# geneInfo

ensembl_gene_id: HMPREF9695_00108
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HMPREF9695_00123
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: HMPREF9695_00130
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: HMPREF9695_00132
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: HMPREF9695_00151
symbol: EKS41059.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: HMPREF9695_00152
symbol: crcB
gene_biotype: protein_coding
description:
  crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: HMPREF9695_00162
symbol: adc
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.


ensembl_gene_id: HMPREF9695_00190
symbol: EKS41098.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: HMPREF9695_00192
symbol: EKS41100.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: HMPREF9695_00193
symbol: EKS41101.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: HMPREF9695_00197
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF9695_00242
symbol: EKS41150.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF9695_00275
symbol: hemF
gene_biotype: protein_coding
description:
  coproporphyrinogen-III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: HMPREF9695_00277
symbol: queE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: HMPREF9695_00279
symbol: EKS41187.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HMPREF9695_00280
symbol: EKS41188.1
gene_biotype: protein_coding
description:
  Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HMPREF9695_00290
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HMPREF9695_00297
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF9695_00309
symbol: EKS41217.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: HMPREF9695_00340
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: HMPREF9695_00365
symbol: EKS41273.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: HMPREF9695_00366
symbol: EKS41274.1
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: HMPREF9695_00379
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: HMPREF9695_00388
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMPREF9695_00399
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMPREF9695_00552
symbol: ku
gene_biotype: protein_coding
description:
  Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: HMPREF9695_00645
symbol: clpB
gene_biotype: protein_coding
description:
  Chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMPREF9695_00718
symbol: EKS41626.1
gene_biotype: protein_coding
description:
  Alternative cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: HMPREF9695_00724
symbol: EKS41632.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: HMPREF9695_00725
symbol: EKS41633.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMPREF9695_00727
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: HMPREF9695_00728
symbol: EKS41636.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: HMPREF9695_00836
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF9695_00890
symbol: hmgA
gene_biotype: protein_coding
description:
  Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.


ensembl_gene_id: HMPREF9695_00914
symbol: EKS41822.1
gene_biotype: protein_coding
description:
  Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: HMPREF9695_00937
symbol: EKS41845.1
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: HMPREF9695_00938
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: HMPREF9695_00978
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: HMPREF9695_01044
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HMPREF9695_01048
symbol: EKS41956.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF9695_01061
symbol: dnaE2
gene_biotype: protein_coding
description:
  Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: HMPREF9695_01064
symbol: EKS41972.1
gene_biotype: protein_coding
description:
  CzcA family heavy metal efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: HMPREF9695_01085
symbol: EKS41993.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: HMPREF9695_01134
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: HMPREF9695_01140
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: HMPREF9695_01142
symbol: EKS42050.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: HMPREF9695_01165
symbol: EKS42073.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: HMPREF9695_01166
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: HMPREF9695_01167
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: HMPREF9695_01186
symbol: EKS42094.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: HMPREF9695_01284
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: HMPREF9695_01289
symbol: EKS42197.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HMPREF9695_01290
symbol: EKS42198.1
gene_biotype: protein_coding
description:
  Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: HMPREF9695_01294
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: HMPREF9695_01297
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: HMPREF9695_01302
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: HMPREF9695_01309
symbol: EKS42217.1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase/homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: HMPREF9695_01313
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: HMPREF9695_01317
symbol: kup
gene_biotype: protein_coding
description:
  Potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: HMPREF9695_01321
symbol: EKS42229.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: HMPREF9695_01331
symbol: EKS42239.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: HMPREF9695_01385
symbol: EKS39424.1
gene_biotype: protein_coding
description:
  Urea ABC transporter, permease UrtB; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF9695_01386
symbol: EKS39425.1
gene_biotype: protein_coding
description:
  Urea ABC transporter, permease UrtC; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF9695_01394
symbol: EKS39433.1
gene_biotype: protein_coding
description:
  drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter; Belongs to the major facilitator superfamily.


ensembl_gene_id: HMPREF9695_01404
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: HMPREF9695_01406
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: HMPREF9695_01429
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate import ATP-binding protein PhnC 2; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: HMPREF9695_01437
symbol: EKS39476.1
gene_biotype: protein_coding
description:
  Protein phnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: HMPREF9695_01445
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: HMPREF9695_01446
symbol: pqqD
gene_biotype: protein_coding
description:
  Coenzyme PQQ synthesis protein D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.


ensembl_gene_id: HMPREF9695_01447
symbol: pqqE
gene_biotype: protein_coding
description:
  Coenzyme PQQ synthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: HMPREF9695_01458
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.


ensembl_gene_id: HMPREF9695_01489
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: HMPREF9695_01491
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: HMPREF9695_01497
symbol: EKS39536.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: HMPREF9695_01518
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: HMPREF9695_01524
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: HMPREF9695_01531
symbol: der
gene_biotype: protein_coding
description:
  GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF9695_01537
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF9695_01539
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF9695_01543
symbol: EKS39582.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF9695_01550
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF9695_01559
symbol: EKS39598.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF9695_01561
symbol: EKS39600.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF9695_01562
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: HMPREF9695_01568
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF9695_01569
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase 2; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: HMPREF9695_01573
symbol: pepA
gene_biotype: protein_coding
description:
  Hypothetical protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: HMPREF9695_01580
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: HMPREF9695_01589
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: HMPREF9695_01598
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: HMPREF9695_01601
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9695_01659
symbol: EKS39698.1
gene_biotype: protein_coding
description:
  Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: HMPREF9695_01667
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: HMPREF9695_01671
symbol: EKS39710.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF9695_01673
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: HMPREF9695_01680
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF9695_01694
symbol: EKS39733.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: HMPREF9695_01702
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: HMPREF9695_01718
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMPREF9695_01754
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: HMPREF9695_01813
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF9695_01816
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: HMPREF9695_01819
symbol: ispDF
gene_biotype: protein_coding
description:
  Bifunctional enzyme ispD/ispF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: HMPREF9695_01820
symbol: EKS39859.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF9695_01822
symbol: ntrC
gene_biotype: protein_coding
description:
  Nitrogen assimilation regulatory protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: HMPREF9695_01826
symbol: hfq
gene_biotype: protein_coding
description:
  Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: HMPREF9695_01827
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: HMPREF9695_01829
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: HMPREF9695_01846
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.


ensembl_gene_id: HMPREF9695_01871
symbol: pxpA
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: HMPREF9695_01882
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HMPREF9695_01899
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF9695_01903
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: HMPREF9695_01904
symbol: glmU
gene_biotype: protein_coding
description:
  glmU protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: HMPREF9695_01917
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: HMPREF9695_01918
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMPREF9695_01919
symbol: EKS38079.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HMPREF9695_01921
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMPREF9695_01923
symbol: kup-3
gene_biotype: protein_coding
description:
  Hypothetical protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: HMPREF9695_01924
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9695_01926
symbol: EKS38086.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: HMPREF9695_01928
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF9695_01939
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate-tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: HMPREF9695_01943
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF9695_01944
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF9695_01945
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: HMPREF9695_01951
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: HMPREF9695_01952
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMPREF9695_01953
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: HMPREF9695_01955
symbol: tatA
gene_biotype: protein_coding
description:
  TatA/E family twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: HMPREF9695_01956
symbol: EKS38116.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF9695_01957
symbol: EKS38117.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF9695_01963
symbol: EKS38123.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: HMPREF9695_01980
symbol: EKS38140.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: HMPREF9695_01981
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: HMPREF9695_01985
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMPREF9695_01992
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMPREF9695_01996
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: HMPREF9695_01998
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: HMPREF9695_02000
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: HMPREF9695_02006
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HMPREF9695_02015
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HMPREF9695_02017
symbol: EKS38177.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase 2; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMPREF9695_02018
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF9695_02020
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF9695_02026
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein LolD 1; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: HMPREF9695_02028
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.


ensembl_gene_id: HMPREF9695_02035
symbol: nuoN
gene_biotype: protein_coding
description:
  Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: HMPREF9695_02038
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: HMPREF9695_02039
symbol: EKS38199.1
gene_biotype: protein_coding
description:
  Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HMPREF9695_02040
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HMPREF9695_02041
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: HMPREF9695_02042
symbol: EKS38202.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone), G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: HMPREF9695_02043
symbol: EKS38203.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: HMPREF9695_02047
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: HMPREF9695_02048
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: HMPREF9695_02049
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HMPREF9695_02050
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: HMPREF9695_02055
symbol: EKS38215.1
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: HMPREF9695_02059
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMPREF9695_02060
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMPREF9695_02067
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF9695_02069
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF9695_02079
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF9695_02130
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: HMPREF9695_02131
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMPREF9695_02132
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HMPREF9695_02138
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: HMPREF9695_02140
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF9695_02145
symbol: EKS38305.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: HMPREF9695_02146
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: HMPREF9695_02147
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMPREF9695_02153
symbol: bpt
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: HMPREF9695_02154
symbol: mntH
gene_biotype: protein_coding
description:
  Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: HMPREF9695_02157
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: HMPREF9695_02161
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF9695_02162
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF9695_02164
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF9695_02165
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: HMPREF9695_02166
symbol: EKS38326.1
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF9695_02167
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMPREF9695_02171
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMPREF9695_02172
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HMPREF9695_02180
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMPREF9695_02182
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMPREF9695_02184
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMPREF9695_02188
symbol: EKS38348.1
gene_biotype: protein_coding
description:
  RNAse H-fold protein YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HMPREF9695_02195
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF9695_02203
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF9695_02204
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: HMPREF9695_02216
symbol: dinB
gene_biotype: protein_coding
description:
  Hypothetical protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: HMPREF9695_02227
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adapter protein ClpS 2; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: HMPREF9695_02320
symbol: EKS38480.1
gene_biotype: protein_coding
description:
  Zinc-binding alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: HMPREF9695_02326
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9695_02327
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF9695_02328
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF9695_02329
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF9695_02330
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF9695_02331
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF9695_02333
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF9695_02334
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF9695_02335
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF9695_02336
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF9695_02337
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: HMPREF9695_02338
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF9695_02339
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMPREF9695_02340
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF9695_02341
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMPREF9695_02343
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF9695_02344
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF9695_02345
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF9695_02346
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF9695_02347
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF9695_02348
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMPREF9695_02350
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: HMPREF9695_02351
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF9695_02352
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF9695_02353
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HMPREF9695_02354
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF9695_02355
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF9695_02363
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9695_02365
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF9695_02366
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF9695_02371
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF9695_02372
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF9695_02373
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF9695_02374
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: HMPREF9695_02505
symbol: EKS36087.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF9695_02519
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF9695_02527
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: HMPREF9695_02531
symbol: EKS36113.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: HMPREF9695_02533
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: HMPREF9695_02578
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin 2; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF9695_02579
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin 2; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF9695_02633
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF9695_02648
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: HMPREF9695_02649
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: HMPREF9695_02651
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...]


ensembl_gene_id: HMPREF9695_02652
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase A; Belongs to the SAICAR synthetase family.


ensembl_gene_id: HMPREF9695_02655
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: HMPREF9695_02658
symbol: EKS36240.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: HMPREF9695_02662
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF9695_02664
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: HMPREF9695_02665
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: HMPREF9695_02666
symbol: recA
gene_biotype: protein_coding
description:
  Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF9695_02697
symbol: EKS36279.1
gene_biotype: protein_coding
description:
  Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: HMPREF9695_02713
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: HMPREF9695_02718
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: HMPREF9695_02722
symbol: EKS36304.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: HMPREF9695_02732
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: HMPREF9695_02734
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: HMPREF9695_02782
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: HMPREF9695_02785
symbol: EKS36367.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: HMPREF9695_02825
symbol: hldE
gene_biotype: protein_coding
description:
  hldE protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: HMPREF9695_02826
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: HMPREF9695_02847
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: HMPREF9695_02848
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF9695_02862
symbol: fcl
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: HMPREF9695_02920
symbol: EKS36502.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: HMPREF9695_02948
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: HMPREF9695_02955
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HMPREF9695_02962
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMPREF9695_02969
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: HMPREF9695_02976
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase class II 1; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: HMPREF9695_03000
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HMPREF9695_03002
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF9695_03003
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: HMPREF9695_03011
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF9695_03013
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HMPREF9695_03014
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: HMPREF9695_03015
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF9695_03016
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: HMPREF9695_03019
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF9695_03043
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: HMPREF9695_03044
symbol: EKS36626.1
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).


ensembl_gene_id: HMPREF9695_03045
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: HMPREF9695_03064
symbol: EKS36646.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: HMPREF9695_03073
symbol: tam
gene_biotype: protein_coding
description:
  Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.


ensembl_gene_id: HMPREF9695_03116
symbol: frc
gene_biotype: protein_coding
description:
  Formyl-coenzyme A transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.


ensembl_gene_id: HMPREF9695_03166
symbol: EKS36748.1
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF9695_03171
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: HMPREF9695_03222
symbol: EKS36804.1
gene_biotype: protein_coding
description:
  RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF9695_03223
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: HMPREF9695_03231
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMPREF9695_03237
symbol: EKS36819.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMPREF9695_03238
symbol: EKS36820.1
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: HMPREF9695_03245
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HMPREF9695_03274
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: HMPREF9695_03291
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF9695_03292
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF9695_03293
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: HMPREF9695_03304
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF9695_03308
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: HMPREF9695_03319
symbol: EKS36901.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF9695_03320
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF9695_03341
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).


ensembl_gene_id: HMPREF9695_03388
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF9695_03389
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.


ensembl_gene_id: HMPREF9695_03412
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF9695_03443
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMPREF9695_03444
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: HMPREF9695_03445
symbol: aqpZ
gene_biotype: protein_coding
description:
  Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: HMPREF9695_03453
symbol: EKS37035.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: HMPREF9695_03499
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: HMPREF9695_03502
symbol: tadA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF9695_03515
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: HMPREF9695_03519
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: HMPREF9695_03528
symbol: groL-2
gene_biotype: protein_coding
description:
  Chaperonin 3; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF9695_03532
symbol: EKS37114.1
gene_biotype: protein_coding
description:
  Lactate permease (LctP) family transporter; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HMPREF9695_03543
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF9695_03546
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: HMPREF9695_03550
symbol: tolB
gene_biotype: protein_coding
description:
  Protein tolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: HMPREF9695_03553
symbol: tolQ
gene_biotype: protein_coding
description:
  Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: HMPREF9695_03565
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF9695_03566
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF9695_03567
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: HMPREF9695_03576
symbol: EKS37158.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9695_03578
symbol: EKS37160.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase 2; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: HMPREF9695_03604
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF9695_03606
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMPREF9695_03608
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: HMPREF9695_03611
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: HMPREF9695_03612
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: HMPREF9695_03614
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF9695_03615
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF9695_03616
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF9695_03621
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF9695_03622
symbol: EKS37204.1
gene_biotype: protein_coding
description:
  UPF0133 protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF9695_03634
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: HMPREF9695_03638
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF9695_03650
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: HMPREF9695_03658
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF9695_03664
symbol: EKS37246.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMPREF9695_03672
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF9695_03703
symbol: EKS37285.1
gene_biotype: protein_coding
description:
  Ferredoxin-2; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: HMPREF9695_03717
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: HMPREF9695_03720
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase xerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF9695_03721
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HMPREF9695_03723
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA 1; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: HMPREF9695_03725
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: HMPREF9695_03736
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: HMPREF9695_03740
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF9695_03744
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: HMPREF9695_03758
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HMPREF9695_03763
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein mutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF9695_03768
symbol: glnD
gene_biotype: protein_coding
description:
  [protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: HMPREF9695_03935
symbol: dinB-2
gene_biotype: protein_coding
description:
  DNA polymerase IV 2; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: HMPREF9695_03977
symbol: ndvA
gene_biotype: protein_coding
description:
  Beta-(1-2)glucan export ATP-binding/permease NdvA; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: HMPREF9695_03986
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF9695_03988
symbol: EKS34078.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, permease CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMPREF9695_04000
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: HMPREF9695_04014
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: HMPREF9695_04022
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein ureD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: HMPREF9695_04029
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF9695_04052
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: HMPREF9695_04056
symbol: EKS34146.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: HMPREF9695_04057
symbol: EKS34147.1
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: HMPREF9695_04060
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: HMPREF9695_04105
symbol: EKS34195.1
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: HMPREF9695_04111
symbol: rpmE
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.


ensembl_gene_id: HMPREF9695_04118
symbol: EKS34208.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: HMPREF9695_04158
symbol: EKS34248.1
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: HMPREF9695_04161
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: HMPREF9695_04163
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF9695_04184
symbol: atpE
gene_biotype: protein_coding
description:
  Hypothetical protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9695_04197
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: HMPREF9695_04198
symbol: EKS34288.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: HMPREF9695_04199
symbol: EKS34289.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: HMPREF9695_04205
symbol: EKS34295.1
gene_biotype: protein_coding
description:
  Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.


ensembl_gene_id: HMPREF9695_04226
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: HMPREF9695_04275
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: HMPREF9695_04281
symbol: EKS34371.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: HMPREF9695_04282
symbol: EKS34372.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF9695_04283
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: HMPREF9695_04298
symbol: aroK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HMPREF9695_04489
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF9695_04494
symbol: obg
gene_biotype: protein_coding
description:
  GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF9695_04495
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HMPREF9695_04496
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HMPREF9695_04498
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF9695_04499
symbol: rlmH
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HMPREF9695_04503
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: HMPREF9695_04505
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: HMPREF9695_04506
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: HMPREF9695_04507
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: HMPREF9695_04508
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF9695_04510
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: HMPREF9695_04511
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF9695_04512
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF9695_04518
symbol: EKS34608.1
gene_biotype: protein_coding
description:
  Hypothetical protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: HMPREF9695_04520
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA ligase [GDP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: HMPREF9695_04521
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: HMPREF9695_04522
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: HMPREF9695_04524
symbol: EKS34614.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: HMPREF9695_04534
symbol: EKS34624.1
gene_biotype: protein_coding
description:
  Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: HMPREF9695_04535
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: HMPREF9695_04540
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: HMPREF9695_04542
symbol: EKS34632.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: HMPREF9695_04544
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMPREF9695_04549
symbol: ugpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: HMPREF9695_04550
symbol: ugpC
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.


ensembl_gene_id: HMPREF9695_04556
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: HMPREF9695_04557
symbol: EKS34647.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF9695_04566
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMPREF9695_04570
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMPREF9695_04588
symbol: EKS34678.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMPREF9695_04595
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: HMPREF9695_04596
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF9695_04599
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HMPREF9695_04601
symbol: EKS34691.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: HMPREF9695_04603
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF9695_04604
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: HMPREF9695_04609
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: HMPREF9695_04611
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: HMPREF9695_04614
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH 1; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: HMPREF9695_04615
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: HMPREF9695_04616
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: HMPREF9695_04627
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMPREF9695_04629
symbol: EKS34719.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMPREF9695_04630
symbol: EKS34720.1
gene_biotype: protein_coding
description:
  Nucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMPREF9695_04631
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: HMPREF9695_04632
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: HMPREF9695_04633
symbol: grpE
gene_biotype: protein_coding
description:
  Protein grpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: HMPREF9695_04636
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and  [...]


ensembl_gene_id: HMPREF9695_04639
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9695_04642
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HMPREF9695_04643
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: HMPREF9695_04646
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF9695_04650
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HMPREF9695_04652
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: HMPREF9695_04653
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF9695_04677
symbol: EKS34767.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: HMPREF9695_04683
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: HMPREF9695_04688
symbol: tsaD
gene_biotype: protein_coding
description:
  glycoprotease/Kae1 family metallohydrolase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF9695_04712
symbol: folD
gene_biotype: protein_coding
description:
  FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF9695_04715
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: HMPREF9695_04727
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMPREF9695_04747
symbol: EKS34837.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: HMPREF9695_04748
symbol: EKS34838.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: HMPREF9695_04763
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: HMPREF9695_04768
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: HMPREF9695_04770
symbol: EKS34860.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: HMPREF9695_04772
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: HMPREF9695_04778
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: HMPREF9695_04780
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF9695_04781
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF9695_04784
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: HMPREF9695_04788
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: HMPREF9695_04791
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: HMPREF9695_04794
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: HMPREF9695_04795
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: HMPREF9695_04796
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HMPREF9695_04806
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HMPREF9695_04807
symbol: EKS34897.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: HMPREF9695_04808
symbol: EKS34898.1
gene_biotype: protein_coding
description:
  2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: HMPREF9695_04809
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: HMPREF9695_04811
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: HMPREF9695_04817
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: HMPREF9695_04823
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMPREF9695_04824
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF9695_04825
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF9695_04826
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF9695_04827
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF9695_04829
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF9695_04832
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HMPREF9695_04839
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: HMPREF9695_04846
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9695_04860
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9695_04861
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: HMPREF9695_04862
symbol: EKS34952.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMPREF9695_04863
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF9695_04884
symbol: ssuD
gene_biotype: protein_coding
description:
  Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.


ensembl_gene_id: HMPREF9695_04886
symbol: ssuB
gene_biotype: protein_coding
description:
  Aliphatic sulfonates import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF9695_04894
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: HMPREF9695_04895
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: HMPREF9695_04896
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


