# geneInfo

ensembl_gene_id: SGRA_0002
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SGRA_0003
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SGRA_0006
symbol: cinA
gene_biotype: protein_coding
description:
  Competence/damage-inducible protein CinA; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.


ensembl_gene_id: SGRA_0009
symbol: SGRA_0009
gene_biotype: protein_coding
description:
  Binding-protein-dependent transport systems inner membrane component; COG4239 ABC-type uncharacterized transport system, permease component.


ensembl_gene_id: SGRA_0013
symbol: SGRA_0013
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit.


ensembl_gene_id: SGRA_0020
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SGRA_0026
symbol: trkA
gene_biotype: protein_coding
description:
  Potassium transporter peripheral membrane component; COG0569 K+ transport systems, NAD-binding component.


ensembl_gene_id: SGRA_0030
symbol: SGRA_0030
gene_biotype: protein_coding
description:
  Peptidase S9B dipeptidylpeptidase IV domain protein; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.


ensembl_gene_id: SGRA_0036
symbol: SGRA_0036
gene_biotype: protein_coding
description:
  ABC transporter related protein; COG4152 ABC-type uncharacterized transport system, ATPase component.


ensembl_gene_id: SGRA_0043
symbol: SGRA_0043
gene_biotype: protein_coding
description:
  Type 4 fimbriae expression regulatory protein pilR; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.


ensembl_gene_id: SGRA_0057
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: SGRA_0062
symbol: SGRA_0062
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.


ensembl_gene_id: SGRA_0072
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SGRA_0074
symbol: SGRA_0074
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SGRA_0089
symbol: gldF
gene_biotype: protein_coding
description:
  Gliding motility protein GldF; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: SGRA_0091
symbol: SGRA_0091
gene_biotype: protein_coding
description:
  Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: SGRA_0095
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SGRA_0097
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SGRA_0099
symbol: rluE
gene_biotype: protein_coding
description:
  Pseudouridine synthase; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SGRA_0103
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SGRA_0104
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SGRA_0116
symbol: atoB
gene_biotype: protein_coding
description:
  acetoacetyl-CoA thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: SGRA_0117
symbol: SGRA_0117
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).


ensembl_gene_id: SGRA_0125
symbol: groEL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SGRA_0126
symbol: groES
gene_biotype: protein_coding
description:
  Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SGRA_0143
symbol: mdaB
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase (quinone); COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).


ensembl_gene_id: SGRA_0144
symbol: SGRA_0144
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SGRA_0152
symbol: SGRA_0152
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SGRA_0153
symbol: SGRA_0153
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis family protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: SGRA_0168
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SGRA_0177
symbol: SGRA_0177
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LytTR family protein; COG3279 Response regulator of the LytR/AlgR family.


ensembl_gene_id: SGRA_0178
symbol: SGRA_0178
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase, LytS; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.


ensembl_gene_id: SGRA_0181
symbol: SGRA_0181
gene_biotype: protein_coding
description:
  AAA ATPase; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.


ensembl_gene_id: SGRA_0195
symbol: SGRA_0195
gene_biotype: protein_coding
description:
  ABC transporter related protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: SGRA_0197
symbol: SGRA_0197
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SGRA_0200
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit scpa; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SGRA_0201
symbol: uppS
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SGRA_0203
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein rimm; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SGRA_0213
symbol: SGRA_0213
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP protein, Csm5 family; COG1332 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).


ensembl_gene_id: SGRA_0214
symbol: SGRA_0214
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP protein, Csm4 family; COG1567 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).


ensembl_gene_id: SGRA_0215
symbol: SGRA_0215
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP Csm3 family protein; COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).


ensembl_gene_id: SGRA_0216
symbol: SGRA_0216
gene_biotype: protein_coding
description:
  Csm2 family CRISPR-associated protein; COG1421 Uncharacterized protein predicted to be involved in DNA repair.


ensembl_gene_id: SGRA_0217
symbol: SGRA_0217
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csm1 family; COG1353 Predicted hydrolase of the HD superfamily (permuted catalytic motifs).


ensembl_gene_id: SGRA_0221
symbol: SGRA_0221
gene_biotype: protein_coding
description:
  ABC transporter related protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.


ensembl_gene_id: SGRA_0249
symbol: phoB1
gene_biotype: protein_coding
description:
  COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: SGRA_0253
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; COG1778 Low specificity phosphatase (HAD superfamily).


ensembl_gene_id: SGRA_0254
symbol: SGRA_0254
gene_biotype: protein_coding
description:
  Geranylgeranylglycerol-phosphate geranylgeranyltransferase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.


ensembl_gene_id: SGRA_0261
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SGRA_0264
symbol: sodA
gene_biotype: protein_coding
description:
  Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SGRA_0277
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SGRA_0278
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: SGRA_0281
symbol: rimJ
gene_biotype: protein_coding
description:
  ribosomal-protein-S5-alanine N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: SGRA_0295
symbol: hsdR
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SGRA_0313
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: SGRA_0314
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: SGRA_0319
symbol: SGRA_0319
gene_biotype: protein_coding
description:
  Membrane bound O-acyl transferase MBOAT family protein; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SGRA_0325
symbol: pgsA
gene_biotype: protein_coding
description:
  Capsule synthesis protein, CapA; COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation).


ensembl_gene_id: SGRA_0328
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SGRA_0337
symbol: prc
gene_biotype: protein_coding
description:
  C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.


ensembl_gene_id: SGRA_0340
symbol: SGRA_0340
gene_biotype: protein_coding
description:
  Esterase/lipase, putative; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: SGRA_0350
symbol: SGRA_0350
gene_biotype: protein_coding
description:
  Vault protein, inter-alpha-trypsin domain-containing protein; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.


ensembl_gene_id: SGRA_0352
symbol: mrp
gene_biotype: protein_coding
description:
  ATP-binding protein, Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SGRA_0360
symbol: SGRA_0360
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.


ensembl_gene_id: SGRA_0377
symbol: sodA-2
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SGRA_0395
symbol: SGRA_0395
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.


ensembl_gene_id: SGRA_0396
symbol: SGRA_0396
gene_biotype: protein_coding
description:
  Membrane bound o-acyl transferase mboat family protein; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SGRA_0410
symbol: SGRA_0410
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: SGRA_0415
symbol: SGRA_0415
gene_biotype: protein_coding
description:
  Putative phosphatidylinositol-4-phosphate 5-kinase; COG4642 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: SGRA_0416
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SGRA_0442
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SGRA_0453
symbol: SGRA_0453
gene_biotype: protein_coding
description:
  CRISPR-associated RAMP protein; COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).


ensembl_gene_id: SGRA_0466
symbol: yaeT
gene_biotype: protein_coding
description:
  Surface antigen variable number repeat protein; COG4775 Outer membrane protein/protective antigen OMA87.


ensembl_gene_id: SGRA_0487
symbol: scpB
gene_biotype: protein_coding
description:
  Condensin subunit scpb; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SGRA_0489
symbol: nnrE
gene_biotype: protein_coding
description:
  Putative sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both ep [...]


ensembl_gene_id: SGRA_0496
symbol: SGRA_0496
gene_biotype: protein_coding
description:
  Von Willebrand factor type A; COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain.


ensembl_gene_id: SGRA_0501
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SGRA_0509
symbol: SGRA_0509
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; COG3491 Isopenicillin N synthase and related dioxygenases; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: SGRA_0516
symbol: SGRA_0516
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen; COG0526 Thiol-disulfide isomerase and thioredoxins.


ensembl_gene_id: SGRA_0523
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: SGRA_0530
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SGRA_0536
symbol: SGRA_0536
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains).


ensembl_gene_id: SGRA_0537
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SGRA_0538
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SGRA_0542
symbol: SGRA_0542
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).


ensembl_gene_id: SGRA_0546
symbol: SGRA_0546
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: SGRA_0548
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SGRA_0552
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SGRA_0572
symbol: pspA
gene_biotype: protein_coding
description:
  pspA/IM30 family protein; COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.


