# geneInfo

ensembl_gene_id: AM629_00005
symbol: KOY63864.1
gene_biotype: protein_coding
description:
  Vrg family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00010
symbol: KOY63865.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00040
symbol: KOY63870.1
gene_biotype: protein_coding
description:
  Nucleoside transporter NupC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00045
symbol: KOY63871.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease YjjV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00050
symbol: KOY63872.1
gene_biotype: protein_coding
description:
  Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00055
symbol: KOY63873.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00060
symbol: KOY63874.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00070
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00075
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: AM629_00080
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: AM629_00085
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00090
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00095
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00105
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: AM629_00110
symbol: yiaY
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00115
symbol: KOY63885.1
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00130
symbol: gndA
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00140
symbol: KOY63890.1
gene_biotype: protein_coding
description:
  GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00145
symbol: asmA
gene_biotype: protein_coding
description:
  Membrane assembly protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00150
symbol: KOY63892.1
gene_biotype: protein_coding
description:
  Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00155
symbol: KOY63893.1
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00160
symbol: apbC
gene_biotype: protein_coding
description:
  Antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00165
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: AM629_00180
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: AM629_00185
symbol: KOY63899.1
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00190
symbol: sanA
gene_biotype: protein_coding
description:
  Vancomycin high temperature exclusion protein; Involved in vancomycin sensitivity and other barrier functions of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00200
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00205
symbol: KOY63902.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00210
symbol: KOY63903.1
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00215
symbol: moeA
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: AM629_00220
symbol: moeB
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00225
symbol: KOY63906.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00235
symbol: KOY63907.1
gene_biotype: protein_coding
description:
  NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00250
symbol: KOY63909.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00255
symbol: rhtA
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00260
symbol: dps
gene_biotype: protein_coding
description:
  Binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00265
symbol: KOY63912.1
gene_biotype: protein_coding
description:
  PhnA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00275
symbol: sseA
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00295
symbol: dusC
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00300
symbol: rhlE
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlE; This helicase is not essential cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00305
symbol: KOY63920.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00315
symbol: KOY63922.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00335
symbol: moaE
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaE; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00340
symbol: moaD
gene_biotype: protein_coding
description:
  Molybdopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00345
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00350
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: AM629_00360
symbol: uvrB
gene_biotype: protein_coding
description:
  The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00365
symbol: KOY63931.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: AM629_00375
symbol: KOY63933.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: AM629_00380
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. Belongs to the dethiobiotin synthetase family.


ensembl_gene_id: AM629_00385
symbol: bioC
gene_biotype: protein_coding
description:
  Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: AM629_00390
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: AM629_00395
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the formation of biotin from dethiobiotin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00400
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: AM629_00405
symbol: KOY63939.1
gene_biotype: protein_coding
description:
  6-phosphogluconolactonase; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00410
symbol: KOY63940.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00415
symbol: modC
gene_biotype: protein_coding
description:
  Molybdate transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: AM629_00420
symbol: modB
gene_biotype: protein_coding
description:
  Part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00425
symbol: modA
gene_biotype: protein_coding
description:
  Molybdate transporter; With ModCB is involved in the high-affinity transport of molybdate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00430
symbol: acrZ
gene_biotype: protein_coding
description:
  Hypothetical protein; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export.


ensembl_gene_id: AM629_00435
symbol: modE
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00440
symbol: modF
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Contains 2 ATP-binding cassettes; involved in the transport of molybdenum; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00445
symbol: KOY63947.1
gene_biotype: protein_coding
description:
  CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00450
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: AM629_00455
symbol: aroG
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00460
symbol: KOY63950.1
gene_biotype: protein_coding
description:
  Involved in nicotinamide riboside transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00470
symbol: KOY63952.1
gene_biotype: protein_coding
description:
  Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: AM629_00475
symbol: KOY63953.1
gene_biotype: protein_coding
description:
  Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00505
symbol: KOY63959.1
gene_biotype: protein_coding
description:
  Histone acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00520
symbol: KOY63961.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00525
symbol: KOY63962.1
gene_biotype: protein_coding
description:
  Heme receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00550
symbol: KOY63964.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00555
symbol: KOY63965.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00565
symbol: KOY63967.1
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00585
symbol: prpE
gene_biotype: protein_coding
description:
  Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00590
symbol: prpD
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00595
symbol: prpC
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00600
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00605
symbol: prpR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Sigma-54 dependent activator family protein; activates the prpBCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00610
symbol: KOY63975.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00615
symbol: KOY64039.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00620
symbol: KOY63976.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00625
symbol: KOY63977.1
gene_biotype: protein_coding
description:
  Antibiotic acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00635
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: AM629_00640
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: AM629_00650
symbol: recJ
gene_biotype: protein_coding
description:
  ssDNA exonuclease RecJ; 5'-3' single-stranded-DNA-specific exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00655
symbol: dsbC
gene_biotype: protein_coding
description:
  Protein-disulfide isomerase; DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00660
symbol: xerD
gene_biotype: protein_coding
description:
  Recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerC binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerD specifically exchanges the bottom [...]


ensembl_gene_id: AM629_00665
symbol: fldB
gene_biotype: protein_coding
description:
  Flavodoxin FldB; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00680
symbol: ygfZ
gene_biotype: protein_coding
description:
  Global regulator; Physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulato; Hda supressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00685
symbol: KOY63985.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00690
symbol: KOY63986.1
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00780
symbol: KOY64000.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00785
symbol: pabB-2
gene_biotype: protein_coding
description:
  P-aminobenzoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00790
symbol: KOY64002.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00795
symbol: KOY64003.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00800
symbol: KOY64004.1
gene_biotype: protein_coding
description:
  Modification methylase hemk precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00805
symbol: KOY64005.1
gene_biotype: protein_coding
description:
  Formimidoyl fortimicin A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00810
symbol: KOY64006.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00820
symbol: KOY64007.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AM629_00830
symbol: KOY64009.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00835
symbol: KOY64010.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00840
symbol: KOY64011.1
gene_biotype: protein_coding
description:
  Phenylacetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: AM629_00865
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: AM629_00870
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: AM629_00875
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00880
symbol: ubiI
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00885
symbol: ubiH
gene_biotype: protein_coding
description:
  2-octaprenyl-6-methoxyphenyl hydroxylase; Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00890
symbol: pepP
gene_biotype: protein_coding
description:
  Prolyl aminopeptidase; Exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00895
symbol: KOY64022.1
gene_biotype: protein_coding
description:
  Hypothetical protein; The crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00900
symbol: zapA
gene_biotype: protein_coding
description:
  Z-ring-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00905
symbol: KOY64024.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: AM629_00910
symbol: serA
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00915
symbol: rpiA
gene_biotype: protein_coding
description:
  Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00920
symbol: KOY64027.1
gene_biotype: protein_coding
description:
  Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00930
symbol: argO
gene_biotype: protein_coding
description:
  Involved in the export of arginine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00940
symbol: mscS
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Participates in the regulation of osmotic pressure changes within the cel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00950
symbol: acnB
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: AM629_00970
symbol: KOY63698.1
gene_biotype: protein_coding
description:
  Highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00975
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: AM629_00985
symbol: tonB
gene_biotype: protein_coding
description:
  Transporter; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: AM629_00990
symbol: yciA
gene_biotype: protein_coding
description:
  acyl-CoA esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_00995
symbol: KOY63703.1
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: AM629_01000
symbol: KOY63704.1
gene_biotype: protein_coding
description:
  Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01020
symbol: KOY63708.1
gene_biotype: protein_coding
description:
  Attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01030
symbol: ompW
gene_biotype: protein_coding
description:
  Hypothetical protein; Receptor for colicin S4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01035
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: AM629_01040
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; Catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01045
symbol: trpCF
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: AM629_01050
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: AM629_01055
symbol: KOY63715.1
gene_biotype: protein_coding
description:
  Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01060
symbol: KOY63716.1
gene_biotype: protein_coding
description:
  Anthranilate synthase; With component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01070
symbol: KOY63855.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01080
symbol: rluB
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: AM629_01085
symbol: cobO
gene_biotype: protein_coding
description:
  cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: AM629_01090
symbol: KOY63721.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01095
symbol: KOY63722.1
gene_biotype: protein_coding
description:
  Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01100
symbol: sohB
gene_biotype: protein_coding
description:
  Peptidase; Multicopy suppressor of htrA(degP); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01105
symbol: KOY63724.1
gene_biotype: protein_coding
description:
  Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01115
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01120
symbol: cysB
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01135
symbol: ribA
gene_biotype: protein_coding
description:
  Catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01145
symbol: lapB
gene_biotype: protein_coding
description:
  Hypothetical protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: AM629_01150
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01155
symbol: yciH
gene_biotype: protein_coding
description:
  Translation initiation factor Sui1; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01160
symbol: KOY63733.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01165
symbol: KOY63734.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01170
symbol: KOY63735.1
gene_biotype: protein_coding
description:
  Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01175
symbol: KOY63736.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01190
symbol: KOY63739.1
gene_biotype: protein_coding
description:
  Cytotoxic necrotizing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01195
symbol: KOY63740.1
gene_biotype: protein_coding
description:
  Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01210
symbol: KOY63743.1
gene_biotype: protein_coding
description:
  RtxA toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01220
symbol: KOY63745.1
gene_biotype: protein_coding
description:
  AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01245
symbol: KOY63750.1
gene_biotype: protein_coding
description:
  Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01285
symbol: KOY63757.1
gene_biotype: protein_coding
description:
  Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01290
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01295
symbol: KOY63759.1
gene_biotype: protein_coding
description:
  Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01300
symbol: rsxG
gene_biotype: protein_coding
description:
  Electron transporter RnfG; Part of membrane-bound complex hought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01305
symbol: rsxD
gene_biotype: protein_coding
description:
  Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: AM629_01310
symbol: rsxC
gene_biotype: protein_coding
description:
  Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: AM629_01315
symbol: rsxB
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Part of membrane-bound complex thought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01320
symbol: rsxA
gene_biotype: protein_coding
description:
  Electron transporter RsxA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01355
symbol: KOY63771.1
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01360
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: AM629_01370
symbol: manA
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01375
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01385
symbol: KOY63777.1
gene_biotype: protein_coding
description:
  Toxin-antitoxin system antitoxin component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01395
symbol: KOY63779.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01400
symbol: KOY63780.1
gene_biotype: protein_coding
description:
  DNA replication terminus site-binding protein; Binds to DNA replication terminator sequences to prevent passage of replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01405
symbol: KOY63781.1
gene_biotype: protein_coding
description:
  Lysine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01410
symbol: KOY63857.1
gene_biotype: protein_coding
description:
  Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01415
symbol: KOY63782.1
gene_biotype: protein_coding
description:
  Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01420
symbol: KOY63783.1
gene_biotype: protein_coding
description:
  Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01455
symbol: KOY63789.1
gene_biotype: protein_coding
description:
  Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01460
symbol: KOY63790.1
gene_biotype: protein_coding
description:
  Arsenite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01465
symbol: arsH
gene_biotype: protein_coding
description:
  Arsenic resistance protein ArsH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01480
symbol: KOY63793.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01485
symbol: KOY63794.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Mlc, controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems, regulates genes involved in the uptake of sugars; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01490
symbol: bioD-2
gene_biotype: protein_coding
description:
  DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01505
symbol: ydfG
gene_biotype: protein_coding
description:
  Malonic semialdehyde reductase; NADP(+)-dependent; catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde, catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01510
symbol: KOY63799.1
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01515
symbol: KOY63800.1
gene_biotype: protein_coding
description:
  Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01520
symbol: KOY63801.1
gene_biotype: protein_coding
description:
  Insecticial toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01525
symbol: KOY63802.1
gene_biotype: protein_coding
description:
  Peptidase S58; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01555
symbol: KOY63807.1
gene_biotype: protein_coding
description:
  Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01560
symbol: KOY63808.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01565
symbol: KOY63809.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01570
symbol: KOY63810.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01575
symbol: KOY63811.1
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01580
symbol: KOY63812.1
gene_biotype: protein_coding
description:
  Omega amino acid--pyruvate aminotransferase; Catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AM629_01590
symbol: KOY63814.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01595
symbol: KOY63815.1
gene_biotype: protein_coding
description:
  XylR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01600
symbol: xylA
gene_biotype: protein_coding
description:
  Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family.