# pathwayInfo

id: CL:1001
description: Mixed, incl. Cell wall biogenesis/degradation, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1001_Mixed,_incl._Cell_wall_biogenesis/degradation,_and_Cell_division


id: CL:1002
description: Cell wall biogenesis/degradation, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1002_Cell_wall_biogenesis/degradation,_and_Cell_division


id: CL:1003
description: Mixed, incl. Cell wall biogenesis/degradation, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1003_Mixed,_incl._Cell_wall_biogenesis/degradation,_and_Penicillin_binding


id: CL:1006
description: Cell wall biogenesis/degradation, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1006_Cell_wall_biogenesis/degradation,_and_Penicillin_binding


id: CL:1010
description: Mur ligase family, glutamate ligase domain, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1010_Mur_ligase_family,_glutamate_ligase_domain,_and_Vancomycin_resistance


id: CL:1028
description: Cell division site, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1028_Cell_division_site,_and_Penicillin_binding


id: CL:1068
description: Mixed, incl. Protein insertion into membrane, and PPIC-type PPIASE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1068_Mixed,_incl._Protein_insertion_into_membrane,_and_PPIC-type_PPIASE_domain


id: CL:1070
description: Protein insertion into membrane, and PPIC-type PPIASE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1070_Protein_insertion_into_membrane,_and_PPIC-type_PPIASE_domain


id: CL:1082
description: Mixed, incl. Septum digestion after cytokinesis, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1082_Mixed,_incl._Septum_digestion_after_cytokinesis,_and_Tetratricopeptide_repeat


id: CL:1091
description: Mixed, incl. Antibiotic resistance, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1091_Mixed,_incl._Antibiotic_resistance,_and_Glycosyl_transferase_family_4


id: CL:1101
description: Mixed, incl. Radical SAM superfamily, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1101_Mixed,_incl._Radical_SAM_superfamily,_and_lysyl-tRNA_aminoacylation


id: CL:1113
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1113_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Cation_efflux_family


id: CL:1114
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1114_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Cation_efflux_family


id: CL:1116
description: Mixed, incl. Lipoprotein metabolic process, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1116_Mixed,_incl._Lipoprotein_metabolic_process,_and_AAA_domain


id: CL:1118
description: Mixed, incl. Lipoprotein metabolic process, and Methylthiotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1118_Mixed,_incl._Lipoprotein_metabolic_process,_and_Methylthiotransferase_activity


id: CL:1142
description: Cation efflux family, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1142_Cation_efflux_family,_and_RNA_(guanine-N7)-methylation


id: CL:1154
description: Mixed, incl. Peptidoglycan transport, and tryptophan-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1154_Mixed,_incl._Peptidoglycan_transport,_and_tryptophan-tRNA_ligase_activity


id: CL:1171
description: Mixed, incl. Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1171_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:1172
description: Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1172_Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:1173
description: Cellular amino acid biosynthetic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1173_Cellular_amino_acid_biosynthetic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1175
description: Cellular amino acid biosynthetic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1175_Cellular_amino_acid_biosynthetic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1176
description: Alpha-amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1176_Alpha-amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1177
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1177_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Cysteine_and_methionine_metabolism


id: CL:1179
description: Aspartate family amino acid biosynthetic process, and L-serine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1179_Aspartate_family_amino_acid_biosynthetic_process,_and_L-serine_metabolic_process


id: CL:1180
description: Lysine biosynthesis, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1180_Lysine_biosynthesis,_and_L-serine_biosynthetic_process


id: CL:1181
description: Threonine metabolic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1181_Threonine_metabolic_process,_and_Lysine_biosynthesis


id: CL:1216
description: Sulfur amino acid metabolic process, and S-adenosylmethionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1216_Sulfur_amino_acid_metabolic_process,_and_S-adenosylmethionine_metabolic_process


id: CL:1217
description: S-methyltransferase activity, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1217_S-methyltransferase_activity,_and_One-carbon_metabolic_process


id: CL:1230
description: Cysteine biosynthetic process from serine, and tRNA synthetases class I (M)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1230_Cysteine_biosynthetic_process_from_serine,_and_tRNA_synthetases_class_I_(M)


id: CL:1249
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1249_Aromatic_amino_acid_family_biosynthetic_process


id: CL:1288
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1288_Ribonucleoside_monophosphate_biosynthetic_process,_and_Glutamine_family_amino_acid_biosynthetic_process

description:
  Ribonucleoside monophosphate biosynthetic process, and Glutamine family amino acid biosynthetic process


id: CL:1289
description: Ribonucleoside monophosphate biosynthetic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1289_Ribonucleoside_monophosphate_biosynthetic_process,_and_Tetrahydrofolate_interconversion


id: CL:1290
description: Ribonucleoside monophosphate biosynthetic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1290_Ribonucleoside_monophosphate_biosynthetic_process,_and_Tetrahydrofolate_interconversion


id: CL:1323
description: UMP biosynthetic process, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1323_UMP_biosynthetic_process,_and_Oxidoreductase_FAD-binding_domain


id: CL:1342
description: GMP biosynthesis, and AMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1342_GMP_biosynthesis,_and_AMP_metabolic_process


id: CL:1356
description: Glutamine family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1356_Glutamine_family_amino_acid_biosynthetic_process


id: CL:1357
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1357_Proline_metabolic_process,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Proline metabolic process, and Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor


id: CL:1359
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1359_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: CL:1400
description: Imidazoleglycerol-phosphate synthase activity, and Histidine biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1400_Imidazoleglycerol-phosphate_synthase_activity,_and_Histidine_biosynthesis_protein


id: CL:1434
description: Diaminopimelate biosynthesis, and Purine nucleosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1434_Diaminopimelate_biosynthesis,_and_Purine_nucleosidase_activity


id: CL:1444
description: Vitamin biosynthetic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1444_Vitamin_biosynthetic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1446
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1446_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Riboflavin_metabolic_process


id: CL:1448
description: Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1448_Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:1472
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1472_Pyridine_nucleotide_biosynthetic_process


id: CL:1474
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1474_Pyridine_nucleotide_biosynthetic_process


id: CL:1517
description: Porphyrin-containing compound biosynthetic process, and ITP diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1517_Porphyrin-containing_compound_biosynthetic_process,_and_ITP_diphosphatase_activity


id: CL:1518
description: Porphyrin-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1518_Porphyrin-containing_compound_biosynthetic_process


id: CL:1520
description: Porphyrin biosynthesis, and Uroporphyrinogen-III synthase HemD
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1520_Porphyrin_biosynthesis,_and_Uroporphyrinogen-III_synthase_HemD


id: CL:1533
description: Porphyrin biosynthesis, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1533_Porphyrin_biosynthesis,_and_Methyltransferase_domain


id: CL:1543
description: Mixed, incl. ITP diphosphatase activity, and Coproporphyrinogen oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1543_Mixed,_incl._ITP_diphosphatase_activity,_and_Coproporphyrinogen_oxidase_activity


id: CL:1556
description: Mixed, incl. Import across plasma membrane, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1556_Mixed,_incl._Import_across_plasma_membrane,_and_DNA_catabolic_process


id: CL:1578
description: Pyridoxine biosynthesis, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1578_Pyridoxine_biosynthesis,_and_Peptidase_S24-like


id: CL:158
description: Gene expression, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:158_Gene_expression,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:159
description: Gene expression, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:159_Gene_expression,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:160
description: Gene expression, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:160_Gene_expression,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1606
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1606_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1608
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1608_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:161
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:161_Translation,_and_RNA_metabolic_process


id: CL:1610
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1610_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1611
description: Mixed, incl. Valine, leucine and isoleucine degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1611_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1612
description: Mixed, incl. Fatty acid degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1612_Mixed,_incl._Fatty_acid_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1613
description: Mixed, incl. Fatty acid degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1613_Mixed,_incl._Fatty_acid_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1617
description: Mixed, incl. C-acyltransferase activity, and enoyl-CoA hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1617_Mixed,_incl._C-acyltransferase_activity,_and_enoyl-CoA_hydratase_activity


id: CL:1618
description: C-acyltransferase activity, and enoyl-CoA hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1618_C-acyltransferase_activity,_and_enoyl-CoA_hydratase_activity


id: CL:162
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:162_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1620
description: C-acyltransferase activity, and 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1620_C-acyltransferase_activity,_and_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:1622
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain, and C-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1622_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal_domain,_and_C-acyltransferase_activity


id: CL:1625
description: 3-hydroxyacyl-CoA dehydrogenase activity, and Thiolase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1625_3-hydroxyacyl-CoA_dehydrogenase_activity,_and_Thiolase,_C-terminal_domain


id: CL:164
description: Mixed, incl. Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:164_Mixed,_incl._Ribosome,_and_Translation_regulator_activity


id: CL:1648
description: Mixed, incl. Thiolase, N-terminal domain, and Geraniol degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1648_Mixed,_incl._Thiolase,_N-terminal_domain,_and_Geraniol_degradation


id: CL:166
description: Mixed, incl. Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:166_Mixed,_incl._Ribosome,_and_Translation_regulator_activity


id: CL:1665
description: Electron transfer flavoprotein domain, and Acetyl-CoA dehydrogenase C-terminal like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1665_Electron_transfer_flavoprotein_domain,_and_Acetyl-CoA_dehydrogenase_C-terminal_like


id: CL:167
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:167_Ribosome,_and_Translation_regulator_activity


id: CL:1678
description: Sterol catabolic process, and C-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1678_Sterol_catabolic_process,_and_C-acyltransferase_activity


id: CL:169
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:169_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1698
description: Acyl-CoA dehydrogenase, middle domain, and Trypsin-like peptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1698_Acyl-CoA_dehydrogenase,_middle_domain,_and_Trypsin-like_peptidase_domain


id: CL:170
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:170_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1713
description: Enoyl-CoA hydratase/isomerase, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1713_Enoyl-CoA_hydratase/isomerase,_and_Alpha/beta_hydrolase_fold


id: CL:1715
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1715_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_and_Superoxide_dismutase_activity


id: CL:1716
description: Mixed, incl. enoyl-CoA hydratase activity, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1716_Mixed,_incl._enoyl-CoA_hydratase_activity,_and_Superoxide_dismutase_activity


id: CL:1719
description: Mixed, incl. Superoxide dismutase activity, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1719_Mixed,_incl._Superoxide_dismutase_activity,_and_Galactose_metabolism


id: CL:173
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:173_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1735
description: Mixed, incl. Superoxide dismutase activity, and Steroid dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1735_Mixed,_incl._Superoxide_dismutase_activity,_and_Steroid_dehydrogenase_activity


id: CL:1745
description: Alditol metabolic process, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1745_Alditol_metabolic_process,_and_Enoyl-CoA_hydratase/isomerase


id: CL:176
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:176_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1769
description: Mixed, incl. Beta-keto acid cleavage enzyme, and D-ala D-ala ligase C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1769_Mixed,_incl._Beta-keto_acid_cleavage_enzyme,_and_D-ala_D-ala_ligase_C-terminus


id: CL:1783
description: Mixed, incl. beta-Alanine metabolism, and Valine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1783_Mixed,_incl._beta-Alanine_metabolism,_and_Valine_catabolic_process


id: CL:1786
description: Mixed, incl. Valine catabolic process, and AMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1786_Mixed,_incl._Valine_catabolic_process,_and_AMP_binding


id: CL:180
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:180_Structural_constituent_of_ribosome


id: CL:1805
description: Mixed, incl. Phosphoglycerate mutase family, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1805_Mixed,_incl._Phosphoglycerate_mutase_family,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:182
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:182_Structural_constituent_of_ribosome


id: CL:1826
description: Acyl-CoA dehydrogenase, C-terminal domain, and Nitroreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1826_Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Nitroreductase_family


id: CL:183
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:183_Structural_constituent_of_ribosome


id: CL:1845
description: Mixed, incl. Shikimate kinase, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1845_Mixed,_incl._Shikimate_kinase,_and_4Fe-4S_binding_domain


id: CL:1849
description: Mixed, incl. 4Fe-4S binding domain, and Phenylacetic acid catabolic protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1849_Mixed,_incl._4Fe-4S_binding_domain,_and_Phenylacetic_acid_catabolic_protein


id: CL:185
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:185_Structural_constituent_of_ribosome


id: CL:187
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:187_Structural_constituent_of_ribosome


id: CL:1872
description: Mixed, incl. KR domain, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1872_Mixed,_incl._KR_domain,_and_Fatty_acid_biosynthetic_process


id: CL:1874
description: Mixed, incl. KR domain, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1874_Mixed,_incl._KR_domain,_and_Fatty_acid_biosynthetic_process


id: CL:1875
description: Mixed, incl. KR domain, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1875_Mixed,_incl._KR_domain,_and_Fatty_acid_biosynthetic_process


id: CL:1876
description: Mixed, incl. KR domain, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1876_Mixed,_incl._KR_domain,_and_Fatty_acid_biosynthetic_process


id: CL:1879
description: Mixed, incl. KR domain, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1879_Mixed,_incl._KR_domain,_and_Fatty_acid_biosynthetic_process


id: CL:188
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:188_Structural_constituent_of_ribosome


id: CL:1880
description: Mixed, incl. KR domain, and Negative regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1880_Mixed,_incl._KR_domain,_and_Negative_regulation_of_secretion


id: CL:1881
description: KR domain, and Negative regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1881_KR_domain,_and_Negative_regulation_of_secretion


id: CL:1883
description: KR domain, and Negative regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1883_KR_domain,_and_Negative_regulation_of_secretion


id: CL:1884
description: KR domain, and Negative regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1884_KR_domain,_and_Negative_regulation_of_secretion


id: CL:1885
description: KR domain, and Acetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1885_KR_domain,_and_Acetate_catabolic_process


id: CL:1886
description: Zinc-binding dehydrogenase, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1886_Zinc-binding_dehydrogenase,_and_KR_domain


id: CL:1897
description: Acetate catabolic process, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1897_Acetate_catabolic_process,_and_KR_domain


id: CL:1908
description: Zinc-binding dehydrogenase, and MaoC like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1908_Zinc-binding_dehydrogenase,_and_MaoC_like_domain


id: CL:1910
description: Mixed, incl. Sphingolipid metabolism, and MaoC like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1910_Mixed,_incl._Sphingolipid_metabolism,_and_MaoC_like_domain


id: CL:1927
description: Mixed, incl. MatE, and Negative regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1927_Mixed,_incl._MatE,_and_Negative_regulation_of_secretion


id: CL:1947
description: Mixed, incl. KR domain, and Sulfate permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1947_Mixed,_incl._KR_domain,_and_Sulfate_permease_family


id: CL:1949
description: Mixed, incl. KR domain, and Sulfate permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1949_Mixed,_incl._KR_domain,_and_Sulfate_permease_family


id: CL:1952
description: Mixed, incl. Deacetylase activity, and WD repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1952_Mixed,_incl._Deacetylase_activity,_and_WD_repeat


id: CL:1971
description: Mixed, incl. Sulfate permease family, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:1971_Mixed,_incl._Sulfate_permease_family,_and_DNA_repair_complex


id: CL:2051
description: N-terminal half of MaoC dehydratase, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2051_N-terminal_half_of_MaoC_dehydratase,_and_MatE


id: CL:2061
description: Mixed, incl. Choline dehydrogenase activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2061_Mixed,_incl._Choline_dehydrogenase_activity,_and_Tetratricopeptide_repeats


id: CL:2063
description: Mixed, incl. Choline dehydrogenase activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2063_Mixed,_incl._Choline_dehydrogenase_activity,_and_Tetratricopeptide_repeats


id: CL:2065
description: Choline dehydrogenase activity, and WD repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2065_Choline_dehydrogenase_activity,_and_WD_repeat


id: CL:2111
description: Mixed, incl. AMP-binding enzyme C-terminal domain, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2111_Mixed,_incl._AMP-binding_enzyme_C-terminal_domain,_and_Cytochrome_P450


id: CL:2112
description: Mixed, incl. AMP-binding enzyme C-terminal domain, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2112_Mixed,_incl._AMP-binding_enzyme_C-terminal_domain,_and_Cytochrome_P450


id: CL:2114
description: AMP-binding enzyme C-terminal domain, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2114_AMP-binding_enzyme_C-terminal_domain,_and_Acid_phosphatase_homologues


id: CL:2117
description: AMP-binding enzyme C-terminal domain, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2117_AMP-binding_enzyme_C-terminal_domain,_and_Acid_phosphatase_homologues


id: CL:2121
description: Mixed, incl. Phospholipid catabolic process, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2121_Mixed,_incl._Phospholipid_catabolic_process,_and_Cytochrome_P450


id: CL:2123
description: Cytochrome P450, and Phospholipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2123_Cytochrome_P450,_and_Phospholipid_catabolic_process


id: CL:216
description: Mixed, incl. Large ribosomal subunit, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:216_Mixed,_incl._Large_ribosomal_subunit,_and_Small_ribosomal_subunit


id: CL:2163
description: Mixed, incl. Dienelactone hydrolase family, and N,N-dimethylaniline monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2163_Mixed,_incl._Dienelactone_hydrolase_family,_and_N,N-dimethylaniline_monooxygenase_activity


id: CL:2172
description: Mixed, incl. Methylglyoxal catabolic process to lactate, and Steroid dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2172_Mixed,_incl._Methylglyoxal_catabolic_process_to_lactate,_and_Steroid_dehydrogenase_activity


id: CL:2175
description: Mixed, incl. Steroid dehydrogenase activity, and Rubredoxin-like zinc ribbon domain (DUF35_N)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2175_Mixed,_incl._Steroid_dehydrogenase_activity,_and_Rubredoxin-like_zinc_ribbon_domain_(DUF35_N)


id: CL:2194
description: Carbon metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2194_Carbon_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:2195
description: Carbon metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2195_Carbon_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:2196
description: Mixed, incl. Citrate cycle (TCA cycle), and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2196_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Branched-chain_amino_acid_metabolic_process


id: CL:2197
description: Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2197_Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:2199
description: Citrate cycle (TCA cycle), and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2199_Citrate_cycle_(TCA_cycle),_and_Glycine_catabolic_process


id: CL:2200
description: Citrate cycle (TCA cycle), and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2200_Citrate_cycle_(TCA_cycle),_and_Glycine_catabolic_process


id: CL:2201
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2201_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor,_and_Glycine_catabolic_process

description:
  Mixed, incl. Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and Glycine catabolic process


id: CL:2203
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2203_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor,_and_e3_binding_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and e3 binding domain


id: CL:2206
description: CoA-ligase, and e3 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2206_CoA-ligase,_and_e3_binding_domain


id: CL:2241
description: Fumarate hydratase activity, and CoA-ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2241_Fumarate_hydratase_activity,_and_CoA-ligase


id: CL:2265
description: succinate-CoA ligase activity, and Amino acid kinase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2265_succinate-CoA_ligase_activity,_and_Amino_acid_kinase_family


id: CL:2281
description: Mixed, incl. Ligase activity, forming carbon-carbon bonds, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2281_Mixed,_incl._Ligase_activity,_forming_carbon-carbon_bonds,_and_acetyl-CoA_metabolic_process


id: CL:2282
description: Mixed, incl. Ligase activity, forming carbon-carbon bonds, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2282_Mixed,_incl._Ligase_activity,_forming_carbon-carbon_bonds,_and_acetyl-CoA_metabolic_process


id: CL:2283
description: Mixed, incl. acetyl-CoA metabolic process, and ATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2283_Mixed,_incl._acetyl-CoA_metabolic_process,_and_ATP-grasp_domain


id: CL:2285
description: AMP binding, and Glyoxylate cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2285_AMP_binding,_and_Glyoxylate_cycle


id: CL:229
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:229_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:2299
description: ATP-grasp domain, and acetyl-CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2299_ATP-grasp_domain,_and_acetyl-CoA_hydrolase_activity


id: CL:231
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:231_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:2310
description: Ligase activity, forming carbon-carbon bonds, and Methylmalonyl-CoA mutase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2310_Ligase_activity,_forming_carbon-carbon_bonds,_and_Methylmalonyl-CoA_mutase


id: CL:2312
description: Ligase activity, forming carbon-carbon bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2312_Ligase_activity,_forming_carbon-carbon_bonds


id: CL:2328
description: Methylmalonyl-CoA mutase, and Lactoylglutathione lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2328_Methylmalonyl-CoA_mutase,_and_Lactoylglutathione_lyase_activity


id: CL:2337
description: Oxaloacetate metabolic process, and Phosphoenolpyruvate carboxykinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2337_Oxaloacetate_metabolic_process,_and_Phosphoenolpyruvate_carboxykinase_activity


id: CL:2346
description: Valine, leucine and isoleucine biosynthesis, and Thiamine pyrophosphate enzyme, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2346_Valine,_leucine_and_isoleucine_biosynthesis,_and_Thiamine_pyrophosphate_enzyme,_central_domain


id: CL:2348
description: Valine, leucine and isoleucine biosynthesis, and Thiamine pyrophosphate enzyme, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2348_Valine,_leucine_and_isoleucine_biosynthesis,_and_Thiamine_pyrophosphate_enzyme,_central_domain


id: CL:2351
description: Branched-chain amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2351_Branched-chain_amino_acid_biosynthetic_process


id: CL:2354
description: Leucine biosynthesis, and Acetolactate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2354_Leucine_biosynthesis,_and_Acetolactate_synthase_activity


id: CL:2389
description: Mixed, incl. Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2389_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolysis


id: CL:2391
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2391_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:2392
description: Glycolysis, and Pentose-phosphate shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2392_Glycolysis,_and_Pentose-phosphate_shunt


id: CL:2393
description: Glycolysis, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2393_Glycolysis,_and_NAD_metabolic_process


id: CL:2415
description: Pentose-phosphate shunt, and Gluconokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2415_Pentose-phosphate_shunt,_and_Gluconokinase_activity


id: CL:2429
description: Mixed, incl. pfkB family carbohydrate kinase, and Aldehyde-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2429_Mixed,_incl._pfkB_family_carbohydrate_kinase,_and_Aldehyde-lyase_activity


id: CL:2443
description: Mixed, incl. Ethanol metabolic process, and Halogenated hydrocarbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2443_Mixed,_incl._Ethanol_metabolic_process,_and_Halogenated_hydrocarbon_metabolic_process


id: CL:2446
description: Ethanol metabolic process, and Halogenated hydrocarbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2446_Ethanol_metabolic_process,_and_Halogenated_hydrocarbon_metabolic_process


id: CL:2468
description: Mixed, incl. Lactate metabolic process, and Glycolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2468_Mixed,_incl._Lactate_metabolic_process,_and_Glycolate_metabolic_process


id: CL:2470
description: Lactate metabolic process, and Glycolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2470_Lactate_metabolic_process,_and_Glycolate_metabolic_process


id: CL:2472
description: Glycolate metabolic process, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2472_Glycolate_metabolic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain


id: CL:2510
description: Mixed, incl. Xenobiotic catabolic process, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2510_Mixed,_incl._Xenobiotic_catabolic_process,_and_Dioxygenase


id: CL:2511
description: Mixed, incl. Dioxygenase, and Reductase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2511_Mixed,_incl._Dioxygenase,_and_Reductase_C-terminal


id: CL:2512
description: Mixed, incl. Reductase C-terminal, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2512_Mixed,_incl._Reductase_C-terminal,_and_Dioxygenase


id: CL:2514
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2514_Mixed,_incl._Reductase_C-terminal,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor

description:
  Mixed, incl. Reductase C-terminal, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor


id: CL:2518
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2518_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor,_and_Xylene_degradation

