Heme exporter, protein B.


ensembl_gene_id: Turpa_1248
symbol: AFM11896.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: sth:STH695 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1249
symbol: AFM11897.1
gene_biotype: protein_coding
description:
  PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: lbf:LBF_4042 protein kinase; PFAM: ArgK protein; SPTR: Putative periplasmic kinase.


ensembl_gene_id: Turpa_1250
symbol: AFM11898.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: cao:Celal_4194 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1251
symbol: AFM11899.1
gene_biotype: protein_coding
description:
  PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro IPR002591; KEGG: lbf:LBF_0021 putative lipoprotein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1252
symbol: AFM11900.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: mva:Mvan_2912 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1256
symbol: AFM11904.1
gene_biotype: protein_coding
description:
  PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; InterPro IPR002501; KEGG: tai:Taci_0989 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family.


ensembl_gene_id: Turpa_1257
symbol: AFM11905.1
gene_biotype: protein_coding
description:
  Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Turpa_1258
symbol: rpmB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L28P; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: lbl:LBL_1427 50S ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: Turpa_1259
symbol: AFM11907.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2191; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); InterPro IPR019239; KEGG: gur:Gura_3864 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1260
symbol: AFM11908.1
gene_biotype: protein_coding
description:
  PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: avn:Avin_46630 PIN-domain protein; PFAM: PilT protein, N-terminal; SPTR: PIN-domain protein.


ensembl_gene_id: Turpa_1261
symbol: AFM11909.1
gene_biotype: protein_coding
description:
  Orn/DAP/Arg decarboxylase 2; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: tye:THEYE_A1762 ornithine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: Turpa_1263
symbol: AFM11911.1
gene_biotype: protein_coding
description:
  Transposase IS200-family protein; PFAM: Transposase IS200 like; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: cyj:Cyan7822_2281 transposase IS200-family protein; PFAM: Transposase IS200-like; SPTR: Transposase IS200-family protein.


ensembl_gene_id: Turpa_1264
symbol: AFM11912.1
gene_biotype: protein_coding
description:
  AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: sur:STAUR_6357 ATPase; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family.


ensembl_gene_id: Turpa_1265
symbol: AFM11913.1
gene_biotype: protein_coding
description:
  Protein serine/threonine phosphatase with extracellular sensor; PFAM: Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932:IPR003660:IPR010822; KEGG: lbf:LBF_1715 serine phosphatase RsbU; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: Protein phosphatase 2C-related; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1266
symbol: AFM11914.1
gene_biotype: protein_coding
description:
  Integral membrane sensor hybrid histidine kinase; PFAM: 7TM diverse intracellular signalling; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003661:IPR001789:IPR001932:IPR011623:IPR003594:IPR0108 22; KEGG: lbf:LBF_0920 two component response regulator sensor histidine kinase/response regulator subunits; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Div [...]


ensembl_gene_id: Turpa_1267
symbol: AFM11915.1
gene_biotype: protein_coding
description:
  PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mch:Mchl_5109 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Turpa_1268
symbol: AFM11916.1
gene_biotype: protein_coding
description:
  PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: msl:Msil_2350 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Turpa_1270
symbol: AFM11918.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: Turpa_1272
symbol: AFM11920.1
gene_biotype: protein_coding
description:
  PFAM: Toluene tolerance, Ttg2; COGs: COG2854 ABC-type transport system involved in resistance to organic solvents auxiliary component; InterPro IPR008869; KEGG: toluene tolerance family protein; PFAM: Toluene tolerance; SPTR: Toluene tolerance family protein.


ensembl_gene_id: Turpa_1273
symbol: AFM11921.1
gene_biotype: protein_coding
description:
  PFAM: VacJ like lipoprotein; COGs: COG2853 Surface lipoprotein; InterPro IPR007428; KEGG: cco:CCC13826_2202 ABC transporter ATPase; PFAM: VacJ-like lipoprotein; SPTR: Abc-type transporter, ATPase component.


ensembl_gene_id: Turpa_1274
symbol: AFM11922.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, NifA subfamily, Fis Family; PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR003018:IPR003593:IPR002078:IPR002197; KEGG: lbf:LBF_0547 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: GAF; ATPase, AAA+ type, core; SPTR: Putative two-component sensor protein.


ensembl_gene_id: Turpa_1278
symbol: AFM11926.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; KEGG: rso:RSc0127 putative hemagglutinin-related protein; SPTR: Hemagglutinin-related protein.


ensembl_gene_id: Turpa_1280
symbol: AFM11928.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733:IPR000728:IPR010918; KEGG: ral:Rumal_0260 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase.


ensembl_gene_id: Turpa_1281
symbol: AFM11929.1
gene_biotype: protein_coding
description:
  PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179; KEGG: psl:Psta_1971 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; SPTR: Peptidyl-prolyl cis-trans isomerase.


ensembl_gene_id: Turpa_1282
symbol: AFM11930.1
gene_biotype: protein_coding
description:
  Sulphatase-modifying factor protein; PFAM: Formylglycine-generating sulfatase enzyme; InterPro IPR005532; KEGG: Sulphatase-modifying factor protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1284
symbol: AFM11932.1
gene_biotype: protein_coding
description:
  PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: bts:Btus_2130 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Integrase family protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: Turpa_1285
symbol: AFM11933.1
gene_biotype: protein_coding
description:
  PFAM: XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR014308:IPR003777; KEGG: bba:Bd2635 putative xanthine dehydrogenase accessory factor; PFAM: XdhC- CoxI; SPTR: Putative xanthine dehydrogenase accessory factor; TIGRFAM: Xanthine dehydrogenase accessory protein XdhC.


ensembl_gene_id: Turpa_1286
symbol: AFM11934.1
gene_biotype: protein_coding
description:
  PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; COGs: COG4631 Xanthine dehydrogenase molybdopterin-binding subunit B; InterPro IPR014309:IPR000674:IPR008274; KEGG: bba:Bd2634 xanthine dehydrogenase, C-terminal subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; SPTR: Putative xanthine dehydrogenase large subunit; TIGRFAM: Xanthine dehydrogenase, molybdopterin binding subunit.


ensembl_gene_id: Turpa_1287
symbol: AFM11935.1
gene_biotype: protein_coding
description:
  PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; [2Fe-2S] binding domain; TIGRFAM: xanthine dehydrogenase, small subunit; COGs: COG4630 Xanthine dehydrogenase iron-sulfur cluster and FAD-binding subunit A; InterPro IPR002888:IPR002346:IPR005107; KEGG: bba:Bd2633 xanthine dehydrogenase; PFAM: Molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding; CO dehydrogenase flavoprotein, C-terminal; SPTR: Xanthine dehydrogenase.


ensembl_gene_id: Turpa_1289
symbol: AFM11937.1
gene_biotype: protein_coding
description:
  PFAM: Cytochrome c; Protein of unknown function (DUF989); COGs: COG3748 membrane protein; InterPro IPR010389; KEGG: mms:mma_0514 hypothetical protein; PFAM: Protein of unknown function DUF989; SPTR: Uncharacterized conserved protein.


ensembl_gene_id: Turpa_1291
symbol: AFM11939.1
gene_biotype: protein_coding
description:
  PilT protein domain protein; PFAM: PIN domain; COGs: COG5573 nucleic-acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: swo:Swol_1570 PilT-like protein; PFAM: PilT protein, N-terminal; SPTR: PilT-like protein.


ensembl_gene_id: Turpa_1292
symbol: AFM11940.1
gene_biotype: protein_coding
description:
  Allantoinase; PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR017593:IPR006680; KEGG: hch:HCH_01096 dihydroorotase-like protein; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase and related cyclic amidoHydrolase; TIGRFAM: Allantoinase.