ensembl_gene_id: AM629_01605
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulose kinase; Catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01625
symbol: KOY63820.1
gene_biotype: protein_coding
description:
  Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01630
symbol: KOY63861.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01635
symbol: KOY63821.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01640
symbol: KOY63822.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01645
symbol: KOY63823.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01650
symbol: KOY63824.1
gene_biotype: protein_coding
description:
  Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01665
symbol: KOY63862.1
gene_biotype: protein_coding
description:
  2-oxoacid ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01675
symbol: KOY63828.1
gene_biotype: protein_coding
description:
  Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01685
symbol: KOY63830.1
gene_biotype: protein_coding
description:
  1,2-oxophytodienoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01705
symbol: KOY63834.1
gene_biotype: protein_coding
description:
  Prevent-host-death protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01710
symbol: KOY63835.1
gene_biotype: protein_coding
description:
  Pvp sensor (virulence sensor protein bvgs); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01715
symbol: KOY63836.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01725
symbol: tssH
gene_biotype: protein_coding
description:
  ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: AM629_01745
symbol: KOY63842.1
gene_biotype: protein_coding
description:
  Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01790
symbol: tssC
gene_biotype: protein_coding
description:
  EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01810
symbol: KOY63854.1
gene_biotype: protein_coding
description:
  DNA-packaging protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01820
symbol: flgL
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgL; With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01825
symbol: flgK
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgK; With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01830
symbol: flgJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01835
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgA; Part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01840
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: AM629_01845
symbol: flgG
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgG; Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01850
symbol: flgF
gene_biotype: protein_coding
description:
  FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01855
symbol: flgE
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgE; The hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01860
symbol: flgD
gene_biotype: protein_coding
description:
  Acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01865
symbol: flgC
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgC; With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01870
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01875
symbol: flgA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01880
symbol: flgM
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgM; Regulates the flagellar specific sigma28 transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01885
symbol: KOY63579.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01955
symbol: KOY63690.1
gene_biotype: protein_coding
description:
  Adhesin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01980
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_01985
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02005
symbol: KOY63597.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02010
symbol: KOY63598.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02015
symbol: KOY63691.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02020
symbol: cheZ
gene_biotype: protein_coding
description:
  Chemotaxis protein CheZ; Cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02025
symbol: cheY
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02030
symbol: KOY63601.1
gene_biotype: protein_coding
description:
  Regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02035
symbol: cheR
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylates the MCP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02040
symbol: KOY63603.1
gene_biotype: protein_coding
description:
  Methyl-accepting protein IV; Mediates taxis toward dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02045
symbol: KOY63604.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02050
symbol: cheW
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02055
symbol: cheA
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02060
symbol: motB
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02065
symbol: motA
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02070
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator; With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02075
symbol: flhD
gene_biotype: protein_coding
description:
  Transcriptional regulator; With FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02085
symbol: cspE
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02120
symbol: bssS
gene_biotype: protein_coding
description:
  BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02125
symbol: KOY63616.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02130
symbol: KOY63617.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02135
symbol: KOY63618.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02140
symbol: lpxL
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: AM629_02145
symbol: KOY63620.1
gene_biotype: protein_coding
description:
  Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02155
symbol: KOY63622.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02165
symbol: KOY63624.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein HesB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02170
symbol: KOY63625.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02175
symbol: iolD
gene_biotype: protein_coding
description:
  3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02180
symbol: iolG
gene_biotype: protein_coding
description:
  Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02185
symbol: KOY63628.1
gene_biotype: protein_coding
description:
  Transporter; Uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: AM629_02190
symbol: KOY63629.1
gene_biotype: protein_coding
description:
  Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02195
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02200
symbol: iolE
gene_biotype: protein_coding
description:
  Myo-inosose-2 dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02205
symbol: iolB
gene_biotype: protein_coding
description:
  5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02210
symbol: KOY63633.1
gene_biotype: protein_coding
description:
  Phenazine biosynthesis PhzC/PhzF protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02215
symbol: cas6f
gene_biotype: protein_coding
description:
  CRISPR-associated protein Csy4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02220
symbol: csy3
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02225
symbol: csy2
gene_biotype: protein_coding
description:
  CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02235
symbol: KOY63638.1
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02245
symbol: cas3f
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02250
symbol: cas1f
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: AM629_02270
symbol: KOY63643.1
gene_biotype: protein_coding
description:
  Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02275
symbol: KOY63644.1
gene_biotype: protein_coding
description:
  Adenine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02280
symbol: KOY63693.1
gene_biotype: protein_coding
description:
  DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02300
symbol: KOY63646.1
gene_biotype: protein_coding
description:
  Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02305
symbol: hspQ
gene_biotype: protein_coding
description:
  Heat-shock protein HspQ; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress; Belongs to the HspQ family.


ensembl_gene_id: AM629_02315
symbol: mgsA
gene_biotype: protein_coding
description:
  Methylglyoxal synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02320
symbol: helD
gene_biotype: protein_coding
description:
  DNA helicase IV; Catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02330
symbol: KOY63652.1
gene_biotype: protein_coding
description:
  DNA transformation protein tfoX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02335
symbol: sulA
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02340
symbol: ompA
gene_biotype: protein_coding
description:
  Hypothetical protein; OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.


ensembl_gene_id: AM629_02345
symbol: matP
gene_biotype: protein_coding
description:
  Ter macrodomain organizer matS-binding protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.


ensembl_gene_id: AM629_02350
symbol: KOY63694.1
gene_biotype: protein_coding
description:
  Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02355
symbol: fabA
gene_biotype: protein_coding
description:
  Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02370
symbol: pqiB
gene_biotype: protein_coding
description:
  Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02375
symbol: pqiA
gene_biotype: protein_coding
description:
  Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02380
symbol: KOY63660.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02385
symbol: rlmL
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: AM629_02395
symbol: KOY63696.1
gene_biotype: protein_coding
description:
  N-glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02405
symbol: zapC
gene_biotype: protein_coding
description:
  Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.


ensembl_gene_id: AM629_02410
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: AM629_02425
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02430
symbol: asnS
gene_biotype: protein_coding
description:
  asparaginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02435
symbol: KOY63669.1
gene_biotype: protein_coding
description:
  Porin; Allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02450
symbol: KOY63672.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02465
symbol: ldtD
gene_biotype: protein_coding
description:
  Murein L,D-transpeptidase; Catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02490
symbol: KOY63680.1
gene_biotype: protein_coding
description:
  Type ii secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02505
symbol: KOY63683.1
gene_biotype: protein_coding
description:
  Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02520
symbol: pilV
gene_biotype: protein_coding
description:
  Secondary type iv prepilin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02525
symbol: KOY63687.1
gene_biotype: protein_coding
description:
  Prepilin; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: AM629_02530
symbol: KOY63688.1
gene_biotype: protein_coding
description:
  Type IV prepilin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02545
symbol: KOY63452.1
gene_biotype: protein_coding
description:
  Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02555
symbol: KOY63453.1
gene_biotype: protein_coding
description:
  Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: AM629_02565
symbol: KOY63454.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02570
symbol: mrcB
gene_biotype: protein_coding
description:
  Bifunctional glycosyl transferase/transpeptidase; Penicillin-binding protein 1b; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02575
symbol: hrpB
gene_biotype: protein_coding
description:
  Similar in sequence to the ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02585
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02590
symbol: gluQRS
gene_biotype: protein_coding
description:
  glutamyl-Q tRNA(Asp) ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: AM629_02595
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase I; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: AM629_02600
symbol: folK
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02605
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: AM629_02610
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02615
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02620
symbol: KOY63464.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02630
symbol: KOY63466.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Catalyzes the interconversion of bicarbonate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02635
symbol: KOY63467.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02645
symbol: KOY63469.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02660
symbol: cueO
gene_biotype: protein_coding
description:
  Laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02670
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02675
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02680
symbol: KOY63558.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02690
symbol: KOY63559.1
gene_biotype: protein_coding
description:
  Enterotoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02695
symbol: kbaY
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase; Catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02700
symbol: KOY63477.1
gene_biotype: protein_coding
description:
  PTS N-acetylgalactosamine transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02705
symbol: KOY63478.1
gene_biotype: protein_coding
description:
  PTS N-acetylgalactosamine transporter subunit IID; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IID with IIC forms the translocation channel; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02710
symbol: KOY63479.1
gene_biotype: protein_coding
description:
  PTS N-acetylgalactosamine transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake;involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02715
symbol: agaV
gene_biotype: protein_coding
description:
  PTS N-acetylgalactosamine transporter subunit IIB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02720
symbol: KOY63481.1
gene_biotype: protein_coding
description:
  Tagatose-6-phosphate ketose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02725
symbol: KOY63560.1
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase; With KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1,6-bisphosphate; subunit Z may act as a chaperone for the Y subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02730
symbol: KOY63482.1
gene_biotype: protein_coding
description:
  DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02735
symbol: ampC
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02740
symbol: KOY63561.1
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02750
symbol: KOY63485.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02765
symbol: KOY63488.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02770
symbol: fbpC
gene_biotype: protein_coding
description:
  Ferric transporter ATP-binding subunit; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: AM629_02825
symbol: KOY63499.1
gene_biotype: protein_coding
description:
  Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02850
symbol: fdnG
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02855
symbol: fdxH
gene_biotype: protein_coding
description:
  Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.


ensembl_gene_id: AM629_02860
symbol: fdoI
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Cytochrome b556(FDO) component; heme containing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02875
symbol: KOY63507.1
gene_biotype: protein_coding
description:
  Addiction module antitoxin RelB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02880
symbol: KOY63563.1
gene_biotype: protein_coding
description:
  MrfJ protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02890
symbol: KOY63509.1
gene_biotype: protein_coding
description:
  Exotoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02900
symbol: KOY63511.1
gene_biotype: protein_coding
description:
  Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02910
symbol: KOY63513.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02915
symbol: KOY63514.1
gene_biotype: protein_coding
description:
  Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02925
symbol: KOY63516.1
gene_biotype: protein_coding
description:
  Fimbria A protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02930
symbol: KOY63517.1
gene_biotype: protein_coding
description:
  DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02950
symbol: sspB
gene_biotype: protein_coding
description:
  Clp protease ClpP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02955
symbol: sspA
gene_biotype: protein_coding
description:
  Stringent starvation protein A; Transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02960
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02965
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02975
symbol: KOY63526.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02980
symbol: KOY63527.1
gene_biotype: protein_coding
description:
  Serine endoprotease DegQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02985
symbol: degS
gene_biotype: protein_coding
description:
  Serine endoprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_02990
symbol: ftsP
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Septal ring component that protects the divisome from stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03000
symbol: KOY63564.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of 1,2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03005
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: AM629_03010
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV; Decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03015
symbol: yqiA
gene_biotype: protein_coding
description:
  Esterase; Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03020
symbol: cpdA
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03025
symbol: nudF
gene_biotype: protein_coding
description:
  ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03050
symbol: ygiD
gene_biotype: protein_coding
description:
  Dioxygenase; Seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03055
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; functions during riboflavin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03065
symbol: hldE
gene_biotype: protein_coding
description:
  Heptose 1-phosphate adenyltransferase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03070
symbol: glnE
gene_biotype: protein_coding
description:
  Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...]