ensembl_gene_id: SGRA_0574
symbol: clpC
gene_biotype: protein_coding
description:
  ATPase AAA-2 domain protein; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SGRA_0577
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SGRA_0580
symbol: SGRA_0580
gene_biotype: protein_coding
description:
  Hypothetical protein; COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.


ensembl_gene_id: SGRA_0593
symbol: SGRA_0593
gene_biotype: protein_coding
description:
  COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.


ensembl_gene_id: SGRA_0601
symbol: serA
gene_biotype: protein_coding
description:
  COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SGRA_0603
symbol: narL
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: SGRA_0616
symbol: SGRA_0616
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: SGRA_0623
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SGRA_0630
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SGRA_0635
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SGRA_0637
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SGRA_0639
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: SGRA_0647
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein s12p methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SGRA_0648
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SGRA_0681
symbol: pilQ
gene_biotype: protein_coding
description:
  Type II and III secretion system protein; COG4796 Type II secretory pathway, component HofQ; Belongs to the bacterial secretin family.


ensembl_gene_id: SGRA_0690
symbol: SGRA_0690
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase zinc-binding domain protein; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.


ensembl_gene_id: SGRA_0696
symbol: SGRA_0696
gene_biotype: protein_coding
description:
  COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: SGRA_0697
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SGRA_0700
symbol: SGRA_0700
gene_biotype: protein_coding
description:
  Dolichol-phosphate mannosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis.


ensembl_gene_id: SGRA_0701
symbol: rsmB
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: SGRA_0702
symbol: SGRA_0702
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SGRA_0703
symbol: SGRA_0703
gene_biotype: protein_coding
description:
  Gcn5-related n-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: SGRA_0704
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SGRA_0706
symbol: SGRA_0706
gene_biotype: protein_coding
description:
  Organic hydroperoxide resistance protein; COG1764 Predicted redox protein, regulator of disulfide bond formation.


ensembl_gene_id: SGRA_0719
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SGRA_0723
symbol: SGRA_0723
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.


ensembl_gene_id: SGRA_0724
symbol: SGRA_0724
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.


ensembl_gene_id: SGRA_0734
symbol: SGRA_0734
gene_biotype: protein_coding
description:
  Peptidase, M56 family/TonB domain protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.


ensembl_gene_id: SGRA_0741
symbol: lpd
gene_biotype: protein_coding
description:
  COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.


ensembl_gene_id: SGRA_0743
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SGRA_0745
symbol: ahcY
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SGRA_0749
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SGRA_0750
symbol: SGRA_0750
gene_biotype: protein_coding
description:
  Cell wall/surface repeat-containing protein; COG5492 Bacterial surface proteins containing Ig-like domains.


ensembl_gene_id: SGRA_0761
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SGRA_0762
symbol: tilS
gene_biotype: protein_coding
description:
  Putative cell-cycle protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SGRA_0764
symbol: SGRA_0764
gene_biotype: protein_coding
description:
  Putative two component, sigma54 specific, transcriptional regulator, Fis family protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.


ensembl_gene_id: SGRA_0766
symbol: parB
gene_biotype: protein_coding
description:
  Putative ParB-like chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.


ensembl_gene_id: SGRA_0777
symbol: mqnD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: SGRA_0784
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SGRA_0787
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SGRA_0788
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD subfamily protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SGRA_0825
symbol: SGRA_0825
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SGRA_0828
symbol: SGRA_0828
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG0526 Thiol-disulfide isomerase and thioredoxins.


ensembl_gene_id: SGRA_0832
symbol: SGRA_0832
gene_biotype: protein_coding
description:
  COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain.


ensembl_gene_id: SGRA_0837
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SGRA_0840
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SGRA_0854
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SGRA_0862
symbol: ribBA
gene_biotype: protein_coding
description:
  Gtp cyclohydrolase ii; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SGRA_0875
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SGRA_0878
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SGRA_0880
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SGRA_0881
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SGRA_0883
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SGRA_0887
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SGRA_0888
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SGRA_0901
symbol: hscA
gene_biotype: protein_coding
description:
  Fe-S protein assembly chaperone HscA; COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.


ensembl_gene_id: SGRA_0902
symbol: rfbD
gene_biotype: protein_coding
description:
  Putative dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SGRA_0903
symbol: rfbC
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SGRA_0912
symbol: rluF
gene_biotype: protein_coding
description:
  Putative ribosomal RNA pseudouridine synthase; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SGRA_0917
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SGRA_0918
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein HSR1-related protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SGRA_0924
symbol: rsmI
gene_biotype: protein_coding
description:
  Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SGRA_0933
symbol: SGRA_0933
gene_biotype: protein_coding
description:
  Phosphopantetheinyl transferase-like protein; COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: SGRA_0935
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SGRA_0936
symbol: SGRA_0936
gene_biotype: protein_coding
description:
  COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.


ensembl_gene_id: SGRA_0938
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SGRA_0940
symbol: SGRA_0940
gene_biotype: protein_coding
description:
  Thioesterase superfamily protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.


ensembl_gene_id: SGRA_0943
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: SGRA_0947
symbol: SGRA_0947
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: SGRA_0963
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SGRA_1008
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SGRA_1009
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SGRA_1018
symbol: hemN
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SGRA_1020
symbol: SGRA_1020
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.


ensembl_gene_id: SGRA_1029
symbol: SGRA_1029
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase D precursor; COG0739 Membrane proteins related to metalloendopeptidases.


ensembl_gene_id: SGRA_1042
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SGRA_1048
symbol: SGRA_1048
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family protein; COG2932 Predicted transcriptional regulator; Belongs to the peptidase S24 family.


ensembl_gene_id: SGRA_1049
symbol: rpoE-4
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SGRA_1058
symbol: SGRA_1058
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: SGRA_1064
symbol: msrB
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.


ensembl_gene_id: SGRA_1074
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SGRA_1075
symbol: mcrB
gene_biotype: protein_coding
description:
  ATPase associated with various cellular activities AAA_5; COG1401 GTPase subunit of restriction endonuclease.


ensembl_gene_id: SGRA_1076
symbol: SGRA_1076
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.


ensembl_gene_id: SGRA_1080
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM family protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SGRA_1083
symbol: ruvX
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SGRA_1084
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SGRA_1099
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SGRA_1110
symbol: astE
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase/aspartoacylase family protein; COG2988 Succinylglutamate desuccinylase.


ensembl_gene_id: SGRA_1115
symbol: SGRA_1115
gene_biotype: protein_coding
description:
  M20/M25/M40 family peptidase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: SGRA_1126
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SGRA_1127
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: SGRA_1128
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SGRA_1130
symbol: SGRA_1130
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: SGRA_1131
symbol: SGRA_1131
gene_biotype: protein_coding
description:
  Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: SGRA_1132
symbol: SGRA_1132
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, Fis family transcriptional regulator; COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain.


ensembl_gene_id: SGRA_1140
symbol: gapA
gene_biotype: protein_coding
description:
  COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SGRA_1144
symbol: SGRA_1144
gene_biotype: protein_coding
description:
  faD-dependent pyridine nucleotide-disulfide oxidoreductase; COG2072 Predicted flavoprotein involved in K+ transport.


ensembl_gene_id: SGRA_1147
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SGRA_1149
symbol: msrB-2
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: SGRA_1151
symbol: SGRA_1151
gene_biotype: protein_coding
description:
  Nucleotidyl transferase; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).


ensembl_gene_id: SGRA_1158
symbol: SGRA_1158
gene_biotype: protein_coding
description:
  Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: SGRA_1161
symbol: relA
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SGRA_1167
symbol: crt
gene_biotype: protein_coding
description:
  COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: SGRA_1178
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: SGRA_1179
symbol: grpE
gene_biotype: protein_coding
description:
  GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: SGRA_1193
symbol: SGRA_1193
gene_biotype: protein_coding
description:
  Chromosome segregation ATPase-like protein; COG3210 Large exoproteins involved in heme utilization or adhesion.


