# geneInfo

ensembl_gene_id: GEAM_2718
symbol: GEAM_2718
gene_biotype: protein_coding
description:
  Putative methylated-DNA-[protein]-cysteine methyltransferase; Protein involved in catalytic activity and DNA repair.


ensembl_gene_id: GEAM_2720
symbol: tesB
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase II; Protein involved in acyl-CoA hydrolase activity and acyl-CoA metabolic process.


ensembl_gene_id: GEAM_2721
symbol: amtB
gene_biotype: protein_coding
description:
  Protein involved in ammonium transmembrane transporter activity, ammonium transport and ammonium transmembrane transport.


ensembl_gene_id: GEAM_2722
symbol: GlnK
gene_biotype: protein_coding
description:
  GlnK family nitrogen regulatory protein P-II; Protein involved in enzyme regulator activity and regulation of nitrogen utilization; Belongs to the P(II) protein family.


ensembl_gene_id: GEAM_2723
symbol: GEAM_2723
gene_biotype: protein_coding
description:
  Multidrug resistance-like ATP-binding protein; Protein involved in ATPase activity, ATP binding, ATPase activity, coupled to transmembrane movement of substances, nucleotide binding, nucleoside-triphosphatase activity, biological_process, transport and transmembrane transport.


ensembl_gene_id: GEAM_2725
symbol: GEAM_2725
gene_biotype: protein_coding
description:
  Putative HTH-type transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2728
symbol: cof
gene_biotype: protein_coding
description:
  Pyridoxal phosphatase; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P).


ensembl_gene_id: GEAM_2730
symbol: queC
gene_biotype: protein_coding
description:
  Queuosine biosynthesis ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: GEAM_2733
symbol: PpiD
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; Protein involved in isomerase activity, protein folding and protein transport.


ensembl_gene_id: GEAM_2734
symbol: HupB
gene_biotype: protein_coding
description:
  HU-beta family DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: GEAM_2735
symbol: lon
gene_biotype: protein_coding
description:
  La type I ATP-dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: GEAM_2736
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: GEAM_2738
symbol: tig
gene_biotype: protein_coding
description:
  Cell division trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: GEAM_2742
symbol: cyoA
gene_biotype: protein_coding
description:
  Protein involved in cytochrome o ubiquinol oxidase activity, cytochrome-c oxidase activity, copper ion binding, oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor, heme binding, electron transport coupled proton transport, electron transport chain, oxidation-reduction process and respiratory electron transport chain.


ensembl_gene_id: GEAM_2743
symbol: cyoB
gene_biotype: protein_coding
description:
  Protein involved in heme binding, cytochrome-c oxidase activity, electron carrier activity, iron ion binding, oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor, electron transport coupled proton transport, aerobic respiration and oxidation-reduction process; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: GEAM_2744
symbol: cyoC
gene_biotype: protein_coding
description:
  Protein involved in heme-copper terminal oxidase activity, cytochrome o ubiquinol oxidase activity, electron transport coupled proton transport and aerobic electron transport chain.


ensembl_gene_id: GEAM_2745
symbol: cyoD
gene_biotype: protein_coding
description:
  Protein involved in cytochrome o ubiquinol oxidase activity and electron transport coupled proton transport.


ensembl_gene_id: GEAM_2746
symbol: cyoE
gene_biotype: protein_coding
description:
  Heme O synthase/protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: GEAM_2751
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA thiouridine synthase/thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: GEAM_2752
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: GEAM_2753
symbol: IspA
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; Protein involved in isoprenoid biosynthetic process; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: GEAM_2754
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: GEAM_2756
symbol: PgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: GEAM_2757
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: GEAM_2758
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription termination protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: GEAM_2759
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: GEAM_2760
symbol: ribD
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: GEAM_2761
symbol: nrdR
gene_biotype: protein_coding
description:
  Ribonucleotide reductase transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: GEAM_2763
symbol: secF
gene_biotype: protein_coding
description:
  SecF family protein-export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: GEAM_2764
symbol: secD
gene_biotype: protein_coding
description:
  SecD family protein-export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: GEAM_2765
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: GEAM_2766
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: GEAM_2767
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: GEAM_2768
symbol: GEAM_2768
gene_biotype: protein_coding
description:
  Protein involved in [acyl-carrier-protein] phosphodiesterase activity and fatty acid biosynthetic process.


ensembl_gene_id: GEAM_2769
symbol: GEAM_2769
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Protein involved in peroxiredoxin activity, oxidoreductase activity, antioxidant activity and oxidation-reduction process.


ensembl_gene_id: GEAM_2770
symbol: Ggt
gene_biotype: protein_coding
description:
  Gamma-glutamyltranspeptidase; Protein involved in gamma-glutamyltransferase activity, glutathione biosynthetic process and glutathione metabolic process.


ensembl_gene_id: GEAM_2771
symbol: ProY
gene_biotype: protein_coding
description:
  Proline-specific permease; Protein involved in amino acid transmembrane transporter activity, biological_process, transport, transmembrane transport and amino acid transmembrane transport.


ensembl_gene_id: GEAM_2772
symbol: brnQ
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: GEAM_2773
symbol: phoR
gene_biotype: protein_coding
description:
  Phosphate regulon sensor protein; Protein involved in ATP binding, protein histidine kinase activity, phosphorelay sensor kinase activity, signal transducer activity, phosphorelay signal transduction system, phosphate-containing compound metabolic process, phosphate ion transport, regulation of transcription, DNA-templated and signal transduction.


ensembl_gene_id: GEAM_2774
symbol: phoB
gene_biotype: protein_coding
description:
  Phosphate regulon transcriptional regulatory protein; Protein involved in phosphorelay response regulator activity, DNA binding, phosphorelay signal transduction system, regulation of transcription, DNA-templated, phosphate-containing compound metabolic process and phosphate ion transport.


ensembl_gene_id: GEAM_2775
symbol: sbcD
gene_biotype: protein_coding
description:
  SbcD family exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: GEAM_2776
symbol: sbcC
gene_biotype: protein_coding
description:
  SbcC family exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily.


ensembl_gene_id: GEAM_2778
symbol: GEAM_2778
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily nitrate/sulfonate/bicarbonate transporter; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_2779
symbol: GEAM_2779
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate import ATP-binding protein; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_2781
symbol: GEAM_2781
gene_biotype: protein_coding
description:
  Aminoglycoside phosphotransferase; Protein involved in transferase activity, transferring phosphorus-containing groups.


ensembl_gene_id: GEAM_2782
symbol: GEAM_2782
gene_biotype: protein_coding
description:
  Putative aminotransferase; Protein involved in pyridoxal phosphate binding and transaminase activity; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: GEAM_2783
symbol: eat
gene_biotype: protein_coding
description:
  Ethanolamine permease; Protein involved in amino acid transmembrane transporter activity, biological_process and amino acid transmembrane transport.


ensembl_gene_id: GEAM_2785
symbol: rdgC
gene_biotype: protein_coding
description:
  DNA recombination-dependent growth factor C; May be involved in recombination; Belongs to the RdgC family.


ensembl_gene_id: GEAM_2786
symbol: ppnP
gene_biotype: protein_coding
description:
  YaiE family cytoplasmic protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: GEAM_2793
symbol: aroL
gene_biotype: protein_coding
description:
  Shikimate kinase III; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.


ensembl_gene_id: GEAM_2804
symbol: pagP
gene_biotype: protein_coding
description:
  Lipid A palmitoyltransferase; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: GEAM_2805
symbol: purL
gene_biotype: protein_coding
description:
  Glutamine amidotransferase subunit of phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: GEAM_2806
symbol: mltF
gene_biotype: protein_coding
description:
  Slt family transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: GEAM_2807
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: GEAM_2808
symbol: GEAM_2808
gene_biotype: protein_coding
description:
  L-fucose mutarotase; Protein involved in monosaccharide binding, isomerase activity and monosaccharide metabolic process.


ensembl_gene_id: GEAM_2811
symbol: GEAM_2811
gene_biotype: protein_coding
description:
  Ribose operon repressor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2813
symbol: GEAM_2813
gene_biotype: protein_coding
description:
  PTS system N-acetylmuramic acid-specific IIBC components; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, sugar:hydrogen symporter activity, biological_process, phosphoenolpyruvate-dependent sugar phosphotransferase system and transport.


ensembl_gene_id: GEAM_2814
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.


ensembl_gene_id: GEAM_2815
symbol: GEAM_2815
gene_biotype: protein_coding
description:
  RpiR family transcriptional regulator; Protein involved in carbohydrate binding, sequence-specific DNA binding transcription factor activity, DNA binding, carbohydrate metabolic process and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2817
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: GEAM_2818
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: GEAM_2820
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: GEAM_2821
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: GEAM_2822
symbol: lepB
gene_biotype: protein_coding
description:
  Signal peptidase I; Protein involved in serine-type peptidase activity, signal peptide processing, protein secretion and proteolysis; Belongs to the peptidase S26 family.


ensembl_gene_id: GEAM_2823
symbol: lepA
gene_biotype: protein_coding
description:
  Translation elongation factor; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: GEAM_2827
symbol: RseA
gene_biotype: protein_coding
description:
  Sigma factor negative regulatory protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic pro [...]


ensembl_gene_id: GEAM_2830
symbol: GEAM_2830
gene_biotype: protein_coding
description:
  Putative O-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: GEAM_2831
symbol: srmB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.


ensembl_gene_id: GEAM_2832
symbol: grcA
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase; Acts as a radical domain for damaged PFL and possibly other radical proteins.


ensembl_gene_id: GEAM_2833
symbol: ung
gene_biotype: protein_coding
description:
  Family 1 uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: GEAM_2834
symbol: grpE
gene_biotype: protein_coding
description:
  GrpE family heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds  [...]


ensembl_gene_id: GEAM_2835
symbol: nadK
gene_biotype: protein_coding
description:
  NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: GEAM_2837
symbol: bamE
gene_biotype: protein_coding
description:
  SmpA family component of an outer-membrane protein assembly complex; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: GEAM_2840
symbol: smpB
gene_biotype: protein_coding
description:
  tmRNA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches t [...]


ensembl_gene_id: GEAM_2850
symbol: GEAM_2850
gene_biotype: protein_coding
description:
  GCN5 family N-acetyltransferase; Protein involved in N-acetyltransferase activity and biological_process.


ensembl_gene_id: GEAM_2852
symbol: Ada
gene_biotype: protein_coding
description:
  Ada family regulatory protein/methylated-DNA--protein-cysteine methyltransferase; Protein involved in catalytic activity, sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, methylated-DNA-[protein]-cysteine S-methyltransferase activity, DNA binding, zinc ion binding, methyltransferase activity, DNA repair and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2854
symbol: GEAM_2854
gene_biotype: protein_coding
description:
  M20 family peptidase; Protein involved in hydrolase activity and metabolic process; Belongs to the peptidase M20A family.


ensembl_gene_id: GEAM_2860
symbol: GEAM_2860
gene_biotype: protein_coding
description:
  Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2865
symbol: GEAM_2865
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: GEAM_2866
symbol: nrdH
gene_biotype: protein_coding
description:
  Protein involved in protein disulfide oxidoreductase activity, electron carrier activity and cell redox homeostasis.


ensembl_gene_id: GEAM_2867
symbol: nrdI
gene_biotype: protein_coding
description:
  NrdI family ribonucleotide reduction protein; Probably involved in ribonucleotide reductase function.


ensembl_gene_id: GEAM_2868
symbol: NrdE
gene_biotype: protein_coding
description:
  Class Ib ribonucleotide reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: GEAM_2869
symbol: NrdF
gene_biotype: protein_coding
description:
  Class Ib ribonucleotide reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: GEAM_2870
symbol: GEAM_2870
gene_biotype: protein_coding
description:
  ABC1 family protein; Protein involved in transferase activity, transferring phosphorus-containing groups and biological_process.


ensembl_gene_id: GEAM_2871
symbol: GEAM_2871
gene_biotype: protein_coding
description:
  Malate Na(+) symporter; Protein involved in organic anion transmembrane transporter activity, biological_process and organic anion transport.


ensembl_gene_id: GEAM_2872
symbol: GEAM_2872
gene_biotype: protein_coding
description:
  Sensor kinase; Protein involved in ATP binding, phosphorelay sensor kinase activity, transferase activity, transferring phosphorus-containing groups, signal transducer activity, regulation of transcription, DNA-templated, phosphorelay signal transduction system and signal transduction.


ensembl_gene_id: GEAM_2873
symbol: GEAM_2873
gene_biotype: protein_coding
description:
  CitB/DpiA family transcriptional regulator; Protein involved in phosphorelay response regulator activity, phosphorelay signal transduction system and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2874
symbol: proV
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily L-proline/glycine/betaine transporter; TC:3.A.1.12.1; Protein involved in protein binding, ATPase activity, ATP binding, nucleotide binding, nucleoside-triphosphatase activity, amine transport and glycine betaine transport.


ensembl_gene_id: GEAM_2875
symbol: ProW
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily L-proline/glycine/betaine transporter; TC:3.A.1.12.1; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_2876
symbol: ProX
gene_biotype: protein_coding
description:
  Substrate-binding component of an ABC superfamily L-proline/glycine/betaine transporter; TC:3.A.1.12.1; Protein involved in transporter activity and transport.


ensembl_gene_id: GEAM_2878
symbol: GEAM_2878
gene_biotype: protein_coding
description:
  FIG01055823; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_2879
symbol: GEAM_2879
gene_biotype: protein_coding
description:
  Major facilitator superfamily (MFS) permease; Protein involved in biological_process and transmembrane transport.


ensembl_gene_id: GEAM_2880
symbol: MprA
gene_biotype: protein_coding
description:
  Transcription repressor; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2882
symbol: EmrA
gene_biotype: protein_coding
description:
  Membrane fusion component of a tripartite multidrug resistance system; Protein involved in drug transmembrane transporter activity, transmembrane transport and drug transmembrane transport.


ensembl_gene_id: GEAM_2884
symbol: GEAM_2884
gene_biotype: protein_coding
description:
  Putative tRNA/rRNA methyltransferase; Protein involved in RNA methyltransferase activity, RNA binding, methyltransferase activity and RNA processing; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: GEAM_2885
symbol: trxC
gene_biotype: protein_coding
description:
  Thioredoxin 2; Protein involved in protein disulfide oxidoreductase activity, electron carrier activity, (OBSOLETE) electron transport, cell redox homeostasis and glycerol ether metabolic process; Belongs to the thioredoxin family.