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor, and Xylene degradation


id: CL:2545
description: Amidohydrolase, and Nitrite reductase [NAD(P)H] activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2545_Amidohydrolase,_and_Nitrite_reductase_[NAD(P)H]_activity


id: CL:2554
description: Phenylacetate catabolic process, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2554_Phenylacetate_catabolic_process,_and_Oxidoreductase_FAD-binding_domain


id: CL:2560
description: Phenylacetic acid catabolic protein, and Iron-sulfur cluster assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2560_Phenylacetic_acid_catabolic_protein,_and_Iron-sulfur_cluster_assembly_protein


id: CL:2592
description: Mixed, incl. Carnitine catabolic process, and Thioesterase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2592_Mixed,_incl._Carnitine_catabolic_process,_and_Thioesterase_superfamily


id: CL:2594
description: Thioesterase superfamily, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2594_Thioesterase_superfamily,_and_Phosphoglycerate_mutase_family


id: CL:2612
description: Mixed, incl. Flavin reductase like domain, and L-methylmalonyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2612_Mixed,_incl._Flavin_reductase_like_domain,_and_L-methylmalonyl-CoA_metabolic_process


id: CL:2621
description: Mostly uncharacterized, incl. Acyl-CoA dehydrogenase, C-terminal domain, and Endonuclease III
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2621_Mostly_uncharacterized,_incl._Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Endonuclease_III


id: CL:2623
description: Mixed, incl. Acyl-CoA dehydrogenase, C-terminal domain, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2623_Mixed,_incl._Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Glyoxalase-like_domain


id: CL:2625
description: Mixed, incl. Glyoxalase-like domain, and Phospholipase/Carboxylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2625_Mixed,_incl._Glyoxalase-like_domain,_and_Phospholipase/Carboxylesterase


id: CL:2654
description: Mixed, incl. Glycerophospholipid metabolism, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2654_Mixed,_incl._Glycerophospholipid_metabolism,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:2655
description: Mixed, incl. Glycerophospholipid metabolism, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2655_Mixed,_incl._Glycerophospholipid_metabolism,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:2656
description: Mixed, incl. Phospholipid biosynthesis, and glycerol-3-phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2656_Mixed,_incl._Phospholipid_biosynthesis,_and_glycerol-3-phosphate_metabolic_process


id: CL:2659
description: glycerol-3-phosphate metabolic process, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2659_glycerol-3-phosphate_metabolic_process,_and_Phosphate_acyltransferases


id: CL:2678
description: CDP-alcohol phosphatidyltransferase, and Phospholipid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2678_CDP-alcohol_phosphatidyltransferase,_and_Phospholipid_biosynthesis


id: CL:2693
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2693_Cyclic_nucleotide-monophosphate_binding_domain,_and_Domain_in_cystathionine_beta-synthase_and_other_proteins.

description:
  Cyclic nucleotide-monophosphate binding domain, and Domain in cystathionine beta-synthase and other proteins.


id: CL:2695
description: Cyclic nucleotide-monophosphate binding domain, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2695_Cyclic_nucleotide-monophosphate_binding_domain,_and_BON_domain


id: CL:2720
description: Mixed, incl. Patatin phospholipase , and Acetoacetate decarboxylase (ADC)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2720_Mixed,_incl._Patatin_phospholipase_,_and_Acetoacetate_decarboxylase_(ADC)


id: CL:2721
description: Mixed, incl. Ether lipid metabolism, and PHB de-polymerase C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2721_Mixed,_incl._Ether_lipid_metabolism,_and_PHB_de-polymerase_C-terminus


id: CL:2734
description: Acetoacetate decarboxylase (ADC), and Patatin phospholipase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2734_Acetoacetate_decarboxylase_(ADC),_and_Patatin_phospholipase


id: CL:274
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:274_Structural_constituent_of_ribosome


id: CL:2745
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2745_Mixed,_incl._Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.,_and_Fatty_acid_desaturase

description:
  Mixed, incl. Four repeated domains in the Fasciclin I family of proteins, present in many other contexts., and Fatty acid desaturase


id: CL:2747
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2747_Mixed,_incl._Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.,_and_Oxidoreductase_molybdopterin_binding_domain

description:
  Mixed, incl. Four repeated domains in the Fasciclin I family of proteins, present in many other contexts., and Oxidoreductase molybdopterin binding domain


id: CL:2763
description: Fatty acid desaturase, and Steroid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2763_Fatty_acid_desaturase,_and_Steroid_metabolic_process


id: CL:2772
description: Mixed, incl. Saccharopine dehydrogenase NADP binding domain, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2772_Mixed,_incl._Saccharopine_dehydrogenase_NADP_binding_domain,_and_Alpha/beta_hydrolase_fold


id: CL:2774
description: Mixed, incl. Saccharopine dehydrogenase NADP binding domain, and Alkane catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2774_Mixed,_incl._Saccharopine_dehydrogenase_NADP_binding_domain,_and_Alkane_catabolic_process


id: CL:2777
description: Mixed, incl. Poly-hydroxybutyrate metabolic process, and Phasin protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2777_Mixed,_incl._Poly-hydroxybutyrate_metabolic_process,_and_Phasin_protein


id: CL:2807
description: Oxalate metabolic process, and Class II Aldolase and Adducin N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2807_Oxalate_metabolic_process,_and_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: CL:2809
description: Class II Aldolase and Adducin N-terminal domain, and HpcH/HpaI aldolase/citrate lyase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2809_Class_II_Aldolase_and_Adducin_N-terminal_domain,_and_HpcH/HpaI_aldolase/citrate_lyase_family


id: CL:2842
description: Mixed, incl. Carbohydrate biosynthetic process, and Isoprenoid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2842_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_Isoprenoid_biosynthetic_process


id: CL:2843
description: Mixed, incl. Carbohydrate biosynthetic process, and Isoprenoid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2843_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_Isoprenoid_biosynthetic_process


id: CL:2844
description: Mixed, incl. Carbohydrate biosynthetic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2844_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:2845
description: Mixed, incl. Carbohydrate biosynthetic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2845_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:2846
description: Carbohydrate biosynthetic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2846_Carbohydrate_biosynthetic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:2847
description: Carbohydrate biosynthetic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2847_Carbohydrate_biosynthetic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:2849
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2849_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:2850
description: Nucleotide-sugar metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2850_Nucleotide-sugar_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:2851
description: Nucleotide-sugar metabolic process, and Disaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2851_Nucleotide-sugar_metabolic_process,_and_Disaccharide_metabolic_process


id: CL:2853
description: Nucleotide-sugar metabolic process, and Phosphoglucomutase/phosphomannomutase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2853_Nucleotide-sugar_metabolic_process,_and_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain


id: CL:2855
description: dTDP-rhamnose metabolic process, and UDP-glucuronate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2855_dTDP-rhamnose_metabolic_process,_and_UDP-glucuronate_metabolic_process


id: CL:2867
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2867_UDP-N-acetylglucosamine_metabolic_process,_and_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain

description:
  UDP-N-acetylglucosamine metabolic process, and Phosphoglucomutase/phosphomannomutase, C-terminal domain


id: CL:2886
description: Mixed, incl. NADP+ binding, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2886_Mixed,_incl._NADP+_binding,_and_ABC_transporter


id: CL:2902
description: Mixed, incl. Glycoprotein catabolic process, and UDP-glucuronate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2902_Mixed,_incl._Glycoprotein_catabolic_process,_and_UDP-glucuronate_metabolic_process


id: CL:2912
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Glutamine amidotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2912_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Glutamine_amidotransferase_domain


id: CL:2915
description: Mixed, incl. Cytidylyltransferase, and RmlD substrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2915_Mixed,_incl._Cytidylyltransferase,_and_RmlD_substrate_binding_domain


id: CL:2945
description: Lipopolysaccharide biosynthesis, and Inositol phosphate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2945_Lipopolysaccharide_biosynthesis,_and_Inositol_phosphate_phosphatase_activity


id: CL:2947
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2947_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:2965
description: Inositol phosphate phosphatase activity, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2965_Inositol_phosphate_phosphatase_activity,_and_Lipopolysaccharide_biosynthesis


id: CL:2977
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2977_Glycosyltransferase_family_9_(heptosyltransferase),_and_ADP-L-glycero-beta-D-manno-heptose_metabolic_process

description:
  Glycosyltransferase family 9 (heptosyltransferase), and ADP-L-glycero-beta-D-manno-heptose metabolic process


id: CL:298
description: Mixed, incl. TGS domain, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:298_Mixed,_incl._TGS_domain,_and_RF-1_domain


id: CL:2988
description: Mixed, incl. Glycosyltransferase Family 4, and Extrinsic component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:2988_Mixed,_incl._Glycosyltransferase_Family_4,_and_Extrinsic_component_of_plasma_membrane


id: CL:3001
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3001_Mixed,_incl._dTDP-4-dehydrorhamnose_3,5-epimerase,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mixed, incl. dTDP-4-dehydrorhamnose 3,5-epimerase, and Helix_turn_helix multiple antibiotic resistance protein


id: CL:3015
description: Mixed, incl. Mannosylation, and lipid-A-disaccharide synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3015_Mixed,_incl._Mannosylation,_and_lipid-A-disaccharide_synthase_activity


id: CL:3017
description: Mannosylation, and lipid-A-disaccharide synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3017_Mannosylation,_and_lipid-A-disaccharide_synthase_activity


id: CL:3031
description: Mannosylation, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3031_Mannosylation,_and_Phosphotransferase_system_(PTS)


id: CL:3047
description: Mixed, incl. Isoprenoid biosynthetic process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3047_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Ubiquinone_metabolic_process


id: CL:3049
description: Mixed, incl. Ubiquinone biosynthesis complex, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3049_Mixed,_incl._Ubiquinone_biosynthesis_complex,_and_Biotin_metabolic_process


id: CL:3051
description: Mixed, incl. Ubiquinone biosynthesis complex, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3051_Mixed,_incl._Ubiquinone_biosynthesis_complex,_and_Biotin_metabolic_process


id: CL:3052
description: Ubiquinone biosynthesis complex, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3052_Ubiquinone_biosynthesis_complex,_and_FAD_binding_domain


id: CL:3054
description: FAD binding domain, and Organelle inner membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3054_FAD_binding_domain,_and_Organelle_inner_membrane


id: CL:3102
description: Mixed, incl. C-methyltransferase C-terminal domain, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3102_Mixed,_incl._C-methyltransferase_C-terminal_domain,_and_Cytidylyltransferase_activity


id: CL:3121
description: Mixed, incl. Isoprenoid biosynthetic process, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3121_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Carotenoid_biosynthesis


id: CL:3123
description: Mixed, incl. Carotenoid biosynthesis, and Flavin containing amine oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3123_Mixed,_incl._Carotenoid_biosynthesis,_and_Flavin_containing_amine_oxidoreductase


id: CL:3125
description: Mixed, incl. Carotenoid biosynthesis, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3125_Mixed,_incl._Carotenoid_biosynthesis,_and_Steroid_biosynthesis


id: CL:3127
description: Carotenoid biosynthesis, and Triterpenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3127_Carotenoid_biosynthesis,_and_Triterpenoid_metabolic_process


id: CL:3147
description: Flavin containing amine oxidoreductase, and Carotene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3147_Flavin_containing_amine_oxidoreductase,_and_Carotene_metabolic_process


id: CL:3162
description: Isoprene biosynthesis, and Polyprenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3162_Isoprene_biosynthesis,_and_Polyprenyltransferase_activity


id: CL:3187
description: Mixed, incl. Sodium/calcium exchanger protein, and methionyl-tRNA formyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3187_Mixed,_incl._Sodium/calcium_exchanger_protein,_and_methionyl-tRNA_formyltransferase_activity


id: CL:3202
description: Mixed, incl. Electron transport chain, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3202_Mixed,_incl._Electron_transport_chain,_and_Prosthetic_group_metabolic_process


id: CL:3203
description: Mixed, incl. Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3203_Mixed,_incl._Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:3204
description: Mixed, incl. Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3204_Mixed,_incl._Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:3205
description: Mixed, incl. Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3205_Mixed,_incl._Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:3206
description: Mixed, incl. Oxidative phosphorylation, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3206_Mixed,_incl._Oxidative_phosphorylation,_and_Cytochrome_c


id: CL:3207
description: Oxidative phosphorylation, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3207_Oxidative_phosphorylation,_and_Cytochrome_c


id: CL:3209
description: Mixed, incl. NADH dehydrogenase (quinone) activity, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3209_Mixed,_incl._NADH_dehydrogenase_(quinone)_activity,_and_Alpha/beta_hydrolase_fold


id: CL:3218
description: Quinone, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3218_Quinone,_and_Proton-conducting_membrane_transporter


id: CL:3219
description: Quinone, and NADH dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3219_Quinone,_and_NADH_dehydrogenase_complex


id: CL:3236
description: NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3236_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:3271
description: Mixed, incl. Cytochrome-c oxidase activity, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3271_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Cytochrome_c


id: CL:3273
description: Mixed, incl. Cytochrome-c oxidase activity, and Peptidase M16 inactive domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3273_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Peptidase_M16_inactive_domain


id: CL:3276
description: Cytochrome-c oxidase activity, and Peptidase M16 inactive domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3276_Cytochrome-c_oxidase_activity,_and_Peptidase_M16_inactive_domain


id: CL:3278
description: Cytochrome-c oxidase activity, and Rieske [2Fe-2S] domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3278_Cytochrome-c_oxidase_activity,_and_Rieske_[2Fe-2S]_domain


id: CL:328
description: RNA polymerase, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:328_RNA_polymerase,_and_Transcription_antitermination


id: CL:3312
description: Cytochrome complex, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3312_Cytochrome_complex,_and_Cytochrome_c


id: CL:332
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:332_RNA_polymerase,_and_Transcription_termination


id: CL:3329
description: Mixed, incl. Respiratory chain, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3329_Mixed,_incl._Respiratory_chain,_and_Gas_transport


id: CL:3333
description: Respiratory chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3333_Respiratory_chain,_and_Oxidative_phosphorylation


id: CL:3351
description: Mixed, incl. Sulfur oxidation, and Thioredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3351_Mixed,_incl._Sulfur_oxidation,_and_Thioredoxin-like_domain


id: CL:3352
description: Mixed, incl. Sulfur oxidation, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3352_Mixed,_incl._Sulfur_oxidation,_and_Cytochrome_c


id: CL:3354
description: Mixed, incl. Sulfur oxidation, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3354_Mixed,_incl._Sulfur_oxidation,_and_Cytochrome_c


id: CL:3357
description: Mixed, incl. Sulfur oxidation, and Sulfur oxidation protein SoxY
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3357_Mixed,_incl._Sulfur_oxidation,_and_Sulfur_oxidation_protein_SoxY


id: CL:3373
description: Mixed, incl. Sulfur oxidation, and Sulfur oxidation protein SoxY
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3373_Mixed,_incl._Sulfur_oxidation,_and_Sulfur_oxidation_protein_SoxY


id: CL:3397
description: Thioredoxin-like domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3397_Thioredoxin-like_domain,_and_Sulphur_transport


id: CL:3412
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3412_Mixed,_incl._Aerobic_electron_transport_chain,_and_Cytochrome_C_biogenesis_protein_transmembrane_region

description:
  Mixed, incl. Aerobic electron transport chain, and Cytochrome C biogenesis protein transmembrane region


id: CL:3424
description: Mixed, incl. PQQ biosynthesis, and Nucleoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3424_Mixed,_incl._PQQ_biosynthesis,_and_Nucleoplasm


id: CL:3426
description: Nucleoplasm, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3426_Nucleoplasm,_and_Calcium_ion_binding


id: CL:3462
description: Mixed, incl. Prosthetic group metabolic process, and Molybdenum ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3462_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Molybdenum_ion_binding


id: CL:3463
description: Mixed, incl. Molydopterin dinucleotide binding domain, and Methane metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3463_Mixed,_incl._Molydopterin_dinucleotide_binding_domain,_and_Methane_metabolism


id: CL:3465
description: Mixed, incl. Molydopterin dinucleotide binding domain, and Biotin-protein ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3465_Mixed,_incl._Molydopterin_dinucleotide_binding_domain,_and_Biotin-protein_ligase_activity


id: CL:3466
description: Molydopterin dinucleotide binding domain, and Hydrocarbon biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3466_Molydopterin_dinucleotide_binding_domain,_and_Hydrocarbon_biosynthetic_process


id: CL:3478
description: Mixed, incl. Biotin-protein ligase activity, and Molybdenum cofactor guanylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3478_Mixed,_incl._Biotin-protein_ligase_activity,_and_Molybdenum_cofactor_guanylyltransferase_activity


id: CL:3499
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3499_Prosthetic_group_metabolic_process


id: CL:3501
description: Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3501_Molybdenum_cofactor_biosynthesis


id: CL:3527
description: Mixed, incl. Iron-sulfur cluster assembly, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3527_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Rhodanese_Homology_Domain


id: CL:3528
description: Iron-sulfur cluster assembly, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3528_Iron-sulfur_cluster_assembly,_and_Sulfurtransferase_activity


id: CL:3529
description: Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3529_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:3530
description: Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3530_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:3535
description: Iron-sulfur cluster assembly complex, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3535_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_desulfurase_activity


id: CL:3559
description: Metallochaperone activity, and Glutathione oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3559_Metallochaperone_activity,_and_Glutathione_oxidoreductase_activity


id: CL:3568
description: Protein lipoylation, and Alkylbase DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3568_Protein_lipoylation,_and_Alkylbase_DNA_N-glycosylase_activity


id: CL:357
description: Intracellular protein transmembrane transport, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:357_Intracellular_protein_transmembrane_transport,_and_Protein_carrier_chaperone


id: CL:3579
description: Mixed, incl. Chromate transport, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3579_Mixed,_incl._Chromate_transport,_and_Rhodanese_Homology_Domain


id: CL:3580
description: Mixed, incl. Chromate transport, and Methylglyoxal catabolic process to lactate
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3580_Mixed,_incl._Chromate_transport,_and_Methylglyoxal_catabolic_process_to_lactate


id: CL:3582
description: Mixed, incl. Hydroxyacylglutathione hydrolase activity, and Lactoylglutathione lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3582_Mixed,_incl._Hydroxyacylglutathione_hydrolase_activity,_and_Lactoylglutathione_lyase_activity


id: CL:3594
description: Chromate transport, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3594_Chromate_transport,_and_Rhodanese_Homology_Domain


id: CL:3605
description: Mixed, incl. Rhodanese Homology Domain, and Sulfur dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3605_Mixed,_incl._Rhodanese_Homology_Domain,_and_Sulfur_dioxygenase_activity


id: CL:3608
description: Rhodanese Homology Domain, and Sulfur dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3608_Rhodanese_Homology_Domain,_and_Sulfur_dioxygenase_activity


id: CL:3626
description: Mixed, incl. glutamyl-tRNA(Gln) amidotransferase complex, and Uracil catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3626_Mixed,_incl._glutamyl-tRNA(Gln)_amidotransferase_complex,_and_Uracil_catabolic_process


id: CL:3628
description: Mixed, incl. glutamyl-tRNA(Gln) amidotransferase complex, and Styrene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3628_Mixed,_incl._glutamyl-tRNA(Gln)_amidotransferase_complex,_and_Styrene_degradation