ensembl_gene_id: Turpa_1293
symbol: AFM11941.1
gene_biotype: protein_coding
description:
  Protein of unknown function zinc metallopeptidase; PFAM: Putative neutral zinc metallopeptidase; COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: pol:Bpro_1515 protein of unknown function, zinc metallopeptidase putative; PFAM: Protein of unknown function, zinc metallopeptidase putative; SPTR: Uncharacterized protein ypfJ.


ensembl_gene_id: Turpa_1294
symbol: AFM11942.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidase, hydantoinase/carbamoylase family; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010158:IPR002933:IPR011650; KEGG: msv:Mesil_1784 amidase, hydantoinase/carbamoylase family; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Amidase, hydantoinase/carbamoylase family; TIGRFAM: Amidase, hydantoinase/carbamoylase.


ensembl_gene_id: Turpa_1295
symbol: AFM11943.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2191; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); InterPro IPR019239; PFAM: Protein of unknown function DUF2191.


ensembl_gene_id: Turpa_1297
symbol: AFM11945.1
gene_biotype: protein_coding
description:
  PFAM: Saccharopine dehydrogenase; COGs: COG3268 conserved hypothetical protein; InterPro IPR005097; KEGG: sal:Sala_0761 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase; SPTR: Saccharopine dehydrogenase.


ensembl_gene_id: Turpa_1298
symbol: AFM11946.1
gene_biotype: protein_coding
description:
  Amidase, hydantoinase/carbamoylase family; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010158:IPR002933:IPR011650; KEGG: msv:Mesil_1787 amidase, hydantoinase/carbamoylase family; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Amidase, hydantoinase/carbamoylase family; TIGRFAM: Amidase, hydantoinase/carbamoylase.


ensembl_gene_id: Turpa_1299
symbol: AFM11947.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF336); COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: lic:LIC10294 GlcG; PFAM: Protein of unknown function DUF336; SPTR: GlcG.


ensembl_gene_id: Turpa_1301
symbol: AFM11949.1
gene_biotype: protein_coding
description:
  PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: azc:AZC_2711 glycerol uptake facilitator protein; PFAM: Major intrinsic protein; SPTR: Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: Turpa_1303
symbol: AFM11951.1
gene_biotype: protein_coding
description:
  PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: nde:NIDE1755 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Predicted protein.


ensembl_gene_id: Turpa_1304
symbol: AFM11952.1
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: cts:Ctha_0024 phosphoesterase PA-phosphatase-like protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1305
symbol: AFM11953.1
gene_biotype: protein_coding
description:
  WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR019781; KEGG: cni:Calni_0847 WD40 repeat, subgroup; PFAM: WD40 repeat, subgroup; SPTR: WD40 repeat, subgroup.


ensembl_gene_id: Turpa_1307
symbol: AFM11955.1
gene_biotype: protein_coding
description:
  Potassium/proton antiporter, CPA1 family; PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153:IPR006037; KEGG: rci:RRC459 putative Na(+)/H(+) antiporter; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; SPTR: Putative Na(+)/H(+) antiporter; TC 2.A.36.


ensembl_gene_id: Turpa_1310
symbol: AFM11958.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: START domain; KEGG: vsp:VS_II1422 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1315
symbol: AFM11963.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF2505); InterPro IPR019639; KEGG: lbl:LBL_4245 hypothetical protein; PFAM: Protein of unknown function DUF2505; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1317
symbol: AFM11965.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative ABC transporter, permease protein.


ensembl_gene_id: Turpa_1318
symbol: AFM11966.1
gene_biotype: protein_coding
description:
  PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: oca:OCAR_4577 lipoprotein-releasing system ATP-binding protein LolD; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein-releasing system ATP-binding protein LolD.


ensembl_gene_id: Turpa_1319
symbol: AFM11967.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: lbl:LBL_1265 receiver component of a two-component response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Receiver component of a two-component response regulator.


ensembl_gene_id: Turpa_1320
symbol: AFM11968.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: gur:Gura_2017 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Integral membrane sensor signal transduction histidine kinase.


ensembl_gene_id: Turpa_1324
symbol: AFM11972.1
gene_biotype: protein_coding
description:
  PFAM: Malate synthase; TIGRFAM: malate synthase A; COGs: COG2225 Malate synthase; InterPro IPR006252:IPR011076; KEGG: hse:Hsero_3029 malate synthase; PFAM: Malate synthase-like, core; SPTR: Malate synthase; TIGRFAM: Malate synthase A; Belongs to the malate synthase family.


ensembl_gene_id: Turpa_1325
symbol: AFM11973.1
gene_biotype: protein_coding
description:
  PFAM: DTW domain; COGs: COG3148 conserved hypothetical protein; InterPro IPR005636; KEGG: DTW domain containing protein; PFAM: DTW; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1326
symbol: AFM11974.1
gene_biotype: protein_coding
description:
  Sulfate transporter; InterPro IPR011547; KEGG: tel:tll1357 hypothetical protein; PFAM: Sulphate transporter; SPTR: Tll1357 protein; manually curated.


ensembl_gene_id: Turpa_1327
symbol: AFM11975.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; 7TM diverse intracellular signalling; 7TMR-DISM extracellular 2; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR011622:IPR011623; KEGG: lil:LA_3843 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase.


ensembl_gene_id: Turpa_1328
symbol: AFM11976.1
gene_biotype: protein_coding
description:
  Hydroxyisourate hydrolase; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; COGs: COG2351 Transthyretin-like protein; InterPro IPR000895:IPR014306; KEGG: sur:STAUR_1035 transthyretin family protein; PFAM: Transthyretin/hydroxyisourate hydrolase; SMART: Transthyretin/hydroxyisourate hydrolase; SPTR: 5-hydroxyisourate hydrolase; TIGRFAM: Hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: Turpa_1330
symbol: AFM11978.1
gene_biotype: protein_coding
description:
  PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase; COGs: COG3195 conserved hypothetical protein; InterPro IPR017595:IPR018020; KEGG: hch:HCH_01094 putative OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; SPTR: Putative uncharacterized protein; TIGRFAM: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2.


ensembl_gene_id: Turpa_1332
symbol: AFM11980.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF861 cupin_3; PFAM: Cupin domain; COGs: COG3257 Uncharacterized protein possibly involved in glyoxylate utilization; InterPro IPR008579:IPR013096; KEGG: hch:HCH_01149 hypothetical protein; PFAM: Protein of unknown function DUF861, cupin-3; Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein.


ensembl_gene_id: Turpa_1334
symbol: AFM11982.1
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; PFAM: GCN5-related N-acetyltransferase.


ensembl_gene_id: Turpa_1338
symbol: AFM11986.1
gene_biotype: protein_coding
description:
  RDD domain containing protein; PFAM: RDD family; InterPro IPR010432; KEGG: swp:swp_4308 membrane protein; PFAM: RDD; SPTR: RDD domain containing protein.


ensembl_gene_id: Turpa_1341
symbol: AFM11989.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF3680); KEGG: sus:Acid_6542 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1342
symbol: AFM11990.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF497); COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: lbf:LBF_2952 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_1345
symbol: AFM11993.1
gene_biotype: protein_coding
description:
  PFAM: PIN domain; COGs: COG5573 nucleic-acid-binding protein contains PIN domain; KEGG: cki:Calkr_1386 PilT protein domain-containing protein; SPTR: PilT protein domain protein.