ensembl_gene_id: GEAM_2888
symbol: PssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Protein involved in catalytic activity, phosphotransferase activity, for other substituted phosphate groups, metabolic process and phospholipid biosynthetic process.


ensembl_gene_id: GEAM_2890
symbol: gmhB
gene_biotype: protein_coding
description:
  D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase; Protein involved in phosphatase activity and carbohydrate metabolic process.


ensembl_gene_id: GEAM_2893
symbol: GEAM_2893
gene_biotype: protein_coding
description:
  Substrate-binding component of an ABC superfamily methionine transporter; Protein involved in biological_process; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: GEAM_2896
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: GEAM_2902
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: GEAM_2905
symbol: AccA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxyl transferase alpha chain; Overlaps another CDS with the same product name; Protein involved in ligase activity, acetyl-CoA carboxylase activity and fatty acid biosynthetic process.


ensembl_gene_id: GEAM_2906
symbol: GEAM_2906
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxyl transferase alpha chain; Overlaps another CDS with the same product name; Protein involved in acetyl-CoA carboxylase activity and fatty acid biosynthetic process.


ensembl_gene_id: GEAM_2907
symbol: dnaE
gene_biotype: protein_coding
description:
  DNA polymerase III alpha subunit; Protein involved in catalytic activity, nucleic acid binding, 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding and DNA replication.


ensembl_gene_id: GEAM_2909
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: GEAM_2910
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: GEAM_2911
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-[ACP] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: GEAM_2912
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O- (hydroxytetradecanoyl)glucosamine using 3-hydroxytetradecanoyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: GEAM_2914
symbol: yaeT
gene_biotype: protein_coding
description:
  YaeT family outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery.


ensembl_gene_id: GEAM_2915
symbol: rseP
gene_biotype: protein_coding
description:
  Membrane-associated zinc metalloprotease; Protein involved in metalloendopeptidase activity, protein binding and proteolysis.


ensembl_gene_id: GEAM_2916
symbol: CdsA
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Protein involved in transferase activity, transferring phosphorus-containing groups and biological_process; Belongs to the CDS family.


ensembl_gene_id: GEAM_2917
symbol: uppS
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: GEAM_2918
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP).


ensembl_gene_id: GEAM_2919
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: GEAM_2921
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: GEAM_2922
symbol: rpsB
gene_biotype: protein_coding
description:
  SSU ribosomal protein S2p; Protein involved in structural constituent of ribosome and translation; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: GEAM_2923
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: GEAM_2924
symbol: glnD
gene_biotype: protein_coding
description:
  PII protein uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: GEAM_2925
symbol: dapD
gene_biotype: protein_coding
description:
  Protein involved in 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity, transferase activity and lysine biosynthetic process via diaminopimelate; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: GEAM_2931
symbol: syd
gene_biotype: protein_coding
description:
  Syd family protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.


ensembl_gene_id: GEAM_2932
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent preQ0 reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: GEAM_2934
symbol: xni
gene_biotype: protein_coding
description:
  DNA polymerase I; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.


ensembl_gene_id: GEAM_2935
symbol: rlmM
gene_biotype: protein_coding
description:
  LSU rRNA 2'-O-methyl-C2498 methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.


ensembl_gene_id: GEAM_2939
symbol: csdA
gene_biotype: protein_coding
description:
  CsdA family cysteine desulfurase component; Protein involved in cysteine desulfurase activity, iron-sulfur cluster assembly and metabolic process.


ensembl_gene_id: GEAM_2942
symbol: GEAM_2942
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase A; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, biological_process and peptidoglycan turnover.


ensembl_gene_id: GEAM_2947
symbol: argA
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase; Protein involved in N-acetyltransferase activity, acetyl-CoA:L-glutamate N-acetyltransferase activity, ornithine biosynthetic process, cellular amino acid biosynthetic process and arginine biosynthetic process; Belongs to the acetyltransferase family. ArgA subfamily.


ensembl_gene_id: GEAM_2948
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...]


ensembl_gene_id: GEAM_2949
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V beta chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repai [...]


ensembl_gene_id: GEAM_2950
symbol: PtrA
gene_biotype: protein_coding
description:
  Protease III; Protein involved in zinc ion binding, metalloendopeptidase activity, metal ion binding, catalytic activity and proteolysis.


ensembl_gene_id: GEAM_2951
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V gamma chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repa [...]


ensembl_gene_id: GEAM_2956
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: GEAM_2957
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: GEAM_2958
symbol: ptsP
gene_biotype: protein_coding
description:
  Phosphocarrier protein kinase/phosphorylase; FIG001592; Protein involved in transferase activity, transferring phosphorus-containing groups, phosphoenolpyruvate-protein phosphotransferase activity, sugar:hydrogen symporter activity, protein binding, catalytic activity, regulation of nitrogen utilization, phosphoenolpyruvate-dependent sugar phosphotransferase system and phosphorylation; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: GEAM_2959
symbol: rppH
gene_biotype: protein_coding
description:
  Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: GEAM_2960
symbol: mutH
gene_biotype: protein_coding
description:
  DNA mismatch repair endonuclease; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.


ensembl_gene_id: GEAM_2963
symbol: lplT
gene_biotype: protein_coding
description:
  Lysophospholipid transporter; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family.


ensembl_gene_id: GEAM_2964
symbol: aas
gene_biotype: protein_coding
description:
  2-acylglycerophosphoethanolamine acyltransferase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: GEAM_2965
symbol: GEAM_2965
gene_biotype: protein_coding
description:
  Biotin sulfoxide reductase; Protein involved in oxidoreductase activity, molybdenum ion binding and oxidation-reduction process; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: GEAM_2966
symbol: GalR
gene_biotype: protein_coding
description:
  GalR/LacI family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2967
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: GEAM_2970
symbol: GEAM_2970
gene_biotype: protein_coding
description:
  Putative sugar transport protein; Protein involved in biological_process and transmembrane transport.


ensembl_gene_id: GEAM_2977
symbol: GEAM_2977
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_2985
symbol: GEAM_2985
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Protein involved in transporter activity, biological_process and transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: GEAM_2986
symbol: GEAM_2986
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein/cation efflux system protein; Protein involved in transporter activity, biological_process and transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: GEAM_2987
symbol: GEAM_2987
gene_biotype: protein_coding
description:
  Putative Co/Zn/Cd efflux system membrane fusion protein; Protein involved in transport and transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: GEAM_2991
symbol: GEAM_2991
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily glutamine transporter; TC:3.A.1.3.2; Protein involved in transporter activity, ionotropic glutamate receptor activity, extracellular-glutamate-gated ion channel activity and transport.


ensembl_gene_id: GEAM_2995
symbol: GEAM_2995
gene_biotype: protein_coding
description:
  L-fucose operon activator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3000
symbol: GEAM_3000
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Protein involved in phosphorus-oxygen lyase activity, protein binding, regulation of signal transduction, intracellular signal transduction and cyclic nucleotide biosynthetic process.


ensembl_gene_id: GEAM_3001
symbol: DcuS
gene_biotype: protein_coding
description:
  Protein involved in ATP binding, phosphorelay sensor kinase activity, transferase activity, transferring phosphorus-containing groups, regulation of transcription, DNA-templated and phosphorelay signal transduction system.


ensembl_gene_id: GEAM_3002
symbol: DcuR
gene_biotype: protein_coding
description:
  Fumarate respiration transcriptional regulator; Protein involved in phosphorelay response regulator activity, phosphorelay signal transduction system and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3005
symbol: GEAM_3005
gene_biotype: protein_coding
description:
  2-oxoglutarate/malate translocator; Protein involved in transporter activity, anion transport, sodium ion transport and transmembrane transport.


ensembl_gene_id: GEAM_3006
symbol: GEAM_3006
gene_biotype: protein_coding
description:
  Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: GEAM_3009
symbol: lysS
gene_biotype: protein_coding
description:
  Class II lysyl-tRNA synthetase; Protein involved in nucleic acid binding, ATP binding, nucleotide binding, aminoacyl-tRNA ligase activity, lysine-tRNA ligase activity, lysyl-tRNA aminoacylation and tRNA aminoacylation for protein translation; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: GEAM_3010
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: GEAM_3011
symbol: recJ
gene_biotype: protein_coding
description:
  Single-stranded DNA-specific exonuclease; Protein involved in hydrolase activity, manganese ion binding, nucleic acid binding, 5'-3' exonuclease activity, DNA recombination and DNA repair.


ensembl_gene_id: GEAM_3012
symbol: DsbC
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: GEAM_3013
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerC binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerD specifically exchanges the bo [...]


ensembl_gene_id: GEAM_3014
symbol: FldB
gene_biotype: protein_coding
description:
  Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: GEAM_3017
symbol: YgfZ
gene_biotype: protein_coding
description:
  Folate-dependent Fe/S cluster synthesis/repair protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family.


ensembl_gene_id: GEAM_3019
symbol: GEAM_3019
gene_biotype: protein_coding
description:
  HAD superfamily hydrolase; Protein involved in phosphoric diester hydrolase activity and metal ion binding.


ensembl_gene_id: GEAM_3021
symbol: GEAM_3021
gene_biotype: protein_coding
description:
  Putative ATP-binding component of an ABC superfamily sugar transporter; Protein involved in transporter activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity and transport; Belongs to the ABC transporter superfamily.


ensembl_gene_id: GEAM_3022
symbol: cpdA
gene_biotype: protein_coding
description:
  3',5'-cyclic-nucleotide phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: GEAM_3023
symbol: GEAM_3023
gene_biotype: protein_coding
description:
  Inositol transport system permease protein; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_3025
symbol: rbsK-3
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: GEAM_3027
symbol: GEAM_3027
gene_biotype: protein_coding
description:
  D-allulose-6-phosphate 3-epimerase; Protein involved in racemase and epimerase activity, acting on carbohydrates and derivatives, catalytic activity, carbohydrate metabolic process and metabolic process.


ensembl_gene_id: GEAM_3028
symbol: GEAM_3028
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily D-allose transporter; Protein involved in transporter activity, biological_process and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3030
symbol: GEAM_3030
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily D-allose transporter; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_3033
symbol: GEAM_3033
gene_biotype: protein_coding
description:
  Putative DNA-binding protein; FIG043818; Protein involved in sequence-specific DNA binding and DNA binding.


ensembl_gene_id: GEAM_3036
symbol: GEAM_3036
gene_biotype: protein_coding
description:
  Amidotransferase/amidase; Protein involved in carbon-nitrogen ligase activity, with glutamine as amido-N-donor; Belongs to the amidase family.


ensembl_gene_id: GEAM_3039
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: GEAM_3040
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: GEAM_3043
symbol: ubiH
gene_biotype: protein_coding
description:
  Protein involved in 2-octaprenyl-6-methoxyphenol hydroxylase activity, flavin adenine dinucleotide binding, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, ubiquinone biosynthetic process and oxidation-reduction process.


ensembl_gene_id: GEAM_3046
symbol: zapA
gene_biotype: protein_coding
description:
  ZapA family Z-ring-associated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: GEAM_3047
symbol: GEAM_3047
gene_biotype: protein_coding
description:
  Protein involved in 5-formyltetrahydrofolate cyclo-ligase activity, ATP binding, one-carbon metabolic process and folic acid-containing compound biosynthetic process.


ensembl_gene_id: GEAM_3050
symbol: SerA
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Protein involved in amino acid binding, cofactor binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, NAD binding, metabolic process and oxidation-reduction process; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: GEAM_3051
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: GEAM_3052
symbol: argP
gene_biotype: protein_coding
description:
  Chromosome initiation inhibitor; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_3054
symbol: lysE
gene_biotype: protein_coding
description:
  Arginine exporter protein; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family.


ensembl_gene_id: GEAM_3055
symbol: MscS
gene_biotype: protein_coding
description:
  Mechanosensitive channel stability protein; Protein involved in biological_process and transmembrane transport.


ensembl_gene_id: GEAM_3057
symbol: lacZ
gene_biotype: protein_coding
description:
  Beta-galactosidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, beta-galactosidase activity, catalytic activity, carbohydrate binding and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: GEAM_3058
symbol: GEAM_3058
gene_biotype: protein_coding
description:
  Lac operon transcriptional repressor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3060
symbol: fbaA
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: GEAM_3061
symbol: pgk
gene_biotype: protein_coding
description:
  Protein involved in phosphoglycerate kinase activity and glycolysis; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: GEAM_3062
symbol: epd
gene_biotype: protein_coding
description:
  D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate.


ensembl_gene_id: GEAM_3064
symbol: GEAM_3064
gene_biotype: protein_coding
description:
  Putative metalloprotease; Protein involved in metalloendopeptidase activity, biological_process and proteolysis.


ensembl_gene_id: GEAM_3068
symbol: GEAM_3068
gene_biotype: protein_coding
description:
  Phosphotriesterase family protein; Protein involved in hydrolase activity, acting on ester bonds, zinc ion binding and catabolic process.


ensembl_gene_id: GEAM_3069
symbol: GEAM_3069
gene_biotype: protein_coding
description:
  Putative phosphopentomutase; Protein involved in metal ion binding, catalytic activity and metabolic process.


ensembl_gene_id: GEAM_3073
symbol: speB
gene_biotype: protein_coding
description:
  Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.


ensembl_gene_id: GEAM_3076
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: GEAM_3077
symbol: GEAM_3077
gene_biotype: protein_coding
description:
  Arabinose-proton symporter; Protein involved in transmembrane transporter activity, substrate-specific transmembrane transporter activity, carbohydrate transport and transmembrane transport; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: GEAM_3080
symbol: RsmE
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: GEAM_3081
symbol: gshB
gene_biotype: protein_coding
description:
  Protein involved in glutathione synthase activity, ATP binding and glutathione biosynthetic process; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: GEAM_3083
symbol: yqgF
gene_biotype: protein_coding
description:
  YqgF family putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: GEAM_3084
symbol: GEAM_3084
gene_biotype: protein_coding
description:
  PilT family twitching motility protein; Protein involved in ATP binding, nucleotide binding, nucleoside-triphosphatase activity, type IV pilus-dependent motility and transport.


ensembl_gene_id: GEAM_3085
symbol: GEAM_3085
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.