id: CL:3629
description: Mixed, incl. glutamyl-tRNA(Gln) amidotransferase complex, and Nitrile hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3629_Mixed,_incl._glutamyl-tRNA(Gln)_amidotransferase_complex,_and_Nitrile_hydratase_activity


id: CL:3631
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3631_glutamyl-tRNA(Gln)_amidotransferase_complex,_and_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity

description:
  glutamyl-tRNA(Gln) amidotransferase complex, and asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity


id: CL:3636
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity, and Amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3636_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Amidase


id: CL:3657
description: Nitrile hydratase activity, and Nitrile hydratase beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3657_Nitrile_hydratase_activity,_and_Nitrile_hydratase_beta_subunit


id: CL:3666
description: Mixed, incl. Uncharacterised MFS-type transporter YbfB, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3666_Mixed,_incl._Uncharacterised_MFS-type_transporter_YbfB,_and_RNA_5-end_processing


id: CL:3682
description: Uracil catabolic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3682_Uracil_catabolic_process,_and_Nucleobase_transport


id: CL:3686
description: Endoribonuclease L-PSP, and Isochorismatase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3686_Endoribonuclease_L-PSP,_and_Isochorismatase_family


id: CL:3711
description: Mostly uncharacterized, incl. Rubrerythrin, and Ferric uptake regulator family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3711_Mostly_uncharacterized,_incl._Rubrerythrin,_and_Ferric_uptake_regulator_family


id: CL:3713
description: Mixed, incl. Ferric uptake regulator family, and DJ-1/PfpI family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3713_Mixed,_incl._Ferric_uptake_regulator_family,_and_DJ-1/PfpI_family


id: CL:3727
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3727_Mixed,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2147),_and_FAD_linked_oxidases,_C-terminal_domain

description:
  Mixed, incl. Uncharacterized protein conserved in bacteria (DUF2147), and FAD linked oxidases, C-terminal domain


id: CL:3736
description: Mixed, incl. Degradation of aromatic compounds, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3736_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Tyrosine_metabolism


id: CL:3737
description: Mixed, incl. Degradation of aromatic compounds, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3737_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Tyrosine_metabolism


id: CL:3738
description: Mixed, incl. Phenol-containing compound metabolic process, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3738_Mixed,_incl._Phenol-containing_compound_metabolic_process,_and_Degradation_of_aromatic_compounds


id: CL:3739
description: Mixed, incl. Fumarylacetoacetate (FAA) hydrolase family, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3739_Mixed,_incl._Fumarylacetoacetate_(FAA)_hydrolase_family,_and_Tyrosine_metabolism


id: CL:3740
description: Mixed, incl. Fumarylacetoacetate (FAA) hydrolase family, and Aldolase/RraA
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3740_Mixed,_incl._Fumarylacetoacetate_(FAA)_hydrolase_family,_and_Aldolase/RraA


id: CL:3741
description: Fumarylacetoacetate (FAA) hydrolase family, and Aldolase/RraA
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3741_Fumarylacetoacetate_(FAA)_hydrolase_family,_and_Aldolase/RraA


id: CL:3744
description: Fumarylacetoacetate (FAA) hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3744_Fumarylacetoacetate_(FAA)_hydrolase_family


id: CL:3765
description: Tyrosine catabolic process, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3765_Tyrosine_catabolic_process,_and_Diol_metabolic_process


id: CL:3781
description: Mixed, incl. Sugar (and other) transporter, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3781_Mixed,_incl._Sugar_(and_other)_transporter,_and_Phosphonate_and_phosphinate_metabolism


id: CL:3783
description: Phosphodiesterase I activity, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3783_Phosphodiesterase_I_activity,_and_Major_Facilitator_Superfamily


id: CL:3801
description: Mixed, incl. Fatty acid desaturase, and Cellular amide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3801_Mixed,_incl._Fatty_acid_desaturase,_and_Cellular_amide_catabolic_process


id: CL:3810
description: Degradation of aromatic compounds, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3810_Degradation_of_aromatic_compounds,_and_Bacterial_transcriptional_regulator


id: CL:3811
description: Degradation of aromatic compounds, and Phospholipase/Carboxylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3811_Degradation_of_aromatic_compounds,_and_Phospholipase/Carboxylesterase


id: CL:3812
description: Dioxygenase, and Carboxymuconolactone decarboxylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3812_Dioxygenase,_and_Carboxymuconolactone_decarboxylase_family


id: CL:3815
description: Dioxygenase, and Adenylosuccinate lyase C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3815_Dioxygenase,_and_Adenylosuccinate_lyase_C-terminus


id: CL:3832
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3832_Mixed,_incl._Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily,_and_Dioxin_degradation

description:
  Mixed, incl. Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily, and Dioxin degradation


id: CL:3850
description: Mixed, incl. LamB/YcsF family, and Allophanate hydrolase subunit 1
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3850_Mixed,_incl._LamB/YcsF_family,_and_Allophanate_hydrolase_subunit_1


id: CL:3869
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3869_Mixed,_incl._NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase,_and_Xylose_isomerase-like_TIM_barrel

description:
  Mixed, incl. NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase, and Xylose isomerase-like TIM barrel


id: CL:3870
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3870_Mixed,_incl._NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase,_and_Xylose_isomerase-like_TIM_barrel

description:
  Mixed, incl. NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase, and Xylose isomerase-like TIM barrel


id: CL:3871
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3871_Mixed,_incl._Xylose_isomerase-like_TIM_barrel,_and_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase

description:
  Mixed, incl. Xylose isomerase-like TIM barrel, and NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase


id: CL:3886
description: Mixed, incl. Lactonohydrolase activity, and Cobalt ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3886_Mixed,_incl._Lactonohydrolase_activity,_and_Cobalt_ion_transport


id: CL:3895
description: Mixed, incl. N-terminal domain of oxidoreductase, and Thiamine pyrophosphate enzyme, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3895_Mixed,_incl._N-terminal_domain_of_oxidoreductase,_and_Thiamine_pyrophosphate_enzyme,_central_domain


id: CL:3908
description: Mixed, incl. Terpene catabolic process, and Dienelactone hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3908_Mixed,_incl._Terpene_catabolic_process,_and_Dienelactone_hydrolase_family


id: CL:3910
description: Mixed, incl. Terpene catabolic process, and Dienelactone hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3910_Mixed,_incl._Terpene_catabolic_process,_and_Dienelactone_hydrolase_family


id: CL:3941
description: Signaling, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3941_Signaling,_and_Diguanylate_cyclase


id: CL:3942
description: Signaling, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3942_Signaling,_and_Diguanylate_cyclase


id: CL:3943
description: Signaling, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3943_Signaling,_and_Diguanylate_cyclase


id: CL:3944
description: Signaling, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3944_Signaling,_and_Diguanylate_cyclase


id: CL:3946
description: Signal transduction, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3946_Signal_transduction,_and_Diguanylate_cyclase


id: CL:3948
description: Signal transduction, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3948_Signal_transduction,_and_Diguanylate_cyclase


id: CL:3950
description: Signal transduction, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3950_Signal_transduction,_and_Diguanylate_cyclase


id: CL:3952
description: Signal transduction, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3952_Signal_transduction,_and_Diguanylate_cyclase


id: CL:3953
description: Signal transduction, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3953_Signal_transduction,_and_Diguanylate_cyclase


id: CL:3954
description: Signal transduction, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3954_Signal_transduction,_and_Diguanylate_cyclase


id: CL:3956
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3956_Signal_transduction,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  Signal transduction, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:3958
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3958_Signal_transduction,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  Signal transduction, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:3961
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3961_Signal_transduction,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  Signal transduction, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:3965
description: Protein histidine kinase activity, and Signaling receptor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3965_Protein_histidine_kinase_activity,_and_Signaling_receptor_activity


id: CL:3969
description: Protein histidine kinase activity, and Molecular transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3969_Protein_histidine_kinase_activity,_and_Molecular_transducer_activity


id: CL:3970
description: PAS domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3970_PAS_domain,_and_cheY-homologous_receiver_domain


id: CL:3973
description: PAS domain, and Protein histidine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3973_PAS_domain,_and_Protein_histidine_kinase_activity


id: CL:3976
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3976_His_Kinase_A_(phosphoacceptor)_domain,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  His Kinase A (phosphoacceptor) domain, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:3979
description: His Kinase A (phosphoacceptor) domain, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3979_His_Kinase_A_(phosphoacceptor)_domain,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3983
description: His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3983_His_Kinase_A_(phosphoacceptor)_domain


id: CL:3987
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and PAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:3987_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_PAS_domain


id: CL:4044
description: Taxis, and carboxyl-O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4044_Taxis,_and_carboxyl-O-methyltransferase_activity


id: CL:4049
description: Two component signalling adaptor domain, and carboxyl-O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4049_Two_component_signalling_adaptor_domain,_and_carboxyl-O-methyltransferase_activity


id: CL:4082
description: Helix_turn_helix, Lux Regulon, and Transcriptional regulatory protein, C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4082_Helix_turn_helix,_Lux_Regulon,_and_Transcriptional_regulatory_protein,_C_terminal


id: CL:4110
description: Cell-substrate adhesion, and Putative diguanylate phosphodiesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4110_Cell-substrate_adhesion,_and_Putative_diguanylate_phosphodiesterase


id: CL:412
description: Putative tRNA binding domain, and phenylalanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:412_Putative_tRNA_binding_domain,_and_phenylalanyl-tRNA_aminoacylation


id: CL:4128
description: Adenylyl- / guanylyl cyclase, catalytic domain, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4128_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:4131
description: Adenylyl- / guanylyl cyclase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4131_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: CL:4151
description: Bacterial regulatory protein, Fis family, and Dihydrouridine synthase (Dus)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4151_Bacterial_regulatory_protein,_Fis_family,_and_Dihydrouridine_synthase_(Dus)


id: CL:4164
description: Two-component regulatory system, and Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4164_Two-component_regulatory_system,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:4199
description: Mixed, incl. Quorum sensing, and AAA ATPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4199_Mixed,_incl._Quorum_sensing,_and_AAA_ATPase_domain


id: CL:4215
description: HWE histidine kinase, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4215_HWE_histidine_kinase,_and_Sigma-70,_region_4


id: CL:422
description: Mixed, incl. Basal transcription factors, and RNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:422_Mixed,_incl._Basal_transcription_factors,_and_RNA_catabolic_process


id: CL:4225
description: Two-component regulatory system, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4225_Two-component_regulatory_system,_and_Efflux_transmembrane_transporter_activity


id: CL:4236
description: Mixed, incl. Transcriptional regulatory protein, C terminal, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4236_Mixed,_incl._Transcriptional_regulatory_protein,_C_terminal,_and_MMPL_family


id: CL:4248
description: Mixed, incl. Cilium, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4248_Mixed,_incl._Cilium,_and_Polysaccharide_biosynthetic_process


id: CL:4249
description: Cilium, and Uncharacterised protein conserved in bacteria (DUF2336)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4249_Cilium,_and_Uncharacterised_protein_conserved_in_bacteria_(DUF2336)


id: CL:425
description: Mixed, incl. Exoribonuclease activity, producing 5-phosphomonoesters, and mRNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:425_Mixed,_incl._Exoribonuclease_activity,_producing_5-phosphomonoesters,_and_mRNA_metabolic_process


id: CL:4254
description: Bacterial-type flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4254_Bacterial-type_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:4257
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4257_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:4258
description: Bacterial-type flagellum basal body, rod, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4258_Bacterial-type_flagellum_basal_body,_rod,_and_Bacterial_flagellum_biogenesis


id: CL:4260
description: Bacterial-type flagellum basal body, rod
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4260_Bacterial-type_flagellum_basal_body,_rod


id: CL:428
description: Exoribonuclease activity, producing 5-phosphomonoesters, and mRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:428_Exoribonuclease_activity,_producing_5-phosphomonoesters,_and_mRNA_processing


id: CL:4280
description: Cytoskeletal motor activity, and Bacterial-type flagellum hook
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4280_Cytoskeletal_motor_activity,_and_Bacterial-type_flagellum_hook


id: CL:4302
description: Type III flagellar switch regulator (C-ring) FliN C-term, and Flagellar rotation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4302_Type_III_flagellar_switch_regulator_(C-ring)_FliN_C-term,_and_Flagellar_rotation


id: CL:4323
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4323_Mixed,_incl._Uncharacterised_protein_conserved_in_bacteria_(DUF2336),_and_Bacterial_flagellin_N-terminal_helical_region

description:
  Mixed, incl. Uncharacterised protein conserved in bacteria (DUF2336), and Bacterial flagellin N-terminal helical region


id: CL:4325
description: Mixed, incl. Bacterial flagellin N-terminal helical region, and mRNA 5-UTR binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4325_Mixed,_incl._Bacterial_flagellin_N-terminal_helical_region,_and_mRNA_5-UTR_binding


id: CL:4326
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4326_Mixed,_incl._Uncharacterised_protein_conserved_in_bacteria_(DUF2336),_and_Flagellar_hook-length_control_protein_FliK

description:
  Mixed, incl. Uncharacterised protein conserved in bacteria (DUF2336), and Flagellar hook-length control protein FliK


id: CL:4328
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4328_Mixed,_incl._Uncharacterised_protein_conserved_in_bacteria_(DUF2336),_and_Bacterial-type_flagellum_organization

description:
  Mixed, incl. Uncharacterised protein conserved in bacteria (DUF2336), and Bacterial-type flagellum organization


id: CL:4345
description: Bacterial flagellin N-terminal helical region, and mRNA 5-UTR binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4345_Bacterial_flagellin_N-terminal_helical_region,_and_mRNA_5-UTR_binding


id: CL:4370
description: Mixed, incl. Regulation of cell killing, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4370_Mixed,_incl._Regulation_of_cell_killing,_and_Polysaccharide_biosynthetic_process


id: CL:4371
description: Mixed, incl. Protein tyrosine kinase activity, and Polysaccharide biosynthesis/export protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4371_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Polysaccharide_biosynthesis/export_protein


id: CL:4372
description: Mixed, incl. Protein tyrosine kinase activity, and Polysaccharide biosynthesis/export protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4372_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Polysaccharide_biosynthesis/export_protein


id: CL:4374
description: Mixed, incl. Chain length determinant protein, and Polysaccharide biosynthesis/export protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4374_Mixed,_incl._Chain_length_determinant_protein,_and_Polysaccharide_biosynthesis/export_protein


id: CL:4384
description: Protein tyrosine kinase activity, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4384_Protein_tyrosine_kinase_activity,_and_Nucleotidyl_transferase


id: CL:4394
description: Mixed, incl. Polysaccharide deacetylase, and Parallel beta-helix repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4394_Mixed,_incl._Polysaccharide_deacetylase,_and_Parallel_beta-helix_repeats


id: CL:4411
description: Mixed, incl. Regulation of cell killing, and Pilus formation protein N terminal region
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4411_Mixed,_incl._Regulation_of_cell_killing,_and_Pilus_formation_protein_N_terminal_region


id: CL:4413
description: Mixed, incl. Type II secretion system (T2SS), protein F, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4413_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_BON_domain


id: CL:4417
description: Type II secretion system (T2SS), protein F, and BON domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4417_Type_II_secretion_system_(T2SS),_protein_F,_and_BON_domain


id: CL:4448
description: Potassium ion transport, and Universal stress protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4448_Potassium_ion_transport,_and_Universal_stress_protein_family


id: CL:4450
description: P-type potassium transmembrane transporter activity, and Universal stress protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4450_P-type_potassium_transmembrane_transporter_activity,_and_Universal_stress_protein_family


id: CL:4473
description: Cytochrome c-type biogenesis, and Cytochrome C assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4473_Cytochrome_c-type_biogenesis,_and_Cytochrome_C_assembly_protein


id: CL:449
description: Peptidyl-proline modification, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:449_Peptidyl-proline_modification,_and_RNA_helicase_activity


id: CL:4493
description: Mixed, incl. NAD(P)+ transhydrogenase activity, and Peptidase family M3
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4493_Mixed,_incl._NAD(P)+_transhydrogenase_activity,_and_Peptidase_family_M3


id: CL:4517
description: Mixed, incl. Porin activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4517_Mixed,_incl._Porin_activity,_and_Signal


id: CL:4519
description: Mixed, incl. Porin activity, and Envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4519_Mixed,_incl._Porin_activity,_and_Envelope


id: CL:4520
description: Mixed, incl. Porin activity, and Envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4520_Mixed,_incl._Porin_activity,_and_Envelope


id: CL:4521
description: Mixed, incl. Signal, and AsmA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4521_Mixed,_incl._Signal,_and_AsmA_family


id: CL:4523
description: Mixed, incl. Signal, and AsmA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4523_Mixed,_incl._Signal,_and_AsmA_family


id: CL:4525
description: Mixed, incl. Signal, and AsmA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4525_Mixed,_incl._Signal,_and_AsmA_family


id: CL:4526
description: Mostly uncharacterized, incl. Porin activity, and Protein of unknown function (DUF2865)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4526_Mostly_uncharacterized,_incl._Porin_activity,_and_Protein_of_unknown_function_(DUF2865)


id: CL:4527
description: Mostly uncharacterized, incl. Porin activity, and Protein of unknown function (DUF2865)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4527_Mostly_uncharacterized,_incl._Porin_activity,_and_Protein_of_unknown_function_(DUF2865)


id: CL:4528
description: Mostly uncharacterized, incl. Porin activity, and Protein of unknown function (DUF2865)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4528_Mostly_uncharacterized,_incl._Porin_activity,_and_Protein_of_unknown_function_(DUF2865)


id: CL:4529
description: Mostly uncharacterized, incl. Porin activity, and Protein of unknown function (DUF2865)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4529_Mostly_uncharacterized,_incl._Porin_activity,_and_Protein_of_unknown_function_(DUF2865)


id: CL:4531
description: Mixed, incl. Porin activity, and Invasion associated locus B (IalB) protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4531_Mixed,_incl._Porin_activity,_and_Invasion_associated_locus_B_(IalB)_protein


id: CL:4534
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4534_Mostly_uncharacterized,_incl._Invasion_associated_locus_B_(IalB)_protein,_and_Protein_of_unknown_function_(DUF1214)

description:
  Mostly uncharacterized, incl. Invasion associated locus B (IalB) protein, and Protein of unknown function (DUF1214)


id: CL:4535
description: Mixed, incl. Invasion associated locus B (IalB) protein, and OmpA-like transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4535_Mixed,_incl._Invasion_associated_locus_B_(IalB)_protein,_and_OmpA-like_transmembrane_domain


id: CL:4539
description: Mixed, incl. Invasion associated locus B (IalB) protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4539_Mixed,_incl._Invasion_associated_locus_B_(IalB)_protein


id: CL:4556
description: Mixed, incl. Protein of unknown function (DUF1214), and Protein of unknown function (DUF1254)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4556_Mixed,_incl._Protein_of_unknown_function_(DUF1214),_and_Protein_of_unknown_function_(DUF1254)


id: CL:4583
description: Mostly uncharacterized, incl. Protein of unknown function (DUF2865), and AsmA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4583_Mostly_uncharacterized,_incl._Protein_of_unknown_function_(DUF2865),_and_AsmA_family


id: CL:4585
description: Mostly uncharacterized, incl. Protein of unknown function (DUF2865), and AsmA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4585_Mostly_uncharacterized,_incl._Protein_of_unknown_function_(DUF2865),_and_AsmA_family


id: CL:4588
description: Mixed, incl. Protein of unknown function (DUF2865), and Formaldehyde catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4588_Mixed,_incl._Protein_of_unknown_function_(DUF2865),_and_Formaldehyde_catabolic_process


id: CL:4591
description: Mixed, incl. Protein of unknown function (DUF2865), and Formaldehyde catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4591_Mixed,_incl._Protein_of_unknown_function_(DUF2865),_and_Formaldehyde_catabolic_process


id: CL:4625
description: Mixed, incl. Phasin protein, and Glycoprotein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4625_Mixed,_incl._Phasin_protein,_and_Glycoprotein_catabolic_process


id: CL:4628
description: Mixed, incl. Protein of unknown function (DUF1036), and Respiratory electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4628_Mixed,_incl._Protein_of_unknown_function_(DUF1036),_and_Respiratory_electron_transport_chain


id: CL:4649
description: Mixed, incl. AzlC protein, and Branched-chain amino acid transport protein (AzlD)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4649_Mixed,_incl._AzlC_protein,_and_Branched-chain_amino_acid_transport_protein_(AzlD)


id: CL:4660
description: Protein of unknown function (DUF992), and Heme
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4660_Protein_of_unknown_function_(DUF992),_and_Heme


id: CL:4669
description: Mixed, incl. Lipopolysaccharide transport, and Protein of unknown function (DUF1236)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4669_Mixed,_incl._Lipopolysaccharide_transport,_and_Protein_of_unknown_function_(DUF1236)


id: CL:4671
description: Lipopolysaccharide transport, and Protein of unknown function (DUF1236)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4671_Lipopolysaccharide_transport,_and_Protein_of_unknown_function_(DUF1236)


id: CL:4697
description: Mixed, incl. DUF218 domain, and Peptidase family M48
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4697_Mixed,_incl._DUF218_domain,_and_Peptidase_family_M48


id: CL:4718
description: Porin activity, and Siderophore transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4718_Porin_activity,_and_Siderophore_transmembrane_transporter_activity