ensembl_gene_id: SGRA_1216
symbol: mtnN
gene_biotype: protein_coding
description:
  Purine or other phosphorylase family 1; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SGRA_1226
symbol: SGRA_1226
gene_biotype: protein_coding
description:
  Von Willebrand factor type A; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.


ensembl_gene_id: SGRA_1250
symbol: SGRA_1250
gene_biotype: protein_coding
description:
  Type 4 fimbriae expression regulatory protein PilR; COG3283 Transcriptional regulator of aromatic amino acids metabolism.


ensembl_gene_id: SGRA_1253
symbol: SGRA_1253
gene_biotype: protein_coding
description:
  Glycosyl transferase, group 1 family protein / moaA/nifB/pqqE family protein; COG0438 Glycosyltransferase.


ensembl_gene_id: SGRA_1255
symbol: SGRA_1255
gene_biotype: protein_coding
description:
  Type 4 fimbriae expression regulatory protein PilR; COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain.


ensembl_gene_id: SGRA_1256
symbol: SGRA_1256
gene_biotype: protein_coding
description:
  GCN5-like N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: SGRA_1258
symbol: talA
gene_biotype: protein_coding
description:
  Putative translaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SGRA_1265
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SGRA_1282
symbol: hupB
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SGRA_1291
symbol: SGRA_1291
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases.


ensembl_gene_id: SGRA_1304
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SGRA_1334
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SGRA_1335
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SGRA_1338
symbol: uvrC
gene_biotype: protein_coding
description:
  Uvrabc system protein c; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SGRA_1344
symbol: mqnC
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SGRA_1357
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SGRA_1381
symbol: SGRA_1381
gene_biotype: protein_coding
description:
  M22 family peptidase; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.


ensembl_gene_id: SGRA_1391
symbol: SGRA_1391
gene_biotype: protein_coding
description:
  Protease do; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.


ensembl_gene_id: SGRA_1393
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SGRA_1398
symbol: cynT
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: SGRA_1401
symbol: SGRA_1401
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SGRA_1402
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-[acyl-carrier- protein]dehydratase; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.


ensembl_gene_id: SGRA_1403
symbol: fabI
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: SGRA_1413
symbol: SGRA_1413
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.


ensembl_gene_id: SGRA_1421
symbol: pcaF
gene_biotype: protein_coding
description:
  Beta-ketoadipyl CoA thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: SGRA_1425
symbol: speB
gene_biotype: protein_coding
description:
  Arginase/agmatinase/formiminoglutamase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: SGRA_1427
symbol: SGRA_1427
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: SGRA_1441
symbol: ubiA
gene_biotype: protein_coding
description:
  COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: SGRA_1443
symbol: SGRA_1443
gene_biotype: protein_coding
description:
  Transcriptional regulator; COG2812 DNA polymerase III, gamma/tau subunits; Belongs to the peptidase S24 family.


ensembl_gene_id: SGRA_1450
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SGRA_1454
symbol: thiE-2
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SGRA_1455
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SGRA_1465
symbol: SGRA_1465
gene_biotype: protein_coding
description:
  Arsenate reductase; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SGRA_1477
symbol: SGRA_1477
gene_biotype: protein_coding
description:
  Dolichyl-phosphate-mannose-protein mannosyltransferase family protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.


ensembl_gene_id: SGRA_1482
symbol: hemK
gene_biotype: protein_coding
description:
  N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; COG2890 Methylase of polypeptide chain release factors.


ensembl_gene_id: SGRA_1488
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SGRA_1496
symbol: metF
gene_biotype: protein_coding
description:
  COG0685 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SGRA_1497
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SGRA_1507
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: SGRA_1508
symbol: coxA
gene_biotype: protein_coding
description:
  Cytochrome-c oxidase; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: SGRA_1509
symbol: coxB
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: SGRA_1514
symbol: SGRA_1514
gene_biotype: protein_coding
description:
  Putative iron-sulfur binding oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.


ensembl_gene_id: SGRA_1523
symbol: gcp
gene_biotype: protein_coding
description:
  UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SGRA_1528
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit.


ensembl_gene_id: SGRA_1543
symbol: prsA
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SGRA_1553
symbol: aat
gene_biotype: protein_coding
description:
  Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SGRA_1563
symbol: SGRA_1563
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase sdr; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SGRA_1571
symbol: ypsC
gene_biotype: protein_coding
description:
  THUMP domain-containing protein; COG0116 Predicted N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.


ensembl_gene_id: SGRA_1579
symbol: SGRA_1579
gene_biotype: protein_coding
description:
  Formyl transferase domain protein; COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN.


ensembl_gene_id: SGRA_1596
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SGRA_1599
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SGRA_1614
symbol: rpoE-5
gene_biotype: protein_coding
description:
  COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SGRA_1618
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SGRA_1635
symbol: SGRA_1635
gene_biotype: protein_coding
description:
  Protease Do; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.


ensembl_gene_id: SGRA_1639
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SGRA_1640
symbol: lpxC
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.


ensembl_gene_id: SGRA_1646
symbol: rpoS
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SGRA_1647
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SGRA_1656
symbol: suhB
gene_biotype: protein_coding
description:
  Inositol monophosphatase; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.


ensembl_gene_id: SGRA_1658
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SGRA_1660
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease p protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SGRA_1661
symbol: SGRA_1661
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SGRA_1667
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SGRA_1679
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: SGRA_1692
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SGRA_1695
symbol: rluD
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase d; COG0564 Pseudouridylate synthases, 23S RNA-specific.


ensembl_gene_id: SGRA_1701
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: SGRA_1709
symbol: fnr
gene_biotype: protein_coding
description:
  CRP family transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: SGRA_1725
symbol: rfbB
gene_biotype: protein_coding
description:
  COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SGRA_1726
symbol: rfbB-2
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein; COG0451 Nucleoside-diphosphate-sugar epimerases.


ensembl_gene_id: SGRA_1732
symbol: SGRA_1732
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-E factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SGRA_1735
symbol: SGRA_1735
gene_biotype: protein_coding
description:
  COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SGRA_1740
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SGRA_1742
symbol: SGRA_1742
gene_biotype: protein_coding
description:
  ABC transporter related protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: SGRA_1750
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SGRA_1752
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: SGRA_1758
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SGRA_1760
symbol: SGRA_1760
gene_biotype: protein_coding
description:
  OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.


ensembl_gene_id: SGRA_1766
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SGRA_1770
symbol: SGRA_1770
gene_biotype: protein_coding
description:
  General stress protein; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).


ensembl_gene_id: SGRA_1771
symbol: ubiD
gene_biotype: protein_coding
description:
  UbiD family decarboxylase; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; Belongs to the UbiD family.


ensembl_gene_id: SGRA_1780
symbol: SGRA_1780
gene_biotype: protein_coding
description:
  Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: SGRA_1781
symbol: SGRA_1781
gene_biotype: protein_coding
description:
  COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SGRA_1787
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase family protein; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.


ensembl_gene_id: SGRA_1793
symbol: SGRA_1793
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SGRA_1815
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SGRA_1819
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SGRA_1820
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SGRA_1821
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SGRA_1822
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SGRA_1824
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SGRA_1825
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SGRA_1826
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SGRA_1828
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SGRA_1829
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SGRA_1830
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SGRA_1831
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SGRA_1832
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein s14p; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: SGRA_1833
symbol: rplE
gene_biotype: protein_coding
description:
  Lsu ribosomal protein l5p; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SGRA_1834
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SGRA_1835
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SGRA_1836
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SGRA_1838
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SGRA_1839
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SGRA_1840
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SGRA_1841
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SGRA_1842
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SGRA_1843
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SGRA_1846
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SGRA_1847
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SGRA_1848
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SGRA_1849
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SGRA_1857
symbol: SGRA_1857
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.


