# geneInfo

ensembl_gene_id: HMP0721_0027
symbol: pfkB
gene_biotype: protein_coding
description:
  1-phosphofructokinase; COG: COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.


ensembl_gene_id: HMP0721_0053
symbol: mrnC
gene_biotype: protein_coding
description:
  RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: HMP0721_0059
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: HMP0721_0061
symbol: EFV02864.1
gene_biotype: protein_coding
description:
  Transketolase, C-terminal domain protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: HMP0721_0086
symbol: rfbA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HMP0721_0087
symbol: rfbC
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: HMP0721_0088
symbol: rfbB
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; COG: COG1088; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HMP0721_0089
symbol: rfbD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: HMP0721_0112
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HMP0721_0119
symbol: glnA
gene_biotype: protein_coding
description:
  Glutamate--ammonia ligase, catalytic domain protein; COG: COG3968; Belongs to the glutamine synthetase family.


ensembl_gene_id: HMP0721_0128
symbol: EFV02655.1
gene_biotype: protein_coding
description:
  Glutamine synthetase, beta-grasp domain protein; COG: COG0174; Belongs to the glutamine synthetase family.


ensembl_gene_id: HMP0721_0139
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMP0721_0141
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: HMP0721_0142
symbol: phoU
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: HMP0721_0147
symbol: asrC
gene_biotype: protein_coding
description:
  Sulfite reductase, subunit C; COG: COG2221; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: HMP0721_0152
symbol: thi4
gene_biotype: protein_coding
description:
  Thiazole biosynthesis enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur.


ensembl_gene_id: HMP0721_0163
symbol: pdxB
gene_biotype: protein_coding
description:
  4-phosphoerythronate dehydrogenase; COG: COG0111; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMP0721_0190
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: HMP0721_0191
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMP0721_0192
symbol: atpF
gene_biotype: protein_coding
description:
  Putative ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: HMP0721_0194
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: HMP0721_0195
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: HMP0721_0196
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: HMP0721_0197
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMP0721_0203
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: HMP0721_0206
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: HMP0721_0207
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: HMP0721_0225
symbol: dinB
gene_biotype: protein_coding
description:
  ImpB/MucB/SamB family protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: HMP0721_0231
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMP0721_0232
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMP0721_0233
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMP0721_0234
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: HMP0721_0245
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: HMP0721_0252
symbol: EFV02778.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: HMP0721_0257
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMP0721_0258
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: HMP0721_0260
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HMP0721_0273
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMP0721_0275
symbol: glyS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMP0721_0289
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: HMP0721_0290
symbol: recU
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: HMP0721_0291
symbol: EFV02605.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; COG: COG0564; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMP0721_0295
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: HMP0721_0296
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMP0721_0297
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMP0721_0299
symbol: pyc
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: HMP0721_0308
symbol: EFV02622.1
gene_biotype: protein_coding
description:
  Putative TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; COG: COG1249; overlaps another CDS with the same product name.


ensembl_gene_id: HMP0721_0309
symbol: EFV02623.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; COG: COG1249; overlaps another CDS with the same product name.


ensembl_gene_id: HMP0721_0313
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: HMP0721_0322
symbol: EFV02636.1
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate dehydrogenase [NAD(P)+]; COG: COG0240; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: HMP0721_0327
symbol: EFV02641.1
gene_biotype: protein_coding
description:
  Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMP0721_0331
symbol: hppA
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: HMP0721_0332
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMP0721_0337
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: HMP0721_0338
symbol: glgP
gene_biotype: protein_coding
description:
  Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMP0721_0339
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: HMP0721_0343
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; COG: COG2759; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: HMP0721_0345
symbol: folD
gene_biotype: protein_coding
description:
  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMP0721_0369
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: HMP0721_0370
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: HMP0721_0371
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: HMP0721_0375
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: HMP0721_0377
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: HMP0721_0378
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: HMP0721_0380
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; COG: COG0152; Belongs to the SAICAR synthetase family.


ensembl_gene_id: HMP0721_0381
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: HMP0721_0385
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: HMP0721_0399
symbol: EFV02491.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMP0721_0401
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMP0721_0402
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMP0721_0403
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMP0721_0404
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMP0721_0405
symbol: lon-2
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMP0721_0406
symbol: ysxC
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMP0721_0408
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: HMP0721_0409
symbol: secD
gene_biotype: protein_coding
description:
  Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMP0721_0410
symbol: secF
gene_biotype: protein_coding
description:
  Export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMP0721_0412
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HMP0721_0413
symbol: EFV02505.1
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMP0721_0414
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: HMP0721_0418
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMP0721_0429
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: HMP0721_0432
symbol: EFV02524.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMP0721_0433
symbol: sepF
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: HMP0721_0440
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; COG: COG0057; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMP0721_0442
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMP0721_0443
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMP0721_0449
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: HMP0721_0451
symbol: EFV02543.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HMP0721_0452
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMP0721_0455
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HMP0721_0461
symbol: tmcAL
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: HMP0721_0462
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMP0721_0464
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HMP0721_0466
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMP0721_0467
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMP0721_0468
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: HMP0721_0469
symbol: EFV02561.1
gene_biotype: protein_coding
description:
  Helix-turn-helix protein, YlxM/p13 family; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: HMP0721_0470
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: HMP0721_0473
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HMP0721_0474
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMP0721_0475
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMP0721_0477
symbol: ylqF
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: HMP0721_0482
symbol: polA
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: HMP0721_0483
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMP0721_0522
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase OB-fold domain protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: HMP0721_0524
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMP0721_0525
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMP0721_0526
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMP0721_0527
symbol: rph
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: HMP0721_0528
symbol: rdgB
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMP0721_0530
symbol: maf
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: HMP0721_0533
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HMP0721_0535
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: HMP0721_0536
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMP0721_0539
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMP0721_0541
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HMP0721_0542
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMP0721_0544
symbol: glgB-2
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: HMP0721_0549
symbol: EFV02316.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HMP0721_0556
symbol: EFV02323.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: HMP0721_0564
symbol: EFV02331.1
gene_biotype: protein_coding
description:
  Histidinol phosphate phosphatase HisJ family; COG: COG1387; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: HMP0721_0573
symbol: paaK
gene_biotype: protein_coding
description:
  Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: HMP0721_0575
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: HMP0721_0579
symbol: EFV02346.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: HMP0721_0581
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase, beta subunit; COG: COG0072; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HMP0721_0582
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase, alpha subunit; COG: COG0016; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: HMP0721_0583
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMP0721_0585
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMP0721_0586
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: HMP0721_0594
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMP0721_0595
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMP0721_0596
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMP0721_0598
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HMP0721_0600
symbol: cgtA
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMP0721_0603
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMP0721_0608
symbol: metA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: HMP0721_0609
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMP0721_0610
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMP0721_0611
symbol: tsaD
gene_biotype: protein_coding
description:
  Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMP0721_0616
symbol: nrdG
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: HMP0721_0620
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: HMP0721_0623
symbol: iorA
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: HMP0721_0624
symbol: EFV02201.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI family; COG: COG3323; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: HMP0721_0626
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMP0721_0627
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMP0721_0629
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMP0721_0632
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMP0721_0633
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMP0721_0635
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMP0721_0636
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMP0721_0637
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMP0721_0651
symbol: EFV02228.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: HMP0721_0656
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMP0721_0658
symbol: hprK
gene_biotype: protein_coding
description:
  HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: HMP0721_0659
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMP0721_0663
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMP0721_0673
symbol: EFV02250.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMP0721_0674
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HMP0721_0681
symbol: leuA
gene_biotype: protein_coding
description:
  Putative 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: HMP0721_0690
symbol: galE
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; COG: COG1087; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: HMP0721_0712
symbol: EFV02289.1
gene_biotype: protein_coding
description:
  Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; COG: COG1211; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: HMP0721_0722
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HMP0721_0725
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMP0721_0727
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity.


ensembl_gene_id: HMP0721_0728
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: HMP0721_0729
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMP0721_0734
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMP0721_0739
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMP0721_0741
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMP0721_0742
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HMP0721_0745
symbol: uppS
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMP0721_0750
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMP0721_0752
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG: COG0558; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMP0721_0753
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HMP0721_0755
symbol: dut
gene_biotype: protein_coding
description:
  dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HMP0721_0756
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMP0721_0757
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMP0721_0759
symbol: argD
gene_biotype: protein_coding
description:
  Aminotransferase, acetylornithine/succinylornithine family; COG: COG4992; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: HMP0721_0760
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: HMP0721_0761
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: HMP0721_0762
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: HMP0721_0763
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; COG: COG0137; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: HMP0721_0769
symbol: sun
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: HMP0721_0771
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMP0721_0772
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMP0721_0774
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMP0721_0777
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: HMP0721_0782
symbol: EFV02016.1
gene_biotype: protein_coding
description:
  Sodium:neurotransmitter symporter family protein; COG: COG0733; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: HMP0721_0785
symbol: EFV02019.1
gene_biotype: protein_coding
description:
  Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; COG: COG0334; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: HMP0721_0788
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMP0721_0789
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: HMP0721_0792
symbol: EFV02026.1
gene_biotype: protein_coding
description:
  Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: HMP0721_0793
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: HMP0721_0794
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMP0721_0806
symbol: rex
gene_biotype: protein_coding
description:
  CoA binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: HMP0721_0809
symbol: EFV02043.1
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HMP0721_0811
symbol: atpD-2
gene_biotype: protein_coding
description:
  V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMP0721_0812
symbol: atpB-2
gene_biotype: protein_coding
description:
  ATP synthase ab domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: HMP0721_0813
symbol: atpA-2
gene_biotype: protein_coding
description:
  ATP synthase ab domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: HMP0721_0822
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HMP0721_0831
symbol: putP
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: HMP0721_0832
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMP0721_0836
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: HMP0721_0838
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: HMP0721_0839
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMP0721_0840
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMP0721_0841
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: HMP0721_0842
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: HMP0721_0843
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: HMP0721_0849
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMP0721_0850
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: HMP0721_0851
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMP0721_0852
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: HMP0721_0853
symbol: nnrE
gene_biotype: protein_coding
description:
  YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: HMP0721_0865
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: HMP0721_0876
symbol: EFV02110.1
gene_biotype: protein_coding
description:
  Putative bacitracin synthetase 1; COG: COG1020; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: HMP0721_0881
symbol: EFV02115.1
gene_biotype: protein_coding
description:
  Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: HMP0721_0884
symbol: dltC
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.


ensembl_gene_id: HMP0721_0885
symbol: EFV02119.1
gene_biotype: protein_coding
description:
  MBOAT family protein; Could be involved in the transport of activated D-alanine through the membrane.


ensembl_gene_id: HMP0721_0886
symbol: EFV02120.1
gene_biotype: protein_coding
description:
  Putative D-alanine--poly(phosphoribitol) ligase, subunit 1; COG: COG1020; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: HMP0721_0893
symbol: EFV02127.1
gene_biotype: protein_coding
description:
  6-O-methylguanine DNA methyltransferase, DNA binding domain protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: HMP0721_0894
symbol: EFV02128.1
gene_biotype: protein_coding
description:
  Base excision DNA repair protein, HhH-GPD family; COG: COG0122; overlaps another CDS with the same product name.


ensembl_gene_id: HMP0721_0938
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; COG: COG2265; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMP0721_0941
symbol: cobS
gene_biotype: protein_coding
description:
  adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: HMP0721_0955
symbol: EFV01562.1
gene_biotype: protein_coding
description:
  Ribulose bisphosphate carboxylase large chain, catalytic domain protein; COG: COG1850; Belongs to the RuBisCO large chain family.


ensembl_gene_id: HMP0721_0988
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: HMP0721_0990
symbol: rlmH
gene_biotype: protein_coding
description:
  Putative rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HMP0721_0994
symbol: EFV01601.1
gene_biotype: protein_coding
description:
  Putative 3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: HMP0721_1006
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: HMP0721_1008
symbol: nadC
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide diphosphorylase (carboxylating); COG: COG0157; Belongs to the NadC/ModD family.


ensembl_gene_id: HMP0721_1012
symbol: mltG
gene_biotype: protein_coding
description:
  YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: HMP0721_1014
symbol: rnj
gene_biotype: protein_coding
description:
  Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: HMP0721_1018
symbol: EFV01625.1
gene_biotype: protein_coding
description:
  RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HMP0721_1020
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMP0721_1025
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMP0721_1031
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: HMP0721_1032
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: HMP0721_1033
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: HMP0721_1034
symbol: EFV01641.1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase/homocitrate synthase family protein; COG: COG0119; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: HMP0721_1035
symbol: tadA
gene_biotype: protein_coding
description:
  Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMP0721_1038
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: HMP0721_1041
symbol: coaBC
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: HMP0721_1044
symbol: EFV01651.1
gene_biotype: protein_coding
description:
  Putative amidophosphoribosyltransferase; COG: COG0034; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMP0721_1045
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HMP0721_1051
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMP0721_1052
symbol: scpA
gene_biotype: protein_coding
description:
  ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMP0721_1054
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HMP0721_1056
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: HMP0721_1057
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMP0721_1059
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMP0721_1061
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HMP0721_1062
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: HMP0721_1063
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMP0721_1066
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMP0721_1068
symbol: hslO
gene_biotype: protein_coding
description:
  Chaperonin HslO; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: HMP0721_1078
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: HMP0721_1085
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: HMP0721_1097
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMP0721_1100
symbol: nadK
gene_biotype: protein_coding
description:
  NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMP0721_1104
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMP0721_1105
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMP0721_1106
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: HMP0721_1109
symbol: raiA
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: HMP0721_1112
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMP0721_1113
symbol: EFV01720.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase family protein; COG: COG0617; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: HMP0721_1115
symbol: hisZ
gene_biotype: protein_coding
description:
  tRNA ligase class II core domain (G, H, P, S and T); Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: HMP0721_1116
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: HMP0721_1117
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: HMP0721_1118
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; COG: COG0079; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: HMP0721_1120
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: HMP0721_1121
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; COG: COG0106.


ensembl_gene_id: HMP0721_1122
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: HMP0721_1123
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP diphosphatase; COG: COG0139; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: HMP0721_1144
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: HMP0721_1146
symbol: EFV01753.1
gene_biotype: protein_coding
description:
  TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMP0721_1147
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: HMP0721_1149
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMP0721_1150
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; COG: COG0634; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMP0721_1151
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HMP0721_1155
symbol: hup
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: HMP0721_1159
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMP0721_1160
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMP0721_1161
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: HMP0721_1162
symbol: EFV01769.1
gene_biotype: protein_coding
description:
  Putative UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; COG: COG1207.