ensembl_gene_id: AM629_03080
symbol: KOY63545.1
gene_biotype: protein_coding
description:
  FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03095
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyl transferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: AM629_03100
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: AM629_03105
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: AM629_03110
symbol: plsY
gene_biotype: protein_coding
description:
  Involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03115
symbol: tsaD
gene_biotype: protein_coding
description:
  UGMP family protein; Universal genome maintenance protein; Kae1/Qri7/OSGEP/YgjD family protein; in Archaea, some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex; kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32); in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32; the protein is essential in Escherichia coli and Bacillus subtilis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03120
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03125
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; Synthesizes RNA primers at the replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03130
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03150
symbol: KOY63331.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: AM629_03155
symbol: KOY63332.1
gene_biotype: protein_coding
description:
  Major outer membrane lipoprotein; interacts with peptidoglycan to maintain the integrity of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03160
symbol: KOY63333.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03165
symbol: sufE
gene_biotype: protein_coding
description:
  Cysteine desufuration protein SufE; Acts with SufS to catalyze the formation of L-alanine from L-cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03170
symbol: sufS
gene_biotype: protein_coding
description:
  Cysteine sulfinate desulfinase; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo.


ensembl_gene_id: AM629_03175
symbol: sufD
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03180
symbol: sufC
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03185
symbol: sufB
gene_biotype: protein_coding
description:
  With SufCD activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03190
symbol: sufA
gene_biotype: protein_coding
description:
  Functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03195
symbol: menI
gene_biotype: protein_coding
description:
  Esterase; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA).


ensembl_gene_id: AM629_03205
symbol: ydiK
gene_biotype: protein_coding
description:
  YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03210
symbol: ppsA
gene_biotype: protein_coding
description:
  Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03220
symbol: KOY63435.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: AM629_03225
symbol: KOY63344.1
gene_biotype: protein_coding
description:
  Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03230
symbol: KOY63345.1
gene_biotype: protein_coding
description:
  Hemin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03235
symbol: KOY63346.1
gene_biotype: protein_coding
description:
  Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03240
symbol: KOY63347.1
gene_biotype: protein_coding
description:
  Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03245
symbol: hmuV
gene_biotype: protein_coding
description:
  Hemin importer ATP-binding subunit; With HmuTU is involved in the transport of hemin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03270
symbol: KOY63352.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03295
symbol: KOY63356.1
gene_biotype: protein_coding
description:
  Flagellar protein FlhE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03310
symbol: KOY63358.1
gene_biotype: protein_coding
description:
  Endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03315
symbol: arnF
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03325
symbol: arnT
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.


ensembl_gene_id: AM629_03330
symbol: arnD
gene_biotype: protein_coding
description:
  4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.


ensembl_gene_id: AM629_03335
symbol: arnA
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily.


ensembl_gene_id: AM629_03340
symbol: arnC
gene_biotype: protein_coding
description:
  UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.


ensembl_gene_id: AM629_03350
symbol: btuD
gene_biotype: protein_coding
description:
  Vitamin B12 ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03355
symbol: btuC
gene_biotype: protein_coding
description:
  Vitamin B12 import system permease BtuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03360
symbol: ihfA
gene_biotype: protein_coding
description:
  This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03365
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase; Catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03370
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: AM629_03375
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03380
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03385
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: AM629_03390
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: AM629_03395
symbol: KOY63372.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03400
symbol: KOY63373.1
gene_biotype: protein_coding
description:
  Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: AM629_03440
symbol: KOY63379.1
gene_biotype: protein_coding
description:
  L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: AM629_03445
symbol: htpX
gene_biotype: protein_coding
description:
  Heat-shock protein HtpX; Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: AM629_03450
symbol: KOY63381.1
gene_biotype: protein_coding
description:
  Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03455
symbol: proQ
gene_biotype: protein_coding
description:
  Prop expression regulator; Affects solute and DNA transport through an unknown mechanism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03475
symbol: copD
gene_biotype: protein_coding
description:
  Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03485
symbol: ftnA
gene_biotype: protein_coding
description:
  Ferritin; Cytoplasmic iron storage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03490
symbol: KOY63388.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03495
symbol: pip
gene_biotype: protein_coding
description:
  Proline iminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03505
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03510
symbol: KOY63391.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03515
symbol: KOY63392.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03520
symbol: manX
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03525
symbol: KOY63394.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03530
symbol: KOY63395.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IID; Hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03540
symbol: mntP
gene_biotype: protein_coding
description:
  Membrane protein YebN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03545
symbol: rlmA
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03575
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03580
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: AM629_03590
symbol: KOY63447.1
gene_biotype: protein_coding
description:
  Protease 2; PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03600
symbol: KOY63402.1
gene_biotype: protein_coding
description:
  Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03605
symbol: KOY63403.1
gene_biotype: protein_coding
description:
  Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03610
symbol: KOY63404.1
gene_biotype: protein_coding
description:
  Nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03615
symbol: KOY63405.1
gene_biotype: protein_coding
description:
  ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03620
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: AM629_03625
symbol: KOY63407.1
gene_biotype: protein_coding
description:
  Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03635
symbol: KOY63409.1
gene_biotype: protein_coding
description:
  Cetylates the wobble base C34 of the elongation-specific methionine tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03675
symbol: KOY63416.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: AM629_03705
symbol: KOY63421.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03710
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03720
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: AM629_03725
symbol: gcvR
gene_biotype: protein_coding
description:
  Glycine cleavage system transcriptional repressor; Negative transcriptional regulator of the gcvTHP operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03730
symbol: bcp
gene_biotype: protein_coding
description:
  Thiol peroxidase; Bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03735
symbol: KOY63427.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03740
symbol: bepA
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.


ensembl_gene_id: AM629_03745
symbol: arsC
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03750
symbol: hda
gene_biotype: protein_coding
description:
  Controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03755
symbol: KOY63430.1
gene_biotype: protein_coding
description:
  PTS cellobiose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03760
symbol: KOY63431.1
gene_biotype: protein_coding
description:
  PTS cellobiose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03765
symbol: KOY63432.1
gene_biotype: protein_coding
description:
  Molecular chaperone TorD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03770
symbol: KOY63433.1
gene_biotype: protein_coding
description:
  Diacetylchitobiose-6-phosphate hydrolase; Catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03790
symbol: KOY63241.1
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03795
symbol: KOY63242.1
gene_biotype: protein_coding
description:
  Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03815
symbol: KOY63245.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03835
symbol: KOY63248.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03845
symbol: KOY63326.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the expression of uxuBA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03855
symbol: KOY63251.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03865
symbol: KOY63253.1
gene_biotype: protein_coding
description:
  D-mannonate oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03870
symbol: uxaC
gene_biotype: protein_coding
description:
  Glucuronate isomerase; Catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03875
symbol: KOY63255.1
gene_biotype: protein_coding
description:
  Ketodeoxygluconokinase; Catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03880
symbol: KOY63256.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03895
symbol: KOY63258.1
gene_biotype: protein_coding
description:
  Clavaminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03930
symbol: glpD
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: AM629_03935
symbol: KOY63265.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03940
symbol: glpG
gene_biotype: protein_coding
description:
  Rhomboid intramembrane serine protease GlpG; Protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03945
symbol: glpE
gene_biotype: protein_coding
description:
  Belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03950
symbol: nfuA
gene_biotype: protein_coding
description:
  Fe/S biogenesis protein NfuA; Cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03955
symbol: gntX
gene_biotype: protein_coding
description:
  Competence protein ComF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03960
symbol: KOY63270.1
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_03995
symbol: bioH
gene_biotype: protein_coding
description:
  Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04000
symbol: KOY63278.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter C; Regulatory protein that controls transcription of feoABC genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04005
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: AM629_04010
symbol: feoA
gene_biotype: protein_coding
description:
  Ferrous iron transporter A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04015
symbol: KOY63281.1
gene_biotype: protein_coding
description:
  Transcription accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04020
symbol: greB
gene_biotype: protein_coding
description:
  Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04030
symbol: KOY63283.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04040
symbol: ompR
gene_biotype: protein_coding
description:
  Osmolarity response regulator; Part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04045
symbol: envZ
gene_biotype: protein_coding
description:
  Osmolarity sensor protein; Membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04050
symbol: pstS
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: AM629_04055
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate transporter permease subunit PstC; Part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04060
symbol: pstA
gene_biotype: protein_coding
description:
  Phosphate transporter permease subunit PtsA; Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04065
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04070
symbol: phoU
gene_biotype: protein_coding
description:
  Transcriptional regulator PhoU; Regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04075
symbol: KOY63292.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04080
symbol: KOY63293.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04110
symbol: KOY63298.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04115
symbol: yihI
gene_biotype: protein_coding
description:
  GTPase activator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04125
symbol: hemN
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04135
symbol: KOY63303.1
gene_biotype: protein_coding
description:
  Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04140
symbol: glnG
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: AM629_04145
symbol: glnL
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(II); Sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04150
symbol: glnA
gene_biotype: protein_coding
description:
  Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04155
symbol: typA
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04160
symbol: KOY63308.1
gene_biotype: protein_coding
description:
  Disulfide bond formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04165
symbol: KOY63309.1
gene_biotype: protein_coding
description:
  Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04170
symbol: yihX
gene_biotype: protein_coding
description:
  alpha-D-glucose-1-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04175
symbol: dtd
gene_biotype: protein_coding
description:
  Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04190
symbol: KOY63314.1
gene_biotype: protein_coding
description:
  Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04200
symbol: KOY63329.1
gene_biotype: protein_coding
description:
  Pyoverdin chromophore biosynthetic protein pvcC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04205
symbol: KOY63316.1
gene_biotype: protein_coding
description:
  Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04210
symbol: gltS
gene_biotype: protein_coding
description:
  Sodium:glutamate symporter; Is involved with the sodium-dependent uptake of glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04215
symbol: KOY63318.1
gene_biotype: protein_coding
description:
  Killer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04230
symbol: KOY63321.1
gene_biotype: protein_coding
description:
  Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04255
symbol: xyeB
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04260
symbol: KOY63131.1
gene_biotype: protein_coding
description:
  Cytochrome-c oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04275
symbol: KOY63134.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04285
symbol: tyrP
gene_biotype: protein_coding
description:
  Tyrosine transporter TyrP; Tyrosine specific permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04290
symbol: KOY63136.1
gene_biotype: protein_coding
description:
  Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04295
symbol: KOY63137.1
gene_biotype: protein_coding
description:
  Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04310
symbol: KOY63139.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04345
symbol: KOY63146.1
gene_biotype: protein_coding
description:
  3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04350
symbol: KOY63147.1
gene_biotype: protein_coding
description:
  3-(2,3-dihydroxyphenyl)propionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04355
symbol: hcaB
gene_biotype: protein_coding
description:
  2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04375
symbol: hcaR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activator of 3-phenylpropionic acid catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04380
symbol: KOY63153.1
gene_biotype: protein_coding
description:
  2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04385
symbol: KOY63154.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04395
symbol: KOY63156.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04400
symbol: uspE
gene_biotype: protein_coding
description:
  Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04405
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: AM629_04410
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04415
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: AM629_04420
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in the assembly of the urease metallocenter; possible nickel donor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04425
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04430
symbol: ureB
gene_biotype: protein_coding
description:
  Urease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family.