ensembl_gene_id: SGRA_1870
symbol: SGRA_1870
gene_biotype: protein_coding
description:
  Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: SGRA_1874
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SGRA_1881
symbol: SGRA_1881
gene_biotype: protein_coding
description:
  RNA methyltransferase YjfH; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SGRA_1882
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SGRA_1883
symbol: iscU
gene_biotype: protein_coding
description:
  FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: SGRA_1891
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SGRA_1898
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SGRA_1904
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: SGRA_1908
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SGRA_1921
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SGRA_1928
symbol: serA-2
gene_biotype: protein_coding
description:
  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SGRA_1929
symbol: ksgA
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SGRA_1930
symbol: SGRA_1930
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: SGRA_1935
symbol: SGRA_1935
gene_biotype: protein_coding
description:
  LexA DNA-binding protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.


ensembl_gene_id: SGRA_1936
symbol: SGRA_1936
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.


ensembl_gene_id: SGRA_1938
symbol: lptB
gene_biotype: protein_coding
description:
  ABC transporter related protein; COG1137 ABC-type (unclassified) transport system, ATPase component.


ensembl_gene_id: SGRA_1944
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SGRA_1947
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SGRA_1949
symbol: gidB
gene_biotype: protein_coding
description:
  Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SGRA_1958
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SGRA_1965
symbol: SGRA_1965
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; Belongs to the UPF0173 family.


ensembl_gene_id: SGRA_1974
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SGRA_1975
symbol: engA
gene_biotype: protein_coding
description:
  Gtp-binding protein enga; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SGRA_1976
symbol: pfk
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SGRA_1978
symbol: SGRA_1978
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.


ensembl_gene_id: SGRA_1988
symbol: atpC
gene_biotype: protein_coding
description:
  H+-transporting two-sector ATPase, epsilon subunit; COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit).


ensembl_gene_id: SGRA_1989
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SGRA_2001
symbol: SGRA_2001
gene_biotype: protein_coding
description:
  Putative secreted protein containing cyclophilin type peptidyl-prolyl cis-trans isomerase domain; COG1413 FOG: HEAT repeat.


ensembl_gene_id: SGRA_2007
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SGRA_2010
symbol: SGRA_2010
gene_biotype: protein_coding
description:
  Fumarylacetoacetate (FAA) hydrolase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).


ensembl_gene_id: SGRA_2013
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SGRA_2015
symbol: SGRA_2015
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: SGRA_2017
symbol: recA
gene_biotype: protein_coding
description:
  recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SGRA_2019
symbol: SGRA_2019
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.


ensembl_gene_id: SGRA_2021
symbol: SGRA_2021
gene_biotype: protein_coding
description:
  Mov34/MPN/PAD-1 family protein; COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily.


ensembl_gene_id: SGRA_2024
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: SGRA_2027
symbol: argD
gene_biotype: protein_coding
description:
  COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SGRA_2036
symbol: SGRA_2036
gene_biotype: protein_coding
description:
  Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.


ensembl_gene_id: SGRA_2045
symbol: SGRA_2045
gene_biotype: protein_coding
description:
  Glu/Leu/Phe/Val dehydrogenase family protein; COG0334 Glutamate dehydrogenase/leucine dehydrogenase.


ensembl_gene_id: SGRA_2057
symbol: SGRA_2057
gene_biotype: protein_coding
description:
  Mammalian cell entry related domain protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.


ensembl_gene_id: SGRA_2059
symbol: secD
gene_biotype: protein_coding
description:
  Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: SGRA_2061
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SGRA_2064
symbol: dapD
gene_biotype: protein_coding
description:
  COG2171 Tetrahydrodipicolinate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: SGRA_2065
symbol: mltD
gene_biotype: protein_coding
description:
  COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: SGRA_2066
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SGRA_2083
symbol: SGRA_2083
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: SGRA_2085
symbol: pheS
gene_biotype: protein_coding
description:
  COG0016 Phenylalanyl-tRNA synthetase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SGRA_2093
symbol: SGRA_2093
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: SGRA_2098
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SGRA_2116
symbol: rnhA
gene_biotype: protein_coding
description:
  Putative ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.


ensembl_gene_id: SGRA_2123
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SGRA_2126
symbol: SGRA_2126
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: SGRA_2129
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SGRA_2132
symbol: trpG
gene_biotype: protein_coding
description:
  Glutamine amidotransferase of anthranilate synthase; COG0512 Anthranilate/para-aminobenzoate synthases component II.


ensembl_gene_id: SGRA_2140
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SGRA_2142
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase.


ensembl_gene_id: SGRA_2149
symbol: queG
gene_biotype: protein_coding
description:
  Iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: SGRA_2151
symbol: ybeY
gene_biotype: protein_coding
description:
  Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SGRA_2174
symbol: yjfH
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SGRA_2184
symbol: apbE
gene_biotype: protein_coding
description:
  Thiamin biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SGRA_2191
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SGRA_2192
symbol: SGRA_2192
gene_biotype: protein_coding
description:
  Endonuclease/exonuclease/phosphatase family protein; COG3021 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: SGRA_2193
symbol: SGRA_2193
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins.


ensembl_gene_id: SGRA_2210
symbol: SGRA_2210
gene_biotype: protein_coding
description:
  Glycosyltransferase 28 domain protein; COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase.


ensembl_gene_id: SGRA_2220
symbol: glyS1
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SGRA_2227
symbol: hit
gene_biotype: protein_coding
description:
  HIT family protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.


ensembl_gene_id: SGRA_2233
symbol: tadA
gene_biotype: protein_coding
description:
  Cmp/dcmp deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SGRA_2251
symbol: SGRA_2251
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS domain-containing protein; COG0249 Mismatch repair ATPase (MutS family).


ensembl_gene_id: SGRA_2264
symbol: punA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SGRA_2266
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SGRA_2274
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: SGRA_2276
symbol: SGRA_2276
gene_biotype: protein_coding
description:
  KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: SGRA_2278
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family.


ensembl_gene_id: SGRA_2279
symbol: SGRA_2279
gene_biotype: protein_coding
description:
  COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SGRA_2284
symbol: pqqL
gene_biotype: protein_coding
description:
  Peptidase m16 domain protein; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.


ensembl_gene_id: SGRA_2285
symbol: SGRA_2285
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor, sigma-70 family protein; COG1191 DNA-directed RNA polymerase specialized sigma subunit.


ensembl_gene_id: SGRA_2287
symbol: SGRA_2287
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SGRA_2292
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SGRA_2295
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SGRA_2300
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Belongs to the KdsA family.


ensembl_gene_id: SGRA_2303
symbol: tufA
gene_biotype: protein_coding
description:
  Translation elongation factor 1a (ef-1a/ef-tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SGRA_2304
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SGRA_2305
symbol: nusG
gene_biotype: protein_coding
description:
  NusG antitermination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SGRA_2306
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SGRA_2307
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SGRA_2308
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SGRA_2309
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SGRA_2310
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SGRA_2312
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SGRA_2313
symbol: SGRA_2313
gene_biotype: protein_coding
description:
  Transketolase domain protein; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.


ensembl_gene_id: SGRA_2324
symbol: SGRA_2324
gene_biotype: protein_coding
description:
  Appr-1-p processing domain protein; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1.


ensembl_gene_id: SGRA_2326
symbol: pssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine O-phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SGRA_2329
symbol: SGRA_2329
gene_biotype: protein_coding
description:
  Putative deoxyribonucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SGRA_2331
symbol: ilvE
gene_biotype: protein_coding
description:
  COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SGRA_2335
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: SGRA_2336
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SGRA_2337
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SGRA_2338
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: SGRA_2339
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SGRA_2340
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SGRA_2346
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SGRA_2347
symbol: SGRA_2347
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.


ensembl_gene_id: SGRA_2349
symbol: SGRA_2349
gene_biotype: protein_coding
description:
  Phospholipase D/Transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.


ensembl_gene_id: SGRA_2353
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SGRA_2354
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SGRA_2356
symbol: SGRA_2356
gene_biotype: protein_coding
description:
  Two component regulator propeller domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain.


ensembl_gene_id: SGRA_2362
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SGRA_2365
symbol: SGRA_2365
gene_biotype: protein_coding
description:
  Proprotein convertase p; COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases.