ensembl_gene_id: GEAM_3086
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: GEAM_3089
symbol: rdgB
gene_biotype: protein_coding
description:
  Nucleoside 5-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: GEAM_3090
symbol: HemW
gene_biotype: protein_coding
description:
  Radical SAM family enzyme; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: GEAM_3091
symbol: GEAM_3091
gene_biotype: protein_coding
description:
  Ferredoxin-dependent glutamate synthase; Protein involved in oxidoreductase activity, acting on the CH-NH2 group of donors, glutamate synthase activity, oxidation-reduction process and glutamate biosynthetic process.


ensembl_gene_id: GEAM_3093
symbol: glsA
gene_biotype: protein_coding
description:
  Glutaminase; Protein involved in glutaminase activity and glutamine metabolic process; Belongs to the glutaminase family.


ensembl_gene_id: GEAM_3095
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine46-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.


ensembl_gene_id: GEAM_3097
symbol: GEAM_3097
gene_biotype: protein_coding
description:
  Putative Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family.


ensembl_gene_id: GEAM_3098
symbol: mltC
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase C; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: GEAM_3099
symbol: GEAM_3099
gene_biotype: protein_coding
description:
  Tyrosine-protein kinase; Protein involved in enzyme regulator activity, lipopolysaccharide biosynthetic process and capsule polysaccharide biosynthetic process.


ensembl_gene_id: GEAM_3101
symbol: GEAM_3101
gene_biotype: protein_coding
description:
  Wza family polysaccharide export lipoprotein; Protein involved in polysaccharide transmembrane transporter activity, biological_process and polysaccharide transport.


ensembl_gene_id: GEAM_3110
symbol: GEAM_3110
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate-requiring enzyme; COG0028; Protein involved in thiamine pyrophosphate binding and catalytic activity.


ensembl_gene_id: GEAM_3111
symbol: GEAM_3111
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3115
symbol: GEAM_3115
gene_biotype: protein_coding
description:
  Benzoylformate decarboxylase; Protein involved in thiamine pyrophosphate binding, magnesium ion binding and catalytic activity; Belongs to the TPP enzyme family.


ensembl_gene_id: GEAM_3118
symbol: GEAM_3118
gene_biotype: protein_coding
description:
  Protein involved in catalytic activity and metabolic process; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: GEAM_3119
symbol: GEAM_3119
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, fatty-acyl-CoA binding, DNA binding, biological_process, regulation of transcription, DNA-templated and regulation of fatty acid metabolic process.


ensembl_gene_id: GEAM_3129
symbol: GEAM_3129
gene_biotype: protein_coding
description:
  Organic hydroperoxide resistance transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3139
symbol: GEAM_3139
gene_biotype: protein_coding
description:
  PTS system mannitol-specific IIBC components; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, sugar:hydrogen symporter activity, biological_process and phosphoenolpyruvate-dependent sugar phosphotransferase system.


ensembl_gene_id: GEAM_3140
symbol: GEAM_3140
gene_biotype: protein_coding
description:
  Sorbitol-6-phosphate 2-dehydrogenase; Protein involved in oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: GEAM_3141
symbol: GEAM_3141
gene_biotype: protein_coding
description:
  6-phospho-3-hexuloisomerase family protein; Protein involved in carbohydrate binding and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3142
symbol: GEAM_3142
gene_biotype: protein_coding
description:
  Putative pentose isomerase; Protein involved in racemase and epimerase activity, acting on carbohydrates and derivatives, catalytic activity, carbohydrate metabolic process and metabolic process.


ensembl_gene_id: GEAM_3143
symbol: GEAM_3143
gene_biotype: protein_coding
description:
  PTS system fructose-specific IIA component; Protein involved in sugar:hydrogen symporter activity and phosphoenolpyruvate-dependent sugar phosphotransferase system.


ensembl_gene_id: GEAM_3144
symbol: GEAM_3144
gene_biotype: protein_coding
description:
  PTS system mannitol-specific IIA component; Protein involved in sugar:hydrogen symporter activity, transporter activity, transport and phosphoenolpyruvate-dependent sugar phosphotransferase system.


ensembl_gene_id: GEAM_3145
symbol: GEAM_3145
gene_biotype: protein_coding
description:
  DeoR family transcriptional repressor; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3149
symbol: GEAM_3149
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily amino acid transporter; Protein involved in transporter activity, ionotropic glutamate receptor activity, extracellular-glutamate-gated ion channel activity and transport; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: GEAM_3154
symbol: GEAM_3154
gene_biotype: protein_coding
description:
  Thiosulfate reductase cytochrome B subunit; Protein involved in electron carrier activity, biological_process and respiratory electron transport chain.


ensembl_gene_id: GEAM_3156
symbol: GEAM_3156
gene_biotype: protein_coding
description:
  Osmosensitive K+ channel histidine kinase; Protein involved in phosphorelay sensor kinase activity, ATP binding, signal transducer activity, biological_process and signal transduction.


ensembl_gene_id: GEAM_3168
symbol: GEAM_3168
gene_biotype: protein_coding
description:
  Putative cold-shock protein; Protein involved in DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3169
symbol: AlkB
gene_biotype: protein_coding
description:
  Alkylated DNA repair protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity and oxidation-reduction process.


ensembl_gene_id: GEAM_3172
symbol: exbB
gene_biotype: protein_coding
description:
  MotA/TolQ/ExbB family proton channel protein; Protein involved in protein transporter activity and transport.


ensembl_gene_id: GEAM_3174
symbol: GEAM_3174
gene_biotype: protein_coding
description:
  Small permease component of a TRAP-type predicted N-acetylneuraminate transporter; Protein involved in biological_process.


ensembl_gene_id: GEAM_3175
symbol: GEAM_3175
gene_biotype: protein_coding
description:
  Large permease component of a TRAP-type C4-dicarboxylate transporter; Protein involved in C4-dicarboxylate transport.


ensembl_gene_id: GEAM_3176
symbol: metC
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Protein involved in pyridoxal phosphate binding, cystathionine beta-lyase activity, methionine biosynthetic process and cellular amino acid metabolic process.


ensembl_gene_id: GEAM_3178
symbol: GEAM_3178
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3180
symbol: ftsP
gene_biotype: protein_coding
description:
  Putative cell division protein; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress; Belongs to the FtsP family.


ensembl_gene_id: GEAM_3181
symbol: GEAM_3181
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Protein involved in transferase activity, transferring acyl groups, 1-acylglycerol-3-phosphate O-acyltransferase activity, metabolic process and phospholipid biosynthetic process; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: GEAM_3182
symbol: parC
gene_biotype: protein_coding
description:
  Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: GEAM_3187
symbol: parE
gene_biotype: protein_coding
description:
  Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: GEAM_3191
symbol: NudF
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Protein involved in hydrolase activity, metal ion binding and hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides.


ensembl_gene_id: GEAM_3192
symbol: TolC
gene_biotype: protein_coding
description:
  Type I secretion outer membrane protein; Protein involved in transporter activity, transport and protein transport.


ensembl_gene_id: GEAM_3195
symbol: YgiD
gene_biotype: protein_coding
description:
  YgiD family protein; Protein involved in oxidoreductase activity, ferrous iron binding and cellular aromatic compound metabolic process.


ensembl_gene_id: GEAM_3196
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: GEAM_3198
symbol: rfaE
gene_biotype: protein_coding
description:
  ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: GEAM_3199
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: GEAM_3202
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: GEAM_3203
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: GEAM_3204
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: GEAM_3205
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate:glycerol-3-phosphate O-acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: GEAM_3206
symbol: tsaD
gene_biotype: protein_coding
description:
  Glycoprotease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: GEAM_3207
symbol: rpsU
gene_biotype: protein_coding
description:
  SSU ribosomal protein S21p; Protein involved in structural constituent of ribosome and translation; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: GEAM_3208
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: GEAM_3209
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: GEAM_3210
symbol: mug
gene_biotype: protein_coding
description:
  G:T/U mismatch-specific uracil/thymine DNA-glycosylase; Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells; Belongs to the uracil-DNA glycosylase (UDG) superfamily. TDG/mug family.


ensembl_gene_id: GEAM_3213
symbol: GEAM_3213
gene_biotype: protein_coding
description:
  FIG00731420; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_3222
symbol: GEAM_3222
gene_biotype: protein_coding
description:
  Sensor histidine kinase; Protein involved in ATP binding, signal transducer activity, phosphorelay sensor kinase activity and signal transduction.


ensembl_gene_id: GEAM_3225
symbol: GEAM_3225
gene_biotype: protein_coding
description:
  Putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Protein involved in isomerase activity and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3232
symbol: malK
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily maltose/maltodextrin transporter; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.


ensembl_gene_id: GEAM_3233
symbol: MalE
gene_biotype: protein_coding
description:
  Substrate-binding component of an ABC superfamily maltose/maltodextrin transporter; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.


ensembl_gene_id: GEAM_3234
symbol: GEAM_3234
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily maltose/maltodextrin transporter; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_3239
symbol: GEAM_3239
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily iron(III) transporter; Protein involved in binding.


ensembl_gene_id: GEAM_3241
symbol: GEAM_3241
gene_biotype: protein_coding
description:
  Putative protein kinase; FIG00905405; Protein involved in catalytic activity, ATP binding, transferase activity, transferring phosphorus-containing groups and protein serine/threonine kinase activity.


ensembl_gene_id: GEAM_3249
symbol: GEAM_3249
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_3251
symbol: GEAM_3251
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Protein involved in oxidoreductase activity, oxidation-reduction process and metabolic process; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: GEAM_3261
symbol: GEAM_3261
gene_biotype: protein_coding
description:
  FIG00959392; Protein involved in DNA binding, biological_process, DNA integration and DNA recombination.


ensembl_gene_id: GEAM_3263
symbol: GEAM_3263
gene_biotype: protein_coding
description:
  Phage integrase family protein; Protein involved in DNA binding, DNA integration and DNA recombination.


ensembl_gene_id: GEAM_3264
symbol: ssb
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: GEAM_3265
symbol: uvrA
gene_biotype: protein_coding
description:
  ABC superfamily excinuclease subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: GEAM_3268
symbol: GEAM_3268
gene_biotype: protein_coding
description:
  Flavohemoprotein; Protein involved in FMN binding, pyridoxamine-phosphate oxidase activity and oxidation-reduction process.


ensembl_gene_id: GEAM_3271
symbol: GEAM_3271
gene_biotype: protein_coding
description:
  Biosynthetic aromatic amino acid aminotransferase; Protein involved in pyridoxal phosphate binding, transaminase activity, biosynthetic process and cellular amino acid metabolic process.


ensembl_gene_id: GEAM_3274
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: GEAM_3275
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: GEAM_3278
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: GEAM_3279
symbol: GEAM_3279
gene_biotype: protein_coding
description:
  Sugar-proton symporter; Protein involved in transmembrane transporter activity, substrate-specific transmembrane transporter activity, carbohydrate transport and transmembrane transport; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: GEAM_3280
symbol: GEAM_3280
gene_biotype: protein_coding
description:
  Aldose 1-epimerase; Protein involved in isomerase activity, catalytic activity, carbohydrate binding and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3281
symbol: GEAM_3281
gene_biotype: protein_coding
description:
  Putative zinc-type alcohol dehydrogenase; Protein involved in oxidoreductase activity, zinc ion binding, transferase activity, transferring acyl groups other than amino-acyl groups and oxidation-reduction process.


ensembl_gene_id: GEAM_3282
symbol: GEAM_3282
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily sugar transporter; Protein involved in transporter activity, biological_process and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3283
symbol: GEAM_3283
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily sugar transporter; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_3287
symbol: Zur
gene_biotype: protein_coding
description:
  Zinc uptake regulation protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the Fur family.


ensembl_gene_id: GEAM_3289
symbol: DinF
gene_biotype: protein_coding
description:
  DNA-damage-inducible protein F; Protein involved in antiporter activity, drug transmembrane transporter activity, drug transmembrane transport, response to drug and transmembrane transport.


ensembl_gene_id: GEAM_3290
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response repressor/protease; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: GEAM_3291
symbol: GEAM_3291
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: GEAM_3292
symbol: plsB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Protein involved in transferase activity, transferring acyl groups, glycerol-3-phosphate O-acyltransferase activity, metabolic process, cellular lipid metabolic process and phospholipid biosynthetic process; Belongs to the GPAT/DAPAT family.


ensembl_gene_id: GEAM_3293
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: GEAM_3294
symbol: ubiC
gene_biotype: protein_coding
description:
  Chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway.


ensembl_gene_id: GEAM_3296
symbol: pgi
gene_biotype: protein_coding
description:
  Protein involved in glucose-6-phosphate isomerase activity, gluconeogenesis and glycolysis; Belongs to the GPI family.


ensembl_gene_id: GEAM_3297
symbol: LysC
gene_biotype: protein_coding
description:
  Aspartokinase; Protein involved in amino acid binding, aspartate kinase activity, lysine biosynthetic process via diaminopimelate, metabolic process and cellular amino acid biosynthetic process; Belongs to the aspartokinase family.


ensembl_gene_id: GEAM_3298
symbol: PanS
gene_biotype: protein_coding
description:
  Sodium-dependent transporter; Protein involved in bile acid:sodium symporter activity, biological_process and sodium ion transport.


ensembl_gene_id: GEAM_3302
symbol: GEAM_3302
gene_biotype: protein_coding
description:
  Putative ATP-binding component of an ABC superfamily transporter; Protein involved in ATPase activity, ATP binding, transporter activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, nucleotide binding, nucleoside-triphosphatase activity and transport; Belongs to the ABC transporter superfamily.


ensembl_gene_id: GEAM_3303
symbol: GEAM_3303
gene_biotype: protein_coding
description:
  Membrane component of an ABC superfamily thiamine transporter; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_3304
symbol: GEAM_3304
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily transporter; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_3307
symbol: GEAM_3307
gene_biotype: protein_coding
description:
  2-aminoethylphosphonate uptake and metabolism regulator; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3308
symbol: metH
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: GEAM_3309
symbol: IclR
gene_biotype: protein_coding
description:
  Acetate operon repressor; Protein involved in DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3310
symbol: aceK
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase phosphatase/kinase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: GEAM_3311
symbol: aceA
gene_biotype: protein_coding
description:
  Isocitrate lyase; Protein involved in catalytic activity, isocitrate lyase activity, tricarboxylic acid cycle, metabolic process and carboxylic acid metabolic process.