ensembl_gene_id: AM629_04435
symbol: KOY63164.1
gene_biotype: protein_coding
description:
  Urease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04440
symbol: KOY63165.1
gene_biotype: protein_coding
description:
  Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: AM629_04455
symbol: KOY63167.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04460
symbol: KOY63232.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: AM629_04465
symbol: pntB
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: AM629_04470
symbol: pntA
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: AM629_04480
symbol: stlE
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carries the fatty acid chain in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04485
symbol: stlD
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04490
symbol: stlC
gene_biotype: protein_coding
description:
  Dialkylrecorsinol condensing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04495
symbol: KOY63233.1
gene_biotype: protein_coding
description:
  Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04545
symbol: hrpA
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04550
symbol: KOY63182.1
gene_biotype: protein_coding
description:
  FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04560
symbol: KOY63184.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Fermentative; catalyzes the formationof pyruvate from lactate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04565
symbol: hslJ
gene_biotype: protein_coding
description:
  Heat-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04595
symbol: minC
gene_biotype: protein_coding
description:
  Blocks the formation of polar Z-ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04600
symbol: minD
gene_biotype: protein_coding
description:
  ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04605
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04615
symbol: fadD
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04640
symbol: KOY63199.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04645
symbol: KOY63200.1
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04655
symbol: mdtI
gene_biotype: protein_coding
description:
  Multidrug transporter; With MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04660
symbol: mdtJ
gene_biotype: protein_coding
description:
  Spermidine export protein MdtJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04665
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04670
symbol: KOY63205.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the expression of the zwf, eda, glp and gap; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04690
symbol: pyk
gene_biotype: protein_coding
description:
  Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04705
symbol: KOY63210.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04710
symbol: KOY63211.1
gene_biotype: protein_coding
description:
  Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04715
symbol: lpxM
gene_biotype: protein_coding
description:
  Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04725
symbol: znuA
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: AM629_04730
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04735
symbol: znuB
gene_biotype: protein_coding
description:
  High-affinity zinc transporter membrane component; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04740
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; Promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04745
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; Plays an essential role in ATP-dependent branch migration of the Holliday junction; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04750
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04760
symbol: nudB
gene_biotype: protein_coding
description:
  Catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04765
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: AM629_04780
symbol: cmoA
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: AM629_04785
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04790
symbol: KOY63226.1
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04805
symbol: KOY63229.1
gene_biotype: protein_coding
description:
  Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04825
symbol: pssA
gene_biotype: protein_coding
description:
  Catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04830
symbol: KOY63058.1
gene_biotype: protein_coding
description:
  Protein acetyltransferase; Catalyzes the acetylation of lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04840
symbol: KOY63060.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04845
symbol: emrB
gene_biotype: protein_coding
description:
  Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: AM629_04850
symbol: emrA
gene_biotype: protein_coding
description:
  With ErmA and TolC forms a multidrug efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04855
symbol: mprA
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04860
symbol: ygaH
gene_biotype: protein_coding
description:
  Valine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04870
symbol: KOY63066.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04875
symbol: proX
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; With ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04880
symbol: proW
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; With ProVX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04885
symbol: proV
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; With ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04890
symbol: nrdF
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04895
symbol: nrdE
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: AM629_04900
symbol: nrdI
gene_biotype: protein_coding
description:
  In Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04905
symbol: nrdH
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04910
symbol: KOY63074.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04920
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04925
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04930
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: AM629_04940
symbol: dacA
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: AM629_04950
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell wall shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04955
symbol: KOY63083.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04960
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04965
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: AM629_04970
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04975
symbol: holA
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04980
symbol: lptE
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Rare lipoprotein B; involved in the assembly of LPS in the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04985
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational  [...]


ensembl_gene_id: AM629_04990
symbol: artP
gene_biotype: protein_coding
description:
  Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_04995
symbol: gltK
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05000
symbol: KOY63092.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05010
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: AM629_05015
symbol: corC
gene_biotype: protein_coding
description:
  Magnesium/cobalt efflux protein CorC; Involved in the transport of magnesium and cobalt ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05025
symbol: KOY63124.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05030
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05035
symbol: ubiF
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05070
symbol: KOY63098.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05075
symbol: nagA
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05080
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: AM629_05085
symbol: KOY63101.1
gene_biotype: protein_coding
description:
  PTS N-acetyl glucosamine transporter subunit IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05090
symbol: glnS
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05095
symbol: KOY63103.1
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05100
symbol: fur
gene_biotype: protein_coding
description:
  Ferric uptake regulator; Negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05110
symbol: fldA
gene_biotype: protein_coding
description:
  Flavodoxin FldA; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05115
symbol: KOY63126.1
gene_biotype: protein_coding
description:
  LexA regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05125
symbol: KOY63108.1
gene_biotype: protein_coding
description:
  Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05140
symbol: KOY63111.1
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05145
symbol: KOY63112.1
gene_biotype: protein_coding
description:
  Lysine acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05150
symbol: rtxA
gene_biotype: protein_coding
description:
  Peptidase C80; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05160
symbol: KOY63115.1
gene_biotype: protein_coding
description:
  LemA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05180
symbol: KOY63117.1
gene_biotype: protein_coding
description:
  Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05205
symbol: mazF
gene_biotype: protein_coding
description:
  Toxin MazF; ChpA; endoribonuclease; toxin of the MazF-MazE (ChpA-ChpR) toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05210
symbol: KOY63123.1
gene_biotype: protein_coding
description:
  PbsX family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05215
symbol: ribH
gene_biotype: protein_coding
description:
  RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) wh [...]


ensembl_gene_id: AM629_05220
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antiterminator NusB; Regulates rRNA biosynthesis by transcriptional antitermination; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05225
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase; Catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05230
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: AM629_05255
symbol: KOY62970.1
gene_biotype: protein_coding
description:
  Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05260
symbol: KOY62971.1
gene_biotype: protein_coding
description:
  Type III secretion system apparatus protein VscT2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05270
symbol: KOY62973.1
gene_biotype: protein_coding
description:
  Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05290
symbol: KOY62977.1
gene_biotype: protein_coding
description:
  Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05305
symbol: KOY62980.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05430
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: AM629_05435
symbol: ispA
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: AM629_05440
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Catalyzes the bidirectional exonucleolytic cleavage of DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05445
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA s(4)U8 sulfurtransferase; Catalyzes the conversion of uridine to 4-thiouridinine tRNA; also required for the synthesis of the thiazole moiety; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05455
symbol: panE
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: AM629_05460
symbol: KOY63003.1
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05470
symbol: cyoE
gene_biotype: protein_coding
description:
  Converts protoheme IX and farnesyl diphosphate to heme O; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05475
symbol: KOY63006.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05480
symbol: KOY63007.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05485
symbol: KOY63008.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05490
symbol: KOY63009.1
gene_biotype: protein_coding
description:
  Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05500
symbol: ampG
gene_biotype: protein_coding
description:
  Muropeptide transporter; In Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05510
symbol: bolA
gene_biotype: protein_coding
description:
  Positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05515
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: AM629_05540
symbol: KOY63055.1
gene_biotype: protein_coding
description:
  Prepilin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05545
symbol: KOY63018.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05550
symbol: KOY63019.1
gene_biotype: protein_coding
description:
  Type II secretion protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05600
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ClpX; Binds and unfolds substrates as part of the ClpXP protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05610
symbol: hupB
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: AM629_05625
symbol: KOY63033.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05630
symbol: queC
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein QueC; YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05635
symbol: KOY63035.1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05655
symbol: glnK
gene_biotype: protein_coding
description:
  Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05660
symbol: amtB
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05665
symbol: tesB
gene_biotype: protein_coding
description:
  palmitoyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05675
symbol: hha
gene_biotype: protein_coding
description:
  With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05685
symbol: KOY63044.1
gene_biotype: protein_coding
description:
  Multidrug transporter; With AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05690
symbol: acrR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05695
symbol: KOY63046.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05700
symbol: KOY63047.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05705
symbol: KOY63048.1
gene_biotype: protein_coding
description:
  Biotin biosynthesis protein BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05715
symbol: KOY62869.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 39; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05745
symbol: KOY62870.1
gene_biotype: protein_coding
description:
  Type VI secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05750
symbol: KOY62871.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: AM629_05795
symbol: exbD
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbD; Membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05800
symbol: exbB
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05805
symbol: metC
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05825
symbol: dkgA
gene_biotype: protein_coding
description:
  2,5-diketo-D-gluconic acid reductase; Methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05830
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05835
symbol: KOY62885.1
gene_biotype: protein_coding
description:
  Cell division protein BolA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: AM629_05840
symbol: mlaB
gene_biotype: protein_coding
description:
  Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05845
symbol: mlaC
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Involved in maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05850
symbol: mlaD
gene_biotype: protein_coding
description:
  Phospholipid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05860
symbol: mlaF
gene_biotype: protein_coding
description:
  ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05865
symbol: KOY62890.1
gene_biotype: protein_coding
description:
  Sodium:calcium antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05870
symbol: kdsD
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05875
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05880
symbol: lptC
gene_biotype: protein_coding
description:
  Lipopolysaccharide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05885
symbol: lptA
gene_biotype: protein_coding
description:
  Lipopolysaccharide transporter; LptA; periplasmic binding protein part of a putative ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05890
symbol: lptB
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05895
symbol: rpoN
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living a [...]


ensembl_gene_id: AM629_05900
symbol: KOY62897.1
gene_biotype: protein_coding
description:
  YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05905
symbol: ptsN
gene_biotype: protein_coding
description:
  Transcriptional regulator; Involved in nitrogen metabolism; protein IIA is phosphorylated by enzyme I(Ntr); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05910
symbol: rapZ
gene_biotype: protein_coding
description:
  glmZ(sRNA)-inactivating NTPase; Glucosamine-6-phosphate regulated; inactivates the glmS upregulator glmZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05915
symbol: npr
gene_biotype: protein_coding
description:
  Phosphohistidinoprotein-hexose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05920
symbol: KOY62901.1
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase regulator; Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05935
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05940
symbol: pmbA
gene_biotype: protein_coding
description:
  Peptidase PmbA; Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05955
symbol: KOY62908.1
gene_biotype: protein_coding
description:
  Barnase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05960
symbol: tldD
gene_biotype: protein_coding
description:
  Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05965
symbol: KOY62910.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05975
symbol: KOY62912.1
gene_biotype: protein_coding
description:
  Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05980
symbol: KOY62913.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05985
symbol: mreD
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Part of cell wall structural complex MreBCD; transmembrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05990
symbol: mreC
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreC; In some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_05995
symbol: KOY62915.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06000
symbol: KOY62916.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06005
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06010
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06015
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06020
symbol: lhgO
gene_biotype: protein_coding
description:
  Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06030
symbol: panF
gene_biotype: protein_coding
description:
  Sodium/panthothenate symporter; Mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: AM629_06035
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: AM629_06040
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06045
symbol: fis
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06060
symbol: KOY62927.1
gene_biotype: protein_coding
description:
  Toxin PirB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06070
symbol: livF
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter ATP-binding subunit; With LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06075
symbol: livG
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter ATP-binding subunit; Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06080
symbol: livM
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter permease subunit; Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06085
symbol: livH
gene_biotype: protein_coding
description:
  LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06090
symbol: KOY62933.1
gene_biotype: protein_coding
description:
  Leucine ABC transporter substrate-binding protein; With LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06100
symbol: KOY62935.1
gene_biotype: protein_coding
description:
  Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06105
symbol: rpoH
gene_biotype: protein_coding
description:
  Binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06110
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division protein FtsX; ABC transporter, membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06115
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division protein FtsE; ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06120
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: AM629_06125
symbol: rsmD
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: AM629_06140
symbol: KOY62943.1
gene_biotype: protein_coding
description:
  MccB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06145
symbol: zntA
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; P-type ATPase involved in the export of lead, cadmium, zinc and mercury; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06150
symbol: tusA
gene_biotype: protein_coding
description:
  TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06160
symbol: gldA
gene_biotype: protein_coding
description:
  Glycerol dehydrogenase; Forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06175
symbol: glpT
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transporter; Catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06180
symbol: glpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06185
symbol: epmA
gene_biotype: protein_coding
description:
  poxA; regulates pyruvate oxidase poxB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06205
symbol: KOY62805.1
gene_biotype: protein_coding
description:
  Tellurite resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TelA family.