ensembl_gene_id: HMP0721_1173
symbol: mtnA
gene_biotype: protein_coding
description:
  S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: HMP0721_1174
symbol: EFV01781.1
gene_biotype: protein_coding
description:
  Putative methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.


ensembl_gene_id: HMP0721_1185
symbol: cysK
gene_biotype: protein_coding
description:
  Cysteine synthase A; COG: COG0031; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: HMP0721_1189
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; COG: COG0015; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: HMP0721_1193
symbol: rny
gene_biotype: protein_coding
description:
  YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: HMP0721_1201
symbol: msrB
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMP0721_1234
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: HMP0721_1236
symbol: cobB-2
gene_biotype: protein_coding
description:
  Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: HMP0721_1278
symbol: dut-2
gene_biotype: protein_coding
description:
  dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: HMP0721_1295
symbol: EFV01901.1
gene_biotype: protein_coding
description:
  Site-specific recombinase, phage integrase family; COG: COG0582; Belongs to the 'phage' integrase family.


ensembl_gene_id: HMP0721_1307
symbol: cas2-2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMP0721_1308
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMP0721_1321
symbol: fsa
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: HMP0721_1326
symbol: EFV01931.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; COG: COG0566; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMP0721_1330
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMP0721_1332
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: HMP0721_1334
symbol: EFV01939.1
gene_biotype: protein_coding
description:
  Putative uracil-DNA glycosylase; COG: COG0692; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.


ensembl_gene_id: HMP0721_1432
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: HMP0721_1438
symbol: trmU
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMP0721_1443
symbol: thiE
gene_biotype: protein_coding
description:
  Putative thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: HMP0721_1445
symbol: thiM
gene_biotype: protein_coding
description:
  Putative hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: HMP0721_1446
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: HMP0721_1450
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: HMP0721_1451
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMP0721_1465
symbol: era
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMP0721_1467
symbol: ybeY
gene_biotype: protein_coding
description:
  Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMP0721_1469
symbol: EFV01415.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase family protein; COG: COG0406; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: HMP0721_1476
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMP0721_1477
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMP0721_1479
symbol: ecfA
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: HMP0721_1482
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMP0721_1484
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMP0721_1485
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMP0721_1487
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMP0721_1489
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMP0721_1490
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMP0721_1491
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMP0721_1492
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMP0721_1494
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMP0721_1495
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMP0721_1496
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMP0721_1497
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMP0721_1498
symbol: rpsN
gene_biotype: protein_coding
description:
  Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: HMP0721_1499
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMP0721_1500
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMP0721_1501
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMP0721_1502
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMP0721_1504
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMP0721_1505
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMP0721_1506
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMP0721_1507
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMP0721_1508
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMP0721_1509
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMP0721_1511
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: HMP0721_1512
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMP0721_1513
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: HMP0721_1514
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMP0721_1515
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMP0721_1517
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMP0721_1518
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMP0721_1532
symbol: EFV01369.1
gene_biotype: protein_coding
description:
  Transporter, lactate permease (LctP) family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HMP0721_1536
symbol: EFV01373.1
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: HMP0721_1537
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: HMP0721_1542
symbol: pflA
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: HMP0721_1558
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMP0721_1561
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: HMP0721_1563
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMP0721_1564
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMP0721_1565
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMP0721_1566
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMP0721_1568
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMP0721_1569
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: HMP0721_1578
symbol: EFV01197.1
gene_biotype: protein_coding
description:
  Putative CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: HMP0721_1592
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: HMP0721_1593
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: HMP0721_1602
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.


ensembl_gene_id: HMP0721_1604
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: HMP0721_1605
symbol: EFV01224.1
gene_biotype: protein_coding
description:
  Acyltransferase; COG: COG0204; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: HMP0721_1608
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: HMP0721_1609
symbol: cobI
gene_biotype: protein_coding
description:
  Precorrin-2 C(20)-methyltransferase; COG: COG2243; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: HMP0721_1612
symbol: cobB
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: HMP0721_1613
symbol: EFV01232.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMP0721_1615
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: HMP0721_1616
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: HMP0721_1645
symbol: EFV01264.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate-binding protein; COG: COG0803; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: HMP0721_1652
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: HMP0721_1656
symbol: EFV01275.1
gene_biotype: protein_coding
description:
  Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; COG: COG1301; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HMP0721_1666
symbol: crt
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydratase; COG: COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: HMP0721_1667
symbol: EFV01286.1
gene_biotype: protein_coding
description:
  acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: HMP0721_1670
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMP0721_1671
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMP0721_1672
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HMP0721_1673
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HMP0721_1674
symbol: fabHA
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMP0721_1677
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMP0721_1678
symbol: fabF
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMP0721_1679
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: HMP0721_1704
symbol: EFV01323.1
gene_biotype: protein_coding
description:
  ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: HMP0721_1707
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMP0721_1708
symbol: mtnN
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMP0721_1709
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: HMP0721_1735
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMP0721_1736
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: HMP0721_1741
symbol: EFV01360.1
gene_biotype: protein_coding
description:
  Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: HMP0721_1764
symbol: ddl
gene_biotype: protein_coding
description:
  D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: HMP0721_1780
symbol: larC
gene_biotype: protein_coding
description:
  TIGR00299 family protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: HMP0721_1795
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: HMP0721_1820
symbol: metF
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase (NAD(P)H); COG: COG0685; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: HMP0721_1833
symbol: sufS
gene_biotype: protein_coding
description:
  Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: HMP0721_1837
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMP0721_1838
symbol: rsmI
gene_biotype: protein_coding
description:
  S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMP0721_1839
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMP0721_1841
symbol: EFV01102.1
gene_biotype: protein_coding
description:
  DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: HMP0721_1844
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMP0721_1853
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: HMP0721_1854
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMP0721_1855
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMP0721_1859
symbol: EFV01120.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: HMP0721_1860
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMP0721_1862
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMP0721_1863
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMP0721_1865
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: HMP0721_1866
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMP0721_1867
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMP0721_1872
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: HMP0721_1873
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: HMP0721_1875
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: HMP0721_1880
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HMP0721_1885
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMP0721_1935
symbol: EFV00975.1
gene_biotype: protein_coding
description:
  LysR substrate binding domain protein; COG: COG0583; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMP0721_1940
symbol: acpP-2
gene_biotype: protein_coding
description:
  Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: HMP0721_1947
symbol: EFV00987.1
gene_biotype: protein_coding
description:
  Hsp20/alpha crystallin family protein; COG: COG0071; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: HMP0721_1972
symbol: EFV00939.1
gene_biotype: protein_coding
description:
  ATP:cob(I)alamin adenosyltransferase; COG: COG2096; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: HMP0721_1997
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMP0721_1998
symbol: EFV00833.1
gene_biotype: protein_coding
description:
  DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMP0721_1999
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMP0721_2000
symbol: ptsP
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: HMP0721_2006
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMP0721_2009
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMP0721_2010
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HMP0721_2013
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMP0721_2015
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: HMP0721_2057
symbol: metN
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMP0721_2062
symbol: EFV00897.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, YfiH family; COG: COG1496; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: HMP0721_2077
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMP0721_2080
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMP0721_2087
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMP0721_2100
symbol: greA
gene_biotype: protein_coding
description:
  Prokaryotic transcription elongation factor, GreA/GreB domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMP0721_2142
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HMP0721_2146
symbol: EFV00697.1
gene_biotype: protein_coding
description:
  4Fe-4S binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: HMP0721_2181
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMP0721_2183
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: HMP0721_2186
symbol: EFV00737.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: HMP0721_2195
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: HMP0721_2213
symbol: EFV00764.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase/isomerase family protein; COG: COG0427; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: HMP0721_2226
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: HMP0721_2236
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: HMP0721_2240
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: HMP0721_2241
symbol: pdxB-5
gene_biotype: protein_coding
description:
  4-phosphoerythronate dehydrogenase; COG: COG1052; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMP0721_2244
symbol: nfo
gene_biotype: protein_coding
description:
  Apurinic endonuclease (APN1); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: HMP0721_2245
symbol: EFV00683.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; COG: COG0053; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: HMP0721_2248
symbol: EFV00652.1
gene_biotype: protein_coding
description:
  Transporter, SSS family; COG: COG0591; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: HMP0721_2253
symbol: EFV00657.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: HMP0721_2262
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; COG: COG0540; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMP0721_2264
symbol: EFV00668.1
gene_biotype: protein_coding
description:
  Amidohydrolase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: HMP0721_2265
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; COG: COG0284; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: HMP0721_2285
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMP0721_2334
symbol: EFV00518.1
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMP0721_2335
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: HMP0721_2336
symbol: grpE
gene_biotype: protein_coding
description:
  Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]


ensembl_gene_id: HMP0721_2338
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: HMP0721_2345
symbol: cas1-3
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1, NMENI subtype; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMP0721_2346
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMP0721_2363
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; COG: COG0136; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: HMP0721_2364
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HMP0721_2365
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HMP0721_2366
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: HMP0721_2372
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: HMP0721_2373
symbol: EFV00556.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: HMP0721_2375
symbol: EFV00558.1
gene_biotype: protein_coding
description:
  Tat pathway signal sequence domain protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: HMP0721_2447
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HMP0721_2448
symbol: aroD
gene_biotype: protein_coding
description:
  Putative 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: HMP0721_2476
symbol: menG
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: HMP0721_2516
symbol: EFV00406.1
gene_biotype: protein_coding
description:
  Putative pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; COG: COG0214; Belongs to the PdxS/SNZ family.


# pathwayInfo

id: CL:100
description: Iron hydrogenase, and NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:100_Iron_hydrogenase,_and_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:1014
description: Mixed, incl. mRNA processing, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1014_Mixed,_incl._mRNA_processing,_and_K_Homology_domain,_type_2


id: CL:1039
description: Mixed, incl. CTP metabolic process, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1039_Mixed,_incl._CTP_metabolic_process,_and_Transcription_termination


id: CL:1041
description: Ribosomal small subunit biogenesis, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1041_Ribosomal_small_subunit_biogenesis,_and_Initiation_factor


id: CL:1085
description: RNA polymerase, and DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1085_RNA_polymerase,_and_DNA-binding_domain_superfamily


id: CL:1089
description: RNA polymerase, and Helicase superfamily c-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1089_RNA_polymerase,_and_Helicase_superfamily_c-terminal_domain


id: CL:110
description: Cell redox homeostasis, and acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:110_Cell_redox_homeostasis,_and_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:1109
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1109_Proton-transporting_ATP_synthase_complex


id: CL:112
description: Mixed, incl. FAD dependent oxidoreductase, and Lipoic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:112_Mixed,_incl._FAD_dependent_oxidoreductase,_and_Lipoic_acid_metabolism


id: CL:1134
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1134_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_tRNA-binding_domain


id: CL:1150
description: Threonyl/alanyl tRNA synthetase, SAD, and histidine-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1150_Threonyl/alanyl_tRNA_synthetase,_SAD,_and_histidine-tRNA_ligase_activity


id: CL:1166
description: Mixed, incl. 50S ribosome-binding GTPase, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1166_Mixed,_incl._50S_ribosome-binding_GTPase,_and_Ribosome_assembly


id: CL:1169
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1169_Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:1180
description: Mixed, incl. 50S ribosome-binding GTPase, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1180_Mixed,_incl._50S_ribosome-binding_GTPase,_and_Peptidase_S26


id: CL:1197
description: Mixed, incl. Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1197_Mixed,_incl._Chaperone,_and_Protein_catabolic_process


id: CL:1198
description: Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1198_Chaperone,_and_Protein_catabolic_process


id: CL:1200
description: Chaperone, and Antigen processing-Cross presentation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1200_Chaperone,_and_Antigen_processing-Cross_presentation


id: CL:1229
description: Peroxidase, and Redox-active center
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1229_Peroxidase,_and_Redox-active_center


id: CL:1243
description: Mixed, incl. Rhodanese-like domain, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1243_Mixed,_incl._Rhodanese-like_domain,_and_TGS_domain


id: CL:1244
description: Rhodanese-like domain, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1244_Rhodanese-like_domain,_and_Carbon-sulfur_lyase_activity


id: CL:1253
description: Mixed, incl. TGS domain, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1253_Mixed,_incl._TGS_domain,_and_DHH_family


id: CL:1265
description: Mixed, incl. Catalytic activity, acting on DNA, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1265_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_tRNA_processing


id: CL:1266
description: Mixed, incl. Mismatch repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1266_Mixed,_incl._Mismatch_repair,_and_SOS_response


id: CL:1268
description: Mismatch repair, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1268_Mismatch_repair,_and_DNA_repair_complex


id: CL:1270
description: DNA damage sensor activity, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1270_DNA_damage_sensor_activity,_and_DNA_replication


id: CL:1272
description: DNA damage sensor activity, and Calcineurin-like phosphoesterase domain, ApaH type
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1272_DNA_damage_sensor_activity,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type


id: CL:1274
description: Mixed, incl. 3-5 exonuclease, and Rad50/SbcC-type AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1274_Mixed,_incl._3-5_exonuclease,_and_Rad50/SbcC-type_AAA_domain


id: CL:1311
description: DNA polymerase complex, and DNA polymerase III, alpha subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1311_DNA_polymerase_complex,_and_DNA_polymerase_III,_alpha_subunit


id: CL:133
description: Pyruvate metabolism, and Citrate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:133_Pyruvate_metabolism,_and_Citrate_synthase


id: CL:1339
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1339_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_ParB/Sulfiredoxin


id: CL:1341
description: Mixed, incl. ParB/Sulfiredoxin, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1341_Mixed,_incl._ParB/Sulfiredoxin,_and_tRNA_processing


id: CL:1343
description: Mixed, incl. ParB/Sulfiredoxin, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1343_Mixed,_incl._ParB/Sulfiredoxin,_and_RNA_(guanine-N7)-methylation


id: CL:136
description: Mixed, incl. Citrate synthase, and Allosteric enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:136_Mixed,_incl._Citrate_synthase,_and_Allosteric_enzyme