id: CL:472
description: Mixed, incl. RNA pseudouridylate synthase, and 50S ribosome-binding GTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:472_Mixed,_incl._RNA_pseudouridylate_synthase,_and_50S_ribosome-binding_GTPase


id: CL:4720
description: Porin activity, and Siderophore transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4720_Porin_activity,_and_Siderophore_transmembrane_transporter_activity


id: CL:4728
description: Pore complex, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4728_Pore_complex,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:473
description: RNA pseudouridylate synthase, and 50S ribosome-binding GTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:473_RNA_pseudouridylate_synthase,_and_50S_ribosome-binding_GTPase


id: CL:4768
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4768_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_Biopolymer_transport_protein_ExbD/TolR

description:
  Mixed, incl. Siderophore transmembrane transporter activity, and Biopolymer transport protein ExbD/TolR


id: CL:4770
description: Energy transducer activity, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4770_Energy_transducer_activity,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:4782
description: Mixed, incl. Periplasm, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4782_Mixed,_incl._Periplasm,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:4808
description: Mixed, incl. Thiamine monophosphate synthase, and Peptidyl-lysine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4808_Mixed,_incl._Thiamine_monophosphate_synthase,_and_Peptidyl-lysine_acetylation


id: CL:4831
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4831_Mostly_uncharacterized,_incl._Methyltransferase_domain,_and_Negative_regulation_of_molecular_function

description:
  Mostly uncharacterized, incl. Methyltransferase domain, and Negative regulation of molecular function


id: CL:4833
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4833_Mostly_uncharacterized,_incl._Methyltransferase_domain,_and_Negative_regulation_of_molecular_function

description:
  Mostly uncharacterized, incl. Methyltransferase domain, and Negative regulation of molecular function


id: CL:4834
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4834_Mostly_uncharacterized,_incl._Negative_regulation_of_molecular_function,_and_Lysylphosphatidylglycerol_synthase_TM_region

description:
  Mostly uncharacterized, incl. Negative regulation of molecular function, and Lysylphosphatidylglycerol synthase TM region


id: CL:4835
description: Mostly uncharacterized, incl. Methyltransferase domain, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4835_Mostly_uncharacterized,_incl._Methyltransferase_domain,_and_Cupin_domain


id: CL:4836
description: Mixed, incl. Cupin domain, and Methyltransferase FkbM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4836_Mixed,_incl._Cupin_domain,_and_Methyltransferase_FkbM_domain


id: CL:4838
description: Mixed, incl. Methyltransferase FkbM domain, and Lytic transglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4838_Mixed,_incl._Methyltransferase_FkbM_domain,_and_Lytic_transglycosylase_activity


id: CL:484
description: Mixed, incl. RNA (guanine-N7)-methylation, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:484_Mixed,_incl._RNA_(guanine-N7)-methylation,_and_tRNA_wobble_uridine_modification


id: CL:4855
description: Mixed, incl. Methyltransferase domain, and Uncharacterised protein conserved in bacteria (DUF2336)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4855_Mixed,_incl._Methyltransferase_domain,_and_Uncharacterised_protein_conserved_in_bacteria_(DUF2336)


id: CL:4867
description: Mixed, incl. Negative regulation of molecular function, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4867_Mixed,_incl._Negative_regulation_of_molecular_function,_and_NMT1/THI5_like


id: CL:4883
description: Mixed, incl. C-5 methylation of cytosine, and MerR HTH family regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4883_Mixed,_incl._C-5_methylation_of_cytosine,_and_MerR_HTH_family_regulatory_protein


id: CL:4908
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4908_Mostly_uncharacterized,_incl._L,D-transpeptidase_catalytic_domain,_and_Gag-polyprotein_putative_aspartyl_protease

description:
  Mostly uncharacterized, incl. L,D-transpeptidase catalytic domain, and Gag-polyprotein putative aspartyl protease


id: CL:4910
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Gag-polyprotein putative aspartyl protease
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4910_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Gag-polyprotein_putative_aspartyl_protease


id: CL:4911
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4911_Mixed,_incl._Gag-polyprotein_putative_aspartyl_protease,_and_2-deoxyribonucleotide_metabolic_process

description:
  Mixed, incl. Gag-polyprotein putative aspartyl protease, and 2-deoxyribonucleotide metabolic process


id: CL:4912
description: Mixed, incl. 2-deoxyribonucleotide metabolic process, and Histidyl-tRNA synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4912_Mixed,_incl._2-deoxyribonucleotide_metabolic_process,_and_Histidyl-tRNA_synthetase


id: CL:4915
description: Mixed, incl. dCTP deaminase activity, and Histidyl-tRNA synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4915_Mixed,_incl._dCTP_deaminase_activity,_and_Histidyl-tRNA_synthetase


id: CL:493
description: Mixed, incl. rRNA processing, and Sulfur dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:493_Mixed,_incl._rRNA_processing,_and_Sulfur_dioxygenase_activity


id: CL:4933
description: Gag-polyprotein putative aspartyl protease, and Extensin-like protein C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4933_Gag-polyprotein_putative_aspartyl_protease,_and_Extensin-like_protein_C-terminus


id: CL:4945
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Peptidoglycan turnover
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4945_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Peptidoglycan_turnover


id: CL:495
description: Mixed, incl. Sulfur dioxygenase activity, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:495_Mixed,_incl._Sulfur_dioxygenase_activity,_and_tRNA_pseudouridine_synthesis


id: CL:4968
description: Mixed, incl. Activator, and Bacterial dnaA protein helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4968_Mixed,_incl._Activator,_and_Bacterial_dnaA_protein_helix-turn-helix_domain


id: CL:4982
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4982_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Methyltransferase_small_domain


id: CL:4999
description: Mostly uncharacterized, incl. CHAT domain, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:4999_Mostly_uncharacterized,_incl._CHAT_domain,_and_Cytochrome_complex_assembly


id: CL:5000
description: Mostly uncharacterized, incl. CHAT domain, and AzlC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5000_Mostly_uncharacterized,_incl._CHAT_domain,_and_AzlC_protein


id: CL:5002
description: Mixed, incl. Protein of unknown function (DUF4239), and Ether lipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5002_Mixed,_incl._Protein_of_unknown_function_(DUF4239),_and_Ether_lipid_metabolism


id: CL:5021
description: Mixed, incl. CHAT domain, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5021_Mixed,_incl._CHAT_domain,_and_Peptidase_dimerisation_domain


id: CL:5035
description: Mixed, incl. Cytochrome complex assembly, and Prolyl oligopeptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5035_Mixed,_incl._Cytochrome_complex_assembly,_and_Prolyl_oligopeptidase_family


id: CL:5037
description: Phosphodiesterase I activity, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5037_Phosphodiesterase_I_activity,_and_Cytochrome_complex_assembly


id: CL:5068
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5068_Mostly_uncharacterized,_incl._Cationic_antimicrobial_peptide_(CAMP)_resistance,_and_Pyrophosphatase_activity

description:
  Mostly uncharacterized, incl. Cationic antimicrobial peptide (CAMP) resistance, and Pyrophosphatase activity


id: CL:5069
description: Mostly uncharacterized, incl. Protein folding, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5069_Mostly_uncharacterized,_incl._Protein_folding,_and_Ubiquinone


id: CL:5070
description: Mostly uncharacterized, incl. Protein folding, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5070_Mostly_uncharacterized,_incl._Protein_folding,_and_Ubiquinone


id: CL:5071
description: Mostly uncharacterized, incl. Response to copper ion, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5071_Mostly_uncharacterized,_incl._Response_to_copper_ion,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:5073
description: Mostly uncharacterized, incl. PD-(D/E)XK nuclease superfamily, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5073_Mostly_uncharacterized,_incl._PD-(D/E)XK_nuclease_superfamily,_and_lysyl-tRNA_aminoacylation


id: CL:5074
description: Mostly uncharacterized, incl. lysyl-tRNA aminoacylation, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5074_Mostly_uncharacterized,_incl._lysyl-tRNA_aminoacylation,_and_dephospho-CoA_kinase_activity


id: CL:5077
description: Mixed, incl. lysyl-tRNA aminoacylation, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5077_Mixed,_incl._lysyl-tRNA_aminoacylation,_and_dephospho-CoA_kinase_activity


id: CL:5090
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5090_Mixed,_incl._Ligase_activity,_forming_nitrogen-metal_bonds,_and_Site-specific_DNA-methyltransferase_(adenine-specific)_activity

description:
  Mixed, incl. Ligase activity, forming nitrogen-metal bonds, and Site-specific DNA-methyltransferase (adenine-specific) activity


id: CL:5099
description: PD-(D/E)XK nuclease superfamily, and Exodeoxyribonuclease V complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5099_PD-(D/E)XK_nuclease_superfamily,_and_Exodeoxyribonuclease_V_complex


id: CL:5115
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5115_Mixed,_incl._Response_to_copper_ion,_and_Tim44_is_an_essential_component_of_the_machinery_that_mediates_the_translocation_of_nuclear-encoded_proteins_across_the_mitochondrial_inner_membrane_PUBMED:10430866._Tim44_is_thought_to_bind_phospholipids_of_the_mitochondrial_inner_membrane_both_by_...

description:
  Mixed, incl. Response to copper ion, and Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane PUBMED:10430866. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by ...


id: CL:5116
description: Response to copper ion, and Peptidase family M48
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5116_Response_to_copper_ion,_and_Peptidase_family_M48


id: CL:5127
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5127_Mixed,_incl._Tim44_is_an_essential_component_of_the_machinery_that_mediates_the_translocation_of_nuclear-encoded_proteins_across_the_mitochondrial_inner_membrane_PUBMED:10430866._Tim44_is_thought_to_bind_phospholipids_of_the_mitochondrial_inner_membrane_both_by_...,_and_Peptidoglycan_turnover

description:
  Mixed, incl. Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane PUBMED:10430866. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by ..., and Peptidoglycan turnover


id: CL:5136
description: Mostly uncharacterized, incl. Ribbon-helix-helix domain, and Universal stress protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5136_Mostly_uncharacterized,_incl._Ribbon-helix-helix_domain,_and_Universal_stress_protein_family


id: CL:5137
description: Mixed, incl. Ribbon-helix-helix domain, and Universal stress protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5137_Mixed,_incl._Ribbon-helix-helix_domain,_and_Universal_stress_protein_family


id: CL:5139
description: Mixed, incl. Ribbon-helix-helix domain, and Esterase-like activity of phytase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5139_Mixed,_incl._Ribbon-helix-helix_domain,_and_Esterase-like_activity_of_phytase


id: CL:514
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:514_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: CL:5155
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5155_Mixed,_incl._Universal_stress_protein_family,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis

description:
  Mixed, incl. Universal stress protein family, and Ubiquinone and other terpenoid-quinone biosynthesis


id: CL:5165
description: Mixed, incl. Intracellular septation protein A , and Staphylococcal nuclease homologue
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5165_Mixed,_incl._Intracellular_septation_protein_A_,_and_Staphylococcal_nuclease_homologue


id: CL:5177
description: Mixed, incl. Cell surface, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5177_Mixed,_incl._Cell_surface,_and_Clp_protease


id: CL:5190
description: Mostly uncharacterized, incl. NUDIX domain, and Protein of unknown function (DUF983)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5190_Mostly_uncharacterized,_incl._NUDIX_domain,_and_Protein_of_unknown_function_(DUF983)


id: CL:5191
description: Mostly uncharacterized, incl. NUDIX domain, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5191_Mostly_uncharacterized,_incl._NUDIX_domain,_and_Serine_protease


id: CL:5193
description: Mostly uncharacterized, incl. Polyprenyl synthetase, and Triterpenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5193_Mostly_uncharacterized,_incl._Polyprenyl_synthetase,_and_Triterpenoid_metabolic_process


id: CL:5196
description: Mixed, incl. Triterpenoid metabolic process, and Cell envelope organization
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5196_Mixed,_incl._Triterpenoid_metabolic_process,_and_Cell_envelope_organization


id: CL:5223
description: Mixed, incl. NUDIX domain, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5223_Mixed,_incl._NUDIX_domain,_and_Serine_protease


id: CL:5225
description: Mixed, incl. Serine protease, and Thioesterase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5225_Mixed,_incl._Serine_protease,_and_Thioesterase-like_superfamily


id: CL:5249
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Protein of unknown function (DUF983)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5249_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Protein_of_unknown_function_(DUF983)


id: CL:5265
description: Mostly uncharacterized, incl. GDSL-like Lipase/Acylhydrolase family, and OpgC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5265_Mostly_uncharacterized,_incl._GDSL-like_Lipase/Acylhydrolase_family,_and_OpgC_protein


id: CL:5266
description: Mostly uncharacterized, incl. OpgC protein, and Polysaccharide deacetylase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5266_Mostly_uncharacterized,_incl._OpgC_protein,_and_Polysaccharide_deacetylase


id: CL:5267
description: Mixed, incl. Polysaccharide deacetylase, and Beta-glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5267_Mixed,_incl._Polysaccharide_deacetylase,_and_Beta-glucan_metabolic_process


id: CL:5269
description: Mixed, incl. Beta-glucan metabolic process, and Polysaccharide deacetylase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5269_Mixed,_incl._Beta-glucan_metabolic_process,_and_Polysaccharide_deacetylase


id: CL:5270
description: Mixed, incl. Glycosidase, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5270_Mixed,_incl._Glycosidase,_and_FecR_protein


id: CL:5272
description: Mixed, incl. FecR protein, and Parallel beta-helix repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5272_Mixed,_incl._FecR_protein,_and_Parallel_beta-helix_repeats


id: CL:5293
description: Polysaccharide deacetylase, and UDP-glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5293_Polysaccharide_deacetylase,_and_UDP-glucose_metabolic_process


id: CL:530
description: Mixed, incl. Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:530_Mixed,_incl._Protein_folding,_and_Protein_catabolic_process


id: CL:5309
description: Mixed, incl. Aldo/keto reductase family, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5309_Mixed,_incl._Aldo/keto_reductase_family,_and_DUF218_domain


id: CL:531
description: Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:531_Protein_folding,_and_Protein_catabolic_process


id: CL:532
description: Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:532_Protein_folding,_and_Protein_catabolic_process


id: CL:5322
description: Mixed, incl. OpgC protein, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5322_Mixed,_incl._OpgC_protein,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:5324
description: OpgC protein, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5324_OpgC_protein,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:5326
description: OpgC protein, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5326_OpgC_protein,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:533
description: Protein folding, and HslUV protease complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:533_Protein_folding,_and_HslUV_protease_complex


id: CL:535
description: Protein folding, and HslUV protease complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:535_Protein_folding,_and_HslUV_protease_complex


id: CL:5351
description: Mixed, incl. GDSL-like Lipase/Acylhydrolase family, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5351_Mixed,_incl._GDSL-like_Lipase/Acylhydrolase_family,_and_RNA_ligase_activity


id: CL:5353
description: Mixed, incl. RNA ligase activity, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5353_Mixed,_incl._RNA_ligase_activity,_and_FtsX-like_permease_family


id: CL:5365
description: Mixed, incl. tryptophan-tRNA ligase activity, and Transglycosylase associated protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5365_Mixed,_incl._tryptophan-tRNA_ligase_activity,_and_Transglycosylase_associated_protein


id: CL:537
description: Protein folding chaperone, and Adenyl-nucleotide exchange factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:537_Protein_folding_chaperone,_and_Adenyl-nucleotide_exchange_factor_activity


id: CL:538
description: Protein folding chaperone, and DnaJ C terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:538_Protein_folding_chaperone,_and_DnaJ_C_terminal_domain


id: CL:5383
description: Mixed, incl. Coiled coil, and Cellular polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5383_Mixed,_incl._Coiled_coil,_and_Cellular_polysaccharide_biosynthetic_process


id: CL:5384
description: Mixed, incl. Signal, and Cellular polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5384_Mixed,_incl._Signal,_and_Cellular_polysaccharide_biosynthetic_process


id: CL:5385
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5385_Mostly_uncharacterized,_incl._Cellular_polysaccharide_biosynthetic_process,_and_Antibiotic_biosynthetic_process

description:
  Mostly uncharacterized, incl. Cellular polysaccharide biosynthetic process, and Antibiotic biosynthetic process


id: CL:5386
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5386_Mostly_uncharacterized,_incl._Antibiotic_biosynthetic_process,_and_Lipopolysaccharide_biosynthetic_process

description:
  Mostly uncharacterized, incl. Antibiotic biosynthetic process, and Lipopolysaccharide biosynthetic process


id: CL:5388
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5388_Mostly_uncharacterized,_incl._Antibiotic_biosynthetic_process,_and_Lipopolysaccharide_biosynthetic_process

description:
  Mostly uncharacterized, incl. Antibiotic biosynthetic process, and Lipopolysaccharide biosynthetic process


id: CL:5389
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5389_Mostly_uncharacterized,_incl._Lipopolysaccharide_biosynthetic_process,_and_Antibiotic_biosynthetic_process

description:
  Mostly uncharacterized, incl. Lipopolysaccharide biosynthetic process, and Antibiotic biosynthetic process


id: CL:539
description: Protein folding chaperone, and DnaJ C terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:539_Protein_folding_chaperone,_and_DnaJ_C_terminal_domain


id: CL:5390
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5390_Mostly_uncharacterized,_incl._Lipopolysaccharide_biosynthetic_process,_and_Fluoride_transmembrane_transport

description:
  Mostly uncharacterized, incl. Lipopolysaccharide biosynthetic process, and Fluoride transmembrane transport


id: CL:5393
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5393_Mostly_uncharacterized,_incl._Lipopolysaccharide_biosynthetic_process,_and_Fluoride_transmembrane_transport

description:
  Mostly uncharacterized, incl. Lipopolysaccharide biosynthetic process, and Fluoride transmembrane transport


id: CL:5395
description: Mostly uncharacterized, incl. Dolichyl-phosphate-mannose-protein mannosyltransferase, and dUTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5395_Mostly_uncharacterized,_incl._Dolichyl-phosphate-mannose-protein_mannosyltransferase,_and_dUTPase


id: CL:5400
description: Mixed, incl. dUTPase, and Cysteine rich repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5400_Mixed,_incl._dUTPase,_and_Cysteine_rich_repeat


id: CL:5405
description: Mixed, incl. Acetyltransferase (GNAT) family, and Protein of unknown function (DUF1236)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5405_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Protein_of_unknown_function_(DUF1236)


id: CL:5424
description: Mixed, incl. MazG nucleotide pyrophosphohydrolase domain, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5424_Mixed,_incl._MazG_nucleotide_pyrophosphohydrolase_domain,_and_IrrE_N-terminal-like_domain


id: CL:5441
description: Mixed, incl. Lipopolysaccharide core region metabolic process, and GYD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5441_Mixed,_incl._Lipopolysaccharide_core_region_metabolic_process,_and_GYD_domain


id: CL:5442
description: Mixed, incl. Sulfatase, and Domain of unknown function DUF302
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5442_Mixed,_incl._Sulfatase,_and_Domain_of_unknown_function_DUF302


id: CL:5445
description: Mixed, incl. Sulfatase, and Domain of unknown function DUF302
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5445_Mixed,_incl._Sulfatase,_and_Domain_of_unknown_function_DUF302


id: CL:5462
description: Mixed, incl. O-Antigen ligase, and MAPEG family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5462_Mixed,_incl._O-Antigen_ligase,_and_MAPEG_family


id: CL:548
description: Protein folding chaperone, and GrpE
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:548_Protein_folding_chaperone,_and_GrpE


id: CL:5486
description: Mixed, incl. Glucose / Sorbosone dehydrogenase, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5486_Mixed,_incl._Glucose_/_Sorbosone_dehydrogenase,_and_Response_to_pH


id: CL:5496
description: Mixed, incl. Antibiotic biosynthetic process, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5496_Mixed,_incl._Antibiotic_biosynthetic_process,_and_Radical_SAM_superfamily


id: CL:5499
description: Mixed, incl. Radical SAM superfamily, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5499_Mixed,_incl._Radical_SAM_superfamily,_and_FecR_protein


id: CL:5522
description: Mixed, incl. Aminotransferase class I and II, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5522_Mixed,_incl._Aminotransferase_class_I_and_II,_and_Sulfite_exporter_TauE/SafE


id: CL:5536
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5536_Mixed,_incl._Response_to_ionizing_radiation,_and_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond

description:
  Mixed, incl. Response to ionizing radiation, and Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond


id: CL:5547
description: Mostly uncharacterized, incl. Ubiquinone biosynthesis complex, and Response to biotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5547_Mostly_uncharacterized,_incl._Ubiquinone_biosynthesis_complex,_and_Response_to_biotic_stimulus


id: CL:5549
description: Mostly uncharacterized, incl. GYD domain, and S-ribosylhomocysteine lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5549_Mostly_uncharacterized,_incl._GYD_domain,_and_S-ribosylhomocysteine_lyase_activity


id: CL:5550
description: Mixed, incl. GYD domain, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5550_Mixed,_incl._GYD_domain,_and_Methyltransferase_small_domain


id: CL:5561
description: Mixed, incl. S-ribosylhomocysteine lyase activity, and Domain of unknown function (DUF892)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5561_Mixed,_incl._S-ribosylhomocysteine_lyase_activity,_and_Domain_of_unknown_function_(DUF892)