ensembl_gene_id: AM629_06225
symbol: KOY62809.1
gene_biotype: protein_coding
description:
  Pili assembly chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06230
symbol: KOY62810.1
gene_biotype: protein_coding
description:
  Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06250
symbol: KOY62814.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06315
symbol: KOY62826.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06355
symbol: KOY62832.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06360
symbol: KOY62866.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06380
symbol: KOY62836.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06405
symbol: KOY62840.1
gene_biotype: protein_coding
description:
  Transfer repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06425
symbol: lepB
gene_biotype: protein_coding
description:
  Pili assembly chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: AM629_06440
symbol: KOY62846.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraN; TraN; TrhN; involved in stabilizing mating pairs during plasmid conjugation; F plasmid TraN appears to recognize OmpA in the recipient cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06505
symbol: KOY62858.1
gene_biotype: protein_coding
description:
  Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06520
symbol: KOY62868.1
gene_biotype: protein_coding
description:
  Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06530
symbol: KOY62860.1
gene_biotype: protein_coding
description:
  Thiazolinyl imide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06545
symbol: KOY62863.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06550
symbol: KOY62864.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06565
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06570
symbol: deoA
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: AM629_06575
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06580
symbol: deoD
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06585
symbol: KOY62748.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06590
symbol: KOY62749.1
gene_biotype: protein_coding
description:
  Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06615
symbol: KOY62753.1
gene_biotype: protein_coding
description:
  Daunorubicin resistance protein DrrC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06620
symbol: KOY62798.1
gene_biotype: protein_coding
description:
  Phenazine-specific anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06625
symbol: KOY62754.1
gene_biotype: protein_coding
description:
  2,3-dihydro-2,3-dihydroxybenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06630
symbol: KOY62755.1
gene_biotype: protein_coding
description:
  2,3-dihydroxybenzoate-2,3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06670
symbol: serB
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Catalyzes the formation of serine from O-phosphoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06675
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: AM629_06680
symbol: nadR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside; also has a regulatory function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06685
symbol: KOY62799.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06690
symbol: ettA
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06695
symbol: sltY
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06705
symbol: yjjX
gene_biotype: protein_coding
description:
  Purine NTP phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06710
symbol: gpmB
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06715
symbol: robA
gene_biotype: protein_coding
description:
  Transcriptional regulator; AraC family; binds to the right arm of the replication origin oriC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06725
symbol: arcA
gene_biotype: protein_coding
description:
  TorR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06730
symbol: thrA
gene_biotype: protein_coding
description:
  Aspartate kinase; Multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06735
symbol: thrB
gene_biotype: protein_coding
description:
  Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06740
symbol: thrC
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06745
symbol: yaaA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.


ensembl_gene_id: AM629_06765
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06770
symbol: mogA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MogA; Forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06785
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: AM629_06795
symbol: ascB
gene_biotype: protein_coding
description:
  6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06805
symbol: KOY62782.1
gene_biotype: protein_coding
description:
  Antiterminator Bgl; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06810
symbol: KOY62783.1
gene_biotype: protein_coding
description:
  PTS beta-glucoside transporter subunit IIABC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06820
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06825
symbol: nhaR
gene_biotype: protein_coding
description:
  Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06830
symbol: rpsT
gene_biotype: protein_coding
description:
  30S ribosomal protein S20; Binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06835
symbol: ribF
gene_biotype: protein_coding
description:
  FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06840
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: AM629_06845
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06850
symbol: fkpB
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase; accelerates isomerization of the peptidyl prolyl bond, involved in the folding of proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06855
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06860
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: AM629_06865
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06870
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06885
symbol: KOY62737.1
gene_biotype: protein_coding
description:
  Low calcium response locus protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06905
symbol: KOY62672.1
gene_biotype: protein_coding
description:
  Protein tyeA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06915
symbol: fliI
gene_biotype: protein_coding
description:
  ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06935
symbol: ssaR
gene_biotype: protein_coding
description:
  Type III secretion system protein SsaR; Part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06940
symbol: KOY62678.1
gene_biotype: protein_coding
description:
  Preprotein translocase S; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06945
symbol: KOY62679.1
gene_biotype: protein_coding
description:
  Preprotein translocase T; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06950
symbol: KOY62680.1
gene_biotype: protein_coding
description:
  Preprotein translocase U; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06955
symbol: KOY62681.1
gene_biotype: protein_coding
description:
  Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06990
symbol: KOY62688.1
gene_biotype: protein_coding
description:
  AscE protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_06995
symbol: KOY62689.1
gene_biotype: protein_coding
description:
  Type III export protein pscF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07000
symbol: KOY62690.1
gene_biotype: protein_coding
description:
  Preprotein translocase G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07010
symbol: KOY62692.1
gene_biotype: protein_coding
description:
  Preprotein translocase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07015
symbol: KOY62693.1
gene_biotype: protein_coding
description:
  Preprotein translocase J; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07020
symbol: KOY62694.1
gene_biotype: protein_coding
description:
  Preprotein translocase K; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07040
symbol: atoD
gene_biotype: protein_coding
description:
  acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07045
symbol: KOY62698.1
gene_biotype: protein_coding
description:
  Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07060
symbol: KOY62700.1
gene_biotype: protein_coding
description:
  Sporadically distributed protein, TIGR04141 family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07070
symbol: hxsC
gene_biotype: protein_coding
description:
  His-Xaa-Ser system radical SAM maturase HxsC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07075
symbol: hxsB
gene_biotype: protein_coding
description:
  His-Xaa-Ser system radical SAM maturase HxsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07090
symbol: KOY62705.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: AM629_07100
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: AM629_07105
symbol: ybcJ
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07110
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07115
symbol: ppiB
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07120
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: AM629_07125
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07130
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: AM629_07150
symbol: KOY62715.1
gene_biotype: protein_coding
description:
  Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07165
symbol: tesA
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07180
symbol: KOY62720.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07190
symbol: cueR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activator of copper-responsive regulon genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07195
symbol: copA
gene_biotype: protein_coding
description:
  Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07200
symbol: KOY62724.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07205
symbol: ushA
gene_biotype: protein_coding
description:
  5'-nucleotidase; Catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07210
symbol: KOY62726.1
gene_biotype: protein_coding
description:
  Fosmidomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07215
symbol: KOY62727.1
gene_biotype: protein_coding
description:
  Cation:proton antiport protein; YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: AM629_07235
symbol: KOY62731.1
gene_biotype: protein_coding
description:
  Fimbrial chaperone protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07250
symbol: KOY62733.1
gene_biotype: protein_coding
description:
  4-phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: AM629_07255
symbol: KOY62734.1
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07275
symbol: KOY62595.1
gene_biotype: protein_coding
description:
  Amylovoran biosynthesis protein AmsE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07300
symbol: KOY62598.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07305
symbol: KOY62599.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: AM629_07310
symbol: KOY62600.1
gene_biotype: protein_coding
description:
  dTDP-6-deoxy-3,4-keto-hexulose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07315
symbol: rfbA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: AM629_07325
symbol: KOY62603.1
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07330
symbol: KOY62666.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07335
symbol: KOY62604.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate-dependent aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07345
symbol: KOY62606.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: AM629_07370
symbol: KOY62610.1
gene_biotype: protein_coding
description:
  Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: AM629_07375
symbol: KOY62611.1
gene_biotype: protein_coding
description:
  Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07385
symbol: KOY62613.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: AM629_07390
symbol: cpxA
gene_biotype: protein_coding
description:
  Two-component sensor protein; Part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07395
symbol: cpxR
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07435
symbol: KOY62623.1
gene_biotype: protein_coding
description:
  DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07445
symbol: KOY62625.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07450
symbol: KOY62626.1
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07465
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07470
symbol: KOY62630.1
gene_biotype: protein_coding
description:
  Sulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07475
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07490
symbol: KOY62634.1
gene_biotype: protein_coding
description:
  ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07495
symbol: emrD
gene_biotype: protein_coding
description:
  Multidrug efflux protein involved in adaptation to low energy shock; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07500
symbol: glpK
gene_biotype: protein_coding
description:
  Converts glycerol and ADP to glycerol-3-phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07505
symbol: KOY62637.1
gene_biotype: protein_coding
description:
  Glycerol uptake facilitator GlpF; Involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07510
symbol: zapB
gene_biotype: protein_coding
description:
  Septal ring assembly protein ZapB; Interacts with FisZ and is necessary for Z-ring formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07515
symbol: rraA
gene_biotype: protein_coding
description:
  Ribonuclease activity regulator protein RraA; Regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07520
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: AM629_07525
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; Heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07530
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07535
symbol: ftsN
gene_biotype: protein_coding
description:
  Cell division protein FtsN; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases.


ensembl_gene_id: AM629_07545
symbol: priA
gene_biotype: protein_coding
description:
  Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: AM629_07550
symbol: rpmE
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and  [...]


ensembl_gene_id: AM629_07555
symbol: metJ
gene_biotype: protein_coding
description:
  Transcriptional repressor protein MetJ; When combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07560
symbol: metB
gene_biotype: protein_coding
description:
  Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07565
symbol: metL
gene_biotype: protein_coding
description:
  Aspartate kinase; Multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07570
symbol: metF
gene_biotype: protein_coding
description:
  MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07585
symbol: KOY62653.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Catalyzes the formation of oxaloacetate from phosphoenolpyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07590
symbol: argE
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07595
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07600
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07605
symbol: KOY62657.1
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07610
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Catalyzes the formation of arginine from (N-L-arginino)succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07615
symbol: oxyR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: AM629_07620
symbol: KOY62660.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; Catalyzes the conversion of NADPH to NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07625
symbol: fabR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07635
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: AM629_07640
symbol: btuB
gene_biotype: protein_coding
description:
  Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07645
symbol: murI
gene_biotype: protein_coding
description:
  Converts L-glutamate to D-glutamate, a component of peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07685
symbol: fepB
gene_biotype: protein_coding
description:
  Antibiotic ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07695
symbol: KOY62550.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: AM629_07710
symbol: fecE
gene_biotype: protein_coding
description:
  Iron-dicitrate transporter ATP-binding subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07715
symbol: KOY62552.1
gene_biotype: protein_coding
description:
  Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07720
symbol: entE
gene_biotype: protein_coding
description:
  Enterobactin synthase subunit E; Bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07725
symbol: KOY62554.1
gene_biotype: protein_coding
description:
  Isochorismatase; 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07730
symbol: dhbA
gene_biotype: protein_coding
description:
  2,3-dihydroxybenzoate-2,3-dehydrogenase; Catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07745
symbol: KOY62558.1
gene_biotype: protein_coding
description:
  Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07760
symbol: tppB
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily.