id: CL:1370
description: Topoisomerase, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1370_Topoisomerase,_and_DNA_replication_initiation


id: CL:1380
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1380_Mixed,_incl._glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Inosine_triphosphate_pyrophosphatase-like

description:
  Mixed, incl. glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Inosine triphosphate pyrophosphatase-like


id: CL:1382
description: Mixed, incl. glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and rRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1382_Mixed,_incl._glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_rRNA_catabolic_process


id: CL:1396
description: Mixed, incl. DTXR-type HTH domain, and (Uracil-5)-methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1396_Mixed,_incl._DTXR-type_HTH_domain,_and_(Uracil-5)-methyltransferase_family


id: CL:1405
description: Mixed, incl. RNA-binding S4 domain, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1405_Mixed,_incl._RNA-binding_S4_domain,_and_THUMP_domain


id: CL:1406
description: Mixed, incl. THUMP domain, and Ribonuclease III family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1406_Mixed,_incl._THUMP_domain,_and_Ribonuclease_III_family


id: CL:1417
description: RNA-binding S4 domain, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1417_RNA-binding_S4_domain,_and_Alanine_racemase,_N-terminal


id: CL:1426
description: Mixed, incl. Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT), and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1426_Mixed,_incl._Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT),_and_Flagellar_assembly


id: CL:1428
description: Mixed, incl. rRNA methyltransferase activity, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1428_Mixed,_incl._rRNA_methyltransferase_activity,_and_PASTA_domain


id: CL:1430
description: Mixed, incl. PASTA domain, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1430_Mixed,_incl._PASTA_domain,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:1440
description: Mixed, incl. NusB family, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1440_Mixed,_incl._NusB_family,_and_Formyl_transferase


id: CL:1452
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1452_Mixed,_incl._Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like,_and_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)

description:
  Mixed, incl. Aspartyl/glutamyl-tRNA amidotransferase subunit B-like, and Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)


id: CL:1461
description: Mixed, incl. Folate biosynthesis, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1461_Mixed,_incl._Folate_biosynthesis,_and_Primosome


id: CL:1463
description: Mixed, incl. Primosome, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1463_Mixed,_incl._Primosome,_and_tRNA_pseudouridine_synthesis


id: CL:1477
description: Mixed, incl. ATP cone domain, and Uracil-DNA glycosylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1477_Mixed,_incl._ATP_cone_domain,_and_Uracil-DNA_glycosylase-like


id: CL:1491
description: Mixed, incl. K Homology domain, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1491_Mixed,_incl._K_Homology_domain,_and_Bacterial_nucleoid


id: CL:1505
description: Mixed, incl. Cell division, and Lipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1505_Mixed,_incl._Cell_division,_and_Lipid_biosynthetic_process


id: CL:1506
description: Mixed, incl. Cell division, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1506_Mixed,_incl._Cell_division,_and_Signal


id: CL:1507
description: Mixed, incl. Cell division, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1507_Mixed,_incl._Cell_division,_and_Signal


id: CL:1508
description: Mixed, incl. Cell division, and Cell wall macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1508_Mixed,_incl._Cell_division,_and_Cell_wall_macromolecule_catabolic_process


id: CL:1509
description: Mixed, incl. Cell division, and Amino-acid racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1509_Mixed,_incl._Cell_division,_and_Amino-acid_racemase_activity


id: CL:151
description: Mixed, incl. Phosphate acetyltransferase, and Acylphosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:151_Mixed,_incl._Phosphate_acetyltransferase,_and_Acylphosphatase


id: CL:1511
description: Cell division, and Amino-acid racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1511_Cell_division,_and_Amino-acid_racemase_activity


id: CL:1512
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1512_Cell_shape,_and_Cell_division_site


id: CL:1516
description: Mur ligase, C-terminal, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1516_Mur_ligase,_C-terminal,_and_PASTA_domain


id: CL:1541
description: Septum formation initiator, and SpoVT-AbrB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1541_Septum_formation_initiator,_and_SpoVT-AbrB_domain


id: CL:1556
description: Mixed, incl. Peptidase family M50, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1556_Mixed,_incl._Peptidase_family_M50,_and_Methyltransferase_complex


id: CL:1580
description: Mixed, incl. Cell wall macromolecule catabolic process, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1580_Mixed,_incl._Cell_wall_macromolecule_catabolic_process,_and_Immunoglobulin-like_fold


id: CL:1581
description: Mixed, incl. Cell wall macromolecule catabolic process, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1581_Mixed,_incl._Cell_wall_macromolecule_catabolic_process,_and_NAD+_kinase_activity


id: CL:1583
description: Glycoside hydrolase, family 25, and Fimbrial isopeptide formation D2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1583_Glycoside_hydrolase,_family_25,_and_Fimbrial_isopeptide_formation_D2_domain


id: CL:1605
description: Sortase C, and LPXTG cell wall anchor motif
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1605_Sortase_C,_and_LPXTG_cell_wall_anchor_motif


id: CL:1617
description: Mixed, incl. Cell Wall Hydrolase, and Cell division protein FtsX
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1617_Mixed,_incl._Cell_Wall_Hydrolase,_and_Cell_division_protein_FtsX


id: CL:1619
description: Cell Wall Hydrolase, and Cell division protein FtsX
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1619_Cell_Wall_Hydrolase,_and_Cell_division_protein_FtsX


id: CL:163
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:163_Branched-chain_amino_acid_metabolic_process


id: CL:1637
description: Mixed, incl. Peptidase M24, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1637_Mixed,_incl._Peptidase_M24,_and_PP-loop_family


id: CL:1650
description: Mixed, incl. Serine-type exopeptidase activity, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1650_Mixed,_incl._Serine-type_exopeptidase_activity,_and_Peptidase_U32


id: CL:1653
description: Mixed, incl. Peptidase U32, and Organelle lumen
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1653_Mixed,_incl._Peptidase_U32,_and_Organelle_lumen


id: CL:1675
description: Mixed, incl. Isoprenoid metabolic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1675_Mixed,_incl._Isoprenoid_metabolic_process,_and_DNA_catabolic_process


id: CL:1676
description: Mostly uncharacterized, incl. DNA catabolic process, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1676_Mostly_uncharacterized,_incl._DNA_catabolic_process,_and_Host_cell


id: CL:1677
description: Mixed, incl. DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1677_Mixed,_incl._DNA_catabolic_process,_and_NusB_family


id: CL:1680
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1680_DNA_catabolic_process,_and_NusB_family


id: CL:1697
description: Mixed, incl. Host cell, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1697_Mixed,_incl._Host_cell,_and_NAD+_kinase_activity


id: CL:1712
description: Isoprenoid metabolic process, and Peptidase M15B
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1712_Isoprenoid_metabolic_process,_and_Peptidase_M15B


id: CL:1714
description: Mixed, incl. Peptidase family M50, and Glycerolipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1714_Mixed,_incl._Peptidase_family_M50,_and_Glycerolipid_biosynthetic_process


id: CL:1741
description: Mixed, incl. AzlC protein, and Branched-chain amino acid transport, AzlD
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1741_Mixed,_incl._AzlC_protein,_and_Branched-chain_amino_acid_transport,_AzlD


id: CL:1755
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1755_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Zinc-ribbon_domain


id: CL:1757
description: Mixed, incl. Telomere recombination, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1757_Mixed,_incl._Telomere_recombination,_and_Coenzyme_A_biosynthesis


id: CL:1774
description: tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1774_tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:1786
description: Mixed, incl. Protein of unknown function DUF4238, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1786_Mixed,_incl._Protein_of_unknown_function_DUF4238,_and_Peptidase_M41


id: CL:1788
description: Mixed, incl. Dihydrouridine synthase (Dus), and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1788_Mixed,_incl._Dihydrouridine_synthase_(Dus),_and_Coenzyme_A_biosynthesis


id: CL:1802
description: Mixed, incl. Protein of unknown function DUF4238, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1802_Mixed,_incl._Protein_of_unknown_function_DUF4238,_and_DNA_methylation_on_adenine


id: CL:1813
description: Mixed, incl. Bacterial microcompartment, and Translocase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1813_Mixed,_incl._Bacterial_microcompartment,_and_Translocase


id: CL:1814
description: Bacterial microcompartment, and Aldehyde dehydrogenase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1814_Bacterial_microcompartment,_and_Aldehyde_dehydrogenase,_N-terminal


id: CL:1816
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1816_Mixed,_incl._Aldehyde_dehydrogenase,_N-terminal,_and_Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA

description:
  Mixed, incl. Aldehyde dehydrogenase, N-terminal, and Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA


id: CL:1817
description: Mixed, incl. Diol metabolic process, and CcmK-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1817_Mixed,_incl._Diol_metabolic_process,_and_CcmK-like_superfamily


id: CL:1819
description: Diol metabolic process, and Cobalamin (vitamin B12)-dependent enzyme, catalytic
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1819_Diol_metabolic_process,_and_Cobalamin_(vitamin_B12)-dependent_enzyme,_catalytic


id: CL:1843
description: Aldehyde dehydrogenase, N-terminal, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1843_Aldehyde_dehydrogenase,_N-terminal,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1861
description: Bacterial microcompartment, and Amine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1861_Bacterial_microcompartment,_and_Amine_transport


id: CL:1862
description: Bacterial microcompartment, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1862_Bacterial_microcompartment,_and_Ammonia-lyase_activity


id: CL:1863
description: Ethanolamine metabolic process, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1863_Ethanolamine_metabolic_process,_and_Ammonia-lyase_activity


id: CL:1877
description: Bacterial microcompartments protein, conserved site, and EutN/Ccml superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1877_Bacterial_microcompartments_protein,_conserved_site,_and_EutN/Ccml_superfamily


id: CL:1888
description: Mixed, incl. Amine transport, and ANTAR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1888_Mixed,_incl._Amine_transport,_and_ANTAR_domain


id: CL:1905
description: Mixed, incl. Electron transport, and Transferase activity, transferring sulphur-containing groups
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1905_Mixed,_incl._Electron_transport,_and_Transferase_activity,_transferring_sulphur-containing_groups


id: CL:1906
description: Mixed, incl. Electron transport, and Transferase activity, transferring sulphur-containing groups
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1906_Mixed,_incl._Electron_transport,_and_Transferase_activity,_transferring_sulphur-containing_groups


id: CL:1907
description: Mixed, incl. Electron transport, and Transferase activity, transferring sulphur-containing groups
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1907_Mixed,_incl._Electron_transport,_and_Transferase_activity,_transferring_sulphur-containing_groups


id: CL:1908
description: Mixed, incl. Electron transport, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1908_Mixed,_incl._Electron_transport,_and_Methylthiotransferase


id: CL:1924
description: Mixed, incl. Methylthiotransferase, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1924_Mixed,_incl._Methylthiotransferase,_and_Aminopeptidase


id: CL:1935
description: Mixed, incl. [2Fe-2S] cluster assembly, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1935_Mixed,_incl._[2Fe-2S]_cluster_assembly,_and_THUMP_domain


id: CL:1950
description: Mixed, incl. Sulfatase, and Cytidylate kinase-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1950_Mixed,_incl._Sulfatase,_and_Cytidylate_kinase-like_family


id: CL:196
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:196_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1961
description: Mixed, incl. Coenzyme F420 binding, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1961_Mixed,_incl._Coenzyme_F420_binding,_and_Prenyltransferase_activity


id: CL:1972
description: Mixed, incl. Signal transduction, and Transcription regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1972_Mixed,_incl._Signal_transduction,_and_Transcription_regulation


id: CL:1973
description: Mixed, incl. Signal transduction, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1973_Mixed,_incl._Signal_transduction,_and_Phosphate_ion_transport


id: CL:1974
description: Mixed, incl. Signal transduction, and RmlC-like jelly roll fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1974_Mixed,_incl._Signal_transduction,_and_RmlC-like_jelly_roll_fold


id: CL:1977
description: Phosphorelay signal transduction system, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1977_Phosphorelay_signal_transduction_system,_and_Histidine_kinase


id: CL:1980
description: Two-component regulatory system, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1980_Two-component_regulatory_system,_and_Nucleotide_cyclase


id: CL:199
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:199_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1994
description: PocR domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:1994_PocR_domain,_and_cheY-homologous_receiver_domain


id: CL:2003
description: Mixed, incl. Phosphorelay sensor kinase activity, and Helix_turn_helix, cAMP Regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2003_Mixed,_incl._Phosphorelay_sensor_kinase_activity,_and_Helix_turn_helix,_cAMP_Regulatory_protein


id: CL:2022
description: Mixed, incl. Deglycase PfpI, and Organic radical enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2022_Mixed,_incl._Deglycase_PfpI,_and_Organic_radical_enzyme_activase


id: CL:2035
description: Mixed, incl. Phosphate ion transport, and Protein of unknown function DUF975
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2035_Mixed,_incl._Phosphate_ion_transport,_and_Protein_of_unknown_function_DUF975


id: CL:2037
description: Phosphate ion transport, and Protein of unknown function DUF975
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2037_Phosphate_ion_transport,_and_Protein_of_unknown_function_DUF975


id: CL:2061
description: Mixed, incl. Heme, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2061_Mixed,_incl._Heme,_and_Glutathione_metabolic_process


id: CL:2072
description: Mixed, incl. Transcription regulation, and BCCT transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2072_Mixed,_incl._Transcription_regulation,_and_BCCT_transporter_family


id: CL:2073
description: Mixed, incl. Transcription regulator HTH, GntR, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2073_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:2075
description: Mixed, incl. Transcription regulator HTH, GntR, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2075_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_LacI-type_HTH_domain


id: CL:2076
description: GntR, C-terminal, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2076_GntR,_C-terminal,_and_LacI-type_HTH_domain


id: CL:2087
description: Mixed, incl. BCCT transporter family, and AraC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2087_Mixed,_incl._BCCT_transporter_family,_and_AraC-like_ligand_binding_domain


id: CL:2109
description: Mixed, incl. DNA binding HTH domain, Fis-type, and HpaB/PvcC/4-BUDH
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2109_Mixed,_incl._DNA_binding_HTH_domain,_Fis-type,_and_HpaB/PvcC/4-BUDH


id: CL:2127
description: Mostly uncharacterized, incl. Sulfur compound metabolic process, and protein-DNA complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2127_Mostly_uncharacterized,_incl._Sulfur_compound_metabolic_process,_and_protein-DNA_complex