ensembl_gene_id: GEAM_3312
symbol: aceB
gene_biotype: protein_coding
description:
  Protein involved in malate synthase activity, catalytic activity, tricarboxylic acid cycle and glyoxylate cycle.


ensembl_gene_id: GEAM_3313
symbol: metA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: GEAM_3315
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase I alpha; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: GEAM_3316
symbol: tsaC
gene_biotype: protein_coding
description:
  RNA-binding protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: GEAM_3317
symbol: GEAM_3317
gene_biotype: protein_coding
description:
  Zn-finger domain-containing protein; Protein involved in DNA topoisomerase activity, DNA binding and DNA topological change.


ensembl_gene_id: GEAM_3320
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: GEAM_3321
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: GEAM_3322
symbol: sun
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: GEAM_3323
symbol: TrkA
gene_biotype: protein_coding
description:
  Trk system potassium uptake protein; Protein involved in cation transmembrane transporter activity and potassium ion transport.


ensembl_gene_id: GEAM_3324
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: GEAM_3326
symbol: zntR
gene_biotype: protein_coding
description:
  HTH family transcriptional regulator; Protein involved in nucleotide binding, sequence-specific DNA binding transcription factor activity, cellular zinc ion homeostasis, response to zinc ion and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3329
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: GEAM_3330
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: GEAM_3331
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11p (S14e); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: GEAM_3332
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13p (S18e); Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: GEAM_3334
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: GEAM_3335
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: GEAM_3337
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5p (S2e); Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: GEAM_3338
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18p (L5e); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: GEAM_3339
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6p (L9e); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: GEAM_3340
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8p (S15Ae); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: GEAM_3341
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: GEAM_3342
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5p (L11e); This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: GEAM_3343
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24p (L26e); One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: GEAM_3344
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14p (L23e); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: GEAM_3345
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17p (S11e); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: GEAM_3346
symbol: rpmC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L29p (L35e); Protein involved in structural constituent of ribosome and translation; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: GEAM_3347
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16p (L10e); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: GEAM_3348
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3p (S3e); Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: GEAM_3349
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: GEAM_3350
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19p (S15e); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: GEAM_3351
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2p (L8e); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: GEAM_3352
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23p (L23Ae); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: GEAM_3354
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3p (L3e); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: GEAM_3355
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: GEAM_3357
symbol: bfr
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: GEAM_3358
symbol: tufA
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: GEAM_3360
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: GEAM_3361
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: GEAM_3362
symbol: dsrH
gene_biotype: protein_coding
description:
  TusB family tRNA 5-methylaminomethyl-2-thiouridine synthase; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions.


ensembl_gene_id: GEAM_3363
symbol: tusC
gene_biotype: protein_coding
description:
  TusC family tRNA 5-methylaminomethyl-2-thiouridine synthase; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions.


ensembl_gene_id: GEAM_3364
symbol: tusD
gene_biotype: protein_coding
description:
  TusD family tRNA 5-methylaminomethyl-2-thiouridine synthase; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE.


ensembl_gene_id: GEAM_3370
symbol: kefB
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.


ensembl_gene_id: GEAM_3371
symbol: kefG
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system ancillary protein; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.


ensembl_gene_id: GEAM_3372
symbol: GEAM_3372
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system ATP-binding protein; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_3373
symbol: TauD
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate-dependent taurine dioxygenase; Protein involved in oxidoreductase activity and oxidation-reduction process.


ensembl_gene_id: GEAM_3374
symbol: TauC
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily taurine transporter; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_3375
symbol: tauB
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily taurine transporter; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.


ensembl_gene_id: GEAM_3376
symbol: tauA
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily taurine transporter; Protein involved in transporter activity, taurine transport and transport.


ensembl_gene_id: GEAM_3382
symbol: GEAM_3382
gene_biotype: protein_coding
description:
  Guanine deaminase/hydroxydechloroatrazine ethylaminohydrolase; Protein involved in hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and biological_process.


ensembl_gene_id: GEAM_3385
symbol: GEAM_3385
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily monosaccharide transporter; Protein involved in transporter activity, biological_process and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3386
symbol: GEAM_3386
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily nucleoside transporter; Protein involved in transporter activity, biological_process and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3391
symbol: GEAM_3391
gene_biotype: protein_coding
description:
  Phosphoribulokinase family protein; Protein involved in kinase activity, ATP binding and metabolic process.


ensembl_gene_id: GEAM_3394
symbol: GEAM_3394
gene_biotype: protein_coding
description:
  Threonine catabolic operon transcriptional activator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_3396
symbol: Crp
gene_biotype: protein_coding
description:
  Cyclic AMP receptor protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3398
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase/N-succinyl-L,L-diaminopimelate aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: GEAM_3400
symbol: GEAM_3400
gene_biotype: protein_coding
description:
  Putative secretion ATPase; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances, ATPase activity, peptidase activity, nucleotide binding, nucleoside-triphosphatase activity, biological_process, transport, transmembrane transport and proteolysis.


ensembl_gene_id: GEAM_3408
symbol: GEAM_3408
gene_biotype: protein_coding
description:
  6-phospho-beta-glucosidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, carbohydrate metabolic process and oxidation-reduction process.


ensembl_gene_id: GEAM_3411
symbol: nirB
gene_biotype: protein_coding
description:
  Nitrite reductase [NAD(P)H] large subunit; Protein involved in heme binding, oxidoreductase activity, iron-sulfur cluster binding, flavin adenine dinucleotide binding, nitrite reductase [NAD(P)H] activity, NADP binding, oxidation-reduction process and nitrate assimilation; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: GEAM_3412
symbol: nirD
gene_biotype: protein_coding
description:
  Protein involved in nitrite reductase [NAD(P)H] activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, nitrate assimilation and oxidation-reduction process.


ensembl_gene_id: GEAM_3414
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: GEAM_3415
symbol: gph
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: GEAM_3416
symbol: rpe
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Protein involved in racemase and epimerase activity, acting on carbohydrates and derivatives, catalytic activity, pentose-phosphate shunt, carbohydrate metabolic process and metabolic process; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: GEAM_3417
symbol: dam
gene_biotype: protein_coding
description:
  Methyl-directed repair DNA adenine methylase; Protein involved in site-specific DNA-methyltransferase (adenine-specific) activity, DNA methylation and DNA methylation on adenine.


ensembl_gene_id: GEAM_3419
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: GEAM_3420
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: GEAM_3421
symbol: pilQ
gene_biotype: protein_coding
description:
  PilQ family type IV pilus biogenesis protein; Protein involved in pilus assembly and protein secretion.


ensembl_gene_id: GEAM_3425
symbol: MrcA
gene_biotype: protein_coding
description:
  Multimodular transpeptidase-transglycosylase; Protein involved in catalytic activity, penicillin binding, transferase activity, transferring pentosyl groups, peptidase activity, peptidoglycan biosynthetic process, peptidoglycan-based cell wall biogenesis and response to antibiotic.


ensembl_gene_id: GEAM_3429
symbol: HslR
gene_biotype: protein_coding
description:
  Ribosome-associated heat shock protein; Protein involved in RNA binding; Belongs to the HSP15 family.


ensembl_gene_id: GEAM_3430
symbol: hslO
gene_biotype: protein_coding
description:
  Hsp33 family heat shock protein/chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: GEAM_3431
symbol: pckA
gene_biotype: protein_coding
description:
  ATP-utilizing phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: GEAM_3432
symbol: EnvZ
gene_biotype: protein_coding
description:
  Osmolarity sensory histidine kinase; Protein involved in signal transducer activity, phosphorelay sensor kinase activity, ATP binding and signal transduction.


ensembl_gene_id: GEAM_3434
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: GEAM_3435
symbol: GEAM_3435
gene_biotype: protein_coding
description:
  S1 RNA-binding domain-containing transcription accessory protein; Protein involved in RNA binding, nucleic acid binding, hydrolase activity, acting on ester bonds and nucleobase-containing compound metabolic process.


ensembl_gene_id: GEAM_3437
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: GEAM_3438
symbol: feoC
gene_biotype: protein_coding
description:
  Ferrous iron-sensing transcriptional regulator; May function as a transcriptional regulator that controls feoABC expression.


ensembl_gene_id: GEAM_3441
symbol: bioH
gene_biotype: protein_coding
description:
  BioH family biotin synthesis protein; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.


ensembl_gene_id: GEAM_3443
symbol: nfuA
gene_biotype: protein_coding
description:
  NfuA family Fe-S protein maturation protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.


ensembl_gene_id: GEAM_3444
symbol: malQ
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase/amylomaltase; Protein involved in 4-alpha-glucanotransferase activity, glycogen catabolic process and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3445
symbol: MalP
gene_biotype: protein_coding
description:
  Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: GEAM_3447
symbol: GEAM_3447
gene_biotype: protein_coding
description:
  L-ribulose-5-phosphate 3-epimerase; Protein involved in intramolecular oxidoreductase activity, interconverting aldoses and ketoses and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3448
symbol: GEAM_3448
gene_biotype: protein_coding
description:
  Protein involved in orotidine-5'-phosphate decarboxylase activity, catalytic activity, 'de novo' pyrimidine nucleobase biosynthetic process and metabolic process.


ensembl_gene_id: GEAM_3449
symbol: UlaC
gene_biotype: protein_coding
description:
  PTS system ascorbate-specific IIA component; Protein involved in sugar:hydrogen symporter activity, transporter activity, transport and phosphoenolpyruvate-dependent sugar phosphotransferase system.


ensembl_gene_id: GEAM_3450
symbol: UlaB
gene_biotype: protein_coding
description:
  PTS system ascorbate-specific IIB component; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity and phosphoenolpyruvate-dependent sugar phosphotransferase system.


ensembl_gene_id: GEAM_3451
symbol: UlaA
gene_biotype: protein_coding
description:
  PTS system ascorbate-specific IIC component; Protein involved in biological_process and phosphoenolpyruvate-dependent sugar phosphotransferase system.


ensembl_gene_id: GEAM_3453
symbol: UlaR
gene_biotype: protein_coding
description:
  HTH family ascorbate utilization transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3454
symbol: glpE
gene_biotype: protein_coding
description:
  Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.


ensembl_gene_id: GEAM_3459
symbol: glpG
gene_biotype: protein_coding
description:
  GlpG family membrane protein; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.


ensembl_gene_id: GEAM_3460
symbol: GEAM_3460
gene_biotype: protein_coding
description:
  DeoR family glycerol-3-phosphate regulon repressor; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3461
symbol: GlpD
gene_biotype: protein_coding
description:
  Aerobic glycerol-3-phosphate dehydrogenase; Protein involved in oxidoreductase activity and oxidation-reduction process; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: GEAM_3463
symbol: glgP
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: GEAM_3465
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: GEAM_3466
symbol: glgX
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme; Removes maltotriose and maltotetraose chains that are attached by 1,6-alpha-linkage to the limit dextrin main chain, generating a debranched limit dextrin.


ensembl_gene_id: GEAM_3467
symbol: glgB
gene_biotype: protein_coding
description:
  GH-13 family 1,4-alpha-glucan (glycogen) branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: GEAM_3468
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: GEAM_3471
symbol: GntT
gene_biotype: protein_coding
description:
  Protein involved in gluconate transmembrane transporter activity, monocarboxylic acid transport and gluconate transmembrane transport.


ensembl_gene_id: GEAM_3472
symbol: GEAM_3472
gene_biotype: protein_coding
description:
  Gluconokinase; Protein involved in ATP binding, shikimate kinase activity, kinase activity and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3474
symbol: GEAM_3474
gene_biotype: protein_coding
description:
  Beta-glucosidase/6-phospho-beta-glucosidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: GEAM_3476
symbol: GntR
gene_biotype: protein_coding
description:
  Gluconate utilization system transcriptional repressor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3480
symbol: GEAM_3480
gene_biotype: protein_coding
description:
  Putative hemolysin; Protein involved in transferase activity, transferring acyl groups and metabolic process.


ensembl_gene_id: GEAM_3481
symbol: GEAM_3481
gene_biotype: protein_coding
description:
  Phage tail collar protein; Protein involved in pathogenesis and protein secretion by the type V secretion system.


ensembl_gene_id: GEAM_3486
symbol: GEAM_3486
gene_biotype: protein_coding
description:
  2-hydroxy-3-oxopropionate reductase; Protein involved in phosphogluconate dehydrogenase (decarboxylating) activity, oxidoreductase activity, oxidation-reduction process and pentose-phosphate shunt.


ensembl_gene_id: GEAM_3488
symbol: GEAM_3488
gene_biotype: protein_coding
description:
  Protein involved in ATP binding, phosphorelay sensor kinase activity, signal transducer activity and signal transduction.


ensembl_gene_id: GEAM_3489
symbol: GEAM_3489
gene_biotype: protein_coding
description:
  Transcriptional activator; Protein involved in phosphorelay response regulator activity, sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding, phosphorelay signal transduction system and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3498
symbol: PitA
gene_biotype: protein_coding
description:
  Protein involved in inorganic phosphate transmembrane transporter activity, biological_process and phosphate ion transport.


ensembl_gene_id: GEAM_3501
symbol: rsmJ
gene_biotype: protein_coding
description:
  rRNA small subunit methyltransferase J; Specifically methylates the guanosine in position 1516 of 16S rRNA.


ensembl_gene_id: GEAM_3505
symbol: gor
gene_biotype: protein_coding
description:
  Glutathione reductase; Protein involved in flavin adenine dinucleotide binding, oxidoreductase activity, glutathione-disulfide reductase activity, NADP binding, (OBSOLETE) electron transport, cell redox homeostasis, oxidation-reduction process and glutathione metabolic process.


ensembl_gene_id: GEAM_3509
symbol: GEAM_3509
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Protein involved in transferase activity.


ensembl_gene_id: GEAM_3513
symbol: GEAM_3513
gene_biotype: protein_coding
description:
  Calcineurin-like phosphoesterase superfamily protein; Protein involved in hydrolase activity, acting on ester bonds.


ensembl_gene_id: GEAM_3516
symbol: GEAM_3516
gene_biotype: protein_coding
description:
  ATP-binding and permease components of an ABC superfamily transporter; Protein involved in ATPase activity, ATP binding, ATPase activity, coupled to transmembrane movement of substances, nucleotide binding, nucleoside-triphosphatase activity, biological_process, transport and transmembrane transport.