ensembl_gene_id: SGRA_2371
symbol: SGRA_2371
gene_biotype: protein_coding
description:
  Phosphoesterase PA-phosphatase related protein; COG0671 Membrane-associated phospholipid phosphatase.


ensembl_gene_id: SGRA_2373
symbol: yidC
gene_biotype: protein_coding
description:
  60 kDa inner membrane insertion protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SGRA_2383
symbol: SGRA_2383
gene_biotype: protein_coding
description:
  Putative vitamin B12 receptor precursor; COG1629 Outer membrane receptor proteins, mostly Fe transport.


ensembl_gene_id: SGRA_2395
symbol: SGRA_2395
gene_biotype: protein_coding
description:
  ECF subfamily RNA polymerase sigma-24 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SGRA_2404
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SGRA_2407
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SGRA_2409
symbol: maf
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SGRA_2411
symbol: uvrA-2
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SGRA_2416
symbol: SGRA_2416
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; COG1813 Predicted transcription factor, homolog of eukaryotic MBF1.


ensembl_gene_id: SGRA_2417
symbol: SGRA_2417
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; COG2932 Predicted transcriptional regulator; Belongs to the peptidase S24 family.


ensembl_gene_id: SGRA_2421
symbol: lolC
gene_biotype: protein_coding
description:
  Lipoprotein releasing system, transmembrane protein, LolC/E family; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.


ensembl_gene_id: SGRA_2422
symbol: SGRA_2422
gene_biotype: protein_coding
description:
  Peptidase M20; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: SGRA_2430
symbol: SGRA_2430
gene_biotype: protein_coding
description:
  Peptidase, M16 family protein; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.


ensembl_gene_id: SGRA_2434
symbol: SGRA_2434
gene_biotype: protein_coding
description:
  Glycosyl transferase family 4; COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SGRA_2436
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SGRA_2437
symbol: nudG
gene_biotype: protein_coding
description:
  Pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.


ensembl_gene_id: SGRA_2441
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SGRA_2450
symbol: SGRA_2450
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: SGRA_2455
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SGRA_2464
symbol: rfbA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SGRA_2476
symbol: serC
gene_biotype: protein_coding
description:
  3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SGRA_2495
symbol: pcm
gene_biotype: protein_coding
description:
  protein-l-isoaspartate(D-aspartate) o-methyltransferase; COG2518 Protein-L-isoaspartate carboxylmethyltransferase.


ensembl_gene_id: SGRA_2498
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SGRA_2500
symbol: SGRA_2500
gene_biotype: protein_coding
description:
  Sigma54 specific transcriptional regulator, Fis family protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.


ensembl_gene_id: SGRA_2506
symbol: mtnA
gene_biotype: protein_coding
description:
  Putative translation initiation factor eIF-2B alpha subunit; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SGRA_2507
symbol: mtnC
gene_biotype: protein_coding
description:
  2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: SGRA_2508
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SGRA_2509
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase ii; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SGRA_2522
symbol: SGRA_2522
gene_biotype: protein_coding
description:
  Putative rhodanese-related sulfurtransferase; COG1054 Predicted sulfurtransferase; Belongs to the UPF0176 family.


ensembl_gene_id: SGRA_2530
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SGRA_2531
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SGRA_2536
symbol: SGRA_2536
gene_biotype: protein_coding
description:
  COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: SGRA_2537
symbol: SGRA_2537
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.


ensembl_gene_id: SGRA_2542
symbol: pdhB
gene_biotype: protein_coding
description:
  Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: SGRA_2545
symbol: SGRA_2545
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SGRA_2568
symbol: hupB-2
gene_biotype: protein_coding
description:
  COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: SGRA_2570
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SGRA_2574
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SGRA_2581
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein a; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: SGRA_2592
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SGRA_2599
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SGRA_2603
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SGRA_2610
symbol: SGRA_2610
gene_biotype: protein_coding
description:
  Flavoprotein NADH-dependent oxidoreductase; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.


ensembl_gene_id: SGRA_2618
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SGRA_2626
symbol: SGRA_2626
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.


ensembl_gene_id: SGRA_2627
symbol: folK
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.


ensembl_gene_id: SGRA_2631
symbol: metH
gene_biotype: protein_coding
description:
  B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: SGRA_2633
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SGRA_2634
symbol: accB
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SGRA_2635
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SGRA_2658
symbol: SGRA_2658
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SGRA_2660
symbol: argK
gene_biotype: protein_coding
description:
  Arginine/ornithine transport system ATPase; COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family.


ensembl_gene_id: SGRA_2666
symbol: sucB
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SGRA_2671
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SGRA_2675
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SGRA_2681
symbol: ahpD
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SGRA_2683
symbol: oxyR
gene_biotype: protein_coding
description:
  Redox-sensitive transcriptional activator OxyR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SGRA_2698
symbol: SGRA_2698
gene_biotype: protein_coding
description:
  Putative ferric aerobactin receptor; COG4771 Outer membrane receptor for ferrienterochelin and colicins.


ensembl_gene_id: SGRA_2700
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SGRA_2703
symbol: SGRA_2703
gene_biotype: protein_coding
description:
  Peptidoglycan-binding lysin domain protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: SGRA_2709
symbol: pcrB
gene_biotype: protein_coding
description:
  Geranylgeranylglyceryl phosphate synthase-like protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).


ensembl_gene_id: SGRA_2710
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SGRA_2716
symbol: dnaB
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SGRA_2729
symbol: SGRA_2729
gene_biotype: protein_coding
description:
  Soluble ligand binding domain protein; COG1596 Periplasmic protein involved in polysaccharide export.


ensembl_gene_id: SGRA_2746
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SGRA_2748
symbol: SGRA_2748
gene_biotype: protein_coding
description:
  Peptidase S8/S53 subtilisin kexin sedolisin; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.


ensembl_gene_id: SGRA_2749
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SGRA_2760
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.


ensembl_gene_id: SGRA_2762
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SGRA_2780
symbol: SGRA_2780
gene_biotype: protein_coding
description:
  Peptidase C14, caspase catalytic subunit p20; COG4642 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: SGRA_2784
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SGRA_2795
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SGRA_2805
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SGRA_2808
symbol: SGRA_2808
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; COG0009 Putative translation factor (SUA5); Belongs to the SUA5 family.


ensembl_gene_id: SGRA_2819
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SGRA_2825
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SGRA_2827
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SGRA_2830
symbol: SGRA_2830
gene_biotype: protein_coding
description:
  Lysyl endopeptidase; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.


ensembl_gene_id: SGRA_2839
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SGRA_2845
symbol: SGRA_2845
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, cpa1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SGRA_2881
symbol: vanX
gene_biotype: protein_coding
description:
  Peptidase m15d vanx d-ala-d-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.


ensembl_gene_id: SGRA_2882
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SGRA_2887
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SGRA_2894
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SGRA_2901
symbol: SGRA_2901
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA.


ensembl_gene_id: SGRA_2905
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SGRA_2908
symbol: SGRA_2908
gene_biotype: protein_coding
description:
  BNR repeat-containing glycosyl hydrolase; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.


ensembl_gene_id: SGRA_2910
symbol: SGRA_2910
gene_biotype: protein_coding
description:
  Uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase; COG0313 Predicted methyltransferases.


ensembl_gene_id: SGRA_2923
symbol: SGRA_2923
gene_biotype: protein_coding
description:
  COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: SGRA_2925
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein roda; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.


ensembl_gene_id: SGRA_2931
symbol: deaD
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain protein; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.


ensembl_gene_id: SGRA_2938
symbol: alr
gene_biotype: protein_coding
description:
  Putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SGRA_2942
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SGRA_2951
symbol: SGRA_2951
gene_biotype: protein_coding
description:
  Endonuclease/exonuclease/phosphatase family protein; COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB).


ensembl_gene_id: SGRA_2957
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SGRA_2963
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SGRA_2979
symbol: SGRA_2979
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.


ensembl_gene_id: SGRA_2985
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SGRA_2992
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SGRA_2999
symbol: SGRA_2999
gene_biotype: protein_coding
description:
  COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.