id: CL:2128
description: Mostly uncharacterized, incl. protein-DNA complex, and Elp3/MiaA/NifB-like, radical SAM core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2128_Mostly_uncharacterized,_incl._protein-DNA_complex,_and_Elp3/MiaA/NifB-like,_radical_SAM_core_domain


id: CL:2129
description: Mostly uncharacterized, incl. PPIC-type PPIASE domain, and protein-DNA complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2129_Mostly_uncharacterized,_incl._PPIC-type_PPIASE_domain,_and_protein-DNA_complex


id: CL:2130
description: Mostly uncharacterized, incl. Primosome complex, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2130_Mostly_uncharacterized,_incl._Primosome_complex,_and_ELP3/YhcC


id: CL:2131
description: Mixed, incl. Primosome complex, and SEC-C motif
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2131_Mixed,_incl._Primosome_complex,_and_SEC-C_motif


id: CL:2134
description: Mixed, incl. Primosome complex, and SEC-C motif
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2134_Mixed,_incl._Primosome_complex,_and_SEC-C_motif


id: CL:2156
description: Mixed, incl. ELP3/YhcC, and RelA/SpoT
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2156_Mixed,_incl._ELP3/YhcC,_and_RelA/SpoT


id: CL:2165
description: Mixed, incl. PPIC-type PPIASE domain, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2165_Mixed,_incl._PPIC-type_PPIASE_domain,_and_CarD-like/TRCF_domain


id: CL:2167
description: Mixed, incl. CarD-like/TRCF domain, and PPIC-type PPIASE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2167_Mixed,_incl._CarD-like/TRCF_domain,_and_PPIC-type_PPIASE_domain


id: CL:2189
description: Mostly uncharacterized, incl. Predicted metal-binding protein (DUF2284), and ThiC/Bza, core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2189_Mostly_uncharacterized,_incl._Predicted_metal-binding_protein_(DUF2284),_and_ThiC/Bza,_core_domain


id: CL:2190
description: Mixed, incl. Predicted metal-binding protein (DUF2284), and ThiC/Bza, core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2190_Mixed,_incl._Predicted_metal-binding_protein_(DUF2284),_and_ThiC/Bza,_core_domain


id: CL:2191
description: Mixed, incl. Predicted metal-binding protein (DUF2284), and ThiC/Bza, core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2191_Mixed,_incl._Predicted_metal-binding_protein_(DUF2284),_and_ThiC/Bza,_core_domain


id: CL:2193
description: Mixed, incl. Predicted metal-binding protein (DUF2284), and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2193_Mixed,_incl._Predicted_metal-binding_protein_(DUF2284),_and_LexA-like


id: CL:2209
description: ThiC/Bza, core domain, and Methyltransferase, class B
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2209_ThiC/Bza,_core_domain,_and_Methyltransferase,_class_B


id: CL:2220
description: Mixed, incl. WD40/YVTN repeat-like-containing domain superfamily, and Alanine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2220_Mixed,_incl._WD40/YVTN_repeat-like-containing_domain_superfamily,_and_Alanine_transport


id: CL:2247
description: Mixed, incl. Iron-sulfur cluster assembly, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2247_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Primosome


id: CL:2249
description: Mixed, incl. Iron-sulfur cluster assembly, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2249_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Primosome


id: CL:2251
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2251_SUF_system_FeS_cluster_assembly,_SufBD,_and_Aminotransferase_class-V,_pyridoxal-phosphate_binding_site

description:
  SUF system FeS cluster assembly, SufBD, and Aminotransferase class-V, pyridoxal-phosphate binding site


id: CL:2263
description: Mixed, incl. Primosome, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2263_Mixed,_incl._Primosome,_and_DHH_family


id: CL:2282
description: Mixed, incl. Horizontal gene transfer, and Cellular carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2282_Mixed,_incl._Horizontal_gene_transfer,_and_Cellular_carbohydrate_metabolic_process


id: CL:2283
description: Mixed, incl. Horizontal gene transfer, and Cellular carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2283_Mixed,_incl._Horizontal_gene_transfer,_and_Cellular_carbohydrate_metabolic_process


id: CL:2285
description: Mixed, incl. Horizontal gene transfer, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2285_Mixed,_incl._Horizontal_gene_transfer,_and_Protein_tyrosine_kinase_activity


id: CL:2287
description: Mixed, incl. Horizontal gene transfer, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2287_Mixed,_incl._Horizontal_gene_transfer,_and_Type_II/IV_secretion_system_protein


id: CL:2290
description: Prokaryotic N-terminal methylation site, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2290_Prokaryotic_N-terminal_methylation_site,_and_Secretion


id: CL:2317
description: Mixed, incl. Protein tyrosine kinase activity, and Polymerase/histidinol phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2317_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Polymerase/histidinol_phosphatase-like


id: CL:2319
description: Mixed, incl. Regulation of sporulation, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2319_Mixed,_incl._Regulation_of_sporulation,_and_Regulation_of_catabolic_process


id: CL:2341
description: Mixed, incl. DegV, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2341_Mixed,_incl._DegV,_and_S1_domain


id: CL:2343
description: Mixed, incl. DegV, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2343_Mixed,_incl._DegV,_and_Alkaline_shock_protein_Asp23


id: CL:2344
description: Mixed, incl. Cytidyltransferase-like domain, and Conserved hypothetical protein 95
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2344_Mixed,_incl._Cytidyltransferase-like_domain,_and_Conserved_hypothetical_protein_95


id: CL:2353
description: DegV, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2353_DegV,_and_Alkaline_shock_protein_Asp23


id: CL:2371
description: Protein kinase domain, and Homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2371_Protein_kinase_domain,_and_Homologous_recombination


id: CL:2381
description: Mixed, incl. Base excision repair, and Protein-tyrosine phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2381_Mixed,_incl._Base_excision_repair,_and_Protein-tyrosine_phosphatase-like


id: CL:2382
description: Mixed, incl. Protein-tyrosine phosphatase-like, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2382_Mixed,_incl._Protein-tyrosine_phosphatase-like,_and_RNA_capping


id: CL:2384
description: Mixed, incl. RNA capping, and 5-3 exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2384_Mixed,_incl._RNA_capping,_and_5-3_exonuclease_activity


id: CL:239
description: Mixed, incl. Inorganic diphosphatase activity, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:239_Mixed,_incl._Inorganic_diphosphatase_activity,_and_FAD_binding_domain


id: CL:2398
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2398_Mixed,_incl._Protein-tyrosine_phosphatase-like,_and_Biological_process_involved_in_symbiotic_interaction

description:
  Mixed, incl. Protein-tyrosine phosphatase-like, and Biological process involved in symbiotic interaction


id: CL:2411
description: Mixed, incl. Base-excision repair, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2411_Mixed,_incl._Base-excision_repair,_and_AsnC-type_HTH_domain


id: CL:2412
description: Helix-hairpin-helix motif, and Exodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2412_Helix-hairpin-helix_motif,_and_Exodeoxyribonuclease_activity


id: CL:2421
description: Uracil DNA N-glycosylase activity, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2421_Uracil_DNA_N-glycosylase_activity,_and_AsnC-type_HTH_domain


id: CL:2430
description: Mixed, incl. Amino acid salvage, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2430_Mixed,_incl._Amino_acid_salvage,_and_Protein_ubiquitination


id: CL:2431
description: Mixed, incl. Amino acid salvage, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2431_Mixed,_incl._Amino_acid_salvage,_and_Protein_ubiquitination


id: CL:2434
description: Mixed, incl. Amino acid salvage, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2434_Mixed,_incl._Amino_acid_salvage,_and_Protein_ubiquitination


id: CL:2446
description: Mixed, incl. Protein ubiquitination, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2446_Mixed,_incl._Protein_ubiquitination,_and_rRNA_pseudouridine_synthesis


id: CL:2466
description: Mixed, incl. Arsenical resistance operon protein ArsD, and YjbQ-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2466_Mixed,_incl._Arsenical_resistance_operon_protein_ArsD,_and_YjbQ-like_superfamily


id: CL:2480
description: Mixed, incl. Nitrogen metabolism, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2480_Mixed,_incl._Nitrogen_metabolism,_and_Glutamate_metabolic_process


id: CL:2481
description: Mixed, incl. Nitrogen metabolism, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2481_Mixed,_incl._Nitrogen_metabolism,_and_Glutamate_metabolic_process


id: CL:2482
description: Mixed, incl. Nitrogen metabolism, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2482_Mixed,_incl._Nitrogen_metabolism,_and_Glutamate_metabolic_process


id: CL:2486
description: Glutamate metabolic process, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2486_Glutamate_metabolic_process,_and_Ammonia_ligase_activity


id: CL:2511
description: Rubredoxin-oxygen oxidoreductase, and Response to reactive oxygen species
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2511_Rubredoxin-oxygen_oxidoreductase,_and_Response_to_reactive_oxygen_species


id: CL:2529
description: Nickel cation binding, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2529_Nickel_cation_binding,_and_Sulfur_metabolism


id: CL:253
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:253_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:254
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:254_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:2540
description: Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2540_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ATPase_complex


id: CL:2542
description: Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2542_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ATPase_complex


id: CL:2543
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2543_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ATPase_complex


id: CL:255
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:255_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:2557
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2557_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Biotin_and_Thiamin_Synthesis_associated_domain

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Biotin and Thiamin Synthesis associated domain


id: CL:256
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:256_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:257
description: Glycolytic process, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:257_Glycolytic_process,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:2586
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2586_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2587
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2587_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2588
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2588_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2589
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2589_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2591
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2591_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2592
description: Mixed, incl. Glycosyltransferase 2-like, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2592_Mixed,_incl._Glycosyltransferase_2-like,_and_Bacterial_sugar_transferase


id: CL:2595
description: Cell aggregation, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2595_Cell_aggregation,_and_Bacterial_sugar_transferase


id: CL:260
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:260_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:2610
description: Glycosyltransferase 2-like, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2610_Glycosyltransferase_2-like,_and_Bacterial_sugar_transferase


id: CL:2620
description: Polyketide sugar unit biosynthesis, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2620_Polyketide_sugar_unit_biosynthesis,_and_NAD(P)-binding_domain


id: CL:2644
description: Glucan metabolic process, and 4-alpha-glucanotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2644_Glucan_metabolic_process,_and_4-alpha-glucanotransferase_activity


id: CL:2648
description: Glycogen metabolic process, and 4-alpha-glucanotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2648_Glycogen_metabolic_process,_and_4-alpha-glucanotransferase_activity


id: CL:2664
description: Mixed, incl. Polysaccharide biosynthesis protein, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2664_Mixed,_incl._Polysaccharide_biosynthesis_protein,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:2673
description: Mixed, incl. VanZ-like, and Cell morphogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2673_Mixed,_incl._VanZ-like,_and_Cell_morphogenesis


id: CL:2675
description: Mixed, incl. VanZ-like, and Cell morphogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2675_Mixed,_incl._VanZ-like,_and_Cell_morphogenesis


id: CL:2692
description: Mixed, incl. Protein of unknown function DUF6020, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2692_Mixed,_incl._Protein_of_unknown_function_DUF6020,_and_Glycosyltransferase_2-like


id: CL:2695
description: Protein of unknown function DUF6020, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2695_Protein_of_unknown_function_DUF6020,_and_Glycosyltransferase_2-like


id: CL:2710
description: Mixed, incl. Undecaprenyl-diphosphatase UppP, and mRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2710_Mixed,_incl._Undecaprenyl-diphosphatase_UppP,_and_mRNA_catabolic_process


id: CL:272
description: Fructose-bisphosphate aldolase class-II, and Triosephosphate isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:272_Fructose-bisphosphate_aldolase_class-II,_and_Triosephosphate_isomerase


id: CL:2722
description: Mostly uncharacterized, incl. HDIG domain, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2722_Mostly_uncharacterized,_incl._HDIG_domain,_and_NADPH-dependent_FMN_reductase


id: CL:2724
description: Mixed, incl. HDIG domain, and Peptidase M41-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2724_Mixed,_incl._HDIG_domain,_and_Peptidase_M41-like


id: CL:2746
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2746_Mixed,_incl._Phosphotransferase_activity,_alcohol_group_as_acceptor,_and_Glycerophospholipid_metabolism

description:
  Mixed, incl. Phosphotransferase activity, alcohol group as acceptor, and Glycerophospholipid metabolism


id: CL:2747
description: Mixed, incl. Carbohydrate kinase, FGGY, C-terminal, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2747_Mixed,_incl._Carbohydrate_kinase,_FGGY,_C-terminal,_and_Glycerophospholipid_metabolism


id: CL:2748
description: Mixed, incl. Pentose and glucuronate interconversions, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2748_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Putative_sugar-binding_domain


id: CL:2750
description: Mixed, incl. Pentose and glucuronate interconversions, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2750_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Putative_sugar-binding_domain


id: CL:2751
description: Mixed, incl. Pentose and glucuronate interconversions, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2751_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Putative_sugar-binding_domain


id: CL:2752
description: Mixed, incl. Carbohydrate kinase, FGGY, conserved site, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2752_Mixed,_incl._Carbohydrate_kinase,_FGGY,_conserved_site,_and_Putative_sugar-binding_domain


id: CL:2753
description: Carbohydrate kinase, FGGY, conserved site, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2753_Carbohydrate_kinase,_FGGY,_conserved_site,_and_Putative_sugar-binding_domain


id: CL:2755
description: Pentose and glucuronate interconversions, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2755_Pentose_and_glucuronate_interconversions,_and_SIS_domain


id: CL:2777
description: Pentose metabolic process, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2777_Pentose_metabolic_process,_and_HAD-hyrolase-like


id: CL:2787
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2787_Mixed,_incl._FGGY_family_of_carbohydrate_kinases,_N-terminal_domain,_and_Beta-lactamase/transpeptidase-like

description:
  Mixed, incl. FGGY family of carbohydrate kinases, N-terminal domain, and Beta-lactamase/transpeptidase-like


id: CL:2789
description: Inositol phosphate metabolism, and FGGY family of carbohydrate kinases, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2789_Inositol_phosphate_metabolism,_and_FGGY_family_of_carbohydrate_kinases,_N-terminal_domain


id: CL:2801
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2801_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2

description:
  Mixed, incl. Beta-lactamase/transpeptidase-like, and RNA polymerase sigma factor 70, region 4 type 2