id: CL:557
description: Mixed, incl. GrpE, and MreB/Mbl protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:557_Mixed,_incl._GrpE,_and_MreB/Mbl_protein


id: CL:5577
description: Mixed, incl. Demethylmenaquinone methyltransferase activity, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5577_Mixed,_incl._Demethylmenaquinone_methyltransferase_activity,_and_Methyltransferase_domain


id: CL:5590
description: Mostly uncharacterized, incl. Sporulation, and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5590_Mostly_uncharacterized,_incl._Sporulation,_and_CsbD-like


id: CL:5591
description: Mixed, incl. Sporulation, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5591_Mixed,_incl._Sporulation,_and_Response_to_osmotic_stress


id: CL:5592
description: Mixed, incl. Sporulation, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5592_Mixed,_incl._Sporulation,_and_Response_to_osmotic_stress


id: CL:5593
description: Mixed, incl. Sporulation, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5593_Mixed,_incl._Sporulation,_and_Response_to_osmotic_stress


id: CL:5595
description: Protein of unknown function (DUF1328), and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5595_Protein_of_unknown_function_(DUF1328),_and_CsbD-like


id: CL:5611
description: Mixed, incl. Response to osmotic stress, and PRC-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5611_Mixed,_incl._Response_to_osmotic_stress,_and_PRC-barrel_domain


id: CL:5622
description: Mixed, incl. NADPH-dependent FMN reductase, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5622_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_N-acetyltransferase_activity


id: CL:5631
description: Mixed, incl. GCN5-related N-acetyl-transferase, and MAPEG family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5631_Mixed,_incl._GCN5-related_N-acetyl-transferase,_and_MAPEG_family


id: CL:5645
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5645_Mixed,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2171),_and_Dyp-type_peroxidase_family

description:
  Mixed, incl. Uncharacterized protein conserved in bacteria (DUF2171), and Dyp-type peroxidase family


id: CL:5647
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5647_Mixed,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2171),_and_MerR_HTH_family_regulatory_protein

description:
  Mixed, incl. Uncharacterized protein conserved in bacteria (DUF2171), and MerR HTH family regulatory protein


id: CL:5662
description: Mixed, incl. Bacterial protein of unknown function (DUF937), and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5662_Mixed,_incl._Bacterial_protein_of_unknown_function_(DUF937),_and_CsbD-like


id: CL:5682
description: Lectin, and Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5682_Lectin,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:569
description: HslUV protease complex, and Found in ATP-dependent protease La (LON)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:569_HslUV_protease_complex,_and_Found_in_ATP-dependent_protease_La_(LON)


id: CL:5696
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5696_Mostly_uncharacterized,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2147),_and_Aminoacyl-tRNA_editing_domain

description:
  Mostly uncharacterized, incl. Uncharacterized protein conserved in bacteria (DUF2147), and Aminoacyl-tRNA editing domain


id: CL:5697
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5697_Mixed,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2147),_and_Cobalamin-independent_synthase,_Catalytic_domain

description:
  Mixed, incl. Uncharacterized protein conserved in bacteria (DUF2147), and Cobalamin-independent synthase, Catalytic domain


id: CL:5698
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5698_Mixed,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2147),_and_Cobalamin-independent_synthase,_Catalytic_domain

description:
  Mixed, incl. Uncharacterized protein conserved in bacteria (DUF2147), and Cobalamin-independent synthase, Catalytic domain


id: CL:5711
description: Mixed, incl. DNA N-glycosylase activity, and Negative regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5711_Mixed,_incl._DNA_N-glycosylase_activity,_and_Negative_regulation_of_molecular_function


id: CL:5720
description: Mixed, incl. Aminoacyl-tRNA editing domain, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5720_Mixed,_incl._Aminoacyl-tRNA_editing_domain,_and_L,D-transpeptidase_catalytic_domain


id: CL:5731
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5731_Mostly_uncharacterized,_incl._Sporulation,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Mostly uncharacterized, incl. Sporulation, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:5732
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5732_Mostly_uncharacterized,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_Nucleobase_transport

description:
  Mostly uncharacterized, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and Nucleobase transport


id: CL:5734
description: Mixed, incl. Nucleobase transport, and Lactoylglutathione lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5734_Mixed,_incl._Nucleobase_transport,_and_Lactoylglutathione_lyase_activity


id: CL:5750
description: Mixed, incl. AraC-like ligand binding domain, and NIPSNAP
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5750_Mixed,_incl._AraC-like_ligand_binding_domain,_and_NIPSNAP


id: CL:5764
description: Mixed, incl. Putative zinc- or iron-chelating domain, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5764_Mixed,_incl._Putative_zinc-_or_iron-chelating_domain,_and_Peptidyl-serine_acetylation


id: CL:5780
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5780_Mixed,_incl._Antigen_processing-Cross_presentation,_and_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins

description:
  Mixed, incl. Antigen processing-Cross presentation, and Protein quality control for misfolded or incompletely synthesized proteins


id: CL:5781
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5781_Mixed,_incl._Protein_self-association,_and_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins

description:
  Mixed, incl. Protein self-association, and Protein quality control for misfolded or incompletely synthesized proteins


id: CL:5782
description: Mixed, incl. Protein self-association, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5782_Mixed,_incl._Protein_self-association,_and_Glyoxalase-like_domain


id: CL:5784
description: Mixed, incl. Protein self-association, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5784_Mixed,_incl._Protein_self-association,_and_Glyoxalase-like_domain


id: CL:5800
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5800_Mixed,_incl._Found_in_ATP-dependent_protease_La_(LON),_and_Short_repeat_of_unknown_function_(DUF308)

description:
  Mixed, incl. Found in ATP-dependent protease La (LON), and Short repeat of unknown function (DUF308)


id: CL:5811
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5811_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins,_and_Tricarboxylic_acid_cycle

description:
  Protein quality control for misfolded or incompletely synthesized proteins, and Tricarboxylic acid cycle


id: CL:5824
description: Mostly uncharacterized, incl. Lactone catabolic process, and Glutamine amidotransferase class-I
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5824_Mostly_uncharacterized,_incl._Lactone_catabolic_process,_and_Glutamine_amidotransferase_class-I


id: CL:5827
description: Mixed, incl. Lactone catabolic process, and Glutamine amidotransferase class-I
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5827_Mixed,_incl._Lactone_catabolic_process,_and_Glutamine_amidotransferase_class-I


id: CL:5853
description: Mixed, incl. glycyl-tRNA aminoacylation, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5853_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Protein_dephosphorylation


id: CL:5855
description: Mixed, incl. glycyl-tRNA aminoacylation, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5855_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Clp_protease


id: CL:586
description: ATP-dependent Clp protease adaptor protein ClpS, and Protein unfolding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:586_ATP-dependent_Clp_protease_adaptor_protein_ClpS,_and_Protein_unfolding


id: CL:5888
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5888_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5889
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5889_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5890
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5890_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5891
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5891_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
  Branched-chain amino acid transport system / permease component, and Periplasmic binding protein domain


id: CL:5892
description: Mixed, incl. Branched-chain amino acid transport system / permease component, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5892_Mixed,_incl._Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leucine_binding


id: CL:5893
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5893_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
  Branched-chain amino acid transport system / permease component, and Periplasmic binding protein domain


id: CL:5894
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5894_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
  Branched-chain amino acid transport system / permease component, and Periplasmic binding protein domain


id: CL:5895
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5895_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5896
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5896_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5897
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5897_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5898
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5898_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5899
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5899_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5900
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5900_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5901
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5901_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5902
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5902_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5903
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5903_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:5905
description: Mixed, incl. Branched-chain amino acid ATP-binding cassette transporter, and Amide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5905_Mixed,_incl._Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Amide_binding


id: CL:5931
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5931_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transport system / permease component


id: CL:5945
description: Mixed, incl. Leucine binding, and Branched-chain amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5945_Mixed,_incl._Leucine_binding,_and_Branched-chain_amino_acid_transmembrane_transporter_activity


id: CL:5955
description: Branched-chain amino acid transport system / permease component, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5955_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leucine_binding


id: CL:5965
description: Branched-chain amino acid transport system / permease component, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5965_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leucine_binding


id: CL:597
description: FtsH Extracellular, and Prohibitin homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:597_FtsH_Extracellular,_and_Prohibitin_homologues


id: CL:5974
description: Branched-chain amino acid transport, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5974_Branched-chain_amino_acid_transport,_and_Leucine_binding


id: CL:5983
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5983_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transport system / permease component


id: CL:5992
description: Mixed, incl. Anthranilate metabolic process, and Amide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:5992_Mixed,_incl._Anthranilate_metabolic_process,_and_Amide_binding


id: CL:6001
description: Mixed, incl. Branched-chain amino acid transport, and Receptor family ligand binding region
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6001_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Receptor_family_ligand_binding_region


id: CL:6002
description: Amide binding, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6002_Amide_binding,_and_Branched-chain_amino_acid_transport


id: CL:6011
description: Receptor family ligand binding region, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6011_Receptor_family_ligand_binding_region,_and_Branched-chain_amino_acid_transport


id: CL:6020
description: Periplasmic binding protein, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6020_Periplasmic_binding_protein,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:6030
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6030_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transport system / permease component


id: CL:6040
description: Mixed, incl. Leucine binding, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6040_Mixed,_incl._Leucine_binding,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:6043
description: Branched-chain amino acid transport system / permease component, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6043_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leucine_binding


id: CL:6054
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6054_Mixed,_incl._Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Fatty_acid_ligase_activity

description:
  Mixed, incl. Branched-chain amino acid ATP-binding cassette transporter, and Fatty acid ligase activity


id: CL:6063
description: Amide binding, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6063_Amide_binding,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:6072
description: Mixed, incl. Branched-chain amino acid transport system / permease component, and Amide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6072_Mixed,_incl._Branched-chain_amino_acid_transport_system_/_permease_component,_and_Amide_binding


id: CL:6073
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6073_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:6082
description: Amide binding, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6082_Amide_binding,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:6091
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6091_Mixed,_incl._Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Mixed, incl. Periplasmic binding protein domain, and Branched-chain amino acid transport system / permease component


id: CL:6094
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6094_Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Periplasmic binding protein domain, and Branched-chain amino acid transport system / permease component


id: CL:6095
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6095_Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Periplasmic binding protein domain, and Branched-chain amino acid transport system / permease component


id: CL:6107
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6107_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:612
description: Protein-disulfide reductase activity, and Protein self-association
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:612_Protein-disulfide_reductase_activity,_and_Protein_self-association


id: CL:6120
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6120_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
[cell repeats an earlier one in this file: 103 characters]


id: CL:6134
description: Branched-chain amino acid transport system / permease component, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6134_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leucine_binding


id: CL:6145
description: Mixed, incl. CoA-ligase activity, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6145_Mixed,_incl._CoA-ligase_activity,_and_Leucine_binding


id: CL:6146
description: Mixed, incl. Fatty acid ligase activity, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6146_Mixed,_incl._Fatty_acid_ligase_activity,_and_Leucine_binding


id: CL:6148
description: Branched-chain amino acid transport system / permease component, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6148_Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leucine_binding


id: CL:6159
description: Mixed, incl. Leucine binding, and Branched-chain amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6159_Mixed,_incl._Leucine_binding,_and_Branched-chain_amino_acid_transmembrane_transporter_activity


id: CL:6171
description: Mixed, incl. Periplasmic binding protein, and Fatty acid ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6171_Mixed,_incl._Periplasmic_binding_protein,_and_Fatty_acid_ligase_activity


id: CL:6186
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6186_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
[cell repeats an earlier one in this file: 127 characters]


id: CL:6199
description: Mixed, incl. Amide binding, and Formamidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6199_Mixed,_incl._Amide_binding,_and_Formamidase_activity


id: CL:6201
description: Mixed, incl. ABC transporter, and Amide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6201_Mixed,_incl._ABC_transporter,_and_Amide_binding


id: CL:6213
description: Amide binding, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6213_Amide_binding,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:6224
description: Amide binding, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6224_Amide_binding,_and_Branched-chain_amino_acid_transport


id: CL:6239
description: Mixed, incl. Amino acid synthesis, and Pyridine-containing compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6239_Mixed,_incl._Amino_acid_synthesis,_and_Pyridine-containing_compound_catabolic_process


id: CL:6241
description: Amino acid synthesis, and NADP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6241_Amino_acid_synthesis,_and_NADP_catabolic_process


id: CL:6266
description: ABC transporters, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6266_ABC_transporters,_and_Sulfate_assimilation


id: CL:6267
description: ABC transporters, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6267_ABC_transporters,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:6268
description: ABC transporters, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6268_ABC_transporters,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:6269
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6269_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Binding-protein-dependent transport system inner membrane component


id: CL:6270
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6270_Mixed,_incl._Binding-protein-dependent_transport_system_inner_membrane_component,_and_ATP-binding_cassette_(ABC)_transporter_complex

description:
  Mixed, incl. Binding-protein-dependent transport system inner membrane component, and ATP-binding cassette (ABC) transporter complex


id: CL:6271
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6271_Mixed,_incl._Binding-protein-dependent_transport_system_inner_membrane_component,_and_ATP-binding_cassette_(ABC)_transporter_complex

description:
  Mixed, incl. Binding-protein-dependent transport system inner membrane component, and ATP-binding cassette (ABC) transporter complex


id: CL:6272
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Inorganic anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6272_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Inorganic_anion_transport


id: CL:6273
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6273_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Nickel cation transmembrane transporter activity


id: CL:6275
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6275_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Nickel cation transmembrane transporter activity


id: CL:6277
description: Mixed, incl. Bacterial extracellular solute-binding proteins, family 5 Middle, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6277_Mixed,_incl._Bacterial_extracellular_solute-binding_proteins,_family_5_Middle,_and_Amide_transport


id: CL:6279
description: Amide transmembrane transporter activity, and Oligopeptide/dipeptide transporter, C-terminal region
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6279_Amide_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: CL:6289
description: Nickel cation transmembrane transporter activity, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6289_Nickel_cation_transmembrane_transporter_activity,_and_Amide_transport


id: CL:6306
description: Ligand-gated channel activity, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6306_Ligand-gated_channel_activity,_and_ABC-type_amino_acid_transporter_activity


id: CL:6330
description: Mixed, incl. Phosphate ion transport, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6330_Mixed,_incl._Phosphate_ion_transport,_and_Molybdate_ion_transport


id: CL:6331
description: Mixed, incl. Molybdate ion transport, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6331_Mixed,_incl._Molybdate_ion_transport,_and_ABC_3_transport_family


id: CL:6333
description: Molybdate ion transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6333_Molybdate_ion_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:6361
description: Mixed, incl. ABC-type transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6361_Mixed,_incl._ABC-type_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:6364
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6364_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity


id: CL:6366
description: glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6366_glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity


id: CL:640
description: rRNA processing, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:640_rRNA_processing,_and_Chromosome_segregation


id: CL:6403
description: Mixed, incl. TOBE domain, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6403_Mixed,_incl._TOBE_domain,_and_ABC-type_carbohydrate_transporter_activity


id: CL:6415
description: Mixed, incl. Periplasmic binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6415_Mixed,_incl._Periplasmic_binding_protein,_and_TOBE_domain


id: CL:642
description: Mixed, incl. Chromosome partition, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:642_Mixed,_incl._Chromosome_partition,_and_Sister_chromatid_cohesion


id: CL:6438
description: Mixed, incl. ABC-2 family transporter protein, and Domain of unknown function (DUF4189)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6438_Mixed,_incl._ABC-2_family_transporter_protein,_and_Domain_of_unknown_function_(DUF4189)


id: CL:6452
description: Mixed, incl. ABC transporter transmembrane region, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6452_Mixed,_incl._ABC_transporter_transmembrane_region,_and_Phospholipid_transport


id: CL:6454
description: Mixed, incl. ABC transporter transmembrane region, and Sodium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6454_Mixed,_incl._ABC_transporter_transmembrane_region,_and_Sodium_ion_transport


id: CL:6455
description: Mixed, incl. Sodium ion transport, and Beta-glucan transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6455_Mixed,_incl._Sodium_ion_transport,_and_Beta-glucan_transport


id: CL:6468
description: Nucleoside monophosphate phosphorylation, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6468_Nucleoside_monophosphate_phosphorylation,_and_Calcium_ion_binding


id: CL:6482
description: Mixed, incl. Phospholipid transport, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6482_Mixed,_incl._Phospholipid_transport,_and_Lipoprotein_transport


id: CL:6484
description: Beta-glucan transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6484_Beta-glucan_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:6511
description: Mixed, incl. MacB-like periplasmic core domain, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6511_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_Lipoprotein_transport


id: CL:6520
description: Sulfur metabolism, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6520_Sulfur_metabolism,_and_Nitrogen_metabolism


id: CL:6522
description: Sulfur metabolism, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6522_Sulfur_metabolism,_and_Nitrogen_metabolism


id: CL:6523
description: Sulfur metabolism, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6523_Sulfur_metabolism,_and_Nitrogen_metabolism


id: CL:6524
description: Mixed, incl. Nitrogen metabolism, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6524_Mixed,_incl._Nitrogen_metabolism,_and_Alkanesulfonate_transport


id: CL:6525
description: Mixed, incl. Alkanesulfonate transport, and Alkanesulfonate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6525_Mixed,_incl._Alkanesulfonate_transport,_and_Alkanesulfonate_transmembrane_transporter_activity


id: CL:6526
description: Mixed, incl. Alkanesulfonate transport, and Alkanesulfonate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6526_Mixed,_incl._Alkanesulfonate_transport,_and_Alkanesulfonate_transmembrane_transporter_activity


id: CL:6528
description: Alkanesulfonate transport, and Alkanesulfonate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6528_Alkanesulfonate_transport,_and_Alkanesulfonate_transmembrane_transporter_activity


id: CL:6548
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6548_Bacterial_periplasmic_substrate-binding_proteins,_and_Alkanesulfonate_transmembrane_transporter_activity

description:
  Bacterial periplasmic substrate-binding proteins, and Alkanesulfonate transmembrane transporter activity


id: CL:6560
description: Mixed, incl. BFD-like [2Fe-2S] binding domain, and NMT1-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6560_Mixed,_incl._BFD-like_[2Fe-2S]_binding_domain,_and_NMT1-like_family


id: CL:658
description: Mixed, incl. Methyltransferase small domain, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:658_Mixed,_incl._Methyltransferase_small_domain,_and_Host_cell


id: CL:6580
description: Sulfate transport, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6580_Sulfate_transport,_and_Sulfate_assimilation


id: CL:6581
description: ABC-type sulfate transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6581_ABC-type_sulfate_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:6609
description: Domain of unknown function (DUF1989), and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6609_Domain_of_unknown_function_(DUF1989),_and_NMT1/THI5_like


id: CL:6630
description: Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6630_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain,_and_NMT1/THI5_like


id: CL:6647
description: Organic phosphonate metabolic process, and Organic phosphonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6647_Organic_phosphonate_metabolic_process,_and_Organic_phosphonate_transport


id: CL:6649
description: Organic phosphonate metabolic process, and ITP diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6649_Organic_phosphonate_metabolic_process,_and_ITP_diphosphatase_activity


id: CL:6653
description: Organic phosphonate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6653_Organic_phosphonate_metabolic_process


id: CL:6679
description: ABC-type phosphonate transporter activity, and Gluconate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6679_ABC-type_phosphonate_transporter_activity,_and_Gluconate_dehydrogenase_activity


id: CL:669
description: Mixed, incl. Glutathione metabolic process, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:669_Mixed,_incl._Glutathione_metabolic_process,_and_Selenocompound_metabolism


id: CL:6706
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6706_Mixed,_incl._Furfural_degradation,_and_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain

description:
  Mixed, incl. Furfural degradation, and Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain


id: CL:6708
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6708_Mixed,_incl._Furfural_degradation,_and_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain

description:
  Mixed, incl. Furfural degradation, and Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain


id: CL:6709
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6709_Mixed,_incl._Furfural_degradation,_and_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain

description:
  Mixed, incl. Furfural degradation, and Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain


id: CL:671
description: Glutathione metabolic process, and tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:671_Glutathione_metabolic_process,_and_tRNA_aminoacylation


id: CL:6710
description: Furfural degradation, and Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6710_Furfural_degradation,_and_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain


id: CL:6711
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6711_Mixed,_incl._Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain,_and_[2Fe-2S]_binding_domain

description:
  Mixed, incl. Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain, and [2Fe-2S] binding domain


id: CL:6712
description: Purine nucleobase metabolic process, and Furfural degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6712_Purine_nucleobase_metabolic_process,_and_Furfural_degradation


id: CL:6714
description: Purine ribonucleoside salvage, and CO dehydrogenase flavoprotein C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6714_Purine_ribonucleoside_salvage,_and_CO_dehydrogenase_flavoprotein_C-terminal_domain


id: CL:6716
description: [2Fe-2S] binding domain, and Purine ribonucleoside salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6716_[2Fe-2S]_binding_domain,_and_Purine_ribonucleoside_salvage


id: CL:673
description: Glutathione metabolic process, and tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:673_Glutathione_metabolic_process,_and_tRNA_aminoacylation


id: CL:6738
description: Furfural degradation, and Hypoxanthine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6738_Furfural_degradation,_and_Hypoxanthine_metabolic_process