ensembl_gene_id: Turpa_1348
symbol: AFM11996.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function, DUF400; KEGG: dol:Dole_1197 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1349
symbol: AFM11997.1
gene_biotype: protein_coding
description:
  AAA ATPase; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Turpa_1350
symbol: AFM11998.1
gene_biotype: protein_coding
description:
  TIGRFAM: caa(3)-type oxidase, subunit IV; InterPro IPR011743; KEGG: scl:sce7595 putative cytochrome c oxidase subunit IV; SPTR: Cytochrome oxidase subunit IV-like protein; TIGRFAM: Caa(3)-type oxidase, subunit IV.


ensembl_gene_id: Turpa_1351
symbol: AFM11999.1
gene_biotype: protein_coding
description:
  PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: lbl:LBL_0278 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III.


ensembl_gene_id: Turpa_1352
symbol: AFM12000.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: Turpa_1353
symbol: AFM12001.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: Turpa_1354
symbol: AFM12002.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: afw:Anae109_0847 SCO1/SenC family protein; SPTR: SCO1/SenC family protein.


ensembl_gene_id: Turpa_1355
symbol: AFM12003.1
gene_biotype: protein_coding
description:
  COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073; KEGG: dps:DP0453 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1358
symbol: AFM12006.1
gene_biotype: protein_coding
description:
  PFAM: DSBA-like thioredoxin domain; COGs: COG1651 Protein-disulfide isomerase; InterPro IPR001853; KEGG: lbj:LBJ_1875 oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: Oxidoreductase.


ensembl_gene_id: Turpa_1359
symbol: AFM12007.1
gene_biotype: protein_coding
description:
  Beta-lactamase domain-containing protein; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: rmr:Rmar_0205 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein.


ensembl_gene_id: Turpa_1360
symbol: AFM12008.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: cai:Caci_7935 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: 3-hydroxybutyryl-CoA dehydratase-like protein.


ensembl_gene_id: Turpa_1361
symbol: AFM12009.1
gene_biotype: protein_coding
description:
  Pyruvate carboxyltransferase; PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: rva:Rvan_0703 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase; SPTR: Pyruvate carboxyltransferase.


ensembl_gene_id: Turpa_1362
symbol: AFM12010.1
gene_biotype: protein_coding
description:
  Zinc-dependent hydrolase; PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: lbl:LBL_0580 zinc-dependant hydrolase; SPTR: Zinc-dependant hydrolase.


ensembl_gene_id: Turpa_1364
symbol: AFM12012.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR014284:IPR007627; KEGG: bvu:BVU_0627 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70.


ensembl_gene_id: Turpa_1365
symbol: AFM12013.1
gene_biotype: protein_coding
description:
  Ribosomal RNA methyltransferase RrmJ/FtsJ; PFAM: FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; COGs: COG1189 rRNA methylase; InterPro IPR002942:IPR002877; KEGG: amu:Amuc_1825 hemolysin A; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4; SPTR: Hemolysin A.


ensembl_gene_id: Turpa_1366
symbol: AFM12014.1
gene_biotype: protein_coding
description:
  Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: mmb:Mmol_0605 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Turpa_1367
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Turpa_1368
symbol: AFM12016.1
gene_biotype: protein_coding
description:
  PFAM: START domain; InterPro IPR002913; KEGG: hypothetical protein; PFAM: Lipid-binding START; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1369
symbol: AFM12017.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: pmy:Pmen_3280 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, alpha/beta fold family, putative.


ensembl_gene_id: Turpa_1371
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: Turpa_1375
symbol: AFM12023.1
gene_biotype: protein_coding
description:
  PFAM: Toluene tolerance, Ttg2; COGs: COG2854 ABC-type transport system involved in resistance to organic solvents auxiliary component; InterPro IPR008869; KEGG: rmr:Rmar_2693 toluene tolerance family protein; PFAM: Toluene tolerance; SPTR: Toluene tolerance family protein.


ensembl_gene_id: Turpa_1376
symbol: AFM12024.1
gene_biotype: protein_coding
description:
  PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: gur:Gura_1042 outer membrane efflux protein; SPTR: Outer membrane efflux protein.


ensembl_gene_id: Turpa_1377
symbol: AFM12025.1
gene_biotype: protein_coding
description:
  Hypothetical protein; InterPro IPR019734; KEGG: lic:LIC10038 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1378
symbol: AFM12026.1
gene_biotype: protein_coding
description:
  L-lysine 2,3-aminomutase; PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR003739:IPR007197; KEGG: epy:EpC_04800 hypothetical protein; PFAM: Radical SAM; SPTR: Conserved uncharacterized protein; TIGRFAM: Protein of unknown function DUF160.


ensembl_gene_id: Turpa_1379
symbol: AFM12027.1
gene_biotype: protein_coding
description:
  PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type; InterPro IPR000223:IPR019759; KEGG: tjr:TherJR_2042 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Putative signal peptidase; TIGRFAM: Peptidase S26A, signal peptidase I.


ensembl_gene_id: Turpa_1380
symbol: AFM12028.1
gene_biotype: protein_coding
description:
  PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: pca:Pcar_0066 alpha-beta hydrolase family esterase; PFAM: Patatin; SPTR: Predicted esterase of the alpha-beta hydrolase superfamily.


ensembl_gene_id: Turpa_1381
symbol: AFM12029.1
gene_biotype: protein_coding
description:
  Xylene monooxygenase electron transfer component; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR001041:IPR008333:IPR001433; KEGG: hdn:Hden_0734 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin; SPTR: Oxidoreductase FAD/NAD(P)-binding domain protein.


ensembl_gene_id: Turpa_1382
symbol: AFM12030.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF151; PFAM: Uncharacterised ACR, COG1259; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: brm:Bmur_0021 hypothetical protein; PFAM: Protein of unknown function DUF151; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1383
symbol: AFM12031.1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: Turpa_1384
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Turpa_1388
symbol: AFM12036.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: lbf:LBF_0897 two component response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative two-component response regulator.


ensembl_gene_id: Turpa_1389
symbol: AFM12037.1
gene_biotype: protein_coding
description:
  PFAM: START domain; InterPro IPR002913; KEGG: gpb:HDN1F_18780 hypothetical protein; PFAM: Lipid-binding START; SMART: Lipid-binding START; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1390
symbol: AFM12038.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF3108); KEGG: ran:Riean_0799 ATP-dependent exodnase (exonuclease v) alpha subunit - helicase superfamily I member; SPTR: ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member.


ensembl_gene_id: Turpa_1391
symbol: AFM12039.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; Sensors of blue-light using FAD; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR007024; KEGG: ngr:NAEGRDRAFT_70440 BLUF domain-containing soluble adenylate/guanylate cyclase; PFAM: BLUF; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Beta subunit of photoactivated adenylyl cyclase.


ensembl_gene_id: Turpa_1392
symbol: AFM12040.1
gene_biotype: protein_coding
description:
  Sulfate transporter; InterPro IPR011547; KEGG: psu:Psesu_0568 sulphate transporter; PFAM: Sulphate transporter; SPTR: Sulphate transporter.


ensembl_gene_id: Turpa_1394
symbol: AFM12042.1
gene_biotype: protein_coding
description:
  PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR020013:IPR001444:IPR011491:IPR010930; KEGG: lic:LIC11188 flagellar hook protein FlgE; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G.


ensembl_gene_id: Turpa_1395
symbol: AFM12043.1
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: Turpa_1396
symbol: AFM12044.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: tcr:507957.179 mucin-associated surface protein (MASP); SPTR: Mucin-associated surface protein (MASP), putative.


ensembl_gene_id: Turpa_1397
symbol: AFM12045.1
gene_biotype: protein_coding
description:
  PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR006225:IPR006145; KEGG: dak:DaAHT2_0153 pseudouridine synthase, RluA family; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Turpa_1398
symbol: AFM12046.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial SH3 domain; InterPro IPR003646:IPR013247; KEGG: SH3 type 3 domain protein; PFAM: SH3, type 3; SMART: Bacterial SH3-like region.