id: CL:2812
description: Mixed, incl. Xylulokinase, and RuBisCO
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2812_Mixed,_incl._Xylulokinase,_and_RuBisCO


id: CL:2836
description: Glycerolipid metabolism, and FAD/NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2836_Glycerolipid_metabolism,_and_FAD/NAD(P)-binding_domain_superfamily


id: CL:2837
description: Mixed, incl. FAD dependent oxidoreductase, and CPE0013-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2837_Mixed,_incl._FAD_dependent_oxidoreductase,_and_CPE0013-like_superfamily


id: CL:2838
description: FAD dependent oxidoreductase, and CPE0013-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2838_FAD_dependent_oxidoreductase,_and_CPE0013-like_superfamily


id: CL:2840
description: FAD dependent oxidoreductase, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2840_FAD_dependent_oxidoreductase,_and_FAD_binding_domain


id: CL:2862
description: Mixed, incl. FAD dependent oxidoreductase, and CPE0013-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2862_Mixed,_incl._FAD_dependent_oxidoreductase,_and_CPE0013-like_superfamily


id: CL:2874
description: Glycerolipid metabolism, and glycerol-3-phosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2874_Glycerolipid_metabolism,_and_glycerol-3-phosphate_catabolic_process


id: CL:2875
description: Alditol metabolic process, and Glycerol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2875_Alditol_metabolic_process,_and_Glycerol_dehydrogenase


id: CL:2878
description: Glycerone kinase activity, and PTS system fructose IIA component
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2878_Glycerone_kinase_activity,_and_PTS_system_fructose_IIA_component


id: CL:290
description: Transketolase, thiamine diphosphate binding domain, and Transketolase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:290_Transketolase,_thiamine_diphosphate_binding_domain,_and_Transketolase,_C-terminal_domain


id: CL:2914
description: Mixed, incl. Import across plasma membrane, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2914_Mixed,_incl._Import_across_plasma_membrane,_and_ELP3/YhcC


id: CL:2915
description: Mixed, incl. Import across plasma membrane, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2915_Mixed,_incl._Import_across_plasma_membrane,_and_Zinc-binding_dehydrogenase


id: CL:2917
description: Mixed, incl. PIN-like domain superfamily, and RNA (C5-cytosine) methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2917_Mixed,_incl._PIN-like_domain_superfamily,_and_RNA_(C5-cytosine)_methyltransferase


id: CL:2929
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2929_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity,_and_Winged_helix-turn-helix_DNA-binding

description:
  protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, and Winged helix-turn-helix DNA-binding


id: CL:2939
description: Mixed, incl. ELP3/YhcC, and Glutamine synthetase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2939_Mixed,_incl._ELP3/YhcC,_and_Glutamine_synthetase,_C-terminal


id: CL:2949
description: Mostly uncharacterized, incl. Alpha/Beta hydrolase fold, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2949_Mostly_uncharacterized,_incl._Alpha/Beta_hydrolase_fold,_and_Aldo/keto_reductase_family


id: CL:2950
description: Mostly uncharacterized, incl. Alpha/Beta hydrolase fold, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2950_Mostly_uncharacterized,_incl._Alpha/Beta_hydrolase_fold,_and_Aldo/keto_reductase_family


id: CL:2951
description: Mixed, incl. Aldo/keto reductase family, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2951_Mixed,_incl._Aldo/keto_reductase_family,_and_Degradation_of_aromatic_compounds


id: CL:2952
description: Mixed, incl. Listeria/Bacterioides repeat, and Aldo/keto reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2952_Mixed,_incl._Listeria/Bacterioides_repeat,_and_Aldo/keto_reductase,_conserved_site


id: CL:2954
description: Mixed, incl. Listeria/Bacterioides repeat, and SpoVT-AbrB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2954_Mixed,_incl._Listeria/Bacterioides_repeat,_and_SpoVT-AbrB_domain


id: CL:2955
description: Mixed, incl. SpoVT-AbrB domain, and SGNH hydrolase-type esterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2955_Mixed,_incl._SpoVT-AbrB_domain,_and_SGNH_hydrolase-type_esterase_domain


id: CL:2964
description: Listeria/Bacterioides repeat, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2964_Listeria/Bacterioides_repeat,_and_Helix_turn_helix,_Lux_Regulon


id: CL:2974
description: Mixed, incl. Aldo/keto reductase, conserved site, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2974_Mixed,_incl._Aldo/keto_reductase,_conserved_site,_and_Flavodoxin


id: CL:2985
description: Mixed, incl. Limonene and pinene degradation, and Vitamin B6 metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2985_Mixed,_incl._Limonene_and_pinene_degradation,_and_Vitamin_B6_metabolic_process


id: CL:2987
description: Mixed, incl. Putative cyclase, and 6-phosphogluconate dehydrogenase, NADP-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2987_Mixed,_incl._Putative_cyclase,_and_6-phosphogluconate_dehydrogenase,_NADP-binding


id: CL:2999
description: Vitamin B6 metabolic process, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:2999_Vitamin_B6_metabolic_process,_and_Aldo/keto_reductase_family


id: CL:3010
description: Mixed, incl. GNAT domain, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3010_Mixed,_incl._GNAT_domain,_and_Alpha/Beta_hydrolase_fold


id: CL:3011
description: Mixed, incl. Alpha/Beta hydrolase fold, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3011_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_GNAT_domain


id: CL:3013
description: Mixed, incl. Serine aminopeptidase, S33, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3013_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Methyltransferase_domain


id: CL:3027
description: Mixed, incl. Esterase-like, and Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3027_Mixed,_incl._Esterase-like,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:3038
description: Mixed, incl. DTXR-type HTH domain, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3038_Mixed,_incl._DTXR-type_HTH_domain,_and_Peptidyl-serine_acetylation


id: CL:304
description: Mixed, incl. Intramolecular transferase activity, phosphotransferases, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:304_Mixed,_incl._Intramolecular_transferase_activity,_phosphotransferases,_and_SIS_domain


id: CL:3049
description: Mixed, incl. Alpha/beta hydrolase fold, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3049_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3060
description: Mixed, incl. Proton-transporting ATPase activity, rotational mechanism, and YjbQ-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3060_Mixed,_incl._Proton-transporting_ATPase_activity,_rotational_mechanism,_and_YjbQ-like_superfamily


id: CL:3061
description: Mixed, incl. Proton-transporting ATPase activity, rotational mechanism, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3061_Mixed,_incl._Proton-transporting_ATPase_activity,_rotational_mechanism,_and_HAD-hyrolase-like


id: CL:3064
description: Proton-transporting ATPase activity, rotational mechanism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3064_Proton-transporting_ATPase_activity,_rotational_mechanism


id: CL:3088
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3088_YjbQ-like_superfamily,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides

description:
  YjbQ-like superfamily, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides


id: CL:3098
description: Mixed, incl. LUD domain, and Menaquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3098_Mixed,_incl._LUD_domain,_and_Menaquinone_metabolic_process


id: CL:3100
description: Mixed, incl. RNA polymerase sigma-70 like, and DNA-binding HTH domain, TetR-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3100_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site


id: CL:3101
description: Mixed, incl. DNA-binding HTH domain, TetR-type, conserved site, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3101_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_conserved_site,_and_beta-Lactam_resistance


id: CL:3110
description: Mixed, incl. RNA polymerase sigma-70 like, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3110_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Aldo/keto_reductase_family


id: CL:3122
description: LUD domain, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3122_LUD_domain,_and_Polyprenyl_synthetase


id: CL:3139
description: Mixed, incl. Phenylalanine metabolism, and ACT domain pair
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3139_Mixed,_incl._Phenylalanine_metabolism,_and_ACT_domain_pair


id: CL:3140
description: Mixed, incl. ACT domain pair, and Phenylacetate-CoA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3140_Mixed,_incl._ACT_domain_pair,_and_Phenylacetate-CoA_ligase


id: CL:3142
description: Phenylacetate-CoA ligase, and ACT domain pair
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3142_Phenylacetate-CoA_ligase,_and_ACT_domain_pair


id: CL:3162
description: Mixed, incl. Flavodoxin domain, and acyl-CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3162_Mixed,_incl._Flavodoxin_domain,_and_acyl-CoA_hydrolase_activity


id: CL:3186
description: Mixed, incl. ABC transporters, and Tetrapyrrole metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3186_Mixed,_incl._ABC_transporters,_and_Tetrapyrrole_metabolic_process


id: CL:3188
description: Mixed, incl. ABC transporters, and Tetrapyrrole metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3188_Mixed,_incl._ABC_transporters,_and_Tetrapyrrole_metabolic_process


id: CL:3189
description: ABC transporters, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3189_ABC_transporters,_and_Homeobox-like_domain_superfamily


id: CL:3190
description: ABC transporters, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3190_ABC_transporters,_and_Homeobox-like_domain_superfamily


id: CL:3191
description: ABC transporters, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3191_ABC_transporters,_and_HTH_domain_AraC-type,_conserved_site


id: CL:3192
description: ABC transporters, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3192_ABC_transporters,_and_Homeobox-like_domain_superfamily


id: CL:3193
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3193_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Conserved_hypothetical_CHP02185,_integral_membrane

description:
  Mixed, incl. ABC transporter-like, conserved site, and Conserved hypothetical CHP02185, integral membrane


id: CL:3194
description: ABC transporters, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3194_ABC_transporters,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:3195
description: Mixed, incl. Mtb iron assimilation by chelation, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3195_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Tricarboxylic_acid_metabolic_process


id: CL:3196
description: Mixed, incl. Mtb iron assimilation by chelation, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3196_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Tricarboxylic_acid_metabolic_process


id: CL:3197
description: Mixed, incl. ABC transporter, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3197_Mixed,_incl._ABC_transporter,_and_Type_1_protein_exporter


id: CL:3210
description: Mixed, incl. UmuC domain, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3210_Mixed,_incl._UmuC_domain,_and_HTH_domain_AraC-type,_conserved_site


id: CL:322
description: DeoC/FbaB/LacD aldolase, and Transaldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:322_DeoC/FbaB/LacD_aldolase,_and_Transaldolase_activity


id: CL:3221
description: Mixed, incl. Tricarboxylic acid metabolic process, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3221_Mixed,_incl._Tricarboxylic_acid_metabolic_process,_and_Cobalt_transport_protein


id: CL:3223
description: Type 1 protein exporter, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3223_Type_1_protein_exporter,_and_Cobalt_transport_protein


id: CL:3241
description: Mixed, incl. Quinone metabolic process, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3241_Mixed,_incl._Quinone_metabolic_process,_and_Cobalt_transport_protein


id: CL:3245
description: Tricarboxylic acid metabolic process, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3245_Tricarboxylic_acid_metabolic_process,_and_Cobalt_transport_protein


id: CL:3271
description: Mixed, incl. Cobalt ion transport, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3271_Mixed,_incl._Cobalt_ion_transport,_and_ABC_transporter


id: CL:3282
description: Mixed, incl. Glutathione oxidoreductase activity, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3282_Mixed,_incl._Glutathione_oxidoreductase_activity,_and_Type_1_protein_exporter


id: CL:3285
description: Type 1 protein exporter, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3285_Type_1_protein_exporter,_and_Tricarboxylic_acid_metabolic_process


id: CL:3303
description: Mixed, incl. Type 1 protein exporter, and Sigma-54 interaction domain, ATP-binding site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3303_Mixed,_incl._Type_1_protein_exporter,_and_Sigma-54_interaction_domain,_ATP-binding_site_1


id: CL:3305
description: Sigma-54 interaction domain, ATP-binding site 1, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3305_Sigma-54_interaction_domain,_ATP-binding_site_1,_and_ABC-type_transporter_activity


id: CL:3328
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3328_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:3341
description: Mixed, incl. Phosphonate and phosphinate metabolism, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3341_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_Type_1_protein_exporter


id: CL:3342
description: Mixed, incl. Type 1 protein exporter, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3342_Mixed,_incl._Type_1_protein_exporter,_and_Sequence-specific_DNA_binding


id: CL:3346
description: Type 1 protein exporter, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3346_Type_1_protein_exporter,_and_Tricarboxylic_acid_metabolic_process


id: CL:3367
description: Phosphonate and phosphinate metabolism, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3367_Phosphonate_and_phosphinate_metabolism,_and_HTH_domain


id: CL:3377
description: Tetrapyrrole metabolic process, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3377_Tetrapyrrole_metabolic_process,_and_ECF_transporter,_substrate-specific_component


id: CL:3378
description: Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3378_Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:338
description: Phosphotransferase system, and HPr-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:338_Phosphotransferase_system,_and_HPr-like_superfamily


id: CL:3380
description: Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3380_Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3386
description: Tetrapyrrole methylase, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3386_Tetrapyrrole_methylase,_and_Cobalamin_metabolic_process


id: CL:3426
description: Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3426_Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3451
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3451_ECF_transporter,_substrate-specific_component,_and_Pyrimidine-containing_compound_transmembrane_transport

description:
  ECF transporter, substrate-specific component, and Pyrimidine-containing compound transmembrane transport


id: CL:3465
description: Type II CAAX prenyl endopeptidase Rce1-like, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3465_Type_II_CAAX_prenyl_endopeptidase_Rce1-like,_and_Transmembrane


id: CL:3483
description: Mixed, incl. ABC transporters, and YibE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3483_Mixed,_incl._ABC_transporters,_and_YibE/F-like


id: CL:3484
description: Mixed, incl. ABC transporters, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3484_Mixed,_incl._ABC_transporters,_and_Glutathione_metabolism


id: CL:3485
description: Mixed, incl. ABC transporters, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3485_Mixed,_incl._ABC_transporters,_and_Glutathione_metabolism


id: CL:3487
description: Mixed, incl. Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3487_Mixed,_incl._Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:3488
description: Mixed, incl. Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3488_Mixed,_incl._Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:3489
description: Mixed, incl. Ligand-gated channel activity, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3489_Mixed,_incl._Ligand-gated_channel_activity,_and_MacB,_ATP-binding_domain


id: CL:3491
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3491_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:3509
description: MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3509_MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:3511
description: Membrane component of ABC transporter, predicted, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3511_Membrane_component_of_ABC_transporter,_predicted,_and_MacB,_ATP-binding_domain


id: CL:3528
description: Mixed, incl. Lipoprotein, and Amino-acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3528_Mixed,_incl._Lipoprotein,_and_Amino-acid_transport