id: CL:6740
description: Mixed, incl. Hypoxanthine metabolic process, and Cytidylyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6740_Mixed,_incl._Hypoxanthine_metabolic_process,_and_Cytidylyltransferase


id: CL:675
description: Glutathione metabolic process, and Anticodon-binding domain of tRNA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:675_Glutathione_metabolic_process,_and_Anticodon-binding_domain_of_tRNA_ligase


id: CL:6760
description: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain, and [2Fe-2S] binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6760_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain,_and_[2Fe-2S]_binding_domain


id: CL:678
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:678_Mixed,_incl._Glutathione_S-transferase,_N-terminal_domain,_and_Glutathione_S-transferase,_N-terminal_domain

description:
  Mixed, incl. Glutathione S-transferase, N-terminal domain, and Glutathione S-transferase, N-terminal domain


id: CL:6791
description: Lactonohydrolase activity, and Furfural degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6791_Lactonohydrolase_activity,_and_Furfural_degradation


id: CL:6804
description: Mixed, incl. F420-0 metabolic process, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6804_Mixed,_incl._F420-0_metabolic_process,_and_Coenzyme_A_transferase


id: CL:6806
description: F420-0 metabolic process, and Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6806_F420-0_metabolic_process,_and_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: CL:681
description: aminoacyl-tRNA ligase activity, and Glutathione S-transferase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:681_aminoacyl-tRNA_ligase_activity,_and_Glutathione_S-transferase,_N-terminal_domain


id: CL:6836
description: Mostly uncharacterized, incl. Histidine catabolic process, and UTRA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6836_Mostly_uncharacterized,_incl._Histidine_catabolic_process,_and_UTRA_domain


id: CL:6838
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6838_Mixed,_incl._Histidine_catabolic_process,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines

description:
  Mixed, incl. Histidine catabolic process, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines


id: CL:6856
description: Mixed, incl. Nitronate monooxygenase, and Bacterial extracellular solute-binding proteins, family 3
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6856_Mixed,_incl._Nitronate_monooxygenase,_and_Bacterial_extracellular_solute-binding_proteins,_family_3


id: CL:6869
description: Mostly uncharacterized, incl. Ppx/GppA phosphatase family, and Phosphate transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6869_Mostly_uncharacterized,_incl._Ppx/GppA_phosphatase_family,_and_Phosphate_transporter_family


id: CL:6873
description: Mixed, incl. Ppx/GppA phosphatase family, and Phosphate transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6873_Mixed,_incl._Ppx/GppA_phosphatase_family,_and_Phosphate_transporter_family


id: CL:6875
description: Ppx/GppA phosphatase family, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6875_Ppx/GppA_phosphatase_family,_and_Polyphosphate_kinase_activity


id: CL:690
description: tRNA synthetases class I (I, L, M and V), and arginyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:690_tRNA_synthetases_class_I_(I,_L,_M_and_V),_and_arginyl-tRNA_aminoacylation


id: CL:6902
description: Mixed, incl. CobW/HypB/UreG, nucleotide-binding domain, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6902_Mixed,_incl._CobW/HypB/UreG,_nucleotide-binding_domain,_and_MgtC_family


id: CL:6919
description: Mostly uncharacterized, incl. ArsC family, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6919_Mostly_uncharacterized,_incl._ArsC_family,_and_HIT_domain


id: CL:6921
description: Mixed, incl. ArsC family, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6921_Mixed,_incl._ArsC_family,_and_RNA_ligase_activity


id: CL:6940
description: Mixed, incl. HIT domain, and Leucyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6940_Mixed,_incl._HIT_domain,_and_Leucyltransferase_activity


id: CL:6960
description: Mixed, incl. Cellular iron ion homeostasis, and BFD-like [2Fe-2S] binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6960_Mixed,_incl._Cellular_iron_ion_homeostasis,_and_BFD-like_[2Fe-2S]_binding_domain


id: CL:6961
description: Mixed, incl. BFD-like [2Fe-2S] binding domain, and Oxidoreductase activity, acting on metal ions
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6961_Mixed,_incl._BFD-like_[2Fe-2S]_binding_domain,_and_Oxidoreductase_activity,_acting_on_metal_ions


id: CL:6972
description: Mixed, incl. Heme oxygenase (decyclizing) activity, and Helix_turn_helix, mercury resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6972_Mixed,_incl._Heme_oxygenase_(decyclizing)_activity,_and_Helix_turn_helix,_mercury_resistance


id: CL:6988
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6988_Mostly_uncharacterized,_incl._Cyclopropane-fatty-acyl-phospholipid_synthase_activity,_and_Helix_turn_helix_ASNC_type

description:
  Mostly uncharacterized, incl. Cyclopropane-fatty-acyl-phospholipid synthase activity, and Helix_turn_helix ASNC type


id: CL:6989
description: Mixed, incl. Cyclopropane-fatty-acyl-phospholipid synthase activity, and Helix_turn_helix ASNC type
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6989_Mixed,_incl._Cyclopropane-fatty-acyl-phospholipid_synthase_activity,_and_Helix_turn_helix_ASNC_type


id: CL:6990
description: Mixed, incl. Cyclopropane-fatty-acyl-phospholipid synthase activity, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6990_Mixed,_incl._Cyclopropane-fatty-acyl-phospholipid_synthase_activity,_and_Nucleus


id: CL:6991
description: Mixed, incl. Cyclopropane-fatty-acyl-phospholipid synthase activity, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6991_Mixed,_incl._Cyclopropane-fatty-acyl-phospholipid_synthase_activity,_and_Steroid_biosynthesis


id: CL:6995
description: Cyclopropane-fatty-acyl-phospholipid synthase activity, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:6995_Cyclopropane-fatty-acyl-phospholipid_synthase_activity,_and_Steroid_biosynthesis


id: CL:7008
description: Mixed, incl. Omega peptidase activity, and Helix-hairpin-helix DNA-binding motif class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7008_Mixed,_incl._Omega_peptidase_activity,_and_Helix-hairpin-helix_DNA-binding_motif_class_1


id: CL:7020
description: Mixed, incl. AAA domain, and SbmA/BacA-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7020_Mixed,_incl._AAA_domain,_and_SbmA/BacA-like_family


id: CL:7031
description: Mixed, incl. Helix_turn_helix ASNC type, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7031_Mixed,_incl._Helix_turn_helix_ASNC_type,_and_Enzyme_binding


id: CL:7032
description: Helix_turn_helix ASNC type, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7032_Helix_turn_helix_ASNC_type,_and_Enzyme_binding


id: CL:7034
description: Enzyme binding, and Saccharopine dehydrogenase NADP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7034_Enzyme_binding,_and_Saccharopine_dehydrogenase_NADP_binding_domain


id: CL:7052
description: Mixed, incl. Ku70/Ku80 beta-barrel domain, and Staphylococcal nuclease homologue
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7052_Mixed,_incl._Ku70/Ku80_beta-barrel_domain,_and_Staphylococcal_nuclease_homologue


id: CL:7062
description: Mostly uncharacterized, incl. Pirin C-terminal cupin domain, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7062_Mostly_uncharacterized,_incl._Pirin_C-terminal_cupin_domain,_and_Aminoacyl-tRNA_editing_domain


id: CL:7063
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7063_Mostly_uncharacterized,_incl._Pirin_C-terminal_cupin_domain,_and_Bacterial_protein_of_unknown_function_(DUF937)

description:
  Mostly uncharacterized, incl. Pirin C-terminal cupin domain, and Bacterial protein of unknown function (DUF937)


id: CL:7065
description: Mixed, incl. Methyltransferase domain, and Natural resistance-associated macrophage protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7065_Mixed,_incl._Methyltransferase_domain,_and_Natural_resistance-associated_macrophage_protein


id: CL:7079
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7079_Mixed,_incl._Bacterial_protein_of_unknown_function_(DUF937),_and_Glutathione_S-transferase,_C-terminal_domain

description:
  Mixed, incl. Bacterial protein of unknown function (DUF937), and Glutathione S-transferase, C-terminal domain


id: CL:7092
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7092_Mixed,_incl._Aminoacyl-tRNA_editing_domain,_and_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity

description:
  Mixed, incl. Aminoacyl-tRNA editing domain, and 5,10-methylenetetrahydrofolate-dependent methyltransferase activity


id: CL:7101
description: Mixed, incl. Transglutaminase/protease-like homologues, and Peptide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7101_Mixed,_incl._Transglutaminase/protease-like_homologues,_and_Peptide_catabolic_process


id: CL:7102
description: Mixed, incl. Peptide catabolic process, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7102_Mixed,_incl._Peptide_catabolic_process,_and_Aminopeptidase


id: CL:7104
description: Mixed, incl. Peptide catabolic process, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7104_Mixed,_incl._Peptide_catabolic_process,_and_Aminopeptidase


id: CL:7106
description: Mixed, incl. Peptide catabolic process, and Cytosol aminopeptidase family, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7106_Mixed,_incl._Peptide_catabolic_process,_and_Cytosol_aminopeptidase_family,_catalytic_domain


id: CL:7109
description: Gamma-glutamyltranspeptidase, and Cytosol aminopeptidase family, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7109_Gamma-glutamyltranspeptidase,_and_Cytosol_aminopeptidase_family,_catalytic_domain


id: CL:7142
description: Mixed, incl. Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7142_Mixed,_incl._Peptidase_dimerisation_domain


id: CL:7151
description: Mixed, incl. Transglutaminase/protease-like homologues, and Circularly permuted ATP-grasp type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7151_Mixed,_incl._Transglutaminase/protease-like_homologues,_and_Circularly_permuted_ATP-grasp_type_2


id: CL:7153
description: Transglutaminase/protease-like homologues, and Circularly permuted ATP-grasp type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7153_Transglutaminase/protease-like_homologues,_and_Circularly_permuted_ATP-grasp_type_2


id: CL:7182
description: Mixed, incl. Transmembrane transporter activity, and Regulation of nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7182_Mixed,_incl._Transmembrane_transporter_activity,_and_Regulation_of_nitrogen_utilization


id: CL:7184
description: Mixed, incl. Transmembrane transporter activity, and Regulation of nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7184_Mixed,_incl._Transmembrane_transporter_activity,_and_Regulation_of_nitrogen_utilization


id: CL:7185
description: Transmembrane transporter activity, and Regulation of nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7185_Transmembrane_transporter_activity,_and_Regulation_of_nitrogen_utilization


id: CL:7186
description: Transmembrane transporter activity, and Regulation of nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7186_Transmembrane_transporter_activity,_and_Regulation_of_nitrogen_utilization


id: CL:7187
description: Transmembrane transporter activity, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7187_Transmembrane_transporter_activity,_and_Metal-sensitive_transcriptional_repressor


id: CL:7188
description: Transmembrane transporter activity, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7188_Transmembrane_transporter_activity,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:7189
description: Mixed, incl. HlyD family secretion protein, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7189_Mixed,_incl._HlyD_family_secretion_protein,_and_AcrB/AcrD/AcrF_family


id: CL:7190
description: Mixed, incl. HlyD family secretion protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7190_Mixed,_incl._HlyD_family_secretion_protein,_and_MMPL_family


id: CL:7191
description: Mixed, incl. HlyD family secretion protein, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7191_Mixed,_incl._HlyD_family_secretion_protein,_and_AcrB/AcrD/AcrF_family


id: CL:7192
description: Mixed, incl. HlyD family secretion protein, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7192_Mixed,_incl._HlyD_family_secretion_protein,_and_AcrB/AcrD/AcrF_family


id: CL:7193
description: Mixed, incl. HlyD family secretion protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7193_Mixed,_incl._HlyD_family_secretion_protein,_and_MMPL_family


id: CL:7194
description: Mixed, incl. HlyD family secretion protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7194_Mixed,_incl._HlyD_family_secretion_protein,_and_MMPL_family


id: CL:7195
description: Mixed, incl. Biotin-lipoyl like, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7195_Mixed,_incl._Biotin-lipoyl_like,_and_MMPL_family


id: CL:7197
description: Mixed, incl. Biotin-lipoyl like, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7197_Mixed,_incl._Biotin-lipoyl_like,_and_MMPL_family


id: CL:7199
description: Mixed, incl. Biotin-lipoyl like, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7199_Mixed,_incl._Biotin-lipoyl_like,_and_MMPL_family


id: CL:7200
description: Mixed, incl. MMPL family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7200_Mixed,_incl._MMPL_family,_and_Biotin-lipoyl_like


id: CL:7202
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7202_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion,_and_MMPL_family


id: CL:7221
description: Mixed, incl. Outer membrane efflux protein, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7221_Mixed,_incl._Outer_membrane_efflux_protein,_and_AcrB/AcrD/AcrF_family


id: CL:7234
description: Outer membrane efflux protein, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7234_Outer_membrane_efflux_protein,_and_ABC_transporter_transmembrane_region


id: CL:7268
description: Mixed, incl. AcrB/AcrD/AcrF family, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7268_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_HlyD_family_secretion_protein


id: CL:7270
description: AcrB/AcrD/AcrF family, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7270_AcrB/AcrD/AcrF_family,_and_HlyD_family_secretion_protein


id: CL:7289
description: Metal-sensitive transcriptional repressor, and Dimerisation domain of Zinc Transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7289_Metal-sensitive_transcriptional_repressor,_and_Dimerisation_domain_of_Zinc_Transporter


id: CL:7299
description: Mixed, incl. Flavin reductase like domain, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7299_Mixed,_incl._Flavin_reductase_like_domain,_and_Cupin_domain


id: CL:7311
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7311_Mixed,_incl._Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mixed, incl. Barrel-sandwich domain of CusB or HlyD membrane-fusion, and Helix_turn_helix multiple antibiotic resistance protein


id: CL:7320
description: Mixed, incl. YtkA-like, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7320_Mixed,_incl._YtkA-like,_and_Sigma-70,_region_4


id: CL:7333
description: Mixed, incl. Aspartyl protease, and Helix_turn_helix, mercury resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7333_Mixed,_incl._Aspartyl_protease,_and_Helix_turn_helix,_mercury_resistance


id: CL:7335
description: Mixed, incl. Outer membrane efflux protein, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7335_Mixed,_incl._Outer_membrane_efflux_protein,_and_AcrB/AcrD/AcrF_family


id: CL:7352
description: Mostly uncharacterized, incl. MgtC family, and OpgC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7352_Mostly_uncharacterized,_incl._MgtC_family,_and_OpgC_protein


id: CL:7355
description: Mixed, incl. Regulation of nitrogen utilization, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7355_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_AcrB/AcrD/AcrF_family


id: CL:7377
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7377_Mixed,_incl._Metal-sensitive_transcriptional_repressor,_and_Cytochrome_C_biogenesis_protein_transmembrane_region

description:
  Mixed, incl. Metal-sensitive transcriptional repressor, and Cytochrome C biogenesis protein transmembrane region


id: CL:7390
description: Mixed, incl. Regulation of nitrogen utilization, and Ammonia transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7390_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Ammonia_transport


id: CL:7391
description: Mostly uncharacterized, incl. Sodium/calcium exchanger protein, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7391_Mostly_uncharacterized,_incl._Sodium/calcium_exchanger_protein,_and_MgtC_family


id: CL:7393
description: Mixed, incl. Outer membrane efflux protein, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7393_Mixed,_incl._Outer_membrane_efflux_protein,_and_AcrB/AcrD/AcrF_family


id: CL:7403
description: Mixed, incl. Sodium/calcium exchanger protein, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7403_Mixed,_incl._Sodium/calcium_exchanger_protein,_and_MgtC_family


id: CL:7413
description: Ammonia transport, and Nitrogen regulatory protein P-II
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7413_Ammonia_transport,_and_Nitrogen_regulatory_protein_P-II


id: CL:7425
description: Mostly uncharacterized, incl. Sulfatase, and META domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7425_Mostly_uncharacterized,_incl._Sulfatase,_and_META_domain


id: CL:7427
description: Mixed, incl. Sulfatase, and Sulfatase-modifying factor enzyme 1
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7427_Mixed,_incl._Sulfatase,_and_Sulfatase-modifying_factor_enzyme_1


id: CL:7439
description: Mixed, incl. META domain, and Suppression of phagosomal maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7439_Mixed,_incl._META_domain,_and_Suppression_of_phagosomal_maturation


id: CL:7453
description: Mixed, incl. Type I protein secretion system complex, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7453_Mixed,_incl._Type_I_protein_secretion_system_complex,_and_Biotin-lipoyl_like


id: CL:7456
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7456_Mixed,_incl._Type_I_protein_secretion_system_complex,_and_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion

description:
  Mixed, incl. Type I protein secretion system complex, and Barrel-sandwich domain of CusB or HlyD membrane-fusion


id: CL:7482
description: Mixed, incl. Sugar (and other) transporter, and Nitrotoluene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7482_Mixed,_incl._Sugar_(and_other)_transporter,_and_Nitrotoluene_metabolic_process


id: CL:7484
description: Mixed, incl. Sugar (and other) transporter, and Cysteine-rich secretory protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7484_Mixed,_incl._Sugar_(and_other)_transporter,_and_Cysteine-rich_secretory_protein_family


id: CL:7501
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7501_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_Negative_regulation_of_growth

description:
  Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and Negative regulation of growth


id: CL:7515
description: Mixed, incl. Queuosine metabolic process, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7515_Mixed,_incl._Queuosine_metabolic_process,_and_Copper_ion_binding


id: CL:7517
description: Mixed, incl. Copper ion binding, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7517_Mixed,_incl._Copper_ion_binding,_and_TAT_protein_transport_complex


id: CL:7518
description: Mixed, incl. Copper ion binding, and Copper binding periplasmic protein CusF
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7518_Mixed,_incl._Copper_ion_binding,_and_Copper_binding_periplasmic_protein_CusF


id: CL:7520
description: Mixed, incl. Copper ion binding, and Copper binding periplasmic protein CusF
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7520_Mixed,_incl._Copper_ion_binding,_and_Copper_binding_periplasmic_protein_CusF


id: CL:7523
description: Copper binding periplasmic protein CusF, and Copper binding proteins, plastocyanin/azurin family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7523_Copper_binding_periplasmic_protein_CusF,_and_Copper_binding_proteins,_plastocyanin/azurin_family


id: CL:7535
description: Mixed, incl. Copper binding proteins, plastocyanin/azurin family, and Multicopper oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7535_Mixed,_incl._Copper_binding_proteins,_plastocyanin/azurin_family,_and_Multicopper_oxidase


id: CL:7558
description: TAT protein transport complex, and Multicopper oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7558_TAT_protein_transport_complex,_and_Multicopper_oxidase


id: CL:757
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:757_Selenocompound_metabolism,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Selenocompound metabolism, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:758
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:758_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Glutathione_peroxidase

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Glutathione peroxidase


id: CL:7582
description: Queuosine metabolic process, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7582_Queuosine_metabolic_process,_and_TatD_related_DNase


id: CL:759
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:759_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Disulphide_bond_corrector_protein_DsbC

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Disulphide bond corrector protein DsbC


id: CL:7611
description: Mixed, incl. Sulfuric ester hydrolase activity, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7611_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_Flavin_reductase_like_domain


id: CL:7625
description: Mostly uncharacterized, incl. PmbA/TldA metallopeptidase domain 1, and Antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7625_Mostly_uncharacterized,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Antioxidant


id: CL:7626
description: Mostly uncharacterized, incl. MgtE intracellular N domain, and Transglycosylase associated protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7626_Mostly_uncharacterized,_incl._MgtE_intracellular_N_domain,_and_Transglycosylase_associated_protein


id: CL:7628
description: Mixed, incl. MgtE intracellular N domain, and Antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7628_Mixed,_incl._MgtE_intracellular_N_domain,_and_Antioxidant


id: CL:7642
description: Mixed, incl. Transglycosylase associated protein, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7642_Mixed,_incl._Transglycosylase_associated_protein,_and_Transposase_activity


id: CL:7653
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7653_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_MgtC_family


id: CL:7655
description: Mixed, incl. MgtC family, and Prolyl oligopeptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7655_Mixed,_incl._MgtC_family,_and_Prolyl_oligopeptidase_family


id: CL:7669
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7669_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Serine_aminopeptidase,_S33


id: CL:7680
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7680_Mixed,_incl._LysR_substrate_binding_domain,_and_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  Mixed, incl. LysR substrate binding domain, and This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:7681
description: Mixed, incl. LysR substrate binding domain, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7681_Mixed,_incl._LysR_substrate_binding_domain,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:7682
description: LysR substrate binding domain, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7682_LysR_substrate_binding_domain,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:7684
description: LysR substrate binding domain, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7684_LysR_substrate_binding_domain,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:7686
description: LysR substrate binding domain, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7686_LysR_substrate_binding_domain,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:7693
description: Bacterial regulatory helix-turn-helix protein, lysR family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7693_Bacterial_regulatory_helix-turn-helix_protein,_lysR_family


id: CL:770
description: Glutathione peroxidase, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:770_Glutathione_peroxidase,_and_AhpC/TSA_family


id: CL:7744
description: Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7744_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:7756
description: Mixed, incl. CoA-transferase family III, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7756_Mixed,_incl._CoA-transferase_family_III,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:7772
description: Mixed, incl. Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7772_Mixed,_incl._Cation_efflux_family


id: CL:7785
description: Mixed, incl. Salmonella infection, and AraC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7785_Mixed,_incl._Salmonella_infection,_and_AraC-like_ligand_binding_domain


id: CL:7786
description: Mixed, incl. Salmonella infection, and Protein of unknown function (DUF3551)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7786_Mixed,_incl._Salmonella_infection,_and_Protein_of_unknown_function_(DUF3551)


id: CL:779
description: ferredoxin-NADP+ reductase activity, and Protein-disulfide reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:779_ferredoxin-NADP+_reductase_activity,_and_Protein-disulfide_reductase_activity


id: CL:7795
description: Mixed, incl. AraC-like ligand binding domain, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7795_Mixed,_incl._AraC-like_ligand_binding_domain,_and_Lipid_oxidation


id: CL:7805
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7805_Mixed,_incl._This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...,_and_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component

description:
  Mixed, incl. This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ..., and Tripartite ATP-independent periplasmic transporter, DctM component


id: CL:7806
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7806_Mixed,_incl._Tripartite_ATP-independent_periplasmic_transporter,_DctM_component,_and_Bacterial_extracellular_solute-binding_protein,_family_7

description:
  Mixed, incl. Tripartite ATP-independent periplasmic transporter, DctM component, and Bacterial extracellular solute-binding protein, family 7


id: CL:7808
description: Bacterial extracellular solute-binding protein, family 7, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7808_Bacterial_extracellular_solute-binding_protein,_family_7,_and_C4-dicarboxylate_transport


id: CL:7809
description: Tripartite ATP-independent periplasmic transporter complex, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7809_Tripartite_ATP-independent_periplasmic_transporter_complex,_and_C4-dicarboxylate_transport


id: CL:7822
description: C4-dicarboxylate transport, and Bacterial extracellular solute-binding protein, family 7
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7822_C4-dicarboxylate_transport,_and_Bacterial_extracellular_solute-binding_protein,_family_7


id: CL:7838
description: Mixed, incl. Tripartite ATP-independent periplasmic transporter, DctM component, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7838_Mixed,_incl._Tripartite_ATP-independent_periplasmic_transporter,_DctM_component,_and_NMT1/THI5_like


id: CL:7840
description: Tripartite ATP-independent periplasmic transporter, DctM component, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7840_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component,_and_NMT1/THI5_like


id: CL:7861
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7861_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...,_and_Fatty_acid_hydroxylase