ensembl_gene_id: Turpa_1399
symbol: AFM12047.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase Rsu; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR000748:IPR006145; KEGG: mrd:Mrad2831_0069 RNA-binding S4 domain-containing protein; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Turpa_1400
symbol: AFM12048.1
gene_biotype: protein_coding
description:
  Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: Turpa_1401
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Turpa_1402
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: Turpa_1403
symbol: rpsU
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: lbf:LBF_1512 30S ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: Turpa_1404
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Turpa_1405
symbol: AFM12053.1
gene_biotype: protein_coding
description:
  PFAM: Nucleotidyl transferase; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835; KEGG: pph:Ppha_2093 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: Nucleotidyl transferase.


ensembl_gene_id: Turpa_1406
symbol: AFM12054.1
gene_biotype: protein_coding
description:
  Polynucleotide adenylyltransferase region; PFAM: Poly A polymerase head domain; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646; KEGG: afw:Anae109_2353 tRNA cytidylyltransferase; PFAM: Polynucleotide adenylyltransferase region; SPTR: Putative uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: Turpa_1407
symbol: AFM12055.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF374); COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: lbf:LBF_3097 hypothetical protein; PFAM: Protein of unknown function DUF374; SPTR: Conserved domain protein.


ensembl_gene_id: Turpa_1408
symbol: dcd
gene_biotype: protein_coding
description:
  dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.


ensembl_gene_id: Turpa_1409
symbol: AFM12057.1
gene_biotype: protein_coding
description:
  ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Turpa_1410
symbol: AFM12058.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bba:Bd2163 sugar transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: General substrate transporter:Major facilitator superfamily MFS_1.


ensembl_gene_id: Turpa_1412
symbol: AFM12060.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: lbf:LBF_2232 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl coenzyme A dehydrogenase.


ensembl_gene_id: Turpa_1414
symbol: AFM12062.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dal:Dalk_2812 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2.


ensembl_gene_id: Turpa_1415
symbol: AFM12063.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Turpa_1416
symbol: AFM12064.1
gene_biotype: protein_coding
description:
  PFAM: CheW-like domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: aoe:Clos_1192 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: CheW protein.


ensembl_gene_id: Turpa_1420
symbol: rpsI
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein S9/S16; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: ooe:OEOE_0629 SSU ribosomal protein S9P; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: Turpa_1421
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Turpa_1422
symbol: AFM12070.1
gene_biotype: protein_coding
description:
  PFAM: Ion transport protein; InterPro IPR005821; KEGG: dde:Dde_3005 potassium channel protein; PFAM: Ion transport; SPTR: Potassium channel protein.


ensembl_gene_id: Turpa_1424
symbol: AFM12072.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF497); COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: lbf:LBF_2952 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1427
symbol: AFM12075.1
gene_biotype: protein_coding
description:
  Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: pca:Pcar_0358 HSP20-like molecular chaperone; PFAM: Heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Turpa_1428
symbol: AFM12076.1
gene_biotype: protein_coding
description:
  Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: dak:DaAHT2_0431 heat shock protein HSP20; PFAM: Heat shock protein Hsp20; SPTR: Putative low molecular weight heat shock protein; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: Turpa_1429
symbol: AFM12077.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF1295); COGs: COG3752 membrane protein; InterPro IPR010721; KEGG: art:Arth_0946 hypothetical protein; PFAM: Protein of unknown function DUF1295; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1430
symbol: AFM12078.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF159; PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: lbf:LBF_2897 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: Putative uncharacterized protein; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: Turpa_1432
symbol: AFM12080.1
gene_biotype: protein_coding
description:
  PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123:IPR004552; KEGG: glo:Glov_3412 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: Turpa_1433
symbol: AFM12081.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2064; PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: drt:Dret_2120 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1434
symbol: AFM12082.1
gene_biotype: protein_coding
description:
  L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: lbf:LBF_2808 acyl-CoA transferases/carnitine dehydratase; PFAM: CoA-transferase family III; SPTR: Acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.


ensembl_gene_id: Turpa_1435
symbol: AFM12083.1
gene_biotype: protein_coding
description:
  PFAM: MaoC like domain; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: lic:LIC13280 MaoC family protein; PFAM: MaoC-like dehydratase; SPTR: MaoC-like acyl dehydratase.


ensembl_gene_id: Turpa_1437
symbol: AFM12085.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: lic:LIC11110 histidine kinase response regulator hybrid protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component hybrid sensor and regulator.


ensembl_gene_id: Turpa_1438
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Turpa_1439
symbol: AFM12087.1
gene_biotype: protein_coding
description:
  ATPase AAA-2 domain protein; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR003593:IPR004176:IPR003959:IPR001943:IPR013093:IPR0194 89; KEGG: lbf:LBF_2494 ATP-dependent Clp protease; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: A [...]


ensembl_gene_id: Turpa_1441
symbol: AFM12089.1
gene_biotype: protein_coding
description:
  PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036; KEGG: lbf:LBF_3033 cation transporter; PFAM: Acriflavin resistance protein; SPTR: Putative cation efflux system protein; putative membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: Turpa_1443
symbol: AFM12091.1
gene_biotype: protein_coding
description:
  PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: sur:STAUR_4264 endonuclease/exonuclease/phosphatase domain-containing protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase domain protein.


ensembl_gene_id: Turpa_1445
symbol: AFM12093.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; PDZ domain (Also known as DHR or GLGF); COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR000866; KEGG: fsu:Fisuc_0103 redoxin domain protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: PDZ/thioredoxin domain protein.


ensembl_gene_id: Turpa_1447
symbol: AFM12095.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; COGs: COG4106 Trans-aconitate methyltransferase; InterPro IPR013216; KEGG: ant:Arnit_2713 type 11 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; manually curated.


ensembl_gene_id: Turpa_1448
symbol: rpmH
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: chl:Chy400_0126 50S ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: Turpa_1449
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Turpa_1450
symbol: AFM12098.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with GAF sensor; PFAM: EAL domain; GAF domain; GGDEF domain; COGs: COG2200 FOG: EAL domain; InterPro IPR003018:IPR000160:IPR001633; KEGG: bse:Bsel_0666 GAF sensor-containing diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; GAF; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; GAF; Diguanylate cyclase, predicted; SPTR: Putative diguanylate cyclase/phosphodiesterase (GGDEF & EALdomains) with PAS/PAC sensor.


ensembl_gene_id: Turpa_1451
symbol: AFM12099.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF81; PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: das:Daes_2568 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1453
symbol: AFM12101.1
gene_biotype: protein_coding
description:
  PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG4889 helicase; InterPro IPR014001:IPR001650:IPR006935; KEGG: hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1454
symbol: AFM12102.1
gene_biotype: protein_coding
description:
  PFAM: Antibiotic biosynthesis monooxygenase; COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR007138; KEGG: svo:SVI_1137 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1455
symbol: AFM12103.1
gene_biotype: protein_coding
description:
  UPF0161 protein yidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Turpa_1456
symbol: AFM12104.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF418); COGs: COG2311 membrane protein; InterPro IPR007299:IPR007349; KEGG: cwo:Cwoe_0252 protein of unknown function DUF405; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1457
symbol: AFM12105.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: dfe:Dfer_1175 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1.


ensembl_gene_id: Turpa_1458
symbol: AFM12106.1
gene_biotype: protein_coding
description:
  InterPro IPR004360; KEGG: sen:SACE_1429 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: Turpa_1459
symbol: AFM12107.1
gene_biotype: protein_coding
description:
  SpoVT/AbrB domain-containing protein; PFAM: SpoVT / AbrB like domain; InterPro IPR007159; KEGG: lic:LIC12659 putative virulence-associated protein; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Putative virulence-associated protein.