id: CL:3538
description: Mixed, incl. Flagellar assembly, and EF-G domain III/V-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3538_Mixed,_incl._Flagellar_assembly,_and_EF-G_domain_III/V-like


id: CL:3556
description: Mixed, incl. Glutathione metabolism, and Ether lipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3556_Mixed,_incl._Glutathione_metabolism,_and_Ether_lipid_metabolism


id: CL:3559
description: Mixed, incl. Ether lipid metabolism, and MFS transporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3559_Mixed,_incl._Ether_lipid_metabolism,_and_MFS_transporter_superfamily


id: CL:3584
description: Mixed, incl. ABC transporter, BtuC-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3584_Mixed,_incl._ABC_transporter,_BtuC-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:3585
description: Mixed, incl. ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3585_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:3589
description: Mixed, incl. Ferric-uptake regulator, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3589_Mixed,_incl._Ferric-uptake_regulator,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:3603
description: Mixed, incl. ABC transporter, TroCD-like, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3603_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Aquaporin-like


id: CL:3615
description: Mixed, incl. Heme binding, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3615_Mixed,_incl._Heme_binding,_and_ABC_3_transport_family


id: CL:362
description: Mixed, incl. Fatty acid biosynthesis, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:362_Mixed,_incl._Fatty_acid_biosynthesis,_and_ACP-like_superfamily


id: CL:3627
description: Mixed, incl. ABC transporter type 1, transmembrane domain MetI-like, and Glycine betaine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3627_Mixed,_incl._ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Glycine_betaine_transport


id: CL:3628
description: Mixed, incl. ABC transporter type 1, transmembrane domain MetI-like, and Glycine betaine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3628_Mixed,_incl._ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Glycine_betaine_transport


id: CL:363
description: Mixed, incl. Fatty acid biosynthesis, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:363_Mixed,_incl._Fatty_acid_biosynthesis,_and_ACP-like_superfamily


id: CL:3630
description: Mixed, incl. ABC transporter type 1, transmembrane domain MetI-like, and Glycine betaine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3630_Mixed,_incl._ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Glycine_betaine_transport


id: CL:3633
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3633_Mixed,_incl._Glycine_betaine_transport,_and_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain

description:
  Mixed, incl. Glycine betaine transport, and ABC-type glycine betaine transport system, substrate-binding domain


id: CL:364
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:364_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:365
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:365_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:3650
description: Mixed, incl. Acetyltransferase (GNAT) domain, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3650_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_FMN-binding_split_barrel


id: CL:366
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:366_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:367
description: Mixed, incl. Phosphopantetheine, and Antibiotic metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:367_Mixed,_incl._Phosphopantetheine,_and_Antibiotic_metabolic_process


id: CL:3670
description: YibE/F-like, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3670_YibE/F-like,_and_Type_1_protein_exporter


id: CL:3673
description: YibE/F-like, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3673_YibE/F-like,_and_MarR-type_HTH_domain


id: CL:368
description: Mixed, incl. Phosphopantetheine, and Antibiotic metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:368_Mixed,_incl._Phosphopantetheine,_and_Antibiotic_metabolic_process


id: CL:3689
description: Mixed, incl. Domain of unknown function DUF1858, and Elongation factor Tu GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3689_Mixed,_incl._Domain_of_unknown_function_DUF1858,_and_Elongation_factor_Tu_GTP_binding_domain


id: CL:3704
description: Mostly uncharacterized, incl. Thiamine biosynthetic process, and NAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3704_Mostly_uncharacterized,_incl._Thiamine_biosynthetic_process,_and_NAD_binding


id: CL:3705
description: Mixed, incl. Thiamine biosynthetic process, and Cytosine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3705_Mixed,_incl._Thiamine_biosynthetic_process,_and_Cytosine_transport


id: CL:3707
description: Mixed, incl. Thiamine biosynthetic process, and Cytosine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3707_Mixed,_incl._Thiamine_biosynthetic_process,_and_Cytosine_transport


id: CL:3708
description: Mixed, incl. Cytosine transport, and PdxA family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3708_Mixed,_incl._Cytosine_transport,_and_PdxA_family


id: CL:371
description: Chloramphenicol acetyltransferase-like domain superfamily, and Thioesterase type II, NRPS/PKS/S-FAS
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:371_Chloramphenicol_acetyltransferase-like_domain_superfamily,_and_Thioesterase_type_II,_NRPS/PKS/S-FAS


id: CL:3711
description: Mixed, incl. PdxA family, and YcxB-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3711_Mixed,_incl._PdxA_family,_and_YcxB-like_protein


id: CL:3728
description: Thiamine biosynthetic process, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3728_Thiamine_biosynthetic_process,_and_Nucleus


id: CL:3745
description: Mixed, incl. DapA-like, and Sodium:dicarboxylate symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3745_Mixed,_incl._DapA-like,_and_Sodium:dicarboxylate_symporter


id: CL:376
description: Phosphopantetheine binding, and AMP-binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:376_Phosphopantetheine_binding,_and_AMP-binding,_conserved_site


id: CL:3760
description: Mixed, incl. L-serine biosynthetic process, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3760_Mixed,_incl._L-serine_biosynthetic_process,_and_Phosphoglycerate_mutase_family


id: CL:3761
description: Mixed, incl. L-serine biosynthetic process, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3761_Mixed,_incl._L-serine_biosynthetic_process,_and_Sulfatase


id: CL:3762
description: Mixed, incl. L-serine biosynthetic process, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3762_Mixed,_incl._L-serine_biosynthetic_process,_and_Sulfatase


id: CL:3763
description: Mixed, incl. Sulfatase, and SLBB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3763_Mixed,_incl._Sulfatase,_and_SLBB_domain


id: CL:3783
description: Mixed, incl. PdxA family, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3783_Mixed,_incl._PdxA_family,_and_Putative_cyclase


id: CL:379
description: Chloramphenicol acetyltransferase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:379_Chloramphenicol_acetyltransferase-like_domain_superfamily


id: CL:3796
description: Mixed, incl. Rubrerythrin, and Arsenate reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3796_Mixed,_incl._Rubrerythrin,_and_Arsenate_reductase-like


id: CL:3805
description: Mostly uncharacterized, incl. Cytidylate kinase-like family, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3805_Mostly_uncharacterized,_incl._Cytidylate_kinase-like_family,_and_Response_to_antibiotic


id: CL:3806
description: Mixed, incl. Cytidylate kinase-like family, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3806_Mixed,_incl._Cytidylate_kinase-like_family,_and_Response_to_antibiotic


id: CL:3807
description: Mixed, incl. Cytidylate kinase-like family, and Multidrug and toxic compound extrusion MepA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3807_Mixed,_incl._Cytidylate_kinase-like_family,_and_Multidrug_and_toxic_compound_extrusion_MepA-like


id: CL:3809
description: Cytidylate kinase-like family, and Multidrug and toxic compound extrusion MepA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3809_Cytidylate_kinase-like_family,_and_Multidrug_and_toxic_compound_extrusion_MepA-like


id: CL:3821
description: Mixed, incl. Esterase-like, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3821_Mixed,_incl._Esterase-like,_and_Cation_efflux_family


id: CL:3831
description: Mixed, incl. AzlC protein, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3831_Mixed,_incl._AzlC_protein,_and_Acid_phosphatase_homologues


id: CL:3846
description: Mixed, incl. Nickel, and PurE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3846_Mixed,_incl._Nickel,_and_PurE_domain


id: CL:3866
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3866_Mostly_uncharacterized,_incl._Cna_protein_B-type_domain,_and_Demethylmenaquinone_methyltransferase_activity

description:
  Mostly uncharacterized, incl. Cna protein B-type domain, and Demethylmenaquinone methyltransferase activity


id: CL:3867
description: Mostly uncharacterized, incl. SDR-like Ig domain, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3867_Mostly_uncharacterized,_incl._SDR-like_Ig_domain,_and_DNA_strand_exchange_activity


id: CL:3868
description: Mostly uncharacterized, incl. DNA strand exchange activity, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3868_Mostly_uncharacterized,_incl._DNA_strand_exchange_activity,_and_Armadillo-type_fold


id: CL:3869
description: Mixed, incl. DNA strand exchange activity, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3869_Mixed,_incl._DNA_strand_exchange_activity,_and_Armadillo-type_fold


id: CL:3872
description: DNA strand exchange activity, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3872_DNA_strand_exchange_activity,_and_Armadillo-type_fold


id: CL:3894
description: Mixed, incl. Response to nitrosative stress, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3894_Mixed,_incl._Response_to_nitrosative_stress,_and_Sequence-specific_DNA_binding


id: CL:3904
description: SDR-like Ig domain, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3904_SDR-like_Ig_domain,_and_Histone-like_DNA-binding_protein


id: CL:3920
description: Mixed, incl. Demethylmenaquinone methyltransferase activity, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3920_Mixed,_incl._Demethylmenaquinone_methyltransferase_activity,_and_Chromate_transport


id: CL:3921
description: Mixed, incl. Demethylmenaquinone methyltransferase activity, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3921_Mixed,_incl._Demethylmenaquinone_methyltransferase_activity,_and_Chromate_transport


id: CL:3924
description: Mixed, incl. Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3924_Mixed,_incl._Methyltransferase_domain


id: CL:3938
description: Mixed, incl. Chromate transport, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3938_Mixed,_incl._Chromate_transport,_and_Crp-like_helix-turn-helix_domain


id: CL:3953
description: Mixed, incl. Response to herbicide, and 6-phosphogluconate dehydrogenase, NADP-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3953_Mixed,_incl._Response_to_herbicide,_and_6-phosphogluconate_dehydrogenase,_NADP-binding


id: CL:3965
description: Mixed, incl. Transmembrane, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3965_Mixed,_incl._Transmembrane,_and_DNA_binding


id: CL:3966
description: Mostly uncharacterized, incl. Signal, and Peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3966_Mostly_uncharacterized,_incl._Signal,_and_Peptidase_activity


id: CL:3967
description: Mostly uncharacterized, incl. Signal, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3967_Mostly_uncharacterized,_incl._Signal,_and_Acyl-CoA_N-acyltransferase


id: CL:3968
description: Mostly uncharacterized, incl. Signal, and Cysteine-rich KTR
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3968_Mostly_uncharacterized,_incl._Signal,_and_Cysteine-rich_KTR


id: CL:3969
description: Mostly uncharacterized, incl. Cysteine-rich KTR, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3969_Mostly_uncharacterized,_incl._Cysteine-rich_KTR,_and_Transposase_activity


id: CL:3970
description: Mixed, incl. Cysteine-rich KTR, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3970_Mixed,_incl._Cysteine-rich_KTR,_and_Transposase_activity


id: CL:3973
description: Mixed, incl. Cysteine-rich KTR, and Lysozyme-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3973_Mixed,_incl._Cysteine-rich_KTR,_and_Lysozyme-like_domain_superfamily


id: CL:3975
description: Mixed, incl. Cysteine-rich KTR, and Lysozyme-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:3975_Mixed,_incl._Cysteine-rich_KTR,_and_Lysozyme-like_domain_superfamily


id: CL:4008
description: Mostly uncharacterized, incl. Peptidase M15B, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4008_Mostly_uncharacterized,_incl._Peptidase_M15B,_and_RNA_polymerase_sigma-70_like


id: CL:4010
description: Mixed, incl. Peptidase M15B, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4010_Mixed,_incl._Peptidase_M15B,_and_RNA_polymerase_sigma-70_like


id: CL:4034
description: Mostly uncharacterized, incl. Streptococcal pilin isopeptide linker, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4034_Mostly_uncharacterized,_incl._Streptococcal_pilin_isopeptide_linker,_and_Peptidase_S26


id: CL:4036
description: Mixed, incl. Streptococcal pilin isopeptide linker, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4036_Mixed,_incl._Streptococcal_pilin_isopeptide_linker,_and_Peptidase_S26


id: CL:4038
description: Streptococcal pilin isopeptide linker, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4038_Streptococcal_pilin_isopeptide_linker,_and_Peptidase_S26


id: CL:4058
description: Mixed, incl. Resolvase, N terminal domain, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4058_Mixed,_incl._Resolvase,_N_terminal_domain,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:4070
description: Mixed, incl. YcxB-like protein, and Hexapeptide transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4070_Mixed,_incl._YcxB-like_protein,_and_Hexapeptide_transferase,_conserved_site


id: CL:4092
description: Mixed, incl. BamE-like, and Flavodoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4092_Mixed,_incl._BamE-like,_and_Flavodoxin_domain


id: CL:4107
description: Mixed, incl. P-type ATPase, subfamily IB, and Ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4107_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Ion_transport


id: CL:4108
description: Mostly uncharacterized, incl. P-type ATPase, subfamily IB, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4108_Mostly_uncharacterized,_incl._P-type_ATPase,_subfamily_IB,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:4110
description: Mixed, incl. P-type ATPase, subfamily IB, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4110_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:4112
description: Mixed, incl. P-type ATPase, subfamily IB, and Copper ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4112_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Copper_ion_transport


id: CL:4115
description: Heavy-metal-associated domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4115_Heavy-metal-associated_domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:4138
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4138_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Flavodoxin


id: CL:4139
description: Mixed, incl. Flavodoxin, and Phosphoenolpyruvate carboxykinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4139_Mixed,_incl._Flavodoxin,_and_Phosphoenolpyruvate_carboxykinase_activity


id: CL:4148
description: Ferrous iron transporter FeoA domain, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4148_Ferrous_iron_transporter_FeoA_domain,_and_Iron_ion_transport


id: CL:4158
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4158_Mostly_uncharacterized,_incl._3-tRNA_processing_endoribonuclease_activity,_and_impB/mucB/samB_family

description:
  Mostly uncharacterized, incl. 3-tRNA processing endoribonuclease activity, and impB/mucB/samB family


id: CL:4159
description: Mixed, incl. 3-tRNA processing endoribonuclease activity, and Potassium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4159_Mixed,_incl._3-tRNA_processing_endoribonuclease_activity,_and_Potassium_ion_transmembrane_transport


id: CL:4160
description: 3-tRNA processing endoribonuclease activity, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4160_3-tRNA_processing_endoribonuclease_activity,_and_Membrane


id: CL:4169
description: Mixed, incl. Potassium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4169_Mixed,_incl._Potassium_ion_transmembrane_transport