ensembl_gene_id: GEAM_3517
symbol: GEAM_3517
gene_biotype: protein_coding
description:
  HAD superfamily hydrolase; Protein involved in hydrolase activity, catalytic activity and metabolic process.


ensembl_gene_id: GEAM_3518
symbol: GEAM_3518
gene_biotype: protein_coding
description:
  Major facilitator superfamily permease; Protein involved in drug transmembrane transport, response to drug, transmembrane transport and transport; Belongs to the major facilitator superfamily.


ensembl_gene_id: GEAM_3520
symbol: GEAM_3520
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein; Protein involved in biological_process and transmembrane transport.


ensembl_gene_id: GEAM_3522
symbol: GEAM_3522
gene_biotype: protein_coding
description:
  Ada family regulatory protein/methylated-DNA--protein-cysteine methyltransferase; Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding, zinc ion binding, methyltransferase activity, catalytic activity, DNA repair and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3525
symbol: CytX
gene_biotype: protein_coding
description:
  Putative hydroxymethylpyrimidine transporter; Protein involved in nucleobase transmembrane transporter activity, biological_process and nucleobase transport.


ensembl_gene_id: GEAM_3526
symbol: mqo
gene_biotype: protein_coding
description:
  Malate:quinone oxidoreductase; Protein involved in malate dehydrogenase (quinone) activity, tricarboxylic acid cycle and oxidation-reduction process.


ensembl_gene_id: GEAM_3528
symbol: GEAM_3528
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding, sigma factor activity, regulation of transcription, DNA-templated and DNA-templated transcription, initiation; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: GEAM_3530
symbol: GEAM_3530
gene_biotype: protein_coding
description:
  Cytochrome b561 family protein; Protein involved in biological_process and respiratory electron transport chain.


ensembl_gene_id: GEAM_3531
symbol: ycgR
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.


ensembl_gene_id: GEAM_3535
symbol: GEAM_3535
gene_biotype: protein_coding
description:
  Protein involved in transmembrane transporter activity, transporter activity, transport and transmembrane transport.


ensembl_gene_id: GEAM_3536
symbol: cdh
gene_biotype: protein_coding
description:
  Protein involved in CDP-diacylglycerol diphosphatase activity, catalytic activity and phospholipid biosynthetic process.


ensembl_gene_id: GEAM_3543
symbol: GEAM_3543
gene_biotype: protein_coding
description:
  Putative peptidase; Protein involved in metalloendopeptidase activity, zinc ion binding, metal ion binding, catalytic activity and proteolysis.


ensembl_gene_id: GEAM_3544
symbol: dctA
gene_biotype: protein_coding
description:
  Aerobic C4-dicarboxylate transporter; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: GEAM_3545
symbol: HmsP
gene_biotype: protein_coding
description:
  Putative membrane protein; Protein involved in signal transducer activity, phosphorus-oxygen lyase activity, signal transduction, intracellular signal transduction and cyclic nucleotide biosynthetic process.


ensembl_gene_id: GEAM_3552
symbol: GEAM_3552
gene_biotype: protein_coding
description:
  Endoglucanase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 8 (cellulase D) family.


ensembl_gene_id: GEAM_3553
symbol: GEAM_3553
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily dipeptide transporter; TC:3.A.1.5.2; Protein involved in ATPase activity, ATP binding, nucleotide binding, peptide transporter activity, nucleoside-triphosphatase activity and peptide transport; Belongs to the ABC transporter superfamily.


ensembl_gene_id: GEAM_3554
symbol: DppD
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily dipeptide transporter; TC:3.A.1.5.2; Protein involved in ATP binding, nucleotide binding, ATPase activity, peptide transporter activity, nucleoside-triphosphatase activity and peptide transport; Belongs to the ABC transporter superfamily.


ensembl_gene_id: GEAM_3567
symbol: atzF
gene_biotype: protein_coding
description:
  Allophanate hydrolase; Protein involved in carbon-nitrogen ligase activity, with glutamine as amido-N-donor and urea metabolic process.


ensembl_gene_id: GEAM_3568
symbol: uca
gene_biotype: protein_coding
description:
  Urea carboxylase; Protein involved in ligase activity, ATP binding, catalytic activity, peptidyl-prolyl cis-trans isomerase activity, urea metabolic process, metabolic process and protein folding.


ensembl_gene_id: GEAM_3571
symbol: urtB
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily urea transporter; Protein involved in transporter activity, binding, urea transport and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3572
symbol: urtC
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily urea transporter; Protein involved in transporter activity, urea transport and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3573
symbol: urtD
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily urea transporter; Protein involved in ATPase activity, ATP binding and urea transport.


ensembl_gene_id: GEAM_3574
symbol: urtE
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily urea transporter; Protein involved in ATPase activity, ATP binding, nucleotide binding, nucleoside-triphosphatase activity and urea transport.


ensembl_gene_id: GEAM_3588
symbol: GEAM_3588
gene_biotype: protein_coding
description:
  L-idonate 5-dehydrogenase; Protein involved in oxidoreductase activity, zinc ion binding and oxidation-reduction process.


ensembl_gene_id: GEAM_3592
symbol: wecH
gene_biotype: protein_coding
description:
  Inner membrane protein; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.


ensembl_gene_id: GEAM_3596
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: GEAM_3597
symbol: SodA
gene_biotype: protein_coding
description:
  Manganese superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: GEAM_3604
symbol: mtlD
gene_biotype: protein_coding
description:
  Mannitol-1-phosphate 5-dehydrogenase; Protein involved in oxidoreductase activity, coenzyme binding and oxidation-reduction process.


ensembl_gene_id: GEAM_3605
symbol: mtlA
gene_biotype: protein_coding
description:
  PTS system mannitol-specific IIBC components; Protein involved in sugar:hydrogen symporter activity, protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, transporter activity, biological_process, transport and phosphoenolpyruvate-dependent sugar phosphotransferase system.


ensembl_gene_id: GEAM_3611
symbol: glyS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase beta chain; Protein involved in ATP binding, arginine-tRNA ligase activity, nucleotide binding, glycine-tRNA ligase activity, glycyl-tRNA aminoacylation and arginyl-tRNA aminoacylation.


ensembl_gene_id: GEAM_3612
symbol: glyQ
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase alpha chain; Protein involved in glycine-tRNA ligase activity, ATP binding, nucleotide binding and glycyl-tRNA aminoacylation.


ensembl_gene_id: GEAM_3615
symbol: GEAM_3615
gene_biotype: protein_coding
description:
  Outer membrane esterase; Protein involved in hydrolase activity, acting on ester bonds, pathogenesis, protein secretion by the type V secretion system and lipid metabolic process.


ensembl_gene_id: GEAM_3616
symbol: tag
gene_biotype: protein_coding
description:
  Protein involved in DNA-3-methyladenine glycosylase activity, catalytic activity, DNA repair and base-excision repair.


ensembl_gene_id: GEAM_3619
symbol: GEAM_3619
gene_biotype: protein_coding
description:
  2-ketogluconate utilization repressor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3623
symbol: ghrB
gene_biotype: protein_coding
description:
  Broad specificity glyoxylate/hydroxypyruvate/2-ketoaldonate reductase; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.


ensembl_gene_id: GEAM_3624
symbol: GEAM_3624
gene_biotype: protein_coding
description:
  Valine--pyruvate aminotransferase; Protein involved in pyridoxal phosphate binding and biosynthetic process.


ensembl_gene_id: GEAM_3626
symbol: ibpA
gene_biotype: protein_coding
description:
  Heat shock protein A; Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK/DnaJ/GrpE. Its activity is ATP-independent.


ensembl_gene_id: GEAM_3630
symbol: dgoD
gene_biotype: protein_coding
description:
  Galactonate dehydratase; Catalyzes the dehydration of D-galactonate to 2-keto-3-deoxy- D-galactonate.


ensembl_gene_id: GEAM_3631
symbol: GEAM_3631
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphogalactonate aldolase; Protein involved in lyase activity and metabolic process.


ensembl_gene_id: GEAM_3633
symbol: GEAM_3633
gene_biotype: protein_coding
description:
  D-galactonate repressor; Protein involved in sequence-specific DNA binding transcription factor activity, fatty-acyl-CoA binding, DNA binding, regulation of transcription, DNA-templated and regulation of fatty acid metabolic process.


ensembl_gene_id: GEAM_3634
symbol: YidA
gene_biotype: protein_coding
description:
  Haloacid dehalogenase-like sugar phosphatase; Protein involved in catalytic activity, hydrolase activity and metabolic process.


ensembl_gene_id: GEAM_3635
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: GEAM_3636
symbol: recF
gene_biotype: protein_coding
description:
  DNA recombination and repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: GEAM_3637
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: GEAM_3638
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: GEAM_3639
symbol: rpmH
gene_biotype: protein_coding
description:
  LSU ribosomal protein L34p; Protein involved in structural constituent of ribosome and translation; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: GEAM_3640
symbol: yidC
gene_biotype: protein_coding
description:
  Inner membrane protein translocase component; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: GEAM_3641
symbol: trmE
gene_biotype: protein_coding
description:
  GTPase/tRNA-U34 5-formylation enzyme; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: GEAM_3643
symbol: GEAM_3643
gene_biotype: protein_coding
description:
  Protein involved in transmembrane transporter activity, biological_process and transmembrane transport.


ensembl_gene_id: GEAM_3644
symbol: fae
gene_biotype: protein_coding
description:
  Formaldehyde activating enzyme; Protein involved in carbon-nitrogen lyase activity and carbohydrate biosynthetic process.


ensembl_gene_id: GEAM_3648
symbol: GEAM_3648
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein III; Protein involved in signal transducer activity and signal transduction.


ensembl_gene_id: GEAM_3653
symbol: phoU
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions.


ensembl_gene_id: GEAM_3654
symbol: pstB
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily phosphate transporter; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: GEAM_3655
symbol: pstA
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily phosphate transporter; TC:3.A.1.7.1; Protein involved in transporter activity, inorganic phosphate transmembrane transporter activity, phosphate ion transport, transport and phosphate ion transmembrane transport.


ensembl_gene_id: GEAM_3656
symbol: pstC
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily phosphate transporter; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: GEAM_3657
symbol: pstS
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily phosphate transporter; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: GEAM_3658
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: GEAM_3659
symbol: glmU
gene_biotype: protein_coding
description:
  N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: GEAM_3660
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: GEAM_3661
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: GEAM_3662
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: GEAM_3663
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: GEAM_3664
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: GEAM_3665
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: GEAM_3666
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: GEAM_3667
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: GEAM_3669
symbol: gidB
gene_biotype: protein_coding
description:
  rRNA small subunit 7-methylguanosine (m7G) methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: GEAM_3670
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: GEAM_3672
symbol: AsnC
gene_biotype: protein_coding
description:
  AsnC family regulatory protein; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3675
symbol: RavA
gene_biotype: protein_coding
description:
  Putative regulatory protein; Protein involved in ATPase activity, ATP binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_3676
symbol: kup
gene_biotype: protein_coding
description:
  Kup system potassium uptake protein; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: GEAM_3677
symbol: rbsD
gene_biotype: protein_coding
description:
  High-affinity permease component of an ABC superfamily ribose transporter; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.


ensembl_gene_id: GEAM_3678
symbol: rbsA
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily ribose transporter; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: GEAM_3684
symbol: mobB
gene_biotype: protein_coding
description:
  MobB family molybdopterin-guanine dinucleotide biosynthesis protein; Protein involved in GTP binding and Mo-molybdopterin cofactor biosynthetic process.


ensembl_gene_id: GEAM_3685
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: GEAM_3687
symbol: srkA
gene_biotype: protein_coding
description:
  Serine/threonine kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: GEAM_3688
symbol: DsbA
gene_biotype: protein_coding
description:
  Periplasmic thiol:disulfide interchange protein; Protein involved in protein disulfide oxidoreductase activity.


ensembl_gene_id: GEAM_3689
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: GEAM_3690
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: GEAM_3691
symbol: yihI
gene_biotype: protein_coding
description:
  Uncharacterized DUF414 family protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.


ensembl_gene_id: GEAM_3692
symbol: hemN
gene_biotype: protein_coding
description:
  Protein involved in catalytic activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, porphyrin-containing compound biosynthetic process and oxidation-reduction process; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: GEAM_3693
symbol: ntrC
gene_biotype: protein_coding
description:
  Nitrogen regulation protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: GEAM_3694
symbol: GlnL
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(II); Protein involved in ATP binding, phosphorelay sensor kinase activity, signal transducer activity, signal transduction and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3695
symbol: glnA
gene_biotype: protein_coding
description:
  Glutamine synthetase type I; Protein involved in glutamate-ammonia ligase activity, glutamine biosynthetic process, nitrogen compound metabolic process and nitrogen fixation.


ensembl_gene_id: GEAM_3698
symbol: YihX
gene_biotype: protein_coding
description:
  Putative haloacid dehalogenase-like hydrolase; Protein involved in hydrolase activity and metabolic process.


ensembl_gene_id: GEAM_3700
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: GEAM_3703
symbol: xanP
gene_biotype: protein_coding
description:
  Xanthine permease; Protein involved in transporter activity, biological_process, transmembrane transport and transport.


ensembl_gene_id: GEAM_3705
symbol: gltS
gene_biotype: protein_coding
description:
  Sodium/glutamate symport protein; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: GEAM_3706
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: GEAM_3707
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA (guanosine18-2'-O-) -methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: GEAM_3708
symbol: SpoT
gene_biotype: protein_coding
description:
  Guanosine pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: GEAM_3709
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: GEAM_3711
symbol: ligB
gene_biotype: protein_coding
description:
  DNA ligase; Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily.


ensembl_gene_id: GEAM_3716
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: GEAM_3717
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: GEAM_3718
symbol: GEAM_3718
gene_biotype: protein_coding
description:
  Putative membrane protein; Overlaps another CDS with the same product name; Protein involved in biological_process.


ensembl_gene_id: GEAM_3720
symbol: slmA
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.