ensembl_gene_id: Turpa_1461
symbol: AFM12109.1
gene_biotype: protein_coding
description:
  InterPro IPR000073; KEGG: lic:LIC10468 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase of the alpha/beta superfamily.


ensembl_gene_id: Turpa_1462
symbol: AFM12110.1
gene_biotype: protein_coding
description:
  PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006225:IPR002942:IPR006145; KEGG: sli:Slin_2869 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD.


ensembl_gene_id: Turpa_1463
symbol: AFM12111.1
gene_biotype: protein_coding
description:
  PFAM: HicB family; InterPro IPR008651; KEGG: gbm:Gbem_3668 HicB family protein; SPTR: HicB family protein.


ensembl_gene_id: Turpa_1464
symbol: AFM12112.1
gene_biotype: protein_coding
description:
  PFAM: YcfA-like protein; InterPro IPR012933; KEGG: dol:Dole_0442 hypothetical protein; PFAM: YcfA-like; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_1466
symbol: AFM12114.1
gene_biotype: protein_coding
description:
  PFAM: Nucleotidyltransferase domain; KEGG: ant:Arnit_2904 DNA polymerase beta domain-containing protein region; SPTR: DNA polymerase beta domain protein region.


ensembl_gene_id: Turpa_1467
symbol: AFM12115.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF86; InterPro IPR008201; KEGG: ant:Arnit_2903 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1474
symbol: AFM12122.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: rmr:Rmar_2159 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1475
symbol: AFM12123.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: dal:Dalk_2725 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_1477
symbol: AFM12125.1
gene_biotype: protein_coding
description:
  PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: lbl:LBL_4099 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase.


ensembl_gene_id: Turpa_1479
symbol: AFM12127.1
gene_biotype: protein_coding
description:
  NIL domain-containing protein; PFAM: NIL domain; InterPro IPR018449; KEGG: deh:cbdb_A871 iron-sulfur cluster-binding protein; PFAM: NIL domain; SPTR: Iron-sulfur cluster-binding protein.


ensembl_gene_id: Turpa_1483
symbol: AFM12131.1
gene_biotype: protein_coding
description:
  PFAM: Stage II sporulation protein E (SpoIIE); InterPro IPR001932:IPR010822; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Putative histidine kinase sensor protein; putative membrane protein.


ensembl_gene_id: Turpa_1485
symbol: AFM12133.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: lbl:LBL_2416 cAMP-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: cAMP-binding protein.


ensembl_gene_id: Turpa_1487
symbol: AFM12135.1
gene_biotype: protein_coding
description:
  PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: sus:Acid_4783 amino acid permease-associated region; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease-associated region; manually curated.


ensembl_gene_id: Turpa_1488
symbol: AFM12136.1
gene_biotype: protein_coding
description:
  PFAM: Small Multidrug Resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: fjo:Fjoh_3295 small multidrug resistance protein; PFAM: Small multidrug resistance protein; SPTR: Small multidrug resistance protein.


ensembl_gene_id: Turpa_1497
symbol: AFM12145.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1863; PFAM: MTH538 TIR-like domain (DUF1863); InterPro IPR015032; KEGG: cth:Cthe_2456 nuclease; PFAM: MTH538 TIR-like domain; SPTR: Nuclease.


ensembl_gene_id: Turpa_1498
symbol: AFM12146.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: shg:Sph21_0534 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Calcineurin-like phosphoesterase.


ensembl_gene_id: Turpa_1499
symbol: AFM12147.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Curli production assembly/transport component CsgG; KEGG: emi:Emin_1501 hypothetical protein.


ensembl_gene_id: Turpa_1500
symbol: AFM12148.1
gene_biotype: protein_coding
description:
  SNF2-related protein; PFAM: Helicase conserved C-terminal domain; Bacterial SNF2 helicase associated; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001:IPR001650:IPR007527:IPR000330; KEGG: rba:RB8 helicase; PFAM: SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Helicase.


ensembl_gene_id: Turpa_1501
symbol: AFM12149.1
gene_biotype: protein_coding
description:
  PFAM: PemK-like protein; KEGG: swi:Swit_4881 transcriptional modulator of MazE/toxin, MazF; SPTR: Transcriptional modulator of MazE/toxin, MazF.


ensembl_gene_id: Turpa_1502
symbol: AFM12150.1
gene_biotype: protein_coding
description:
  SpoVT/AbrB domain-containing protein; PFAM: SpoVT / AbrB like domain; InterPro IPR007159; PFAM: Transcription regulator AbrB/SpoV, predicted.


ensembl_gene_id: Turpa_1503
symbol: AFM12151.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, AF_0612 family; KEGG: vdi:Vdis_0276 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1504
symbol: AFM12152.1
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: gem:GM21_2023 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1505
symbol: AFM12153.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bch:Bcen2424_6824 YadA domain-containing protein; SPTR: YadA C-terminal domain protein.


ensembl_gene_id: Turpa_1514
symbol: AFM12162.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF497); InterPro IPR007460; KEGG: cyh:Cyan8802_3951 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1516
symbol: AFM12164.1
gene_biotype: protein_coding
description:
  PFAM: Putative addiction module component; TIGRFAM: putative addiction module component, TIGR02574 family; InterPro IPR013406; PFAM: Addiction module component, CHP02574.


ensembl_gene_id: Turpa_1518
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: Turpa_1519
symbol: AFM12167.1
gene_biotype: protein_coding
description:
  COGs: COG0625 Glutathione S-transferase; InterPro IPR004045; KEGG: lbf:LBF_2014 glutathione transferase; PFAM: Glutathione S-transferase, N-terminal; SPTR: Putative glutathione S-transferase related protein.


ensembl_gene_id: Turpa_1520
symbol: AFM12168.1
gene_biotype: protein_coding
description:
  Transporter, CPA2 family; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR003148; KEGG: sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Sodium/hydrogen exchanger; TC 2.A.37; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Turpa_1521
symbol: AFM12169.1
gene_biotype: protein_coding
description:
  PFAM: Ion transport protein; InterPro IPR005821; KEGG: lbf:LBF_1820 cyclic nucleotide-binding protein; PFAM: Ion transport; SPTR: Putative cyclic-nucleotide-gated cation channel; putative membrane protein.


ensembl_gene_id: Turpa_1522
symbol: AFM12170.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: sta:STHERM_c06300 hypothetical protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Putative transcriptional regulator, Crp/Fnr family.


ensembl_gene_id: Turpa_1523
symbol: AFM12171.1
gene_biotype: protein_coding
description:
  PFAM: SNARE associated Golgi protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: lbl:LBL_1561 DedA-related protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE-like domain protein.


ensembl_gene_id: Turpa_1527
symbol: AFM12175.1
gene_biotype: protein_coding
description:
  PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: hne:HNE_0461 aquaporin Z; PFAM: Major intrinsic protein; SPTR: Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: Turpa_1529
symbol: AFM12177.1
gene_biotype: protein_coding
description:
  PFAM: Hsp33 protein; COGs: COG1281 Disulfide bond chaperones of the HSP33 family; InterPro IPR000397; KEGG: aar:Acear_0916 HSP33 protein; PFAM: Heat shock protein Hsp33 protein; SPTR: 33 kDa chaperonin.


ensembl_gene_id: Turpa_1531
symbol: AFM12179.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function (DUF752); COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: tgr:Tgr7_1861 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: Protein of unknown function DUF752; SPTR: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC.


ensembl_gene_id: Turpa_1532
symbol: AFM12180.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.