id: CL:4178
description: Mixed, incl. impB/mucB/samB family, and Dihydrofolate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4178_Mixed,_incl._impB/mucB/samB_family,_and_Dihydrofolate_reductase_activity


id: CL:4191
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4191_Mostly_uncharacterized,_incl._Von_Willebrand_factor,_type_A,_and_Secondary_active_monocarboxylate_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Von Willebrand factor, type A, and Secondary active monocarboxylate transmembrane transporter activity


id: CL:4195
description: Mixed, incl. Von Willebrand factor, type A, and ATP hydrolysis activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4195_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_ATP_hydrolysis_activity


id: CL:4212
description: Mixed, incl. Peptidase activity, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4212_Mixed,_incl._Peptidase_activity,_and_GNAT_domain


id: CL:4213
description: Mostly uncharacterized, incl. Deubiquitinase activity, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4213_Mostly_uncharacterized,_incl._Deubiquitinase_activity,_and_GNAT_domain


id: CL:4214
description: Mostly uncharacterized, incl. Sulfate reduction, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4214_Mostly_uncharacterized,_incl._Sulfate_reduction,_and_GNAT_domain


id: CL:4216
description: Mixed, incl. Sulfate reduction, and Helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4216_Mixed,_incl._Sulfate_reduction,_and_Helix-turn-helix


id: CL:422
description: Mixed, incl. Thioesterase type II, NRPS/PKS/S-FAS, and Protein phosphopantetheinylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:422_Mixed,_incl._Thioesterase_type_II,_NRPS/PKS/S-FAS,_and_Protein_phosphopantetheinylation


id: CL:4220
description: Mixed, incl. Sulfate reduction, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4220_Mixed,_incl._Sulfate_reduction,_and_Protein_catabolic_process


id: CL:4246
description: Mixed, incl. 3-5 exonuclease, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4246_Mixed,_incl._3-5_exonuclease,_and_Sigma_factor_activity


id: CL:4257
description: Mixed, incl. Deubiquitinase activity, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4257_Mixed,_incl._Deubiquitinase_activity,_and_DNA_strand_exchange_activity


id: CL:4259
description: Mixed, incl. tRNA-specific adenosine deaminase activity, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4259_Mixed,_incl._tRNA-specific_adenosine_deaminase_activity,_and_Acetyltransferase_(GNAT)_family


id: CL:4275
description: Deubiquitinase activity, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4275_Deubiquitinase_activity,_and_DNA_strand_exchange_activity


id: CL:4290
description: Mixed, incl. CAAX-box protein processing, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4290_Mixed,_incl._CAAX-box_protein_processing,_and_BamE-like


id: CL:4292
description: Mixed, incl. BamE-like, and Nitroreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4292_Mixed,_incl._BamE-like,_and_Nitroreductase_family


id: CL:4311
description: Mixed, incl. DNA modification, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4311_Mixed,_incl._DNA_modification,_and_DNA_integration


id: CL:4312
description: Mixed, incl. DNA integration, and Endodeoxyribonuclease complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4312_Mixed,_incl._DNA_integration,_and_Endodeoxyribonuclease_complex


id: CL:4314
description: Endodeoxyribonuclease complex, and methylated-DNA-[protein]-cysteine S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4314_Endodeoxyribonuclease_complex,_and_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: CL:4331
description: Mixed, incl. tRNA endonuclease-like domain superfamily, and Nitroreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4331_Mixed,_incl._tRNA_endonuclease-like_domain_superfamily,_and_Nitroreductase_family


id: CL:4343
description: Mixed, incl. Alanine transport, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4343_Mixed,_incl._Alanine_transport,_and_RNA_polymerase_sigma-70_like


id: CL:4352
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4352_Mostly_uncharacterized,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_Excinuclease_ABC_activity

description:
  Mostly uncharacterized, incl. Von Willebrand factor A-like domain superfamily, and Excinuclease ABC activity


id: CL:4354
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and Disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4354_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_Disulfide_oxidoreductase_activity


id: CL:4364
description: Mixed, incl. Excinuclease ABC activity, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4364_Mixed,_incl._Excinuclease_ABC_activity,_and_Acetyltransferase_(GNAT)_domain


id: CL:4375
description: Mostly uncharacterized, incl. Metal ion transport, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4375_Mostly_uncharacterized,_incl._Metal_ion_transport,_and_N-acetyltransferase_activity


id: CL:4376
description: Mostly uncharacterized, incl. Potassium ion transport, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4376_Mostly_uncharacterized,_incl._Potassium_ion_transport,_and_N-acetyltransferase_activity


id: CL:4377
description: Mostly uncharacterized, incl. Potassium ion transport, and Threonine/Serine exporter, ThrE
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4377_Mostly_uncharacterized,_incl._Potassium_ion_transport,_and_Threonine/Serine_exporter,_ThrE


id: CL:4379
description: Mixed, incl. Potassium ion transport, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4379_Mixed,_incl._Potassium_ion_transport,_and_GNAT_domain


id: CL:4380
description: Mixed, incl. Potassium ion transport, and YjjU-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4380_Mixed,_incl._Potassium_ion_transport,_and_YjjU-like


id: CL:4382
description: Potassium ion transport, and YjjU-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4382_Potassium_ion_transport,_and_YjjU-like


id: CL:440
description: Fatty acid metabolism, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:440_Fatty_acid_metabolism,_and_Fatty_acid_synthase_activity


id: CL:4403
description: Mixed, incl. Response to herbicide, and Putative TM nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4403_Mixed,_incl._Response_to_herbicide,_and_Putative_TM_nitroreductase


id: CL:4414
description: Mixed, incl. Threonine/Serine exporter, ThrE, and Lysine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4414_Mixed,_incl._Threonine/Serine_exporter,_ThrE,_and_Lysine_degradation


id: CL:4416
description: Threonine/Serine exporter, ThrE, and Lysine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4416_Threonine/Serine_exporter,_ThrE,_and_Lysine_degradation


id: CL:4441
description: Mixed, incl. Type II CAAX prenyl endopeptidase Rce1-like, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4441_Mixed,_incl._Type_II_CAAX_prenyl_endopeptidase_Rce1-like,_and_Primosome_complex


id: CL:4457
description: Mixed, incl. YgjP-like, metallopeptidase domain, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4457_Mixed,_incl._YgjP-like,_metallopeptidase_domain,_and_Transmembrane_protein_TMEM64


id: CL:4458
description: Mixed, incl. Transmembrane protein TMEM64, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4458_Mixed,_incl._Transmembrane_protein_TMEM64,_and_Transition_metal_ion_transport


id: CL:4467
description: YgjP-like, metallopeptidase domain, and Protein of unknown function DUF1097
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4467_YgjP-like,_metallopeptidase_domain,_and_Protein_of_unknown_function_DUF1097


id: CL:4476
description: Mixed, incl. Pantothenate biosynthesis, and Pyridoxal phosphate-dependent transferase, small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4476_Mixed,_incl._Pantothenate_biosynthesis,_and_Pyridoxal_phosphate-dependent_transferase,_small_domain


id: CL:4477
description: Mixed, incl. Pantothenate biosynthesis, and Pyridoxal phosphate-dependent transferase, small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4477_Mixed,_incl._Pantothenate_biosynthesis,_and_Pyridoxal_phosphate-dependent_transferase,_small_domain


id: CL:4478
description: Mixed, incl. Pantothenate biosynthesis, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4478_Mixed,_incl._Pantothenate_biosynthesis,_and_Transsulfuration


id: CL:4480
description: Pantothenate biosynthesis, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4480_Pantothenate_biosynthesis,_and_Transsulfuration


id: CL:4494
description: Mixed, incl. ECF-type riboflavin transporter, S component
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4494_Mixed,_incl._ECF-type_riboflavin_transporter,_S_component


id: CL:4504
description: Mixed, incl. Selenocompound metabolism, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4504_Mixed,_incl._Selenocompound_metabolism,_and_Coenzyme_F420_binding


id: CL:4525
description: Mixed, incl. Putative C-S lyase, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4525_Mixed,_incl._Putative_C-S_lyase,_and_Transcription_regulator_Rrf2


id: CL:4541
description: Mixed, incl. Fermentation, and Phosphate-starvation-inducible E family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4541_Mixed,_incl._Fermentation,_and_Phosphate-starvation-inducible_E_family


id: CL:4543
description: Mixed, incl. Fermentation, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4543_Mixed,_incl._Fermentation,_and_LysR,_substrate-binding


id: CL:4555
description: Fermentation, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4555_Fermentation,_and_Sodium/solute_symporter


id: CL:4582
description: Mixed, incl. Sodium:neurotransmitter symporter, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4582_Mixed,_incl._Sodium:neurotransmitter_symporter,_and_DNA_dealkylation


id: CL:4584
description: Uncharacterized sodium-dependent transporter YocR/YhdH-like, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4584_Uncharacterized_sodium-dependent_transporter_YocR/YhdH-like,_and_DNA_dealkylation


id: CL:4604
description: Transposase IS200-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4604_Transposase_IS200-like_superfamily


id: CL:4622
description: Mixed, incl. Response to virus, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4622_Mixed,_incl._Response_to_virus,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4623
description: Response to virus, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4623_Response_to_virus,_and_Peptidyl-serine_acetylation


id: CL:4624
description: Response to virus, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4624_Response_to_virus,_and_Peptidyl-serine_acetylation


id: CL:4625
description: Mixed, incl. Maintenance of DNA repeat elements, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4625_Mixed,_incl._Maintenance_of_DNA_repeat_elements,_and_Peptidyl-serine_acetylation


id: CL:4626
description: Maintenance of DNA repeat elements, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4626_Maintenance_of_DNA_repeat_elements,_and_Helicase/UvrB,_N-terminal


id: CL:4639
description: Mixed, incl. Peptidyl-serine acetylation, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4639_Mixed,_incl._Peptidyl-serine_acetylation,_and_KR_domain


id: CL:4653
description: RAMP superfamily, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4653_RAMP_superfamily,_and_GGDEF_domain


id: CL:467
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:467_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Dioxygenase


id: CL:4672
description: CRISPR-associated endonuclease Cas9, and Antiviral defense
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4672_CRISPR-associated_endonuclease_Cas9,_and_Antiviral_defense


id: CL:4684
description: DDE transposase retroviral integrase sub-family, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4684_DDE_transposase_retroviral_integrase_sub-family,_and_Helix-turn-helix_domain


id: CL:4697
description: Mostly uncharacterized, incl. DNA integration, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4697_Mostly_uncharacterized,_incl._DNA_integration,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4698
description: Mostly uncharacterized, incl. Lectin, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4698_Mostly_uncharacterized,_incl._Lectin,_and_Host_cell


id: CL:4699
description: Mostly uncharacterized, incl. Lectin, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4699_Mostly_uncharacterized,_incl._Lectin,_and_Host_cell


id: CL:4700
description: Mostly uncharacterized, incl. Host cell, and Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4700_Mostly_uncharacterized,_incl._Host_cell,_and_Xylene_degradation


id: CL:4714
description: Mixed, incl. Xylene degradation, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4714_Mixed,_incl._Xylene_degradation,_and_HNH_nuclease


id: CL:4725
description: Mixed, incl. Lectin, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4725_Mixed,_incl._Lectin,_and_Coiled_coil


id: CL:4738
description: Mostly uncharacterized, incl. Uncharacterized protein RP532
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4738_Mostly_uncharacterized,_incl._Uncharacterized_protein_RP532


id: CL:4749
description: Mixed, incl. Abi-like protein, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4749_Mixed,_incl._Abi-like_protein,_and_Pfam_phage_integrase_family


id: CL:4780
description: Mostly uncharacterized, incl. Flavodoxin, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4780_Mostly_uncharacterized,_incl._Flavodoxin,_and_Radical_SAM_superfamily


id: CL:4781
description: Mixed, incl. Flavodoxin, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4781_Mixed,_incl._Flavodoxin,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:4782
description: Mixed, incl. UDP-N-acetylglucosamine metabolic process, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4782_Mixed,_incl._UDP-N-acetylglucosamine_metabolic_process,_and_EamA_domain


id: CL:4813
description: Mostly uncharacterized, incl. Lipoprotein metabolic process, and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4813_Mostly_uncharacterized,_incl._Lipoprotein_metabolic_process,_and_B12_binding_domain


id: CL:482
description: Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:482_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:4828
description: Mixed, incl. Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4828_Mixed,_incl._Lipoprotein_metabolic_process


id: CL:4844
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4844_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_Uncharacterized_protein_RP532

description:
  Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and Uncharacterized protein RP532


id: CL:4847
description: Mixed, incl. 3-5-exoribonuclease activity, and Lipid A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4847_Mixed,_incl._3-5-exoribonuclease_activity,_and_Lipid_A_metabolic_process


id: CL:4923
description: Mostly uncharacterized, incl. Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:4923_Mostly_uncharacterized,_incl._Coiled_coil


id: CL:496
description: Mixed, incl. CoA-ligase activity, and AMP-binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:496_Mixed,_incl._CoA-ligase_activity,_and_AMP-binding,_conserved_site


id: CL:512
description: Mixed, incl. Biotin metabolic process, and BioY family
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:512_Mixed,_incl._Biotin_metabolic_process,_and_BioY_family


id: CL:513
description: Mixed, incl. Biotin metabolic process, and Biotin-protein ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:513_Mixed,_incl._Biotin_metabolic_process,_and_Biotin-protein_ligase_activity


id: CL:529
description: Biotin-protein ligase activity, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:529_Biotin-protein_ligase_activity,_and_Biotin-binding_site


id: CL:540
description: Mixed, incl. Toxin metabolic process, and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:540_Mixed,_incl._Toxin_metabolic_process,_and_Acyl_carrier_protein_(ACP)


id: CL:555
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:555_Cellular_amino_acid_biosynthetic_process,_and_Nucleobase-containing_small_molecule_metabolic_process

description:
  Cellular amino acid biosynthetic process, and Nucleobase-containing small molecule metabolic process


id: CL:556
description: Amino-acid biosynthesis, and Nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:556_Amino-acid_biosynthesis,_and_Nucleoside_monophosphate_biosynthetic_process


id: CL:557
description: Amino-acid biosynthesis, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:557_Amino-acid_biosynthesis,_and_Cysteine_and_methionine_metabolism


id: CL:558
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:558_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_metabolic_process


id: CL:559
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:559_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_metabolic_process