ensembl_gene_id: SGRA_3033
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SGRA_3039
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SGRA_3041
symbol: mtnD
gene_biotype: protein_coding
description:
  Methionine salvage pathway protein E-2/E-2'; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: SGRA_3043
symbol: fur-2
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.


ensembl_gene_id: SGRA_3045
symbol: nqrA
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SGRA_3046
symbol: nqrB
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SGRA_3047
symbol: nqrC
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SGRA_3048
symbol: nqrD
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit D; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: SGRA_3049
symbol: nqrE
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: SGRA_3050
symbol: nqrF
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: SGRA_3051
symbol: SGRA_3051
gene_biotype: protein_coding
description:
  Fumarylacetoacetase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).


ensembl_gene_id: SGRA_3059
symbol: SGRA_3059
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; COG4559 ABC-type hemin transport system, ATPase component.


ensembl_gene_id: SGRA_3069
symbol: ybaZ
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; COG0350 Methylated DNA-protein cysteine methyltransferase.


ensembl_gene_id: SGRA_3078
symbol: aceF
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SGRA_3090
symbol: SGRA_3090
gene_biotype: protein_coding
description:
  Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.


ensembl_gene_id: SGRA_3095
symbol: SGRA_3095
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein ribd; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SGRA_3102
symbol: dacB
gene_biotype: protein_coding
description:
  D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase; COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4).


ensembl_gene_id: SGRA_3108
symbol: apbE-2
gene_biotype: protein_coding
description:
  Apbe family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SGRA_3116
symbol: rluD-2
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SGRA_3126
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SGRA_3128
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SGRA_3147
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SGRA_3165
symbol: mtnU
gene_biotype: protein_coding
description:
  Putative NAD(P)-binding amidase-type enzyme with nitrilase/N-carbamoyl-D-aminoacid amidohydrolase; COG0388 Predicted amidohydrolase.


ensembl_gene_id: SGRA_3169
symbol: SGRA_3169
gene_biotype: protein_coding
description:
  Transglutaminase domain-containing protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.


ensembl_gene_id: SGRA_3170
symbol: SGRA_3170
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance protein/dioxygenase; COG3324 Predicted enzyme related to lactoylglutathione lyase.


ensembl_gene_id: SGRA_3176
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SGRA_3181
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SGRA_3183
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: SGRA_3190
symbol: surE
gene_biotype: protein_coding
description:
  5'(3')-nucleotidase/polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SGRA_3207
symbol: SGRA_3207
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: SGRA_3208
symbol: SGRA_3208
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: SGRA_3212
symbol: SGRA_3212
gene_biotype: protein_coding
description:
  Switch protein/serine-threonine kinase; COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).


ensembl_gene_id: SGRA_3213
symbol: SGRA_3213
gene_biotype: protein_coding
description:
  Putative anti-sigma regulatory factor, serine/threonine protein kinase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.


ensembl_gene_id: SGRA_3217
symbol: SGRA_3217
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: SGRA_3223
symbol: cheB
gene_biotype: protein_coding
description:
  Protein-glutamate methylesterase, two-component response regulator, chemotaxis; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SGRA_3230
symbol: recB
gene_biotype: protein_coding
description:
  UvrD/REP helicase; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).


ensembl_gene_id: SGRA_3233
symbol: kptA
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: SGRA_3234
symbol: SGRA_3234
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.


ensembl_gene_id: SGRA_3237
symbol: ybeA
gene_biotype: protein_coding
description:
  rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SGRA_3240
symbol: ilvE-2
gene_biotype: protein_coding
description:
  Aminotransferase class IV; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.


ensembl_gene_id: SGRA_3243
symbol: sbcD
gene_biotype: protein_coding
description:
  Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SGRA_3247
symbol: menA
gene_biotype: protein_coding
description:
  UbiA prenyltransferase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.


ensembl_gene_id: SGRA_3248
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SGRA_3254
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SGRA_3257
symbol: SGRA_3257
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: SGRA_3262
symbol: paaE
gene_biotype: protein_coding
description:
  phenylacetate-CoA oxygenase/reductase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.


ensembl_gene_id: SGRA_3266
symbol: SGRA_3266
gene_biotype: protein_coding
description:
  SUA5/yciO/yrdC domain protein; COG0009 Putative translation factor (SUA5); Belongs to the SUA5 family.


ensembl_gene_id: SGRA_3267
symbol: cca
gene_biotype: protein_coding
description:
  COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SGRA_3302
symbol: SGRA_3302
gene_biotype: protein_coding
description:
  Penicillin-resistant dd-carboxypeptidase-like protein; COG3409 Putative peptidoglycan-binding domain-containing protein.


ensembl_gene_id: SGRA_3313
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SGRA_3328
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit 2; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SGRA_3329
symbol: clpX
gene_biotype: protein_coding
description:
  Sigma 54 interacting domain protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SGRA_3334
symbol: bacA
gene_biotype: protein_coding
description:
  Putative bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SGRA_3339
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SGRA_3346
symbol: SGRA_3346
gene_biotype: protein_coding
description:
  HlyB/MsbA family ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.


ensembl_gene_id: SGRA_3347
symbol: SGRA_3347
gene_biotype: protein_coding
description:
  Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SGRA_3356
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SGRA_3359
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: SGRA_3361
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SGRA_3362
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SGRA_3364
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SGRA_3373
symbol: SGRA_3373
gene_biotype: protein_coding
description:
  Putative oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: SGRA_3383
symbol: hslR
gene_biotype: protein_coding
description:
  COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).


ensembl_gene_id: SGRA_3385
symbol: SGRA_3385
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.


ensembl_gene_id: SGRA_3387
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SGRA_3388
symbol: SGRA_3388
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes.


ensembl_gene_id: SGRA_3389
symbol: rluD-3
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SGRA_3390
symbol: SGRA_3390
gene_biotype: protein_coding
description:
  Methyltransferase type 12; COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase.


ensembl_gene_id: SGRA_3393
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SGRA_3394
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SGRA_3412
symbol: hsdR-2
gene_biotype: protein_coding
description:
  COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.


ensembl_gene_id: SGRA_3429
symbol: SGRA_3429
gene_biotype: protein_coding
description:
  Putative DNA-binding protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: SGRA_3434
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SGRA_3436
symbol: SGRA_3436
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA reductase, degradative; COG1257 Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.


ensembl_gene_id: SGRA_3437
symbol: idi
gene_biotype: protein_coding
description:
  Isopentenyl pyrophosphate isomerase; COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.


ensembl_gene_id: SGRA_3444
symbol: SGRA_3444
gene_biotype: protein_coding
description:
  Sodium:solute symporter family protein; COG4147 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SGRA_3448
symbol: acs
gene_biotype: protein_coding
description:
  Acetyl-coenzyme a synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: SGRA_3456
symbol: rffA
gene_biotype: protein_coding
description:
  TDP-4-oxo-6-deoxy-D-glucose transaminase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: SGRA_3476
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SGRA_3482
symbol: SGRA_3482
gene_biotype: protein_coding
description:
  RfaQ-like lipopolysaccharide core biosynthesis glycosyl transferase; COG0859 ADP-heptose:LPS heptosyltransferase.


ensembl_gene_id: SGRA_3491
symbol: SGRA_3491
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein (HesA/MoeB/ThiF family protein); COG0607 Rhodanese-related sulfurtransferase.


ensembl_gene_id: SGRA_3534
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SGRA_3546
symbol: sms
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SGRA_3548
symbol: phoB1-2
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: SGRA_3566
symbol: fabG-2
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SGRA_3567
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SGRA_3570
symbol: SGRA_3570
gene_biotype: protein_coding
description:
  ABC-type transporter ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: SGRA_3587
symbol: SGRA_3587
gene_biotype: protein_coding
description:
  Nad(p)h dehydrogenase (quinone); COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).