ensembl_gene_id: Turpa_1534
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: Turpa_1535
symbol: purC
gene_biotype: protein_coding
description:
  PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; InterPro IPR001636; KEGG: lbl:LBL_2381 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: Turpa_1536
symbol: AFM12184.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS; PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein; COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: bts:Btus_0816 phosphoribosylformylglycinamidine synthase, PurS; PFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; SPTR: Phosphoribosylformylglycinamidine synthase, purS; TIGRFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit.


ensembl_gene_id: Turpa_1537
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to  [...]


ensembl_gene_id: Turpa_1538
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Turpa_1539
symbol: AFM12187.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG1040 amidophosphoribosyltransferase; KEGG: chl:Chy400_1996 amidophosphoribosyltransferase-like protein; SPTR: Amidophosphoribosyltransferase-like protein.


ensembl_gene_id: Turpa_1540
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Turpa_1541
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: Turpa_1542
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: Turpa_1543
symbol: AFM12191.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; Flagellin hook IN motif; TIGRFAM: flagellar hook-associated protein 3; COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR010810:IPR013384; KEGG: lbf:LBF_3100 flagellar hook-associated protein FlgL; PFAM: Flagellin hook, IN motif; Flagellin, N-terminal; SPTR: Flagellar hook-associated protein 3 (HAP3); TIGRFAM: Flagellar hook-associated protein 3.


ensembl_gene_id: Turpa_1544
symbol: AFM12192.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein FlgK; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK; COGs: COG1256 Flagellar hook-associated protein; InterPro IPR010930:IPR002371; KEGG: lic:LIC13451 flagellar hook-associated protein FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar hook-associated protein 1; TIGRFAM: Flagellar hook-associated protein, FlgK.


ensembl_gene_id: Turpa_1548
symbol: AFM12196.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: rca:Rcas_1775 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: AMP-dependent synthetase and ligase.


ensembl_gene_id: Turpa_1550
symbol: AFM12198.1
gene_biotype: protein_coding
description:
  PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: ajs:Ajs_2691 beta-lactamase domain-containing protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Beta-lactamase domain protein.


ensembl_gene_id: Turpa_1551
symbol: AFM12199.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: lbl:LBL_2326 shape determination protein; PFAM: Protein of unknown function DUF583; SPTR: Predicted protein involved in cell shape determination.


ensembl_gene_id: Turpa_1552
symbol: AFM12200.1
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: lbl:LBL_2325 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; manually curated; Belongs to the PdxA family.


ensembl_gene_id: Turpa_1554
symbol: AFM12202.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; COGs: COG0232 dGTP triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; InterPro IPR003607:IPR006674:IPR006261; KEGG: har:HEAR3119 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: Deoxyguanosinetriphosphate tr [...]


ensembl_gene_id: Turpa_1556
symbol: AFM12204.1
gene_biotype: protein_coding
description:
  PFAM: Zinc dependent phospholipase C; InterPro IPR001531; KEGG: pag:PLES_15481 hypothetical protein; PFAM: Phospholipase C, zinc-binding, prokaryotic; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1557
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Turpa_1560
symbol: AFM12208.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: lbf:LBF_2393 cAMP-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Putative cAMP-binding protein.


ensembl_gene_id: Turpa_1561
symbol: AFM12209.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; KEGG: afl:Aflv_2607 protein UshA precursor (two S-layer domains; UDP-sugar hydrolase; 5'-nucleotidase); SPTR: Protein ushA (Two S-layer domains; UDP-sugar hydrolase; 5'-nucleotidase).


ensembl_gene_id: Turpa_1562
symbol: AFM12210.1
gene_biotype: protein_coding
description:
  KEGG: ptm:GSPATT00003195001 hypothetical protein; SPTR: Whole genome shotgun assembly, allelic scaffold set, scaffold scaffoldA_268.


ensembl_gene_id: Turpa_1563
symbol: AFM12211.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: shg:Sph21_3029 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase.


ensembl_gene_id: Turpa_1564
symbol: AFM12212.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Cupin domain; KEGG: sde:Sde_3782 hypothetical protein; SPTR: Cupin 2, conserved barrel.


ensembl_gene_id: Turpa_1565
symbol: AFM12213.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR003141:IPR004013:IPR011708:IPR004365:IPR004805; KEGG: lbl:LBL_0288 DNA-directed DNA polymerase, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA-directed DNA polymerase, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit.


ensembl_gene_id: Turpa_1566
symbol: AFM12214.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Histidine kinase; 7TM diverse intracellular signalling; KEGG: lbf:LBF_2450 signal transduction histidine kinase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1567
symbol: AFM12215.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: lbf:LBF_2449 two component response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: Putative two-component response  [...]


ensembl_gene_id: Turpa_1570
symbol: AFM12218.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: hch:HCH_03535 transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator.


ensembl_gene_id: Turpa_1571
symbol: AFM12219.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2306, membrane; PFAM: Predicted membrane protein (DUF2306); InterPro IPR018750; KEGG: lbf:LBF_0446 hypothetical protein; PFAM: Protein of unknown function DUF2306, membrane; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1572
symbol: AFM12220.1
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: tjr:TherJR_0815 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1574
symbol: AFM12222.1
gene_biotype: protein_coding
description:
  PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); COGs: COG0372 Citrate synthase; InterPro IPR002020:IPR010953; KEGG: lic:LIC12829 citrate synthase; PFAM: Citrate synthase-like; SPTR: Citrate synthase; TIGRFAM: Citrate synthase, type II; Belongs to the citrate synthase family.


ensembl_gene_id: Turpa_1576
symbol: AFM12224.1
gene_biotype: protein_coding
description:
  Glucose/sorbosone dehydrogenase-like protein; PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: dfe:Dfer_2887 glucose/sorbosone dehydrogenase-like protein; SPTR: Glucose/sorbosone dehydrogenase-like protein.


ensembl_gene_id: Turpa_1577
symbol: AFM12225.1
gene_biotype: protein_coding
description:
  PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR013749:IPR004399; KEGG: cag:Cagg_3167 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2.


ensembl_gene_id: Turpa_1578
symbol: AFM12226.1
gene_biotype: protein_coding
description:
  TIGRFAM: general secretion pathway protein C; KEGG: lbf:LBF_1624 type II secretory pathway protein C; SPTR: General secretion pathway protein C; putative signal peptide.


ensembl_gene_id: Turpa_1579
symbol: AFM12227.1
gene_biotype: protein_coding
description:
  PFAM: Flagellar filament outer layer protein Flaa; InterPro IPR006714; KEGG: lic:LIC10788 flagellar filament sheath protein; PFAM: Flagellar filament outer layer protein FlaA; SPTR: Flagellar filament sheath protein.


ensembl_gene_id: Turpa_1580
symbol: AFM12228.1
gene_biotype: protein_coding
description:
  PFAM: Flagellar filament outer layer protein Flaa; InterPro IPR006714; KEGG: lbl:LBL_2376 endoflagellar filament sheath protein; PFAM: Flagellar filament outer layer protein FlaA; SPTR: Endoflagellar filament sheath protein.


ensembl_gene_id: Turpa_1583
symbol: AFM12231.1
gene_biotype: protein_coding
description:
  PFAM: S1/P1 Nuclease; InterPro IPR003154; KEGG: cao:Celal_2401 S1/p1 nuclease; PFAM: S1/P1 nuclease; SPTR: S1/P1 nuclease.


ensembl_gene_id: Turpa_1584
symbol: AFM12232.1
gene_biotype: protein_coding
description:
  PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase; COGs: COG2603 ATPase; InterPro IPR001763:IPR017582; KEGG: sli:Slin_4991 tRNA 2-selenouridine synthase; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase.


ensembl_gene_id: Turpa_1586
symbol: AFM12234.1
gene_biotype: protein_coding
description:
  PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: elm:ELI_2742 alpha amylase catalytic region; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Alpha amylase catalytic region.