id: CL:560
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:560_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:583
description: Tryptophan biosynthesis, and Peptidase C26
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:583_Tryptophan_biosynthesis,_and_Peptidase_C26


id: CL:637
description: Aspartate family amino acid biosynthetic process, and Cysteine biosynthetic process from serine
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:637_Aspartate_family_amino_acid_biosynthetic_process,_and_Cysteine_biosynthetic_process_from_serine


id: CL:638
description: Lysine metabolic process, and Serine O-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:638_Lysine_metabolic_process,_and_Serine_O-acyltransferase_activity


id: CL:640
description: Diaminopimelate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:640_Diaminopimelate_biosynthetic_process


id: CL:661
description: Sulfur amino acid metabolic process, and Amino acid kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:661_Sulfur_amino_acid_metabolic_process,_and_Amino_acid_kinase_activity


id: CL:662
description: Threonine biosynthesis, and Cysteine biosynthetic process from serine
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:662_Threonine_biosynthesis,_and_Cysteine_biosynthetic_process_from_serine


id: CL:673
description: Homoserine metabolic process, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:673_Homoserine_metabolic_process,_and_Methionine_synthase_activity


id: CL:682
description: Mixed, incl. Nucleoside monophosphate biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:682_Mixed,_incl._Nucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:683
description: Ribonucleoside monophosphate metabolic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:683_Ribonucleoside_monophosphate_metabolic_process,_and_One-carbon_metabolic_process


id: CL:684
description: Purine biosynthesis, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:684_Purine_biosynthesis,_and_One-carbon_metabolic_process


id: CL:686
description: Purine nucleoside monophosphate biosynthetic process, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:686_Purine_nucleoside_monophosphate_biosynthetic_process,_and_Nucleotidase_activity


id: CL:709
description: GMP biosynthetic process, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:709_GMP_biosynthetic_process,_and_Nucleotidase_activity


id: CL:738
description: De novo UMP biosynthetic process, and Allantoin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:738_De_novo_UMP_biosynthetic_process,_and_Allantoin_catabolic_process


id: CL:740
description: De novo pyrimidine nucleobase biosynthetic process, and MGS-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:740_De_novo_pyrimidine_nucleobase_biosynthetic_process,_and_MGS-like_domain


id: CL:75
description: Mixed, incl. Carbon metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:75_Mixed,_incl._Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:756
description: Allantoin catabolic process, and Dihydroprymidine dehydrogenase domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:756_Allantoin_catabolic_process,_and_Dihydroprymidine_dehydrogenase_domain_II


id: CL:76
description: Mixed, incl. Carbon metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:76_Mixed,_incl._Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:771
description: Mixed, incl. Deoxyribonucleoside triphosphate metabolic process, and Cobalamin
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:771_Mixed,_incl._Deoxyribonucleoside_triphosphate_metabolic_process,_and_Cobalamin


id: CL:773
description: Deoxyribonucleoside monophosphate biosynthetic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:773_Deoxyribonucleoside_monophosphate_biosynthetic_process,_and_Flavoprotein


id: CL:78
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:78_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:785
description: Mixed, incl. Cobalamin, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:785_Mixed,_incl._Cobalamin,_and_AMP_salvage


id: CL:795
description: Mixed, incl. Riboflavin metabolic process, and Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:795_Mixed,_incl._Riboflavin_metabolic_process,_and_Pyridine_nucleotide_metabolic_process


id: CL:796
description: Mixed, incl. Pyridine nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:796_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:798
description: Mixed, incl. Pyridine nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:798_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:799
description: Mixed, incl. Pyridine nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:799_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:80
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:80_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:802
description: Nicotinamide nucleotide metabolic process, and Protein deacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:802_Nicotinamide_nucleotide_metabolic_process,_and_Protein_deacylation


id: CL:81
description: Mixed, incl. Citrate cycle (TCA cycle), and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:81_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Thiamin_diphosphate-binding_fold


id: CL:82
description: Citrate cycle (TCA cycle), and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:82_Citrate_cycle_(TCA_cycle),_and_Thiamin_diphosphate-binding_fold


id: CL:822
description: Quinolinate metabolic process, and Nickel
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:822_Quinolinate_metabolic_process,_and_Nickel


id: CL:83
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:83_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_Pyruvate_ferredoxin/flavodoxin_oxidoreductase

description:
  4Fe-4S ferredoxin-type, iron-sulphur binding domain, and Pyruvate ferredoxin/flavodoxin oxidoreductase


id: CL:840
description: Riboflavin metabolic process, and HAD hydrolase, subfamily IA
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:840_Riboflavin_metabolic_process,_and_HAD_hydrolase,_subfamily_IA


id: CL:842
description: Riboflavin biosynthesis, and Sucrose-6F-phosphate phosphohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:842_Riboflavin_biosynthesis,_and_Sucrose-6F-phosphate_phosphohydrolase


id: CL:86
description: Pyruvate:ferredoxin oxidoreductase core domain II, and Dicarboxylic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:86_Pyruvate:ferredoxin_oxidoreductase_core_domain_II,_and_Dicarboxylic_acid_catabolic_process


id: CL:873
description: Mixed, incl. Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:873_Mixed,_incl._Translation,_and_ATP-dependent_activity


id: CL:874
description: Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:874_Translation,_and_ATP-dependent_activity


id: CL:877
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:877_Translation,_and_Protein_transport


id: CL:878
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:878_Translation,_and_Protein_transport


id: CL:879
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:879_Translation,_and_Protein_transport


id: CL:883
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:883_Ribosome,_and_Regulation_of_translation


id: CL:885
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:885_Ribosome,_and_Regulation_of_translation


id: CL:890
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:890_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:893
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:893_Structural_constituent_of_ribosome


id: CL:896
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:896_Structural_constituent_of_ribosome


id: CL:898
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:898_Structural_constituent_of_ribosome


id: CL:903
description: Large ribosomal subunit, and Ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:903_Large_ribosomal_subunit,_and_Ribosome


id: CL:904
description: Mixed, incl. Large ribosomal subunit, and Ribosomal protein L2, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:904_Mixed,_incl._Large_ribosomal_subunit,_and_Ribosomal_protein_L2,_domain_2


id: CL:905
description: Mixed, incl. Large ribosomal subunit rRNA binding, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:905_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_Large_ribosomal_subunit


id: CL:914
description: Ribosomal protein L2, domain 2, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:914_Ribosomal_protein_L2,_domain_2,_and_Large_ribosomal_subunit


id: CL:923
description: Mixed, incl. Large ribosomal subunit, and Nucleotide-binding alpha-beta plait domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:923_Mixed,_incl._Large_ribosomal_subunit,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily


id: CL:934
description: rRNA-binding, and 50S ribosomal protein L30e-like
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:934_rRNA-binding,_and_50S_ribosomal_protein_L30e-like


id: CL:935
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:935_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:950
description: Mixed, incl. 50S ribosomal protein L30e-like, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:950_Mixed,_incl._50S_ribosomal_protein_L30e-like,_and_Initiation_factor


id: CL:970
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:970_Structural_constituent_of_ribosome


id: CL:971
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:971_Structural_constituent_of_ribosome


id: CL:973
description: Translation protein SH3-like domain superfamily, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:973_Translation_protein_SH3-like_domain_superfamily,_and_Structural_constituent_of_ribosome


id: CL:993
description: L28p-like, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_887929_STRINGid_CL:993_L28p-like,_and_Structural_constituent_of_ribosome


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 5
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016862
description: Intramolecular oxidoreductase activity, interconverting keto- and enol-groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016862
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016862_Intramolecular_oxidoreductase_activity,_interconverting_keto-_and_enol-groups


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019379
memo: https://amigo.geneontology.org/amigo/term/GO:0019379
golevel: 5
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0019379_Sulfate_assimilation,_phosphoadenylyl_sulfate_reduction_by_phosphoadenylyl-sulfate_reductase_(thioredoxin)

description:
  Sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0022877
description: protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022877
golevel: 8
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0022877_protein-N(PI)-phosphohistidine-fructose_phosphotransferase_system_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_887929_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_887929_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_887929_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043715
description: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043715
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0043715_2,3-diketo-5-methylthiopentyl-1-phosphate_enolase_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044011
description: Single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:0044011
golevel: 7
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0044011_Single-species_biofilm_formation_on_inanimate_substrate


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_887929_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_887929_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047324
description: Phosphoenolpyruvate-glycerone phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047324
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0047324_Phosphoenolpyruvate-glycerone_phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_887929_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0098742
description: Cell-cell adhesion via plasma-membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0098742
golevel: 4
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0098742_Cell-cell_adhesion_via_plasma-membrane_adhesion_molecules


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_887929_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_887929_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000172
description: Ribonuclease MRP complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000172
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000172_Ribonuclease_MRP_complex


id: GOCC:0000178
description: Exosome (RNase complex)
memo: https://amigo.geneontology.org/amigo/term/GO:0000178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000178_Exosome_(RNase_complex)


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005732
description: Small nucleolar ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005732
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005732_Small_nucleolar_ribonucleoprotein_complex


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005741
description: Mitochondrial outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005741
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005741_Mitochondrial_outer_membrane


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005791
description: Rough endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005791
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005791_Rough_endoplasmic_reticulum


id: GOCC:0005793
description: Endoplasmic reticulum-Golgi intermediate compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0005793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005793_Endoplasmic_reticulum-Golgi_intermediate_compartment


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009350
description: Ethanolamine ammonia-lyase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009350
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009350_Ethanolamine_ammonia-lyase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009505_Plant-type_cell_wall


id: GOCC:0009538
description: Photosystem I reaction center
memo: https://amigo.geneontology.org/amigo/term/GO:0009538
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009538_Photosystem_I_reaction_center


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009654
description: Photosystem II oxygen evolving complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009654
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009654_Photosystem_II_oxygen_evolving_complex


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015629
description: Actin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015629
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0015629_Actin_cytoskeleton


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0016471
description: Vacuolar proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0016471_Vacuolar_proton-transporting_V-type_ATPase_complex


id: GOCC:0016610
description: Nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016610
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0016610_Nitrogenase_complex


id: GOCC:0016612
description: Molybdenum-iron nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016612
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0016612_Molybdenum-iron_nitrogenase_complex


id: GOCC:0017122
description: Protein N-acetylglucosaminyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017122
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0017122_Protein_N-acetylglucosaminyltransferase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019812
description: Type I site-specific deoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019812
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0019812_Type_I_site-specific_deoxyribonuclease_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030075
description: Bacterial thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0030075
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030075_Bacterial_thylakoid


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030137
description: COPI-coated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030137
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030137_COPI-coated_vesicle


id: GOCC:0030256
description: Type I protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030256
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030256_Type_I_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030663
description: COPI-coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030663
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030663_COPI-coated_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031300
description: Intrinsic component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031300_Intrinsic_component_of_organelle_membrane


id: GOCC:0031301
description: Integral component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031301
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031301_Integral_component_of_organelle_membrane


id: GOCC:0031304
description: Intrinsic component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031304
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031304_Intrinsic_component_of_mitochondrial_inner_membrane


id: GOCC:0031305
description: Integral component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031305
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031305_Integral_component_of_mitochondrial_inner_membrane


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031471
description: Ethanolamine degradation polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031471_Ethanolamine_degradation_polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031588
description: Nucleotide-activated protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031588_Nucleotide-activated_protein_kinase_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031901
description: Early endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031901
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031901_Early_endosome_membrane


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031968
description: Organelle outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031968
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031968_Organelle_outer_membrane


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032592
description: Integral component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0032592
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0032592_Integral_component_of_mitochondrial_membrane


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033176
description: Proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0033176_Proton-transporting_V-type_ATPase_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033179
description: Proton-transporting V-type ATPase, V0 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033179
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0033179_Proton-transporting_V-type_ATPase,_V0_domain


id: GOCC:0033180
description: Proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033180
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0033180_Proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0036125
description: Fatty acid beta-oxidation multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0036125
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0036125_Fatty_acid_beta-oxidation_multienzyme_complex


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042601
description: Endospore-forming forespore
memo: https://amigo.geneontology.org/amigo/term/GO:0042601
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0042601_Endospore-forming_forespore


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042717
description: Plasma membrane-derived chromatophore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042717
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0042717_Plasma_membrane-derived_chromatophore_membrane


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045254
description: Pyruvate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045254
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0045254_Pyruvate_dehydrogenase_complex


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045335
description: Phagocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0045335
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0045335_Phagocytic_vesicle


id: GOCC:0046658
description: Anchored component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0046658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0046658_Anchored_component_of_plasma_membrane


id: GOCC:0046821
description: Extrachromosomal DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0046821
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0046821_Extrachromosomal_DNA


id: GOCC:0048471
description: Perinuclear region of cytoplasm
memo: https://amigo.geneontology.org/amigo/term/GO:0048471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0048471_Perinuclear_region_of_cytoplasm


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0061672
description: Glutathione hydrolase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0061672
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0061672_Glutathione_hydrolase_complex


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0071513
description: Phosphopantothenoylcysteine decarboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0071513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0071513_Phosphopantothenoylcysteine_decarboxylase_complex


id: GOCC:0090734
description: Site of DNA damage
memo: https://amigo.geneontology.org/amigo/term/GO:0090734
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0090734_Site_of_DNA_damage


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098573
description: Intrinsic component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098573_Intrinsic_component_of_mitochondrial_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098687
description: Chromosomal region
memo: https://amigo.geneontology.org/amigo/term/GO:0098687
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098687_Chromosomal_region


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098857
description: Membrane microdomain
memo: https://amigo.geneontology.org/amigo/term/GO:0098857
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0098857_Membrane_microdomain


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099512
description: Supramolecular fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099512
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0099512_Supramolecular_fiber


id: GOCC:0099513
description: Polymeric cytoskeletal fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0099513_Polymeric_cytoskeletal_fiber


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902503
description: Adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1902503_Adenylyltransferase_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1902911
description: Protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1902911_Protein_kinase_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1903600
description: Glutaminase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1903600
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1903600_Glutaminase_complex


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905354
description: Exoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905354
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1905354_Exoribonuclease_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1990065
description: Dxr protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990065
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990065_Dxr_protein_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990220
description: GroEL-GroES complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990220
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990220_GroEL-GroES_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_887929_STRINGid_GOCC:1990351_Transporter_complex