ensembl_gene_id: AM629_07765
symbol: hpaC
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate 3-monooxygenase; Catalyzes the reduction of MN, FAD and riboflavin by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07785
symbol: KOY62566.1
gene_biotype: protein_coding
description:
  PfaD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07815
symbol: hpaA
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate catabolism regulator HpaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07820
symbol: hpaX
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07825
symbol: hpaI
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07830
symbol: hpaH
gene_biotype: protein_coding
description:
  2-oxo-hepta-3-ene-1,7-dioate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07835
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07845
symbol: KOY62575.1
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate delta-isomerase; Catalyzes the formation of 5-oxo-pent-3-ene-1,2,5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07850
symbol: hpaD
gene_biotype: protein_coding
description:
  3,4-dihydroxyphenylacetate 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07855
symbol: hpaE
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Catalyzes the formation of betaine from betaine aldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07860
symbol: KOY62578.1
gene_biotype: protein_coding
description:
  2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07885
symbol: KOY62582.1
gene_biotype: protein_coding
description:
  Toxin HigB-2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07905
symbol: KOY62585.1
gene_biotype: protein_coding
description:
  Integrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07915
symbol: KOY62587.1
gene_biotype: protein_coding
description:
  Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07930
symbol: metA
gene_biotype: protein_coding
description:
  Catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07935
symbol: aceB
gene_biotype: protein_coding
description:
  Malate synthase; Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07940
symbol: aceA
gene_biotype: protein_coding
description:
  Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07945
symbol: aceK
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: AM629_07955
symbol: iclR
gene_biotype: protein_coding
description:
  Transcriptional repressor IclR; Regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_07980
symbol: KOY62505.1
gene_biotype: protein_coding
description:
  Aminotransferase class-iii; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08000
symbol: KOY62507.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08010
symbol: KOY62509.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08020
symbol: KOY62510.1
gene_biotype: protein_coding
description:
  Pyridoxamine-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08040
symbol: KOY62514.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate phosphomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08075
symbol: KOY62520.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08080
symbol: KOY62521.1
gene_biotype: protein_coding
description:
  RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08090
symbol: KOY62523.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08120
symbol: malQ
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Amylomaltase; acts to release glucose from maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08125
symbol: malP
gene_biotype: protein_coding
description:
  Maltose phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: AM629_08130
symbol: malT
gene_biotype: protein_coding
description:
  Transcriptional regulator MalT; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08140
symbol: KOY62532.1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AM629_08180
symbol: KOY62540.1
gene_biotype: protein_coding
description:
  ShlB/FhaC/HecB family hemolysin secretion/activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08195
symbol: KOY62441.1
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08200
symbol: KOY62442.1
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08205
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: AM629_08210
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: AM629_08220
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; Involved in a recombinational process of DNA repair, independent of the recBC complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08230
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08235
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: AM629_08240
symbol: fepE
gene_biotype: protein_coding
description:
  Enterobactin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08245
symbol: KOY62451.1
gene_biotype: protein_coding
description:
  Guanosine kinase; Catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08250
symbol: KOY62452.1
gene_biotype: protein_coding
description:
  Cytotoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08260
symbol: KOY62453.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08320
symbol: mltC
gene_biotype: protein_coding
description:
  Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08325
symbol: KOY62459.1
gene_biotype: protein_coding
description:
  Protects iron-sulfur proteins against oxidative damage; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08335
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08345
symbol: glsB
gene_biotype: protein_coding
description:
  Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.


ensembl_gene_id: AM629_08355
symbol: KOY62464.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08365
symbol: hemW
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: AM629_08370
symbol: KOY62467.1
gene_biotype: protein_coding
description:
  Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: AM629_08380
symbol: KOY62469.1
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08395
symbol: ruvX
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08405
symbol: gshB
gene_biotype: protein_coding
description:
  Catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08410
symbol: rsmE
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; In Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08420
symbol: KOY62477.1
gene_biotype: protein_coding
description:
  Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08425
symbol: KOY62478.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08435
symbol: KOY62480.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: AM629_08440
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: AM629_08445
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08450
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08455
symbol: KOY62484.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08465
symbol: nqrA
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: AM629_08470
symbol: KOY62486.1
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit B; Uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08475
symbol: KOY62487.1
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08480
symbol: KOY62488.1
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit D; Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08485
symbol: nqrE
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: AM629_08490
symbol: nqrF
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit F; Uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08495
symbol: KOY62491.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: AM629_08510
symbol: KOY62383.1
gene_biotype: protein_coding
description:
  Bleomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08555
symbol: zur
gene_biotype: protein_coding
description:
  Zinc uptake transcriptional repressor; Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08560
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08565
symbol: KOY62392.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08570
symbol: plsB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family.


ensembl_gene_id: AM629_08575
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: AM629_08580
symbol: ubiC
gene_biotype: protein_coding
description:
  Chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway.


ensembl_gene_id: AM629_08585
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08590
symbol: lysC
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08605
symbol: KOY62399.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08610
symbol: KOY62400.1
gene_biotype: protein_coding
description:
  N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08625
symbol: KOY62402.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates the genes for iron dicitrate transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08630
symbol: fecR
gene_biotype: protein_coding
description:
  Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08640
symbol: fecB
gene_biotype: protein_coding
description:
  Iron-dicitrate transporter substrate-binding subunit; Part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08645
symbol: fecC
gene_biotype: protein_coding
description:
  Iron-dicitrate transporter permease subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: AM629_08650
symbol: fecD
gene_biotype: protein_coding
description:
  Iron-dicitrate transporter subunit FecD; Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter), as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter; Derived by automated computational an [...]


ensembl_gene_id: AM629_08660
symbol: KOY62408.1
gene_biotype: protein_coding
description:
  Phosphoglycerol transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08665
symbol: malG
gene_biotype: protein_coding
description:
  Maltose transporter permease; With MalKFE is involved in the transport of maltose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08670
symbol: malF
gene_biotype: protein_coding
description:
  With MalKGE is involved in maltose transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08675
symbol: malE
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.


ensembl_gene_id: AM629_08680
symbol: malK
gene_biotype: protein_coding
description:
  Maltose/maltodextrin transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08685
symbol: lamB
gene_biotype: protein_coding
description:
  Maltoporin; Porin involved in the transport of maltose and maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08690
symbol: malM
gene_biotype: protein_coding
description:
  Maltose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08710
symbol: waaB
gene_biotype: protein_coding
description:
  UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08730
symbol: KOY62421.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08770
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08775
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08780
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08785
symbol: rplJ
gene_biotype: protein_coding
description:
  Binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08790
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08795
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: AM629_08800
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antiterminator NusG; Modulates Rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08805
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08870
symbol: KOY62334.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08875
symbol: fliR
gene_biotype: protein_coding
description:
  FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08880
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; With proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08885
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: AM629_08890
symbol: fliO
gene_biotype: protein_coding
description:
  Flagellar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08895
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08900
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; With FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08905
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08910
symbol: KOY62341.1
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08915
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis chaperone; Rod/hook and filament chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08925
symbol: fliH
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08930
symbol: fliG
gene_biotype: protein_coding
description:
  One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08935
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08940
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08950
symbol: fliT
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus.


ensembl_gene_id: AM629_08955
symbol: fliS
gene_biotype: protein_coding
description:
  Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08960
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar cap protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: AM629_08965
symbol: KOY62352.1
gene_biotype: protein_coding
description:
  Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08970
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: AM629_08975
symbol: fliZ
gene_biotype: protein_coding
description:
  Flagella biosynthesis protein FliZ; Expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08980
symbol: putA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: AM629_08985
symbol: putP
gene_biotype: protein_coding
description:
  Proline:sodium symporter PutP; Involved in the sodium dependent uptake of proline; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08990
symbol: wrbA
gene_biotype: protein_coding
description:
  NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_08995
symbol: cycA
gene_biotype: protein_coding
description:
  Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09030
symbol: KOY62362.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09035
symbol: dsdC
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the synthesis and expression of the dsdXA operon and dadA gene; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09040
symbol: dsdX
gene_biotype: protein_coding
description:
  DsdX permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09045
symbol: dsdA
gene_biotype: protein_coding
description:
  D-serine dehydratase; Catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09055
symbol: KOY62367.1
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09075
symbol: KOY62370.1
gene_biotype: protein_coding
description:
  Colicin immunity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09090
symbol: thiH
gene_biotype: protein_coding
description:
  In Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09095
symbol: KOY62373.1
gene_biotype: protein_coding
description:
  Thiazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09100
symbol: thiS
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09110
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: AM629_09115
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: AM629_09120
symbol: KOY62274.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09130
symbol: KOY62276.1
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09135
symbol: KOY62277.1
gene_biotype: protein_coding
description:
  Pyoverdine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09140
symbol: KOY62278.1
gene_biotype: protein_coding
description:
  Paerucumarin biosynthesis protein PvcA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09145
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: AM629_09150
symbol: lolC
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolC; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09155
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein ABC transporter ATP-binding protein; Outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09160
symbol: lolE
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolE; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09165
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09175
symbol: KOY62285.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L16 arginine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09180
symbol: phoQ
gene_biotype: protein_coding
description:
  Sensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09185
symbol: phoP
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09190
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09195
symbol: hflD
gene_biotype: protein_coding
description:
  Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09200
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridylase; Catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09205
symbol: KOY62290.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09210
symbol: rluE
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09215
symbol: KOY62291.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09225
symbol: KOY62293.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09230
symbol: KOY62294.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09245
symbol: KOY62297.1
gene_biotype: protein_coding
description:
  Aromatic amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09250
symbol: KOY62298.1
gene_biotype: protein_coding
description:
  Sugar phosphatase; YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09270
symbol: KOY62322.1
gene_biotype: protein_coding
description:
  Phospholipid:lipid A palmitoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09280
symbol: thiD
gene_biotype: protein_coding
description:
  Catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09285
symbol: fbaB
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09310
symbol: baeR
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09320
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09340
symbol: ppx
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09345
symbol: ppk1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09350
symbol: speG
gene_biotype: protein_coding
description:
  Spermidine acetyltransferase; Catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09355
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09360
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09365
symbol: upp
gene_biotype: protein_coding
description:
  Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09375
symbol: mdh
gene_biotype: protein_coding
description:
  Oxidizes malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09380
symbol: argR
gene_biotype: protein_coding
description:
  Regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09385
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09390
symbol: KOY62226.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09395
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: AM629_09400
symbol: KOY62228.1
gene_biotype: protein_coding
description:
  Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09405
symbol: KOY62229.1
gene_biotype: protein_coding
description:
  Translocation and assembly module TamB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09415
symbol: msrA
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase A; This stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09435
symbol: cysQ
gene_biotype: protein_coding
description:
  Adenosine-3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: AM629_09440
symbol: KOY62236.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09450
symbol: KOY62238.1
gene_biotype: protein_coding
description:
  Carbamoyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09465
symbol: rplI
gene_biotype: protein_coding
description:
  50S ribosomal protein L9; In Escherichia coli this protein is wrapped around the base of the L1 stalk; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09470
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09475
symbol: priB
gene_biotype: protein_coding
description:
  Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: AM629_09480
symbol: rpsF
gene_biotype: protein_coding
description:
  30S ribosomal protein S6; Binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09485
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.