ensembl_gene_id: SGRA_3593
symbol: SGRA_3593
gene_biotype: protein_coding
description:
  Alginate O-acetylation protein; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SGRA_3595
symbol: gpsA
gene_biotype: protein_coding
description:
  COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SGRA_3599
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: SGRA_3600
symbol: gmd
gene_biotype: protein_coding
description:
  Putative GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SGRA_3618
symbol: SGRA_3618
gene_biotype: protein_coding
description:
  Thrombospondin repeat-containing OmpA/MotB family outer membrane protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.


ensembl_gene_id: SGRA_3619
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SGRA_3624
symbol: SGRA_3624
gene_biotype: protein_coding
description:
  Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: SGRA_3627
symbol: hsdS
gene_biotype: protein_coding
description:
  Restriction modification system DNA specificity domain protein; COG0732 Restriction endonuclease S subunits.


ensembl_gene_id: SGRA_3650
symbol: SGRA_3650
gene_biotype: protein_coding
description:
  rsbR, positive regulator of sigma-B; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).


ensembl_gene_id: SGRA_3653
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SGRA_3654
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SGRA_3687
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SGRA_3697
symbol: SGRA_3697
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas6; COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).


ensembl_gene_id: SGRA_3699
symbol: sucB-2
gene_biotype: protein_coding
description:
  Catalytic domain of components of various dehydrogenase complexes; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.


ensembl_gene_id: SGRA_3703
symbol: recD
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease V; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.


ensembl_gene_id: SGRA_3714
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SGRA_3716
symbol: SGRA_3716
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1678 Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: SGRA_3723
symbol: mqnA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SGRA_3725
symbol: mqnE
gene_biotype: protein_coding
description:
  Radical SAM domain protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SGRA_3731
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SGRA_3734
symbol: macB
gene_biotype: protein_coding
description:
  ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SGRA_3761
symbol: SGRA_3761
gene_biotype: protein_coding
description:
  Putative short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: SGRA_3772
symbol: SGRA_3772
gene_biotype: protein_coding
description:
  Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SGRA_3784
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SGRA_3789
symbol: phnA
gene_biotype: protein_coding
description:
  Alkylphosphonate utilization operon protein phna; COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism.


ensembl_gene_id: SGRA_3814
symbol: zupT
gene_biotype: protein_coding
description:
  Zinc transporter ZupT; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.


ensembl_gene_id: SGRA_3840
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SGRA_3844
symbol: ahpC-2
gene_biotype: protein_coding
description:
  Antioxidant, AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SGRA_3848
symbol: SGRA_3848
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SGRA_3861
symbol: SGRA_3861
gene_biotype: protein_coding
description:
  NADP-dependent L-serine/L-allo-threonine dehydrogenase; COG4221 Short-chain alcohol dehydrogenase of unknown specificity.


ensembl_gene_id: SGRA_3868
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SGRA_3876
symbol: SGRA_3876
gene_biotype: protein_coding
description:
  K channel inward rectifier conserved region 2 domain protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.


ensembl_gene_id: SGRA_3896
symbol: hsdR-3
gene_biotype: protein_coding
description:
  Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SGRA_3899
symbol: bioA
gene_biotype: protein_coding
description:
  COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SGRA_3933
symbol: SGRA_3933
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase superfamily protein; COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: SGRA_3957
symbol: SGRA_3957
gene_biotype: protein_coding
description:
  Putative AraC family transcriptional regulator; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.


ensembl_gene_id: SGRA_3960
symbol: SGRA_3960
gene_biotype: protein_coding
description:
  Transporter, drug/metabolite exporter; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.


ensembl_gene_id: SGRA_3962
symbol: cobB
gene_biotype: protein_coding
description:
  COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: SGRA_3966
symbol: tspO
gene_biotype: protein_coding
description:
  TspO and MBR like protein; COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog).


ensembl_gene_id: SGRA_3985
symbol: gapA-2
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SGRA_3991
symbol: wbpO
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SGRA_4003
symbol: kdtA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SGRA_4006
symbol: hpt
gene_biotype: protein_coding
description:
  COG0634 Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SGRA_4007
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SGRA_4018
symbol: betT
gene_biotype: protein_coding
description:
  BCCT transporter; COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: SGRA_4019
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SGRA_4031
symbol: SGRA_4031
gene_biotype: protein_coding
description:
  rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.


ensembl_gene_id: SGRA_4037
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SGRA_4045
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SGRA_4047
symbol: smf
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.


ensembl_gene_id: SGRA_4048
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SGRA_4049
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SGRA_4054
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SGRA_4056
symbol: SGRA_4056
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.


ensembl_gene_id: SGRA_4070
symbol: SGRA_4070
gene_biotype: protein_coding
description:
  Cell volume regulation protein CvrA; COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain.


ensembl_gene_id: SGRA_4071
symbol: SGRA_4071
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: SGRA_4083
symbol: SGRA_4083
gene_biotype: protein_coding
description:
  Heat shock protein DnaJ-like protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.


ensembl_gene_id: SGRA_4099
symbol: lpxD-2
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SGRA_4101
symbol: glpA
gene_biotype: protein_coding
description:
  COG0578 Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SGRA_4128
symbol: SGRA_4128
gene_biotype: protein_coding
description:
  COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.


ensembl_gene_id: SGRA_4139
symbol: ycaJ
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase.


ensembl_gene_id: SGRA_4142
symbol: rsmE
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SGRA_4146
symbol: SGRA_4146
gene_biotype: protein_coding
description:
  Degt/dnrj/eryc1/strs aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: SGRA_4147
symbol: SGRA_4147
gene_biotype: protein_coding
description:
  Putative hexapeptide transferase family protein; COG0110 Acetyltransferase (isoleucine patch superfamily).


ensembl_gene_id: SGRA_4171
symbol: gldG
gene_biotype: protein_coding
description:
  Gliding motility protein GldG; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component.


ensembl_gene_id: SGRA_4176
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SGRA_4187
symbol: prc-3
gene_biotype: protein_coding
description:
  Carboxy-terminal processing protease precursor; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.


ensembl_gene_id: SGRA_4225
symbol: SGRA_4225
gene_biotype: protein_coding
description:
  5'-Nucleotidase domain protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.


ensembl_gene_id: SGRA_4226
symbol: SGRA_4226
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.


# pathwayInfo

id: CL:1001
description: Benzoate degradation, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1001_Benzoate_degradation,_and_Coenzyme_A_transferase


id: CL:1023
description: Acyl-CoA dehydrogenase, C-terminal domain, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1023_Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Electron_transfer_flavoprotein_domain


id: CL:1037
description: Aldehyde dehydrogenase, glutamic acid active site, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1037_Aldehyde_dehydrogenase,_glutamic_acid_active_site,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:1039
description: AMP-binding enzyme C-terminal domain, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1039_AMP-binding_enzyme_C-terminal_domain,_and_Ascorbate_and_aldarate_metabolism


id: CL:1056
description: Methylmalonyl-CoA mutase, and Vicinal oxygen chelate (VOC) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1056_Methylmalonyl-CoA_mutase,_and_Vicinal_oxygen_chelate_(VOC)_domain


id: CL:1065
description: Fatty acid biosynthesis, and Acetyl-CoA carboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1065_Fatty_acid_biosynthesis,_and_Acetyl-CoA_carboxylase


id: CL:1067
description: Fatty acid biosynthesis, and Acetyl-CoA carboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1067_Fatty_acid_biosynthesis,_and_Acetyl-CoA_carboxylase


id: CL:1070
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1070_3-oxoacyl-[acyl-carrier-protein]_synthase_activity,_and_Short-chain_dehydrogenase/reductase,_conserved_site

description:
  3-oxoacyl-[acyl-carrier-protein] synthase activity, and Short-chain dehydrogenase/reductase, conserved site


id: CL:1093
description: Biotin carboxylation domain, and Acetyl-CoA carboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1093_Biotin_carboxylation_domain,_and_Acetyl-CoA_carboxylase


id: CL:1114
description: Mixed, incl. Organic acid biosynthetic process, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1114_Mixed,_incl._Organic_acid_biosynthetic_process,_and_Glycine,_serine_and_threonine_metabolism


id: CL:1115
description: Cellular amino acid biosynthetic process, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1115_Cellular_amino_acid_biosynthetic_process,_and_Glycine,_serine_and_threonine_metabolism