ensembl_gene_id: Turpa_1587
symbol: AFM12235.1
gene_biotype: protein_coding
description:
  Adenylate/guanylate cyclase with GAF sensor(s); PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR003018:IPR001054; KEGG: lbf:LBF_2448 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; SPTR: Putative adenylate cyclase; putative membrane protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.


ensembl_gene_id: Turpa_1588
symbol: AFM12236.1
gene_biotype: protein_coding
description:
  PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: pdi:BDI_1628 glucokinase; PFAM: ROK; SPTR: Putative ROK family protein.


ensembl_gene_id: Turpa_1589
symbol: AFM12237.1
gene_biotype: protein_coding
description:
  PFAM: Major Facilitator Superfamily; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: fbc:FB2170_06645 putative sugar transport-like membrane protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative sugar transport-related, membrane protein.


ensembl_gene_id: Turpa_1591
symbol: AFM12239.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; PFAM: OmpA family; InterPro IPR006665; PFAM: Outer membrane protein, OmpA/MotB, C-terminal.


ensembl_gene_id: Turpa_1592
symbol: AFM12240.1
gene_biotype: protein_coding
description:
  COGs: COG5316 conserved hypothetical protein; KEGG: mba:Mbar_A3680 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1595
symbol: AFM12243.1
gene_biotype: protein_coding
description:
  PFAM: Glutathione-dependent formaldehyde-activating enzyme; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mci:Mesci_0729 glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating, GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA.


ensembl_gene_id: Turpa_1596
symbol: AFM12244.1
gene_biotype: protein_coding
description:
  PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: smt:Smal_1683 activator of HSP90 ATPase 1 family protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein; manually curated.


ensembl_gene_id: Turpa_1597
symbol: AFM12245.1
gene_biotype: protein_coding
description:
  InterPro IPR001845; KEGG: mci:Mesci_0727 ArsR family transcription regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR.


ensembl_gene_id: Turpa_1598
symbol: AFM12246.1
gene_biotype: protein_coding
description:
  Homospermidine synthase; PFAM: Saccharopine dehydrogenase; COGs: COG5310 Homospermidine synthase; InterPro IPR009442; KEGG: mma:MM_0166 homospermidine synthase; SPTR: Homospermidine synthase.


ensembl_gene_id: Turpa_1599
symbol: AFM12247.1
gene_biotype: protein_coding
description:
  Nuclear protein SET; PFAM: SET domain; InterPro IPR001214; KEGG: ngr:NAEGRDRAFT_78553 hypothetical protein; PFAM: SET; SMART: SET; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1600
symbol: AFM12248.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Turpa_1601
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: Turpa_1602
symbol: AFM12250.1
gene_biotype: protein_coding
description:
  PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001516:IPR001750:IPR003945; KEGG: gau:GAU_2392 NADH-quinone oxidoreductase chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; SPTR: NADH-quinone oxidoreductase chain L; TIGRFAM: NADH-plastoquinone oxidoreduct [...]


ensembl_gene_id: Turpa_1603
symbol: AFM12251.1
gene_biotype: protein_coding
description:
  PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR001750:IPR010227; KEGG: mgm:Mmc1_3623 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; SPTR: NADH dehydrogenase subunit M; TIGRFAM: NADH-quinone oxidoreductase, chain M.


ensembl_gene_id: Turpa_1604
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: Turpa_1605
symbol: AFM12253.1
gene_biotype: protein_coding
description:
  Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254; KEGG: lbf:LBF_0504 trypsin-like serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Putative serine-type endopeptidase; putative signal peptide.


ensembl_gene_id: Turpa_1606
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Turpa_1607
symbol: AFM12255.1
gene_biotype: protein_coding
description:
  PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: lic:LIC12569 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1609
symbol: AFM12257.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789; KEGG: adg:Adeg_2019 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein.


ensembl_gene_id: Turpa_1611
symbol: AFM12259.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bgl:bglu_2g04620 putative membrane-anchored cell surface protein; SPTR: Putative membrane-anchored cell surface protein.


ensembl_gene_id: Turpa_1615
symbol: AFM12263.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: geo:Geob_1435 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2.


ensembl_gene_id: Turpa_1617
symbol: AFM12265.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: bpb:bpr_I2548 GNAT family acetyltransferase; SPTR: Acetyltransferase GNAT family.


ensembl_gene_id: Turpa_1618
symbol: AFM12266.1
gene_biotype: protein_coding
description:
  PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: syp:SYNPCC7002_A2185 glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.


ensembl_gene_id: Turpa_1620
symbol: AFM12268.1
gene_biotype: protein_coding
description:
  Methyltransferase type 12; PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: nfi:NFIA_029790 sterol 24-c-methyltransferase, putative; PFAM: Methyltransferase type 12; SPTR: Similar to sterol 24-c-methyltransferase.


ensembl_gene_id: Turpa_1623
symbol: AFM12271.1
gene_biotype: protein_coding
description:
  PFAM: UbiA prenyltransferase family; InterPro IPR000537; KEGG: pph:Ppha_1111 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: UbiA prenyltransferase.


ensembl_gene_id: Turpa_1624
symbol: AFM12272.1
gene_biotype: protein_coding
description:
  PFAM: Aspartyl/Asparaginyl beta-hydroxylase; COGs: COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenase; InterPro IPR007803; KEGG: amr:AM1_0723 aspartyl/asparaginyl beta-hydroxylase, putative; PFAM: Aspartyl/Asparaginyl beta-hydroxylase; SPTR: Aspartyl/asparaginyl beta-hydroxylase, putative.


ensembl_gene_id: Turpa_1626
symbol: AFM12274.1
gene_biotype: protein_coding
description:
  KEGG: bcv:Bcav_2782 Ig domain protein group 1 domain protein; SPTR: Ig domain protein group 1 domain protein.


ensembl_gene_id: Turpa_1627
symbol: AFM12275.1
gene_biotype: protein_coding
description:
  Hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR015991; KEGG: lil:LA_4340 Mg-dependent DNase; PFAM: Deoxyribonuclease, TatD-related; SPTR: TatD; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; manually curated.


ensembl_gene_id: Turpa_1628
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Turpa_1629
symbol: AFM12277.1
gene_biotype: protein_coding
description:
  PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR007627:IPR014284; KEGG: lbl:LBL_0290 RNA polymerase sigma subunit; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma subunit; TIGRFAM: RNA polymerase sigma-70; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Turpa_1631
symbol: AFM12279.1
gene_biotype: protein_coding
description:
  PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); InterPro IPR006222:IPR013977:IPR006223; KEGG: lic:LIC10311 glycine cleavage system aminomethyltransferase T; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein.


ensembl_gene_id: Turpa_1633
symbol: AFM12281.1
gene_biotype: protein_coding
description:
  Phosphoesterase HXTX; PFAM: 2',5' RNA ligase family; COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051; KEGG: cpi:Cpin_1148 phosphoesterase HXTX; PFAM: Phosphoesterase, HXTX; SPTR: Phosphoesterase HXTX.


ensembl_gene_id: Turpa_1634
symbol: AFM12282.1
gene_biotype: protein_coding
description:
  PFAM: Fibronectin type III domain; Putative Ig domain; InterPro IPR003961:IPR008009; KEGG: lil:LB_225 hypothetical protein; PFAM: Fibronectin, type III; Putative Ig; SMART: Fibronectin, type III; SPTR: Lipoprotein.


ensembl_gene_id: Turpa_1635
symbol: AFM12283.1
gene_biotype: protein_coding
description:
  InterPro IPR001258; KEGG: geo:Geob_3253 NHL repeat containing protein; PFAM: NHL repeat; SPTR: NHL repeat containing protein.