ensembl_gene_id: GEAM_3721
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: GEAM_3722
symbol: dfp
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: GEAM_3725
symbol: rpmG
gene_biotype: protein_coding
description:
  L33p family LSU ribosomal protein; Protein involved in structural constituent of ribosome and translation; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: GEAM_3726
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: GEAM_3727
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: GEAM_3729
symbol: WaaA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: GEAM_3730
symbol: GEAM_3730
gene_biotype: protein_coding
description:
  ADP-heptose--lipooligosaccharide heptosyltransferase II; Protein involved in transferase activity, transferring glycosyl groups and metabolic process.


ensembl_gene_id: GEAM_3733
symbol: rfaQ
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase III; Protein involved in transferase activity, transferring glycosyl groups and metabolic process.


ensembl_gene_id: GEAM_3734
symbol: GEAM_3734
gene_biotype: protein_coding
description:
  WalW family lipopolysaccharide biosynthesis protein; Protein involved in catalytic activity and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3739
symbol: rfaC
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase I; Protein involved in transferase activity, transferring glycosyl groups, lipopolysaccharide heptosyltransferase activity, lipopolysaccharide core region biosynthetic process, metabolic process and lipopolysaccharide biosynthetic process.


ensembl_gene_id: GEAM_3740
symbol: rfaF
gene_biotype: protein_coding
description:
  ADP-heptose--lipooligosaccharide heptosyltransferase II; Protein involved in transferase activity, transferring glycosyl groups, lipopolysaccharide core region biosynthetic process, metabolic process and lipopolysaccharide biosynthetic process.


ensembl_gene_id: GEAM_3741
symbol: rfaD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: GEAM_3742
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: GEAM_3743
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: GEAM_3744
symbol: GEAM_3744
gene_biotype: protein_coding
description:
  Putative polysaccharide deacetylase; Protein involved in catalytic activity and carbohydrate metabolic process.


ensembl_gene_id: GEAM_3746
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: GEAM_3748
symbol: grxC
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: GEAM_3749
symbol: secB
gene_biotype: protein_coding
description:
  Cytoplasmic protein export chaperone protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: GEAM_3750
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Protein involved in NAD binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, oxidoreductase activity, acting on CH-OH group of donors, glycerol-3-phosphate dehydrogenase [NAD+] activity, glycerol-3-phosphate catabolic process, oxidation-reduction process, carbohydrate metabolic process and glycerol-3-phosphate metabolic process.


ensembl_gene_id: GEAM_3751
symbol: cysE
gene_biotype: protein_coding
description:
  Protein involved in serine O-acetyltransferase activity, transferase activity and cysteine biosynthetic process from serine.


ensembl_gene_id: GEAM_3752
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA (cytosine34-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: GEAM_3753
symbol: CpxA
gene_biotype: protein_coding
description:
  Copper-sensing histidine kinase; Protein involved in phosphorelay sensor kinase activity, signal transducer activity, ATP binding and signal transduction.


ensembl_gene_id: GEAM_3754
symbol: CpxR
gene_biotype: protein_coding
description:
  Copper-sensing two-component system response regulator; Protein involved in phosphorelay response regulator activity, DNA binding, regulation of transcription, DNA-templated and phosphorelay signal transduction system.


ensembl_gene_id: GEAM_3756
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: GEAM_3758
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: GEAM_3763
symbol: glpX
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase; Protein involved in fructose 1,6-bisphosphate 1-phosphatase activity, gluconeogenesis and glycerol metabolic process.


ensembl_gene_id: GEAM_3764
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: GEAM_3765
symbol: GEAM_3765
gene_biotype: protein_coding
description:
  Glycerol uptake facilitator protein; Protein involved in transporter activity, biological_process and transport; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: GEAM_3766
symbol: zapB
gene_biotype: protein_coding
description:
  Putative cytoplasmic protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.


ensembl_gene_id: GEAM_3767
symbol: rraA
gene_biotype: protein_coding
description:
  Ribonuclease E inhibitor; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.


ensembl_gene_id: GEAM_3768
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: GEAM_3769
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: GEAM_3770
symbol: HslV
gene_biotype: protein_coding
description:
  ATP-dependent protease; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: GEAM_3771
symbol: ftsN
gene_biotype: protein_coding
description:
  FtsN family cell division protein; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases.


ensembl_gene_id: GEAM_3772
symbol: CytR
gene_biotype: protein_coding
description:
  CytR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3773
symbol: priA
gene_biotype: protein_coding
description:
  DNA helicase; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: GEAM_3775
symbol: metJ
gene_biotype: protein_coding
description:
  MetJ family methionine repressor; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family.


ensembl_gene_id: GEAM_3777
symbol: GEAM_3777
gene_biotype: protein_coding
description:
  Aspartokinase/homoserine dehydrogenase; Protein involved in NADP binding, oxidoreductase activity, oxidation-reduction process, cellular amino acid metabolic process and cellular amino acid biosynthetic process; In the C-terminal section; belongs to the homoserine dehydrogenase family.


ensembl_gene_id: GEAM_3778
symbol: metF
gene_biotype: protein_coding
description:
  Protein involved in methylenetetrahydrofolate reductase (NAD(P)H) activity, methionine biosynthetic process, oxidation-reduction process and methionine metabolic process.


ensembl_gene_id: GEAM_3779
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: GEAM_3780
symbol: argE
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Protein involved in hydrolase activity, zinc ion binding, acetylornithine deacetylase activity, cobalt ion binding, ornithine biosynthetic process, metabolic process and arginine biosynthetic process.


ensembl_gene_id: GEAM_3781
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: GEAM_3783
symbol: argG
gene_biotype: protein_coding
description:
  Protein involved in ATP binding, argininosuccinate synthase activity, arginine biosynthetic process via ornithine and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: GEAM_3784
symbol: argH
gene_biotype: protein_coding
description:
  Protein involved in argininosuccinate lyase activity, catalytic activity and arginine biosynthetic process via ornithine.


ensembl_gene_id: GEAM_3785
symbol: GEAM_3785
gene_biotype: protein_coding
description:
  Peroxiredoxin family protein/glutaredoxin; Protein involved in oxidoreductase activity, protein disulfide oxidoreductase activity, electron carrier activity and cell redox homeostasis.


ensembl_gene_id: GEAM_3787
symbol: sthA
gene_biotype: protein_coding
description:
  Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: GEAM_3788
symbol: fabR
gene_biotype: protein_coding
description:
  TetR family unsaturated fatty acid biosynthesis repressor; Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer.


ensembl_gene_id: GEAM_3790
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil54-C5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: GEAM_3791
symbol: btuB
gene_biotype: protein_coding
description:
  Outer membrane vitamin B12 receptor; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.


ensembl_gene_id: GEAM_3794
symbol: hdfR
gene_biotype: protein_coding
description:
  HdfR family HTH-type transcriptional regulator; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.


ensembl_gene_id: GEAM_3796
symbol: GEAM_3796
gene_biotype: protein_coding
description:
  Protein involved in magnesium chelatase activity, nucleotide binding, nucleoside-triphosphatase activity, photosynthesis and chlorophyll biosynthetic process.


ensembl_gene_id: GEAM_3798
symbol: ilvG
gene_biotype: protein_coding
description:
  Acetolactate synthase large subunit; Protein involved in magnesium ion binding, thiamine pyrophosphate binding, catalytic activity, acetolactate synthase activity, flavin adenine dinucleotide binding, isoleucine biosynthetic process, valine biosynthetic process and branched-chain amino acid biosynthetic process.


ensembl_gene_id: GEAM_3800
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: GEAM_3801
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Protein involved in catalytic activity, dihydroxy-acid dehydratase activity, isoleucine biosynthetic process, valine biosynthetic process, metabolic process and branched-chain amino acid biosynthetic process; Belongs to the IlvD/Edd family.


ensembl_gene_id: GEAM_3802
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: GEAM_3803
symbol: IlvY
gene_biotype: protein_coding
description:
  IlvY family HTH-type transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_3804
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: GEAM_3806
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: GEAM_3807
symbol: gppA
gene_biotype: protein_coding
description:
  Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.


ensembl_gene_id: GEAM_3808
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: GEAM_3809
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin; Protein involved in protein disulfide oxidoreductase activity, electron carrier activity, (OBSOLETE) electron transport, cell redox homeostasis and glycerol ether metabolic process; Belongs to the thioredoxin family.


ensembl_gene_id: GEAM_3810
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: GEAM_3812
symbol: wzzE
gene_biotype: protein_coding
description:
  O-antigen lipopolysaccharide chain length regulator; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.


ensembl_gene_id: GEAM_3813
symbol: wecB
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues.


ensembl_gene_id: GEAM_3814
symbol: wecC
gene_biotype: protein_coding
description:
  UDP-glucose dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.


ensembl_gene_id: GEAM_3815
symbol: wecD
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.


ensembl_gene_id: GEAM_3816
symbol: wecE
gene_biotype: protein_coding
description:
  4-keto-6-deoxy-N-acetyl-D-hexosaminyl-(lipid carrier) aminotransferase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: GEAM_3817
symbol: wzxE
gene_biotype: protein_coding
description:
  WzxE family protein; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.


ensembl_gene_id: GEAM_3818
symbol: wecF
gene_biotype: protein_coding
description:
  4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.


ensembl_gene_id: GEAM_3819
symbol: wzyE
gene_biotype: protein_coding
description:
  Putative ECA polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.


ensembl_gene_id: GEAM_3820
symbol: wecG
gene_biotype: protein_coding
description:
  Putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.


ensembl_gene_id: GEAM_3821
symbol: GEAM_3821
gene_biotype: protein_coding
description:
  Putative transport protein; Protein involved in amino acid transmembrane transporter activity, biological_process, transport, transmembrane transport and amino acid transmembrane transport.


ensembl_gene_id: GEAM_3828
symbol: HemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: GEAM_3829
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: GEAM_3830
symbol: GEAM_3830
gene_biotype: protein_coding
description:
  Protein involved in adenylate cyclase activity and cAMP biosynthetic process; Belongs to the adenylyl cyclase class-1 family.


ensembl_gene_id: GEAM_3832
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: GEAM_3834
symbol: xerC
gene_biotype: protein_coding
description:
  XerC family tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifically exch [...]


ensembl_gene_id: GEAM_3835
symbol: YigB
gene_biotype: protein_coding
description:
  2-haloalkanoic acid dehalogenase; Protein involved in phosphoglycolate phosphatase activity, hydrolase activity and metabolic process.


ensembl_gene_id: GEAM_3836
symbol: uvrD
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Protein involved in ATP binding, hydrolase activity, ATP-dependent DNA helicase activity, DNA binding, DNA repair and DNA unwinding involved in DNA replication.


ensembl_gene_id: GEAM_3838
symbol: corA
gene_biotype: protein_coding
description:
  CorA family magnesium/cobalt transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: GEAM_3842
symbol: PldA
gene_biotype: protein_coding
description:
  Outer membrane phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: GEAM_3843
symbol: recQ
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Protein involved in nucleic acid binding, ATP binding, helicase activity, ATP-dependent helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent DNA helicase activity, nucleotide binding, catalytic activity, DNA recombination, DNA repair, DNA replication, SOS response and cellular metabolic process.


ensembl_gene_id: GEAM_3845
symbol: RhtB
gene_biotype: protein_coding
description:
  Homoserine/homoserine lactone efflux protein; Protein involved in biological_process and amino acid transport.


ensembl_gene_id: GEAM_3847
symbol: YigL
gene_biotype: protein_coding
description:
  HAD superfamily hydrolase; FIG01289452; Protein involved in hydrolase activity, catalytic activity and metabolic process.


ensembl_gene_id: GEAM_3849
symbol: glpT
gene_biotype: protein_coding
description:
  Protein involved in transporter activity, glycerol-3-phosphate transmembrane transporter activity, glycerol-3-phosphate transport, transmembrane transport and transport.


ensembl_gene_id: GEAM_3851
symbol: GEAM_3851
gene_biotype: protein_coding
description:
  Putative preQ0 transporter; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: GEAM_3852
symbol: tusA
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine synthase; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis o [...]


ensembl_gene_id: GEAM_3853
symbol: zntA
gene_biotype: protein_coding
description:
  Heavy metal transporting ATPase; Protein involved in catalytic activity, metal ion binding, nucleotide binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding, cadmium ion transport, metabolic process, metal ion transport, ATP biosynthetic process and cation transport.


ensembl_gene_id: GEAM_3857
symbol: RsmD
gene_biotype: protein_coding
description:
  16S rRNA guanine-N(2)-methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: GEAM_3858
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: GEAM_3859
symbol: ftsE
gene_biotype: protein_coding
description:
  FtsE family cell division transporter ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: GEAM_3860
symbol: ftsX
gene_biotype: protein_coding
description:
  FtsX family cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: GEAM_3861
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: GEAM_3862
symbol: panZ
gene_biotype: protein_coding
description:
  Putative acetyltransferase; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.


ensembl_gene_id: GEAM_3864
symbol: LivH
gene_biotype: protein_coding
description:
  High-affinity branched-chain amino acid transport system permease protein; TC:3.A.1.4.1; Protein involved in transporter activity, biological_process and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3865
symbol: GEAM_3865
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; TC:3.A.1.4.1; Protein involved in transporter activity, biological_process and transport; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GEAM_3866
symbol: GEAM_3866
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport ATP-binding protein; TC:3.A.1.4.1; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_3867
symbol: LivF
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport ATP-binding protein; TC:3.A.1.4.1; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity; Belongs to the ABC transporter superfamily.


ensembl_gene_id: GEAM_3868
symbol: UgpB
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily glycerol-3-phosphate transporter; TC:3.A.1.1.3.


ensembl_gene_id: GEAM_3869
symbol: UgpA
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily glycerol-3-phosphate transporter; TC:3.A.1.1.3; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_3870
symbol: ugpE
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily glycerol-3-phosphate transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: GEAM_3871
symbol: ugpC
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily glycerol-3-phosphate transporter; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.


ensembl_gene_id: GEAM_3878
symbol: metR
gene_biotype: protein_coding
description:
  Homocysteine-binding transcriptional activator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_3879
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: GEAM_3880
symbol: GEAM_3880
gene_biotype: protein_coding
description:
  Putative regulator; Protein involved in phosphorelay response regulator activity, sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding, phosphorelay signal transduction system and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_3885
symbol: GEAM_3885
gene_biotype: protein_coding
description:
  Protein involved in lysozyme activity, cell wall macromolecule catabolic process and peptidoglycan catabolic process.