ensembl_gene_id: AM629_09490
symbol: rnr
gene_biotype: protein_coding
description:
  Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily.


ensembl_gene_id: AM629_09495
symbol: nsrR
gene_biotype: protein_coding
description:
  Transcriptional repressor NsrR; Negatively regulates the transcription of genes upregulated by nitrosative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09500
symbol: KOY62246.1
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09505
symbol: hflC
gene_biotype: protein_coding
description:
  Cell division protein FtsH; With HflK inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09510
symbol: hflK
gene_biotype: protein_coding
description:
  Cell division protein FtsH; With HflC inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09515
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; Involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09520
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein; HF-I, host factor for RNA phage Q beta replication; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09525
symbol: miaA
gene_biotype: protein_coding
description:
  IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09530
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: AM629_09540
symbol: tsaE
gene_biotype: protein_coding
description:
  ADP-binding protein; Needed for nucleoid integrity; possibly involved in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09545
symbol: queG
gene_biotype: protein_coding
description:
  [Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09570
symbol: KOY62258.1
gene_biotype: protein_coding
description:
  Antitoxin, Phd family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09595
symbol: KOY62260.1
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-5' exoribonuclease specific for small oligoribonuclotides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09600
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: AM629_09605
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09610
symbol: mscM
gene_biotype: protein_coding
description:
  Mechanosensitive channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09705
symbol: tssM
gene_biotype: protein_coding
description:
  Type VI secretion protein IcmF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09720
symbol: KOY62181.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09725
symbol: tssH-2
gene_biotype: protein_coding
description:
  Clp protease ClpV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09745
symbol: tagH
gene_biotype: protein_coding
description:
  Phosphopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09760
symbol: tssE-2
gene_biotype: protein_coding
description:
  Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09780
symbol: KOY62193.1
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09785
symbol: gorA
gene_biotype: protein_coding
description:
  Catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09800
symbol: KOY62196.1
gene_biotype: protein_coding
description:
  Deaminase; Metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09805
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein MobB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09810
symbol: srkA
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: AM629_09815
symbol: dsbA
gene_biotype: protein_coding
description:
  Protein disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09820
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: AM629_09825
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: AM629_09840
symbol: KOY62201.1
gene_biotype: protein_coding
description:
  Anthranilate synthase; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09845
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: AM629_09850
symbol: crp
gene_biotype: protein_coding
description:
  Crp/Fnr family transcriptional regulator; cAMP receptor protein; complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09860
symbol: KOY62205.1
gene_biotype: protein_coding
description:
  Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09865
symbol: KOY62206.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0270 family.


ensembl_gene_id: AM629_09880
symbol: murP
gene_biotype: protein_coding
description:
  PTS N-acetylmuramic acid transporter subunit IIBC; Belongs to PEP-dependent PTS system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; requires crr-encoded enzyme IIA-glucose component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09885
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid-6-phosphate etherase; Catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_09940
symbol: KOY62165.1
gene_biotype: protein_coding
description:
  Glutamine--scyllo-inositol aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: AM629_09960
symbol: KOY62137.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AM629_09985
symbol: KOY62166.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10000
symbol: KOY62142.1
gene_biotype: protein_coding
description:
  Peptide/polyketide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10035
symbol: KOY62149.1
gene_biotype: protein_coding
description:
  Polyurethanase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10070
symbol: KOY62155.1
gene_biotype: protein_coding
description:
  Immunity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10150
symbol: KOY62081.1
gene_biotype: protein_coding
description:
  DNA-invertase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10155
symbol: KOY62082.1
gene_biotype: protein_coding
description:
  Phage repressor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10170
symbol: KOY62085.1
gene_biotype: protein_coding
description:
  Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10235
symbol: KOY62098.1
gene_biotype: protein_coding
description:
  Late control protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10240
symbol: KOY62099.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; In E. coli K-12 this is in prophage P2 remnant; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10245
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: AM629_10270
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: AM629_10275
symbol: recF
gene_biotype: protein_coding
description:
  Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: AM629_10280
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10285
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10290
symbol: rpmH
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; In Escherichia coli transcription of this gene is enhanced by polyamines; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10295
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: AM629_10300
symbol: yidC
gene_biotype: protein_coding
description:
  Insertase; Functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10305
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: AM629_10315
symbol: KOY62114.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10330
symbol: KOY62116.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10380
symbol: fdhE
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Required for the formation of active formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10385
symbol: KOY62125.1
gene_biotype: protein_coding
description:
  Selenocysteine synthase; Catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10390
symbol: selB
gene_biotype: protein_coding
description:
  selenocysteinyl-tRNA-specific translation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10395
symbol: KOY62127.1
gene_biotype: protein_coding
description:
  Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10405
symbol: KOY62129.1
gene_biotype: protein_coding
description:
  Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: AM629_10425
symbol: KOY62035.1
gene_biotype: protein_coding
description:
  Membrane-associated sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10430
symbol: actP
gene_biotype: protein_coding
description:
  Acetate permease; Member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10440
symbol: acs
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. Enables the cell to use acetate during aerobic growth to generate energy via the TCA cycle, and biosynthetic compounds via the glyoxylate shunt. Acetylat [...]


ensembl_gene_id: AM629_10445
symbol: sodA
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: AM629_10450
symbol: KOY62040.1
gene_biotype: protein_coding
description:
  6-N-hydroxylaminopurine resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10460
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10465
symbol: KOY62042.1
gene_biotype: protein_coding
description:
  Catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10470
symbol: KOY62043.1
gene_biotype: protein_coding
description:
  Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10475
symbol: KOY62044.1
gene_biotype: protein_coding
description:
  DNA adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10485
symbol: aroB
gene_biotype: protein_coding
description:
  Catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10490
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10515
symbol: mrcA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1A; Bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10520
symbol: nudE
gene_biotype: protein_coding
description:
  Adenosine nucleotide hydrolase; ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10525
symbol: KOY62054.1
gene_biotype: protein_coding
description:
  Intracellular growth attenuator protein igaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10530
symbol: hslR
gene_biotype: protein_coding
description:
  Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10535
symbol: hslO
gene_biotype: protein_coding
description:
  Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: AM629_10540
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: AM629_10555
symbol: pulA
gene_biotype: protein_coding
description:
  Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: AM629_10570
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10575
symbol: KOY62063.1
gene_biotype: protein_coding
description:
  4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10595
symbol: pitA
gene_biotype: protein_coding
description:
  Phosphate transporter PitA; Involved in the transport of inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10600
symbol: uspB
gene_biotype: protein_coding
description:
  Universal stress protein UspB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10640
symbol: uspA
gene_biotype: protein_coding
description:
  Universal stress global response regulator UspA; Involved in resistance to DNA-damaging agents; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10645
symbol: KOY62076.1
gene_biotype: protein_coding
description:
  Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10650
symbol: rsmJ
gene_biotype: protein_coding
description:
  Methyltransferase; Predicted SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10670
symbol: KOY61989.1
gene_biotype: protein_coding
description:
  CDP-diglyceride synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10675
symbol: KOY61990.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10680
symbol: KOY61991.1
gene_biotype: protein_coding
description:
  Peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10690
symbol: KOY61993.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10695
symbol: KOY62033.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10700
symbol: ubiA-2
gene_biotype: protein_coding
description:
  UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10715
symbol: KOY61996.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10725
symbol: KOY61998.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0306 family.


ensembl_gene_id: AM629_10730
symbol: nrdG
gene_biotype: protein_coding
description:
  Activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10735
symbol: nrdD
gene_biotype: protein_coding
description:
  Ribonucleoside-triphosphate reductase; Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10740
symbol: KOY62001.1
gene_biotype: protein_coding
description:
  Has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10745
symbol: KOY62034.1
gene_biotype: protein_coding
description:
  Involved in the allosteric regulation of aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10750
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10760
symbol: argF
gene_biotype: protein_coding
description:
  Catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10775
symbol: KOY62006.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10780
symbol: KOY62007.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: AM629_10790
symbol: KOY62009.1
gene_biotype: protein_coding
description:
  Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10800
symbol: KOY62011.1
gene_biotype: protein_coding
description:
  valyl-tRNA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10805
symbol: KOY62012.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit chi; Binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10810
symbol: pepA
gene_biotype: protein_coding
description:
  Aminopeptidase; Catalyzes the removal of N-terminal amino acids preferably from various peptides; a cyteinylglycinase, transcription regulator and site-specific recombination factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10815
symbol: lptF
gene_biotype: protein_coding
description:
  Lipopolysaccharide ABC transporter permease; With LptBGC is involved in lipopolysaccharide export; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10820
symbol: lptG
gene_biotype: protein_coding
description:
  With LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10840
symbol: KOY62017.1
gene_biotype: protein_coding
description:
  Peptide deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10845
symbol: KOY62018.1
gene_biotype: protein_coding
description:
  BamHI control element; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10885
symbol: rihB
gene_biotype: protein_coding
description:
  Ribonucleoside hydrolase; Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IUNH family.


ensembl_gene_id: AM629_10905
symbol: KOY62030.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10945
symbol: hdfR
gene_biotype: protein_coding
description:
  Transcriptional regulator HdfR; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10955
symbol: KOY61947.1
gene_biotype: protein_coding
description:
  Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10960
symbol: KOY61948.1
gene_biotype: protein_coding
description:
  Acetolactate synthase catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10965
symbol: ilvM
gene_biotype: protein_coding
description:
  Acetolactate synthase 2 regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_10970
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AM629_10975
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: AM629_10980
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: AM629_10985
symbol: emrB-2
gene_biotype: protein_coding
description:
  Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11005
symbol: KOY61957.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: AM629_11025
symbol: KOY61961.1
gene_biotype: protein_coding
description:
  LuxE family acyl-protein synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11030
symbol: KOY61962.1
gene_biotype: protein_coding
description:
  Potassium uptake trka-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11040
symbol: ilvY
gene_biotype: protein_coding
description:
  Transcriptional regulator; Participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11045
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11050
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: AM629_11055
symbol: gppA
gene_biotype: protein_coding
description:
  Guanosine polyphosphate pyrophosphohydrolase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.


ensembl_gene_id: AM629_11060
symbol: rhlB
gene_biotype: protein_coding
description:
  Enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11065
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11070
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11075
symbol: wecA
gene_biotype: protein_coding
description:
  UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11080
symbol: wzzE
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein; Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11085
symbol: KOY61972.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11090
symbol: wecC
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11095
symbol: rffG
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: AM629_11100
symbol: rfbA-2
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11105
symbol: rffC
gene_biotype: protein_coding
description:
  TDP-fucosamine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11110
symbol: rffA
gene_biotype: protein_coding
description:
  TDP-4-oxo-6-deoxy-D-glucose aminotransferase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: AM629_11115
symbol: wzxE
gene_biotype: protein_coding
description:
  O-antigen translocase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.