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ..., and Fatty acid hydroxylase


id: CL:7862
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7862_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:7864
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7864_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:7881
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7881_Mixed,_incl._Fatty_acid_hydroxylase,_and_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  Mixed, incl. Fatty acid hydroxylase, and This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:7892
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7892_Mostly_uncharacterized,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Bacterial_regulatory_proteins,_tetR_family

description:
  Mostly uncharacterized, incl. Activator of Hsp90 ATPase homolog 1-like protein, and Bacterial regulatory proteins, tetR family


id: CL:7893
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7893_Mostly_uncharacterized,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Thiazole_synthase_activity

description:
  Mostly uncharacterized, incl. Activator of Hsp90 ATPase homolog 1-like protein, and Thiazole synthase activity


id: CL:7894
description: Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and Thiazole synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7894_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Thiazole_synthase_activity


id: CL:7896
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7896_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:7897
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7897_Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Activator of Hsp90 ATPase homolog 1-like protein, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:7898
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7898_Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Activator of Hsp90 ATPase homolog 1-like protein, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:7900
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7900_Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Activator of Hsp90 ATPase homolog 1-like protein, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:7919
description: Activator of Hsp90 ATPase homolog 1-like protein, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7919_Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_LysE_type_translocator


id: CL:792
description: Mixed, incl. DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:792_Mixed,_incl._DNA_repair,_and_DNA_replication


id: CL:7928
description: Mixed, incl. L-methylmalonyl-CoA metabolic process, and Thiazole synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7928_Mixed,_incl._L-methylmalonyl-CoA_metabolic_process,_and_Thiazole_synthase_activity


id: CL:7929
description: Mixed, incl. Thiazole synthase activity, and L-methylmalonyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7929_Mixed,_incl._Thiazole_synthase_activity,_and_L-methylmalonyl-CoA_metabolic_process


id: CL:7945
description: Mixed, incl. Ubiquinone binding, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7945_Mixed,_incl._Ubiquinone_binding,_and_FAD_dependent_oxidoreductase


id: CL:796
description: DNA repair, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:796_DNA_repair,_and_Pfam_phage_integrase_family


id: CL:7960
description: Mixed, incl. Antibiotic metabolic process, and Thiazole synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7960_Mixed,_incl._Antibiotic_metabolic_process,_and_Thiazole_synthase_activity


id: CL:7961
description: Mixed, incl. Antibiotic resistance, and Thiazole synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7961_Mixed,_incl._Antibiotic_resistance,_and_Thiazole_synthase_activity


id: CL:797
description: Mixed, incl. DNA ligase (ATP) activity, and Base excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:797_Mixed,_incl._DNA_ligase_(ATP)_activity,_and_Base_excision_repair


id: CL:7972
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7972_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:798
description: Mixed, incl. Mismatch repair, and DNA ligase (ATP) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:798_Mixed,_incl._Mismatch_repair,_and_DNA_ligase_(ATP)_activity


id: CL:7983
description: Mostly uncharacterized, incl. tRNA-specific adenosine deaminase activity, and BA14K-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7983_Mostly_uncharacterized,_incl._tRNA-specific_adenosine_deaminase_activity,_and_BA14K-like_protein


id: CL:7984
description: Mixed, incl. BA14K-like protein, and 6-aminohexanoate-dimer hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7984_Mixed,_incl._BA14K-like_protein,_and_6-aminohexanoate-dimer_hydrolase_activity


id: CL:7995
description: Mixed, incl. tRNA-specific adenosine deaminase activity, and Protein deacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:7995_Mixed,_incl._tRNA-specific_adenosine_deaminase_activity,_and_Protein_deacylation


id: CL:800
description: Mismatch repair, and 3-5 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:800_Mismatch_repair,_and_3-5_exonuclease


id: CL:8004
description: Mixed, incl. Bacterial regulatory proteins, tetR family, and Terpene catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8004_Mixed,_incl._Bacterial_regulatory_proteins,_tetR_family,_and_Terpene_catabolic_process


id: CL:8006
description: Terpene catabolic process, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8006_Terpene_catabolic_process,_and_Bacterial_nucleoid


id: CL:8023
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8023_Mixed,_incl._Tetracyclin_repressor-like,_C-terminal_domain,_and_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain

description:
  Mixed, incl. Tetracyclin repressor-like, C-terminal domain, and 6-O-methylguanine DNA methyltransferase, DNA binding domain


id: CL:8036
description: Mostly uncharacterized, incl. Sigma factor, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8036_Mostly_uncharacterized,_incl._Sigma_factor,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:8037
description: Mixed, incl. Sigma factor, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8037_Mixed,_incl._Sigma_factor,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:8038
description: Mixed, incl. Sigma factor, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8038_Mixed,_incl._Sigma_factor,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:8039
description: Mixed, incl. Sigma-70, region 4, and Caspase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8039_Mixed,_incl._Sigma-70,_region_4,_and_Caspase_domain


id: CL:8040
description: Mixed, incl. Sigma-70, region 4, and DoxX
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8040_Mixed,_incl._Sigma-70,_region_4,_and_DoxX


id: CL:8042
description: Mixed, incl. DoxX, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8042_Mixed,_incl._DoxX,_and_Sigma-70,_region_4


id: CL:8065
description: Mixed, incl. Caspase domain, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8065_Mixed,_incl._Caspase_domain,_and_MatE


id: CL:8078
description: Mixed, incl. Sigma factor, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8078_Mixed,_incl._Sigma_factor,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:8079
description: Mixed, incl. Sigma factor, and Alkane catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8079_Mixed,_incl._Sigma_factor,_and_Alkane_catabolic_process


id: CL:8081
description: Alkane catabolic process, and Sigma-70 region 2
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8081_Alkane_catabolic_process,_and_Sigma-70_region_2


id: CL:8102
description: Mixed, incl. Sigma factor, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8102_Mixed,_incl._Sigma_factor,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:8115
description: Mixed, incl. Caspase domain, and Uncharacterized protein family, UPF0114
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8115_Mixed,_incl._Caspase_domain,_and_Uncharacterized_protein_family,_UPF0114


id: CL:8124
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8124_Mostly_uncharacterized,_incl._Transglutaminase-like_superfamily,_and_S-ribosylhomocysteine_lyase_activity

description:
  Mostly uncharacterized, incl. Transglutaminase-like superfamily, and S-ribosylhomocysteine lyase activity


id: CL:8125
description: Mostly uncharacterized, incl. Transglutaminase-like superfamily, and DJ-1/PfpI family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8125_Mostly_uncharacterized,_incl._Transglutaminase-like_superfamily,_and_DJ-1/PfpI_family


id: CL:8126
description: Mostly uncharacterized, incl. Transglutaminase-like superfamily, and DJ-1/PfpI family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8126_Mostly_uncharacterized,_incl._Transglutaminase-like_superfamily,_and_DJ-1/PfpI_family


id: CL:8127
description: Mostly uncharacterized, incl. Pfam phage integrase family, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8127_Mostly_uncharacterized,_incl._Pfam_phage_integrase_family,_and_Acetyltransferase_(GNAT)_domain


id: CL:8129
description: Mixed, incl. Pfam phage integrase family, and Negative regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8129_Mixed,_incl._Pfam_phage_integrase_family,_and_Negative_regulation_of_molecular_function


id: CL:8148
description: Mixed, incl. Transglutaminase-like superfamily, and DJ-1/PfpI family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8148_Mixed,_incl._Transglutaminase-like_superfamily,_and_DJ-1/PfpI_family


id: CL:8169
description: Mixed, incl. S-ribosylhomocysteine lyase activity, and Protein of unknown function (DUF1236)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8169_Mixed,_incl._S-ribosylhomocysteine_lyase_activity,_and_Protein_of_unknown_function_(DUF1236)


id: CL:8185
description: Mostly uncharacterized, incl. TPM domain, and LemA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8185_Mostly_uncharacterized,_incl._TPM_domain,_and_LemA_family


id: CL:8187
description: Mixed, incl. TPM domain, and LemA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8187_Mixed,_incl._TPM_domain,_and_LemA_family


id: CL:8189
description: Peptidase family M48, and LemA family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8189_Peptidase_family_M48,_and_LemA_family


id: CL:819
description: Non-homologous end-joining, and Exodeoxyribonuclease III activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:819_Non-homologous_end-joining,_and_Exodeoxyribonuclease_III_activity


id: CL:8213
description: Mostly uncharacterized, incl. Protein adenylylation, and PepSY-associated TM region
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8213_Mostly_uncharacterized,_incl._Protein_adenylylation,_and_PepSY-associated_TM_region


id: CL:8215
description: Mixed, incl. PepSY-associated TM region, and SbmA/BacA-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8215_Mixed,_incl._PepSY-associated_TM_region,_and_SbmA/BacA-like_family


id: CL:8231
description: Mixed, incl. DNA geometric change, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8231_Mixed,_incl._DNA_geometric_change,_and_Efflux_transmembrane_transporter_activity


id: CL:8240
description: Mostly uncharacterized, incl. protein-DNA covalent cross-linking, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8240_Mostly_uncharacterized,_incl._protein-DNA_covalent_cross-linking,_and_Regulation_of_cell_cycle


id: CL:8242
description: Mixed, incl. protein-DNA covalent cross-linking, and Hydroxyacylglutathione hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8242_Mixed,_incl._protein-DNA_covalent_cross-linking,_and_Hydroxyacylglutathione_hydrolase_activity


id: CL:8243
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8243_Mixed,_incl._Hydroxyacylglutathione_hydrolase_activity,_and_SOS_response_associated_peptidase_(SRAP)

description:
  Mixed, incl. Hydroxyacylglutathione hydrolase activity, and SOS response associated peptidase (SRAP)


id: CL:8254
description: Mixed, incl. AMP metabolic process, and Double-strand break repair via nonhomologous end joining
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8254_Mixed,_incl._AMP_metabolic_process,_and_Double-strand_break_repair_via_nonhomologous_end_joining


id: CL:8273
description: Mixed, incl. Regulation of cell cycle, and Dihydrouridine synthase (Dus)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8273_Mixed,_incl._Regulation_of_cell_cycle,_and_Dihydrouridine_synthase_(Dus)


id: CL:8274
description: Mixed, incl. Regulation of cell cycle, and Dihydrouridine synthase (Dus)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8274_Mixed,_incl._Regulation_of_cell_cycle,_and_Dihydrouridine_synthase_(Dus)


id: CL:8276
description: Regulation of cell cycle, and Signal peptidase, peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8276_Regulation_of_cell_cycle,_and_Signal_peptidase,_peptidase_S26


id: CL:8293
description: Mixed, incl. PilZ domain, and Ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8293_Mixed,_incl._PilZ_domain,_and_Ribonuclease_activity


id: CL:8303
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8303_Mostly_uncharacterized,_incl._Starch_and_sucrose_metabolism,_and_Positive_regulation_of_biological_process

description:
  Mostly uncharacterized, incl. Starch and sucrose metabolism, and Positive regulation of biological process


id: CL:8304
description: Mostly uncharacterized, incl. Starch and sucrose metabolism, and BA14K-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8304_Mostly_uncharacterized,_incl._Starch_and_sucrose_metabolism,_and_BA14K-like_protein


id: CL:8305
description: Mixed, incl. Starch and sucrose metabolism, and BA14K-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8305_Mixed,_incl._Starch_and_sucrose_metabolism,_and_BA14K-like_protein


id: CL:8307
description: Mixed, incl. Trehalose metabolic process, and Glycosyl hydrolases family 15
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8307_Mixed,_incl._Trehalose_metabolic_process,_and_Glycosyl_hydrolases_family_15


id: CL:8308
description: Mixed, incl. Trehalose metabolic process, and Glycosyl hydrolases family 15
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8308_Mixed,_incl._Trehalose_metabolic_process,_and_Glycosyl_hydrolases_family_15


id: CL:8310
description: Trehalose metabolic process, and Glycosyl hydrolases family 15
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8310_Trehalose_metabolic_process,_and_Glycosyl_hydrolases_family_15


id: CL:8331
description: Mixed, incl. DinB superfamily, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8331_Mixed,_incl._DinB_superfamily,_and_Sugar_transport


id: CL:834
description: SOS response, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:834_SOS_response,_and_Nucleotide_excision_repair


id: CL:8345
description: Mixed, incl. protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8345_Mixed,_incl._protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: CL:8354
description: Mixed, incl. Protein acylation, and GIY-YIG catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8354_Mixed,_incl._Protein_acylation,_and_GIY-YIG_catalytic_domain


id: CL:8355
description: Mixed, incl. Protein acylation, and GIY-YIG catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8355_Mixed,_incl._Protein_acylation,_and_GIY-YIG_catalytic_domain


id: CL:8370
description: Mixed, incl. Histidine kinase-like ATPases
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8370_Mixed,_incl._Histidine_kinase-like_ATPases


id: CL:8379
description: Mixed, incl. Positive regulation of biological process, and Endonuclease III
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8379_Mixed,_incl._Positive_regulation_of_biological_process,_and_Endonuclease_III


id: CL:838
description: Endodeoxyribonuclease activity, and Four-way junction helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:838_Endodeoxyribonuclease_activity,_and_Four-way_junction_helicase_activity


id: CL:8381
description: Mixed, incl. Endonuclease III, and Mechanosensitive ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8381_Mixed,_incl._Endonuclease_III,_and_Mechanosensitive_ion_channel


id: CL:8400
description: Mostly uncharacterized, incl. Beta-lactamase, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8400_Mostly_uncharacterized,_incl._Beta-lactamase,_and_Transglycosylase_SLT_domain


id: CL:8401
description: Mixed, incl. Beta-lactamase, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8401_Mixed,_incl._Beta-lactamase,_and_Endonuclease


id: CL:8402
description: Mixed, incl. Beta-lactamase, and Beta-lactamase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8402_Mixed,_incl._Beta-lactamase,_and_Beta-lactamase_enzyme_family


id: CL:8405
description: Beta-lactamase enzyme family, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8405_Beta-lactamase_enzyme_family,_and_Beta-lactamase


id: CL:8422
description: Mixed, incl. 6-aminohexanoate-dimer hydrolase activity, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8422_Mixed,_incl._6-aminohexanoate-dimer_hydrolase_activity,_and_SnoaL-like_domain


id: CL:8431
description: Mixed, incl. GIY-YIG catalytic domain, and GIY-YIG type nucleases (URI domain)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8431_Mixed,_incl._GIY-YIG_catalytic_domain,_and_GIY-YIG_type_nucleases_(URI_domain)


id: CL:8433
description: Mixed, incl. Host cell, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8433_Mixed,_incl._Host_cell,_and_Cell_outer_membrane


id: CL:8449
description: Mixed, incl. GIY-YIG catalytic domain, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8449_Mixed,_incl._GIY-YIG_catalytic_domain,_and_Spermidine_synthase_activity


id: CL:8458
description: Mixed, incl. Transglycosylase SLT domain, and Uncharacterized protein family, UPF0114
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8458_Mixed,_incl._Transglycosylase_SLT_domain,_and_Uncharacterized_protein_family,_UPF0114


id: CL:8459
description: Mixed, incl. Transglycosylase SLT domain, and Uncharacterized protein family, UPF0114
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8459_Mixed,_incl._Transglycosylase_SLT_domain,_and_Uncharacterized_protein_family,_UPF0114


id: CL:8460
description: Mixed, incl. Transglycosylase SLT domain, and Uncharacterized protein family, UPF0114
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8460_Mixed,_incl._Transglycosylase_SLT_domain,_and_Uncharacterized_protein_family,_UPF0114


id: CL:8462
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8462_Mixed,_incl._Uncharacterized_protein_family,_UPF0114,_and_Negative_regulation_of_translational_elongation

description:
  Mixed, incl. Uncharacterized protein family, UPF0114, and Negative regulation of translational elongation


id: CL:8479
description: Mixed, incl. IrrE N-terminal-like domain, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8479_Mixed,_incl._IrrE_N-terminal-like_domain,_and_Transglycosylase_SLT_domain


id: CL:8489
description: Mixed, incl. DNA replication, synthesis of RNA primer, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8489_Mixed,_incl._DNA_replication,_synthesis_of_RNA_primer,_and_Pfam_phage_integrase_family


id: CL:8503
description: Mixed, incl. Secretion by the type IV secretion system, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8503_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_DNA_binding


id: CL:8504
description: Mixed, incl. Secretion by the type IV secretion system, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8504_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Coiled_coil


id: CL:8505
description: Mixed, incl. Secretion by the type IV secretion system, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8505_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Coiled_coil


id: CL:8507
description: Mixed, incl. Secretion by the type IV secretion system, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8507_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Cell_outer_membrane


id: CL:8508
description: Mixed, incl. Secretion by the type IV secretion system, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8508_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Coiled_coil


id: CL:8509
description: Mixed, incl. Secretion by the type IV secretion system, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8509_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Cell_outer_membrane


id: CL:8511
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8511_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:8512
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8512_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:8513
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8513_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:8516
description: Mixed, incl. Protein secretion by the type IV secretion system, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8516_Mixed,_incl._Protein_secretion_by_the_type_IV_secretion_system,_and_Protein_transmembrane_transport


id: CL:8535
description: Mixed, incl. Secretion by the type IV secretion system, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8535_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Response_to_virus


id: CL:8538
description: Mixed, incl. Response to virus, and Protein secretion by the type IV secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8538_Mixed,_incl._Response_to_virus,_and_Protein_secretion_by_the_type_IV_secretion_system


id: CL:854
description: Mixed, incl. DHHA1 domain, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:854_Mixed,_incl._DHHA1_domain,_and_UvrD-like_helicase_C-terminal_domain


id: CL:8556
description: Mixed, incl. Secretion by the type IV secretion system, and TrbC/VIRB2 pilin
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8556_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_TrbC/VIRB2_pilin


id: CL:8559
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8559_Mixed,_incl._Bacterial_conjugation_TrbI-like_protein_,_and_CagE,_TrbE,_VirB_family,_component_of_type_IV_transporter_system

description:
  Mixed, incl. Bacterial conjugation TrbI-like protein , and CagE, TrbE, VirB family, component of type IV transporter system


id: CL:8581
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8581_Mostly_uncharacterized,_incl._Uncharacterized_conserved_protein_(DUF2285),_and_Signal_peptide_processing

description:
  Mostly uncharacterized, incl. Uncharacterized conserved protein (DUF2285), and Signal peptide processing


id: CL:8583
description: Mixed, incl. Signal peptide processing, and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8583_Mixed,_incl._Signal_peptide_processing,_and_Glycosidase


id: CL:8585
description: Mixed, incl. Protein of unknown function (DUF3363), and Uncharacterized conserved protein (DUF2285)
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8585_Mixed,_incl._Protein_of_unknown_function_(DUF3363),_and_Uncharacterized_conserved_protein_(DUF2285)


id: CL:8586
name:
  Local Network Cluster (STRING).STRING_v12.0_883078_STRINGid_CL:8586_Mostly_uncharacterized,_incl._Protein_of_unknown_function_(DUF3363),_and_DNA_replication_origin_binding

description:
  Mostly uncharacterized, incl. Protein of unknown function (DUF3363), and DNA replication origin binding