ensembl_gene_id: GEAM_3891
symbol: udp
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: GEAM_3895
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: GEAM_3897
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis monooxygenase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: GEAM_3898
symbol: tatA
gene_biotype: protein_coding
description:
  TatA family twin-arginine translocation protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: GEAM_3899
symbol: tatB
gene_biotype: protein_coding
description:
  TatB family twin-arginine translocation protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: GEAM_3900
symbol: tatC
gene_biotype: protein_coding
description:
  TatC family twin-arginine translocation protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: GEAM_3901
symbol: tatD
gene_biotype: protein_coding
description:
  TatD family deoxyribonuclease; 3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair. Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. TatD subfamily.


ensembl_gene_id: GEAM_3902
symbol: rfaH
gene_biotype: protein_coding
description:
  Transcriptional activator; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains.


ensembl_gene_id: GEAM_3903
symbol: PepE
gene_biotype: protein_coding
description:
  Alpha-aspartyl dipeptidase; Protein involved in serine-type peptidase activity and proteolysis; Belongs to the peptidase S51 family.


ensembl_gene_id: GEAM_3904
symbol: ubiD
gene_biotype: protein_coding
description:
  3-polyprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: GEAM_3907
symbol: fadB
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase/isomerase/dehydrogenase/epimerase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: GEAM_3910
symbol: TrkH
gene_biotype: protein_coding
description:
  Potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: GEAM_3913
symbol: birA
gene_biotype: protein_coding
description:
  Biotin-protein ligase/biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: GEAM_3914
symbol: coaA
gene_biotype: protein_coding
description:
  Protein involved in kinase activity, ATP binding, pantothenate kinase activity, metabolic process and coenzyme A biosynthetic process.


ensembl_gene_id: GEAM_3920
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase complex SecE family subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: GEAM_3921
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination; Bel [...]


ensembl_gene_id: GEAM_3922
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11p (L12e); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: GEAM_3923
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1p (L10Ae); Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: GEAM_3924
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: GEAM_3925
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: GEAM_3926
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: GEAM_3927
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: GEAM_3928
symbol: thiH
gene_biotype: protein_coding
description:
  Thiazole biosynthesis protein; Protein involved in iron-sulfur cluster binding, 4 iron, 4 sulfur cluster binding, iron ion binding, thiamine biosynthetic process and cofactor metabolic process.


ensembl_gene_id: GEAM_3929
symbol: thiG
gene_biotype: protein_coding
description:
  ThiG family thiazole biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: GEAM_3932
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: GEAM_3933
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine phosphate synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: GEAM_3934
symbol: rsd
gene_biotype: protein_coding
description:
  Sigma D regulatory protein; Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase.


ensembl_gene_id: GEAM_3935
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Protein involved in hydrolase activity and metal ion binding; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: GEAM_3936
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: GEAM_3937
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: GEAM_3939
symbol: hupA
gene_biotype: protein_coding
description:
  HU family DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: GEAM_3941
symbol: purD
gene_biotype: protein_coding
description:
  Protein involved in phosphoribosylamine-glycine ligase activity, 'de novo' IMP biosynthetic process, purine ribonucleotide biosynthetic process and purine nucleobase biosynthetic process; Belongs to the GARS family.


ensembl_gene_id: GEAM_3942
symbol: purH
gene_biotype: protein_coding
description:
  Protein involved in IMP cyclohydrolase activity, phosphoribosylaminoimidazolecarboxamide formyltransferase activity, catalytic activity, purine ribonucleotide biosynthetic process and purine nucleotide biosynthetic process.


ensembl_gene_id: GEAM_3943
symbol: actP
gene_biotype: protein_coding
description:
  Cation:acetate symporter; Transports acetate; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: GEAM_3945
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: GEAM_3947
symbol: GEAM_3947
gene_biotype: protein_coding
description:
  Outer membrane usher protein; Protein involved in protein binding, transporter activity and transport.


ensembl_gene_id: GEAM_3952
symbol: GEAM_3952
gene_biotype: protein_coding
description:
  CadC family transcriptional regulator; Protein involved in phosphorelay response regulator activity, DNA binding, regulation of transcription, DNA-templated and phosphorelay signal transduction system.


ensembl_gene_id: GEAM_3956
symbol: dsbD
gene_biotype: protein_coding
description:
  Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: GEAM_3957
symbol: GEAM_3957
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.


ensembl_gene_id: GEAM_3958
symbol: aspA
gene_biotype: protein_coding
description:
  Protein involved in lyase activity, aspartate ammonia-lyase activity, catalytic activity, cellular amino acid metabolic process, tricarboxylic acid cycle and aspartate metabolic process.


ensembl_gene_id: GEAM_3960
symbol: groS
gene_biotype: protein_coding
description:
  Heat shock protein 60 family co-chaperone; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: GEAM_3961
symbol: groL
gene_biotype: protein_coding
description:
  Heat shock protein 60 family chaperone; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: GEAM_3963
symbol: EpmB
gene_biotype: protein_coding
description:
  Lysine 2,3-aminomutase; Protein involved in catalytic activity, iron-sulfur cluster binding and (OBSOLETE) electron transport.


ensembl_gene_id: GEAM_3964
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: GEAM_3967
symbol: Blc
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.


ensembl_gene_id: GEAM_3968
symbol: frdD
gene_biotype: protein_coding
description:
  Fumarate reductase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.


ensembl_gene_id: GEAM_3969
symbol: frdC
gene_biotype: protein_coding
description:
  Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.


ensembl_gene_id: GEAM_3971
symbol: frdA
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Protein involved in oxidoreductase activity, oxidoreductase activity, acting on the CH-CH group of donors, flavin adenine dinucleotide binding, anaerobic respiration, oxidation-reduction process and electron transport chain.


ensembl_gene_id: GEAM_3972
symbol: epmA
gene_biotype: protein_coding
description:
  Translation elongation factor P Lys34:lysine transferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily.


ensembl_gene_id: GEAM_3974
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: GEAM_3975
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-stimulated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: GEAM_3976
symbol: orn
gene_biotype: protein_coding
description:
  3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: GEAM_3980
symbol: queG
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: GEAM_3981
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)HX epimerase/NAD(P)HX dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...]


ensembl_gene_id: GEAM_3983
symbol: AmiB
gene_biotype: protein_coding
description:
  Protein involved in N-acetylmuramoyl-L-alanine amidase activity, cell wall macromolecule catabolic process and peptidoglycan catabolic process.


ensembl_gene_id: GEAM_3984
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: GEAM_3985
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: GEAM_3986
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: GEAM_3987
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: GEAM_3991
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: GEAM_3992
symbol: nsrR
gene_biotype: protein_coding
description:
  Nitrite-sensitive transcriptional repressor; Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity.


ensembl_gene_id: GEAM_3993
symbol: rnr
gene_biotype: protein_coding
description:
  3'-to-5' exoribonuclease RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily.


ensembl_gene_id: GEAM_3994
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (guanosine-2'-O-)-methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.


ensembl_gene_id: GEAM_3995
symbol: GEAM_3995
gene_biotype: protein_coding
description:
  Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, acyl-CoA dehydrogenase activity, oxidation-reduction process and metabolic process.


ensembl_gene_id: GEAM_3997
symbol: GEAM_3997
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; Protein involved in signal transducer activity and signal transduction.


ensembl_gene_id: GEAM_4000
symbol: priB
gene_biotype: protein_coding
description:
  Primosomal protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: GEAM_4001
symbol: rpsR
gene_biotype: protein_coding
description:
  S18p family SSU ribosomal protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: GEAM_4005
symbol: cpdB
gene_biotype: protein_coding
description:
  Protein involved in hydrolase activity, 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity, nucleobase-containing compound metabolic process, nucleotide catabolic process and nucleotide metabolic process; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: GEAM_4006
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: GEAM_4009
symbol: GEAM_4009
gene_biotype: protein_coding
description:
  Protein involved in DNA-3-methyladenine glycosylase activity, catalytic activity, base-excision repair and DNA repair.


ensembl_gene_id: GEAM_4010
symbol: GEAM_4010
gene_biotype: protein_coding
description:
  Putative membrane protein; Protein involved in protein binding, catalytic activity, oxidoreductase activity, acting on CH-OH group of donors, flavin adenine dinucleotide binding, biological_process and oxidation-reduction process.


ensembl_gene_id: GEAM_4015
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: GEAM_4017
symbol: fbp
gene_biotype: protein_coding
description:
  Type I fructose-1,6-bisphosphatase; Protein involved in fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity and carbohydrate metabolic process; Belongs to the FBPase class 1 family.


ensembl_gene_id: GEAM_4018
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: GEAM_4025
symbol: IspB
gene_biotype: protein_coding
description:
  Octaprenyl-diphosphate synthase; Protein involved in isoprenoid biosynthetic process; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: GEAM_4026
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: GEAM_4027
symbol: rpmA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L27p; Protein involved in structural constituent of ribosome and translation; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: GEAM_4029
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: GEAM_4031
symbol: PmrA
gene_biotype: protein_coding
description:
  BasR/PmrA family transcriptional regulator; Protein involved in phosphorelay response regulator activity, DNA binding, phosphorelay signal transduction system and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_4032
symbol: dacB
gene_biotype: protein_coding
description:
  Protein involved in serine-type carboxypeptidase activity, peptidoglycan biosynthetic process and proteolysis.


ensembl_gene_id: GEAM_4033
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: GEAM_4035
symbol: rrmJ
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: GEAM_4036
symbol: hflB
gene_biotype: protein_coding
description:
  Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: GEAM_4037
symbol: folP
gene_biotype: protein_coding
description:
  Protein involved in dihydropteroate synthase activity, folic acid-containing compound biosynthetic process, pteridine-containing compound metabolic process and cellular metabolic process.


ensembl_gene_id: GEAM_4038
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: GEAM_4039
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: GEAM_4042
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: GEAM_4043
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination protein; Participates in both transcription termination and antitermination.


ensembl_gene_id: GEAM_4044
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: GEAM_4045
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: GEAM_4046
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: GEAM_4047
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: GEAM_4048
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: GEAM_4050
symbol: deaD
gene_biotype: protein_coding
description:
  Cold-shock DEAD-box protein A; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: GEAM_4051
symbol: GEAM_4051
gene_biotype: protein_coding
description:
  Putative luciferase; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen and oxidation-reduction process.


ensembl_gene_id: GEAM_4060
symbol: GEAM_4060
gene_biotype: protein_coding
description:
  Acetyltransferase; FIG001353; Protein involved in N-acetyltransferase activity and biological_process.


ensembl_gene_id: GEAM_4063
symbol: GEAM_4063
gene_biotype: protein_coding
description:
  GSP18 family general stress protein; Protein involved in hydrolase activity, acting on glycosyl bonds and proteolysis.


ensembl_gene_id: GEAM_4064
symbol: GEAM_4064
gene_biotype: protein_coding
description:
  Oxidoreductase; Protein involved in oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, NAD binding, oxidation-reduction process and cellular amino acid metabolic process.


ensembl_gene_id: GEAM_4065
symbol: phnP
gene_biotype: protein_coding
description:
  Beta-lactamase superfamily I metal-dependent hydrolase; Protein involved in phosphoric diester hydrolase activity and organic phosphonate catabolic process.


ensembl_gene_id: GEAM_4067
symbol: phnN
gene_biotype: protein_coding
description:
  PhnN family ATP-binding protein/guanylate kinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).


ensembl_gene_id: GEAM_4068
symbol: phnM
gene_biotype: protein_coding
description:
  Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, organic phosphonate metabolic process and organic phosphonate catabolic process.


ensembl_gene_id: GEAM_4069
symbol: phnL
gene_biotype: protein_coding
description:
  PhnL family phosphonate transport ATP-binding protein; Protein involved in ATPase activity, ATP binding, nucleotide binding, nucleoside-triphosphatase activity and organic phosphonate metabolic process.


ensembl_gene_id: GEAM_4070
symbol: phnK
gene_biotype: protein_coding
description:
  PhnK family phosphonate transport ATP-binding protein; Protein involved in ATP binding, nucleotide binding, ATPase activity, nucleoside-triphosphatase activity, organic phosphonate metabolic process and peptide transport.


ensembl_gene_id: GEAM_4071
symbol: GEAM_4071
gene_biotype: protein_coding
description:
  PhnJ family protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: GEAM_4074
symbol: phnG
gene_biotype: protein_coding
description:
  PhnG family protein; Protein involved in organic phosphonate transport and organic phosphonate metabolic process.


ensembl_gene_id: GEAM_4075
symbol: phnF
gene_biotype: protein_coding
description:
  PhnF family transcriptional regulator; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, organic phosphonate transport and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_4078
symbol: nrdG
gene_biotype: protein_coding
description:
  Class III (anaerobic) ribonucleotide reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: GEAM_4079
symbol: nrdD
gene_biotype: protein_coding
description:
  Class III (anaerobic) ribonucleotide reductase, large subunit; Protein involved in ribonucleoside-triphosphate reductase activity, oxidoreductase activity, 2'-deoxyribonucleotide biosynthetic process, DNA replication and oxidation-reduction process.


ensembl_gene_id: GEAM_4081
symbol: treC
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate hydrolase; Protein involved in cation binding, catalytic activity, alpha,alpha-phosphotrehalase activity, trehalose metabolic process, carbohydrate metabolic process and trehalose catabolic process.


ensembl_gene_id: GEAM_4082
symbol: treB
gene_biotype: protein_coding
description:
  PTS system trehalose-specific IIBC components; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, sugar:hydrogen symporter activity, trehalose transmembrane transporter activity, biological_process, phosphoenolpyruvate-dependent sugar phosphotransferase system, trehalose transport and transport.


ensembl_gene_id: GEAM_4083
symbol: treR
gene_biotype: protein_coding
description:
  Trehalose operon transcriptional repressor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding, carbohydrate metabolic process, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated and trehalose metabolic process.


ensembl_gene_id: GEAM_4084
symbol: mgtA
gene_biotype: protein_coding
description:
  Magnesium transporting ATPase; Protein involved in nucleotide binding, metal ion binding, catalytic activity, magnesium-importing ATPase activity, ATP binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, magnesium ion transport, metabolic process, ATP biosynthetic process and cation transport.


ensembl_gene_id: GEAM_4085
symbol: GEAM_4085
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds and carbohydrate metabolic process.