ensembl_gene_id: AM629_11120
symbol: wecF
gene_biotype: protein_coding
description:
  4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.


ensembl_gene_id: AM629_11125
symbol: wzyE
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.


ensembl_gene_id: AM629_11130
symbol: rffM
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11135
symbol: KOY61982.1
gene_biotype: protein_coding
description:
  D-alanine/D-serine/glycine permease; Involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11160
symbol: hemY
gene_biotype: protein_coding
description:
  Protoheme IX biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11165
symbol: hemX
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11170
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: AM629_11175
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: AM629_11215
symbol: KOY61912.1
gene_biotype: protein_coding
description:
  FAD-containing monooxygenase EthA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11260
symbol: KOY61918.1
gene_biotype: protein_coding
description:
  Hemolysin co-regulated protein (Hcp); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11280
symbol: pglZ
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11285
symbol: pglX
gene_biotype: protein_coding
description:
  Type II restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11335
symbol: KOY61931.1
gene_biotype: protein_coding
description:
  Usher protein FimD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11345
symbol: KOY61933.1
gene_biotype: protein_coding
description:
  Protein bax; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11350
symbol: KOY61944.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11370
symbol: gntU
gene_biotype: protein_coding
description:
  Gluconate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11375
symbol: gntK
gene_biotype: protein_coding
description:
  Gluconate kinase; Thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11390
symbol: suhB
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11395
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11410
symbol: iscU
gene_biotype: protein_coding
description:
  Scaffolding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11415
symbol: iscA
gene_biotype: protein_coding
description:
  Forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11420
symbol: hscB
gene_biotype: protein_coding
description:
  J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11425
symbol: hscA
gene_biotype: protein_coding
description:
  Chaperone protein HscA; Involved in the maturation of iron-sulfur cluster-containing proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11440
symbol: pepB
gene_biotype: protein_coding
description:
  Aminopeptidase; Catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11445
symbol: KOY61871.1
gene_biotype: protein_coding
description:
  Enhances serine sensitivity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11450
symbol: KOY61872.1
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11460
symbol: pbpC
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Penicillin-insensitive transglycosylase/transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11465
symbol: KOY61904.1
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11470
symbol: trmG
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: AM629_11480
symbol: rodZ
gene_biotype: protein_coding
description:
  Cytoskeletal protein RodZ; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis. Belongs to the RodZ family.


ensembl_gene_id: AM629_11485
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11490
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11500
symbol: bamB
gene_biotype: protein_coding
description:
  Membrane biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11505
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: AM629_11520
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11535
symbol: KOY61888.1
gene_biotype: protein_coding
description:
  RpoE-regulated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11540
symbol: KOY61889.1
gene_biotype: protein_coding
description:
  Thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11545
symbol: cysT
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11550
symbol: cysW
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11560
symbol: cysM
gene_biotype: protein_coding
description:
  Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11565
symbol: KOY61894.1
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11570
symbol: ptsI
gene_biotype: protein_coding
description:
  Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11575
symbol: ptsH
gene_biotype: protein_coding
description:
  PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11585
symbol: cysZ
gene_biotype: protein_coding
description:
  Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11590
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: AM629_11595
symbol: ligA
gene_biotype: protein_coding
description:
  Aromatic ring-opening dioxygenase LigA; This protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11600
symbol: KOY61901.1
gene_biotype: protein_coding
description:
  Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11620
symbol: gltX
gene_biotype: protein_coding
description:
  glutamine--tRNA ligase; Catalyzes a two-step reaction, first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11655
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.


ensembl_gene_id: AM629_11670
symbol: KOY61815.1
gene_biotype: protein_coding
description:
  NAD synthetase; NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11675
symbol: glrR
gene_biotype: protein_coding
description:
  Response regulator GlrR; With GlrK is part of a two-component signal transduction system regulating glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11685
symbol: KOY61858.1
gene_biotype: protein_coding
description:
  Histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11700
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: AM629_11705
symbol: mltF
gene_biotype: protein_coding
description:
  Murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11710
symbol: KOY61821.1
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Biodegradative; catalyzes the formation of agmatine from arginine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11715
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11740
symbol: KOY61825.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11745
symbol: acpS
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11750
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Involved in the de novo synthesis of pyridoxine (Vitamin B6); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11755
symbol: recO
gene_biotype: protein_coding
description:
  Involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11765
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11770
symbol: lepB-2
gene_biotype: protein_coding
description:
  Signal peptidase I; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11775
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: AM629_11780
symbol: rseC
gene_biotype: protein_coding
description:
  SoxR reducing system protein RseC; Involved in the reduction of the SoxR iron-sulfur cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11785
symbol: rseB
gene_biotype: protein_coding
description:
  Anti-sigma E factor; Periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11790
symbol: rseA
gene_biotype: protein_coding
description:
  Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11795
symbol: rpoE
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11805
symbol: KOY61838.1
gene_biotype: protein_coding
description:
  tRNA (adenine-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: AM629_11810
symbol: srmB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.


ensembl_gene_id: AM629_11875
symbol: KOY61851.1
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11900
symbol: KOY61856.1
gene_biotype: protein_coding
description:
  Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11915
symbol: ilvI
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11920
symbol: ilvH
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 regulatory subunit; With IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11925
symbol: cra
gene_biotype: protein_coding
description:
  Transcriptional regulator; Binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11930
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11935
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11940
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: AM629_11945
symbol: KOY61774.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Penicillin-binding protein 3; transpeptidase involved in septal peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11950
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11955
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: AM629_11960
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11965
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: AM629_11970
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Integral membrane protein involved in stabilizing FstZ ring during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11975
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: AM629_11980
symbol: murC
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_11985
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: AM629_11995
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12000
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12005
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12015
symbol: secM
gene_biotype: protein_coding
description:
  Secretion protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.


ensembl_gene_id: AM629_12020
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not es [...]


ensembl_gene_id: AM629_12030
symbol: yacG
gene_biotype: protein_coding
description:
  Inhibits supercoiling by DNA gyrase by binding to the GyrB subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12035
symbol: zapD
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: AM629_12040
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: AM629_12045
symbol: hofC
gene_biotype: protein_coding
description:
  Type IV pilin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12050
symbol: gspE
gene_biotype: protein_coding
description:
  Transporter HofB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12060
symbol: nadC
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12070
symbol: ampE
gene_biotype: protein_coding
description:
  Transcriptional regulator; Involved in regulation of beta-lactamase; putative signaling protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12130
symbol: pdhR
gene_biotype: protein_coding
description:
  Transcriptional regulator PdhR; Activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12135
symbol: aceE
gene_biotype: protein_coding
description:
  E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12140
symbol: aceF
gene_biotype: protein_coding
description:
  E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12145
symbol: lpdA
gene_biotype: protein_coding
description:
  E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12150
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12170
symbol: dnaB
gene_biotype: protein_coding
description:
  DNA helicase; Unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12175
symbol: alr
gene_biotype: protein_coding
description:
  Converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12180
symbol: KOY61730.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12195
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: AM629_12205
symbol: KOY61734.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12210
symbol: KOY61735.1
gene_biotype: protein_coding
description:
  DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12220
symbol: KOY61737.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12240
symbol: KOY61741.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: AM629_12245
symbol: metR
gene_biotype: protein_coding
description:
  Homocysteine-binding; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12250
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: AM629_12255
symbol: KOY61744.1
gene_biotype: protein_coding
description:
  Intradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12260
symbol: pcp
gene_biotype: protein_coding
description:
  Pyrrolidone-carboxylate peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12265
symbol: KOY61746.1
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: AM629_12270
symbol: KOY61747.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12275
symbol: KOY61766.1
gene_biotype: protein_coding
description:
  Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12280
symbol: rmuC
gene_biotype: protein_coding
description:
  Recombinase RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12285
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: AM629_12295
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; An Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12300
symbol: KOY61751.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12305
symbol: tatB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12310
symbol: tatC
gene_biotype: protein_coding
description:
  With TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12315
symbol: hemB
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12325
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12330
symbol: fre
gene_biotype: protein_coding
description:
  NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12335
symbol: fadA
gene_biotype: protein_coding
description:
  3-ketoacyl-CoA thiolase; FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12340
symbol: fadB
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12345
symbol: pepQ
gene_biotype: protein_coding
description:
  Proline dipeptidase; Catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12355
symbol: trkH
gene_biotype: protein_coding
description:
  Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12360
symbol: hemG
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12380
symbol: KOY61688.1
gene_biotype: protein_coding
description:
  Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12385
symbol: menE
gene_biotype: protein_coding
description:
  O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12390
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: AM629_12395
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphthoic acid synthetase; Catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12400
symbol: menH
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12405
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: AM629_12420
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit N; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12425
symbol: nuoM
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12430
symbol: nuoL
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit L; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12435
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit K; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12440
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12450
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12455
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: AM629_12460
symbol: nuoF
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: AM629_12465
symbol: nuoE
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12470
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: AM629_12480
symbol: KOY61706.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12490
symbol: KOY61708.1
gene_biotype: protein_coding
description:
  Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12495
symbol: KOY61709.1
gene_biotype: protein_coding
description:
  5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12500
symbol: KOY61710.1
gene_biotype: protein_coding
description:
  Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12510
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: AM629_12515
symbol: KOY61713.1
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12540
symbol: astE
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12545
symbol: astB
gene_biotype: protein_coding
description:
  N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: AM629_12550
symbol: astD
gene_biotype: protein_coding
description:
  A high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12555
symbol: astA
gene_biotype: protein_coding
description:
  Arginine N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12560
symbol: KOY61720.1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12570
symbol: gmhB
gene_biotype: protein_coding
description:
  D,D-heptose 1,7-bisphosphate phosphatase; Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12575
symbol: metN
gene_biotype: protein_coding
description:
  DL-methionine transporter ATP-binding subunit; Part of the metNIQ transport system for methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12580
symbol: metI
gene_biotype: protein_coding
description:
  DL-methionine transporter permease subunit; Part of the MetNIQ methionine uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12585
symbol: metQ
gene_biotype: protein_coding
description:
  DL-methionine transporter substrate-binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12595
symbol: tsaA
gene_biotype: protein_coding
description:
  tRNA (adenine(37)-N6)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12600
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: AM629_12605
symbol: nlpE
gene_biotype: protein_coding
description:
  Copper homeostasis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12610
symbol: rof
gene_biotype: protein_coding
description:
  Rho-binding antiterminator; Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12615
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine ligase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12620
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12625
symbol: dnaE
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12635
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: AM629_12640
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12650
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O- (hydroxytetradecanoyl)glucosamine using 3-hydroxytetradecanoyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: AM629_12660
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane assembly protein; Part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12665
symbol: rseP
gene_biotype: protein_coding
description:
  Zinc metallopeptidase RseP; Catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12675
symbol: ispU
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: AM629_12680
symbol: ispC
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12685
symbol: frr
gene_biotype: protein_coding
description:
  Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12690
symbol: pyrH
gene_biotype: protein_coding
description:
  Uridylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12695
symbol: tsf
gene_biotype: protein_coding
description:
  EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12700
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12705
symbol: map-2
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: AM629_12710
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: AM629_12715
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12725
symbol: KOY61669.1
gene_biotype: protein_coding
description:
  Flavodoxin; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12745
symbol: truC
gene_biotype: protein_coding
description:
  Catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AM629_12755
symbol: syd
gene_biotype: protein_coding
description:
  Secretion protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.


ensembl_gene_id: AM629_12760
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