ensembl_gene_id: Turpa_1636
symbol: AFM12284.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF2237; PFAM: Uncharacterized protein conserved in bacteria (DUF2237); COGs: COG3651 conserved hypothetical protein; InterPro IPR018714; KEGG: rba:RB3906 hypothetical protein; PFAM: Protein of unknown function DUF2237; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1639
symbol: AFM12287.1
gene_biotype: protein_coding
description:
  Protein of unknown function methylase putative; PFAM: S-adenosylmethionine-dependent methyltransferase; COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR016065; KEGG: cpi:Cpin_6906 methyltransferase type 11; PFAM: Protein of unknown function methylase putative; SPTR: Methyltransferase type 11.


ensembl_gene_id: Turpa_1640
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: Turpa_1641
symbol: AFM12289.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: lil:LA_0455 transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator.


ensembl_gene_id: Turpa_1642
symbol: AFM12290.1
gene_biotype: protein_coding
description:
  PFAM: Fatty acid desaturase; COGs: COG1398 Fatty-acid desaturase; InterPro IPR005804; KEGG: lic:LIC20052 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty-acid desaturase.


ensembl_gene_id: Turpa_1643
symbol: AFM12291.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: neu:NE1847 guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Guanylate cyclase.


ensembl_gene_id: Turpa_1644
symbol: AFM12292.1
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG1639 signal transduction protein; InterPro IPR003607:IPR013976:IPR006675; KEGG: lbf:LBF_2346 signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Putative uncharacterized protein; TIGRFAM: HDIG.


ensembl_gene_id: Turpa_1645
symbol: AFM12293.1
gene_biotype: protein_coding
description:
  PFAM: Acyltransferase family; COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: mes:Meso_0485 acyltransferase 3; PFAM: Acyltransferase 3; SPTR: Acyltransferase 3.


ensembl_gene_id: Turpa_1646
symbol: AFM12294.1
gene_biotype: protein_coding
description:
  PFAM: Ankyrin repeat; InterPro IPR002110; KEGG: mmb:Mmol_0678 ankyrin; PFAM: Ankyrin repeat; SPTR: Ankyrin.


ensembl_gene_id: Turpa_1649
symbol: AFM12297.1
gene_biotype: protein_coding
description:
  PFAM: Bacterial SH3 domain; InterPro IPR013247; KEGG: lbf:LBF_4214 hypothetical protein; PFAM: SH3, type 3; SPTR: Putative uncharacterized protein; manually curated.


ensembl_gene_id: Turpa_1652
symbol: AFM12300.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: tmr:Tmar_0390 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Turpa_1654
symbol: AFM12302.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; KEGG: lbl:LBL_0760 hypothetical protein; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1656
symbol: AFM12304.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: dol:Dole_1921 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl-CoA dehydrogenase domain protein.


ensembl_gene_id: Turpa_1657
symbol: AFM12305.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: rmr:Rmar_2599 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family.


ensembl_gene_id: Turpa_1659
symbol: AFM12307.1
gene_biotype: protein_coding
description:
  Negative transcriptional regulator, PaiB family; PFAM: Putative FMN-binding domain; COGs: COG2808 Transcriptional regulator; InterPro IPR007396; KEGG: bpf:BpOF4_18330 sporulation and degradative enzyme transcriptional repressor; PFAM: Negative transcriptional regulator; SPTR: Transcriptional repressor of sporulation and degradative enzyme production.


ensembl_gene_id: Turpa_1660
symbol: AFM12308.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cpi:Cpin_6750 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative transcriptional regulator.


ensembl_gene_id: Turpa_1661
symbol: AFM12309.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: vcj:VCD_000677 glyoxalase family protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1663
symbol: AFM12311.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: mgm:Mmc1_1094 putative outer membrane adhesin like proteiin; SPTR: PKD domain containing protein.


ensembl_gene_id: Turpa_1664
symbol: AFM12312.1
gene_biotype: protein_coding
description:
  Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: chu:CHU_2541 protease; PFAM: Abortive infection protein; SPTR: Protease.


ensembl_gene_id: Turpa_1667
symbol: AFM12315.1
gene_biotype: protein_coding
description:
  PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_00846 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase.


ensembl_gene_id: Turpa_1669
symbol: AFM12317.1
gene_biotype: protein_coding
description:
  PFAM: Glutathione peroxidase; COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: gwc:GWCH70_1570 glutathione peroxidase; PFAM: Glutathione peroxidase; SPTR: Glutathione peroxidase; Belongs to the glutathione peroxidase family.


ensembl_gene_id: Turpa_1670
symbol: AFM12318.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: lbf:LBF_0108 enoyl-CoA hydratase/carnithine racemase; PFAM: Crotonase, core; SPTR: Putative enoyl-CoA hydratase/carnithine racemase.


ensembl_gene_id: Turpa_1671
symbol: AFM12319.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PFAM: Glycosyl hydrolases family 18; COGs: COG3858 glycosyl hydrolase; KEGG: swo:Swol_1871 glycosyl hydrolase-like protein; SPTR: Glycosyl hydrolase-like protein.


ensembl_gene_id: Turpa_1672
symbol: AFM12320.1
gene_biotype: protein_coding
description:
  PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: chu:CHU_2500 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1673
symbol: AFM12321.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: TIGR04168 family protein; InterPro IPR004843; KEGG: lbf:LBF_3095 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Putative uncharacterized protein.


ensembl_gene_id: Turpa_1674
symbol: AFM12322.1
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function (DUF897); COGs: COG3329 permease; InterPro IPR010293; KEGG: lbf:LBF_4257 permease; PFAM: Protein of unknown function DUF897; SPTR: Putative sodium bicarbonate cotransporter; putative membrane protein.


ensembl_gene_id: Turpa_1676
symbol: AFM12324.1
gene_biotype: protein_coding
description:
  RDD domain containing protein; PFAM: RDD family; InterPro IPR010432; KEGG: shm:Shewmr7_2450 RDD domain-containing protein; PFAM: RDD; SPTR: RDD domain containing protein.


ensembl_gene_id: Turpa_1677
symbol: AFM12325.1
gene_biotype: protein_coding
description:
  PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: rbi:RB2501_11892 putative thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; Belongs to the thioredoxin family.


ensembl_gene_id: Turpa_1681
symbol: AFM12329.1
gene_biotype: protein_coding
description:
  PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: ter:Tery_3999 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.


ensembl_gene_id: Turpa_1682
symbol: AFM12330.1
gene_biotype: protein_coding
description:
  PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: gsu:GSU3138 sensor histidine kinase/response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Sensor histidine kinase/response regulator.


ensembl_gene_id: Turpa_1683
symbol: AFM12331.1
gene_biotype: protein_coding
description:
  PFAM: Phosphotransferase enzyme family; COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR002575; KEGG: lbf:LBF_3218 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: Putative phosphotransferase.


ensembl_gene_id: Turpa_1686
symbol: AFM12334.1
gene_biotype: protein_coding
description:
  PFAM: Phosphoglycerate mutase family; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: lbf:LBF_3216 phosphatase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase family protein.


ensembl_gene_id: Turpa_1688
symbol: AFM12336.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: lbf:LBF_0018 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-[acyl-carrier-protein] reductase.


ensembl_gene_id: Turpa_1689
symbol: AFM12337.1
gene_biotype: protein_coding
description:
  PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003018:IPR000014:IPR003661:IPR003594:IPR001789:IPR0136 56; KEGG: nde:NIDE0815 putative hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; PAS fold-4; Signal transduction response regulator, receiver region; SMART: ATP-binding region, AT [...]