ensembl_gene_id: GEAM_4086
symbol: GEAM_4086
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily molybdenum transporter; TC:3.A.1.8.1; Protein involved in transporter activity, biological_process and transport.


ensembl_gene_id: GEAM_4089
symbol: sstT
gene_biotype: protein_coding
description:
  Sodium:dicarboxylate symporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: GEAM_4094
symbol: rlmG
gene_biotype: protein_coding
description:
  23S rRNA (guanine-N-2-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.


ensembl_gene_id: GEAM_4095
symbol: GEAM_4095
gene_biotype: protein_coding
description:
  Protein involved in FMN binding, oxidoreductase activity, flavin adenine dinucleotide binding and oxidation-reduction process.


ensembl_gene_id: GEAM_4096
symbol: GEAM_4096
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase/carnithine racemase; Protein involved in catalytic activity and metabolic process.


ensembl_gene_id: GEAM_4098
symbol: BglX
gene_biotype: protein_coding
description:
  Periplasmic beta-glucosidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: GEAM_4100
symbol: malT
gene_biotype: protein_coding
description:
  Maltose regulon transcriptional activator; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box.


ensembl_gene_id: GEAM_4103
symbol: GEAM_4103
gene_biotype: protein_coding
description:
  Sensory box/GGDEF family protein; Protein involved in phosphorus-oxygen lyase activity, regulation of signal transduction, intracellular signal transduction and cyclic nucleotide biosynthetic process.


ensembl_gene_id: GEAM_4105
symbol: GEAM_4105
gene_biotype: protein_coding
description:
  Guanine-hypoxanthine permease; Protein involved in transporter activity, biological_process, transmembrane transport and transport.


ensembl_gene_id: GEAM_4114
symbol: tftE
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Protein involved in oxidoreductase activity, metal ion binding, 2,4,5-trichlorophenoxyacetic acid catabolic process and oxidation-reduction process.


ensembl_gene_id: GEAM_4115
symbol: GEAM_4115
gene_biotype: protein_coding
description:
  Intradiol ring-cleavage dioxygenase; Protein involved in catechol 1,2-dioxygenase activity, iron ion binding, catalytic activity, ferric iron binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, catechol-containing compound metabolic process, oxidation-reduction process and cellular aromatic compound metabolic process.


ensembl_gene_id: GEAM_4122
symbol: csaA
gene_biotype: protein_coding
description:
  CsaA family protein secretion chaperonin; Protein involved in tRNA binding, protein secretion and protein stabilization.


ensembl_gene_id: GEAM_4126
symbol: GEAM_4126
gene_biotype: protein_coding
description:
  Transcriptional regulator; Protein involved in carbohydrate binding, sequence-specific DNA binding transcription factor activity, DNA binding, carbohydrate metabolic process and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_4127
symbol: GEAM_4127
gene_biotype: protein_coding
description:
  Agmatinase; Protein involved in metal ion binding and hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines; Belongs to the arginase family.


ensembl_gene_id: GEAM_4134
symbol: GEAM_4134
gene_biotype: protein_coding
description:
  Coenzyme F420-dependent NADP oxidoreductase; FIG00905813; Protein involved in oxidoreductase activity and oxidation-reduction process.


ensembl_gene_id: GEAM_4137
symbol: GEAM_4137
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase; Protein involved in oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: GEAM_4140
symbol: GEAM_4140
gene_biotype: protein_coding
description:
  Putative cation efflux system protein; Protein involved in antiporter activity, drug transmembrane transporter activity, drug transmembrane transport, response to drug and transmembrane transport.


ensembl_gene_id: GEAM_4141
symbol: GEAM_4141
gene_biotype: protein_coding
description:
  Protein involved in oxidoreductase activity, riboflavin reductase (NADPH) activity, FMN binding and oxidation-reduction process.


ensembl_gene_id: GEAM_4143
symbol: GEAM_4143
gene_biotype: protein_coding
description:
  Putative regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_4144
symbol: GEAM_4144
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Protein involved in hydrolase activity; Belongs to the Nudix hydrolase family.


ensembl_gene_id: GEAM_4153
symbol: GEAM_4153
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; Protein involved in hydrolase activity and metabolic process.


ensembl_gene_id: GEAM_4164
symbol: GEAM_4164
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily transporter; Protein involved in biological_process and transmembrane transport.


ensembl_gene_id: GEAM_4167
symbol: GEAM_4167
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Protein involved in oxidoreductase activity, oxidation-reduction process and metabolic process; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: GEAM_4168
symbol: GEAM_4168
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase-like protein; Protein involved in isomerase activity, biological_process and cellular aromatic compound metabolic process.


ensembl_gene_id: GEAM_4187
symbol: GEAM_4187
gene_biotype: protein_coding
description:
  Dihydroflavonol-4-reductase; Protein involved in catalytic activity, coenzyme binding and cellular metabolic process.


ensembl_gene_id: GEAM_4192
symbol: GEAM_4192
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_4203
symbol: GEAM_4203
gene_biotype: protein_coding
description:
  Protein involved in 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity and methionine biosynthetic process.


ensembl_gene_id: GEAM_4210
symbol: GEAM_4210
gene_biotype: protein_coding
description:
  MFS family multidrug efflux protein; Protein involved in transporter activity, biological_process, transmembrane transport and transport.


ensembl_gene_id: GEAM_4212
symbol: arsH
gene_biotype: protein_coding
description:
  ArsH family arsenic resistance protein; Protein involved in response to arsenic-containing substance.


ensembl_gene_id: GEAM_4218
symbol: GEAM_4218
gene_biotype: protein_coding
description:
  Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: GEAM_4225
symbol: GEAM_4225
gene_biotype: protein_coding
description:
  Putative deaminase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds.


ensembl_gene_id: GEAM_4228
symbol: GEAM_4228
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Protein involved in oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: GEAM_4229
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: GEAM_4233
symbol: sotB
gene_biotype: protein_coding
description:
  Putative sugar efflux transporter; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.


ensembl_gene_id: GEAM_4262
symbol: GEAM_4262
gene_biotype: protein_coding
description:
  Phage endolysin; Protein involved in chitinase activity, cell wall macromolecule catabolic process and chitin catabolic process.


ensembl_gene_id: GEAM_4270
symbol: GEAM_4270
gene_biotype: protein_coding
description:
  Holliday junction resolvase/crossover junction endodeoxyribonuclease; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC; Belongs to the rusA family.


ensembl_gene_id: GEAM_4272
symbol: GEAM_4272
gene_biotype: protein_coding
description:
  Putative DNA methylase; Protein involved in DNA binding, site-specific DNA-methyltransferase (adenine-specific) activity and DNA methylation on adenine.


ensembl_gene_id: GEAM_4276
symbol: GEAM_4276
gene_biotype: protein_coding
description:
  DNA recombination-dependent growth factor C; May be involved in recombination. Belongs to the RdgC family.


ensembl_gene_id: GEAM_4282
symbol: GEAM_4282
gene_biotype: protein_coding
description:
  Phage integrase; Protein involved in DNA binding, integrase activity, DNA integration and DNA recombination; Belongs to the 'phage' integrase family.


ensembl_gene_id: GEAM_4286
symbol: GEAM_4286
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily manganese transporter; Protein involved in ATPase activity, coupled to transmembrane movement of substances, ATP binding, biological_process and transport.


ensembl_gene_id: GEAM_4288
symbol: GEAM_4288
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily manganese transporter; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_4289
symbol: GEAM_4289
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily manganese transporter; Protein involved in metal ion binding and metal ion transport; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: GEAM_4290
symbol: MntR
gene_biotype: protein_coding
description:
  Mn-dependent transcriptional regulator; Protein involved in transition metal ion binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_4297
symbol: GEAM_4297
gene_biotype: protein_coding
description:
  Bacterial luciferase family protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen and oxidation-reduction process.


ensembl_gene_id: GEAM_4302
symbol: GEAM_4302
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily transporter; Protein involved in ATPase activity, ATP binding, nucleotide binding, nucleoside-triphosphatase activity and peptide transport; Belongs to the ABC transporter superfamily.


ensembl_gene_id: GEAM_4316
symbol: GEAM_4316
gene_biotype: protein_coding
description:
  Putative periplasmic binding protein; Protein involved in transporter activity, ionotropic glutamate receptor activity, extracellular-glutamate-gated ion channel activity, biological_process and transport.


ensembl_gene_id: GEAM_4317
symbol: GEAM_4317
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily amine transporter; Protein involved in transporter activity, amine transport and transport.


ensembl_gene_id: GEAM_4319
symbol: GEAM_4319
gene_biotype: protein_coding
description:
  Glutamine transport ATP-binding protein; TC:3.A.1.3.2; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_4334
symbol: GEAM_4334
gene_biotype: protein_coding
description:
  Putative glucosamine-fructose-6-phosphate aminotransferase; Protein involved in carbohydrate binding and carbohydrate metabolic process.


ensembl_gene_id: GEAM_4339
symbol: GEAM_4339
gene_biotype: protein_coding
description:
  Integrase; Protein involved in DNA binding, DNA integration and DNA recombination; Belongs to the 'phage' integrase family.


ensembl_gene_id: GEAM_4340
symbol: GEAM_4340
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily iron siderophore transporter; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity.


ensembl_gene_id: GEAM_4341
symbol: GEAM_4341
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily iron siderophore transporter; Protein involved in binding.


ensembl_gene_id: GEAM_4342
symbol: GEAM_4342
gene_biotype: protein_coding
description:
  Permease component of an ABC superfamily iron siderophore transporter; Protein involved in transporter activity and biological_process; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: GEAM_4346
symbol: GEAM_4346
gene_biotype: protein_coding
description:
  Major facilitator superfamily protein; Protein involved in biological_process and transmembrane transport.


ensembl_gene_id: GEAM_4347
symbol: GEAM_4347
gene_biotype: protein_coding
description:
  HTH family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GEAM_4354
symbol: GEAM_4354
gene_biotype: protein_coding
description:
  Threonyl/alanyl tRNA synthetase; Protein involved in nucleotide binding, alanine-tRNA ligase activity, ATP binding and alanyl-tRNA aminoacylation.


ensembl_gene_id: GEAM_4358
symbol: GEAM_4358
gene_biotype: protein_coding
description:
  Putative NADH-dependent flavin oxidoreductase; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process.


ensembl_gene_id: GEAM_4361
symbol: GEAM_4361
gene_biotype: protein_coding
description:
  Protein involved in oxidoreductase activity, zinc ion binding, transferase activity, transferring acyl groups other than amino-acyl groups, biological_process and oxidation-reduction process.


ensembl_gene_id: GEAM_4363
symbol: GEAM_4363
gene_biotype: protein_coding
description:
  Protein involved in molybdenum ion binding, oxidoreductase activity, formate dehydrogenase (NAD+) activity, 4 iron, 4 sulfur cluster binding and oxidation-reduction process; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: GEAM_4365
symbol: GEAM_4365
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Protein involved in N-acetyltransferase activity, sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_4373
symbol: GEAM_4373
gene_biotype: protein_coding
description:
  Putative secretion ATPase; Protein involved in ATP binding, peptidase activity, ATPase activity, ATPase activity, coupled to transmembrane movement of substances, nucleotide binding, nucleoside-triphosphatase activity, biological_process, proteolysis, transport and transmembrane transport.


ensembl_gene_id: GEAM_4382
symbol: GEAM_4382
gene_biotype: protein_coding
description:
  RepA family replication protein; Protein involved in DNA-directed DNA polymerase activity and DNA replication initiation.


ensembl_gene_id: GEAM_4386
symbol: GEAM_4386
gene_biotype: protein_coding
description:
  Periplasmic substrate-binding component of an ABC superfamily polyol transporter; Protein involved in transporter activity and transport.


ensembl_gene_id: GEAM_4389
symbol: GEAM_4389
gene_biotype: protein_coding
description:
  Membrane fusion protein of RND family multidrug efflux pump; Protein involved in transport and transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: GEAM_4393
symbol: GEAM_4393
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Protein involved in sequence-specific DNA binding and DNA binding.


ensembl_gene_id: GEAM_4404
symbol: GEAM_4404
gene_biotype: protein_coding
description:
  FIG00634981; Protein involved in solute:hydrogen antiporter activity, biological_process, transmembrane transport and cation transport.


ensembl_gene_id: GEAM_4414
symbol: GEAM_4414
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase; Protein involved in ATP binding, signal transducer activity, biological_process and signal transduction.


ensembl_gene_id: GEAM_4415
symbol: GEAM_4415
gene_biotype: protein_coding
description:
  Copper-sensing two-component system response regulator; Protein involved in phosphorelay response regulator activity, DNA binding, phosphorelay signal transduction system and regulation of transcription, DNA-templated.


ensembl_gene_id: GEAM_4421
symbol: lldD
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.


ensembl_gene_id: GEAM_4422
symbol: FucP
gene_biotype: protein_coding
description:
  Protein involved in fucose transmembrane transporter activity, fucose transport and transmembrane transport.


ensembl_gene_id: GEAM_4423
symbol: GEAM_4423
gene_biotype: protein_coding
description:
  L-fucose mutarotase, type 2; Protein involved in racemase and epimerase activity, acting on carbohydrates and derivatives and rhamnose metabolic process.


ensembl_gene_id: GEAM_4426
symbol: GEAM_4426
gene_biotype: protein_coding
description:
  L-fuconate dehydratase; Protein involved in catalytic activity and metabolic process; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: GEAM_4427
symbol: GEAM_4427
gene_biotype: protein_coding
description:
  2,4-diketo-3-deoxy-L-fuconate hydrolase; Protein involved in catalytic activity and metabolic process.


ensembl_gene_id: GEAM_4438
symbol: Mtr
gene_biotype: protein_coding
description:
  Protein involved in aromatic amino acid transmembrane transporter activity and aromatic amino acid transport.


ensembl_gene_id: GEAM_4452
symbol: SfnG
gene_biotype: protein_coding
description:
  Flavin-dependent oxidoreductase/sulfonate monooxygenase; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen and oxidation-reduction process.


ensembl_gene_id: GEAM_4453
symbol: GEAM_4453
gene_biotype: protein_coding
description:
  ATP-binding component of an ABC superfamily oligopeptide transporter; TC:3.A.1.5.1; Protein involved in ATP binding, nucleotide binding, ATPase activity, nucleoside-triphosphatase activity and peptide transport; Belongs to the ABC transporter superfamily.