id: CL:1117
description: One carbon pool by folate, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1117_One_carbon_pool_by_folate,_and_Glycine,_serine_and_threonine_metabolism


id: CL:1118
description: One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1118_One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:1120
description: Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1120_Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:1141
description: Mixed, incl. Valine, leucine and isoleucine biosynthesis, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1141_Mixed,_incl._Valine,_leucine_and_isoleucine_biosynthesis,_and_Transsulfuration


id: CL:1161
description: Amino-acid biosynthesis, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1161_Amino-acid_biosynthesis,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1162
description: Lysine biosynthetic process, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1162_Lysine_biosynthetic_process,_and_Histidine_biosynthetic_process


id: CL:1202
description: Vitamin metabolic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1202_Vitamin_metabolic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1203
description: Nicotinate and nicotinamide metabolism, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1203_Nicotinate_and_nicotinamide_metabolism,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:1204
description: Cellular modified amino acid biosynthetic process, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1204_Cellular_modified_amino_acid_biosynthetic_process,_and_Riboflavin_metabolism


id: CL:1205
description: Riboflavin metabolism, and Folic acid-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1205_Riboflavin_metabolism,_and_Folic_acid-containing_compound_biosynthetic_process


id: CL:1220
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1220_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:1232
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1232_Pyridine_nucleotide_biosynthetic_process


id: CL:1246
description: Biotin metabolic process, and Aminotransferase, class-II, pyridoxal-phosphate binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1246_Biotin_metabolic_process,_and_Aminotransferase,_class-II,_pyridoxal-phosphate_binding_site


id: CL:1259
description: Arginine and proline metabolism, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1259_Arginine_and_proline_metabolism,_and_Cytidylyltransferase_activity


id: CL:1279
description: Mixed, incl. Cytidylyltransferase activity, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1279_Mixed,_incl._Cytidylyltransferase_activity,_and_Protein_processing


id: CL:1288
description: Mixed, incl. Elongator protein 3, MiaB family, Radical SAM, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1288_Mixed,_incl._Elongator_protein_3,_MiaB_family,_Radical_SAM,_and_NUDIX_domain


id: CL:1289
description: Mixed, incl. Methylthiotransferase, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1289_Mixed,_incl._Methylthiotransferase,_and_tRNA_processing


id: CL:1292
description: Methylthiotransferase, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1292_Methylthiotransferase,_and_tRNA_processing


id: CL:1311
description: Mixed, incl. NUDIX domain, and Lipoprotein localization to membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1311_Mixed,_incl._NUDIX_domain,_and_Lipoprotein_localization_to_membrane


id: CL:1328
description: Mixed, incl. Peptidoglycan metabolic process, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1328_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Regulation_of_cell_shape


id: CL:1329
description: Mixed, incl. Peptidoglycan biosynthesis, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1329_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Peptidoglycan_muralytic_activity


id: CL:1330
description: Mixed, incl. Peptidoglycan biosynthesis, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1330_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Regulation_of_cell_shape


id: CL:1332
description: Mixed, incl. Peptidoglycan biosynthesis, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1332_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Regulation_of_cell_shape


id: CL:1333
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1333_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_cycle_protein


id: CL:1335
description: Peptidoglycan biosynthesis, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1335_Peptidoglycan_biosynthesis,_and_Cell_cycle_protein


id: CL:1339
description: Mur ligase, central, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1339_Mur_ligase,_central,_and_Vancomycin_resistance


id: CL:1384
description: Cell morphogenesis, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1384_Cell_morphogenesis,_and_Regulation_of_cell_shape


id: CL:1403
description: Mixed, incl. N-acetylmuramoyl-L-alanine amidase activity, and SecB-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1403_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase_activity,_and_SecB-like_superfamily


id: CL:1417
description: Mixed, incl. FAD-binding domain, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1417_Mixed,_incl._FAD-binding_domain,_and_Major_Facilitator_Superfamily


id: CL:1433
description: Mixed, incl. Generation of precursor metabolites and energy, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1433_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Iron-sulfur_cluster_assembly


id: CL:1434
description: Mixed, incl. Generation of precursor metabolites and energy, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1434_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Peptidase_M16,_C-terminal


id: CL:1435
description: Mixed, incl. Generation of precursor metabolites and energy, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1435_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Peptidase_M16,_C-terminal


id: CL:1437
description: Mixed, incl. Generation of precursor metabolites and energy, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1437_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Peptidase_M16,_C-terminal


id: CL:1438
description: Mixed, incl. Electron transfer activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1438_Mixed,_incl._Electron_transfer_activity,_and_Peptidase_M16,_C-terminal


id: CL:1439
description: Mixed, incl. Electron transfer activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1439_Mixed,_incl._Electron_transfer_activity,_and_Peptidase_M16,_C-terminal


id: CL:1441
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1441_Mixed,_incl._Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_C-terminal

description:
  Mixed, incl. Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, C-terminal


id: CL:1442
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1442_Mixed,_incl._Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_C-terminal

description:
  Mixed, incl. Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, C-terminal


id: CL:1445
description: Mixed, incl. Phosphopantetheine, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1445_Mixed,_incl._Phosphopantetheine,_and_4Fe-4S_binding_domain


id: CL:1476
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1476_Mixed,_incl._Twin-arginine_translocation_pathway,_signal_sequence,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups

description:
  Mixed, incl. Twin-arginine translocation pathway, signal sequence, and Oxidoreductase activity, acting on CH or CH2 groups


id: CL:1496
description: Mixed, incl. Armadillo-type fold, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1496_Mixed,_incl._Armadillo-type_fold,_and_Cytochrome_c


id: CL:1506
description: TPM domain, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1506_TPM_domain,_and_Protein_ubiquitination


id: CL:1529
description: Mixed, incl. Clp, repeat (R) domain, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1529_Mixed,_incl._Clp,_repeat_(R)_domain,_and_Cytochrome_c-like_domain


id: CL:1538
description: Mixed, incl. Carboxylesterase family, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1538_Mixed,_incl._Carboxylesterase_family,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:1549
description: Mixed, incl. Iron-sulfur cluster assembly, and Oxidoreductase FAD/NAD(P)-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1549_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Oxidoreductase_FAD/NAD(P)-binding


id: CL:1551
description: Mixed, incl. Iron-sulfur cluster assembly, and Oxidoreductase FAD/NAD(P)-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1551_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Oxidoreductase_FAD/NAD(P)-binding


id: CL:1553
description: Iron-sulfur cluster assembly, and 2Fe-2S iron-sulfur cluster binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1553_Iron-sulfur_cluster_assembly,_and_2Fe-2S_iron-sulfur_cluster_binding_domain


id: CL:1556
description: [2Fe-2S] cluster assembly, and FeS cluster biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1556_[2Fe-2S]_cluster_assembly,_and_FeS_cluster_biogenesis


id: CL:1572
description: Pyridine nucleotide-disulphide oxidoreductase, and Oxidoreductase FAD/NAD(P)-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1572_Pyridine_nucleotide-disulphide_oxidoreductase,_and_Oxidoreductase_FAD/NAD(P)-binding


id: CL:1599
description: Mixed, incl. RNA 3-end processing, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1599_Mixed,_incl._RNA_3-end_processing,_and_Telomere_recombination


id: CL:1612
description: Mostly uncharacterized, incl. NmrA-like family, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1612_Mostly_uncharacterized,_incl._NmrA-like_family,_and_Fatty_acid_hydroxylase


id: CL:1613
description: Mixed, incl. NmrA-like family, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1613_Mixed,_incl._NmrA-like_family,_and_Fatty_acid_hydroxylase


id: CL:1616
description: Mixed, incl. Fatty acid hydroxylase, and Sodium Bile acid symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1616_Mixed,_incl._Fatty_acid_hydroxylase,_and_Sodium_Bile_acid_symporter_family


id: CL:1629
description: Mixed, incl. NmrA-like family, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1629_Mixed,_incl._NmrA-like_family,_and_Exoribonuclease_activity


id: CL:1638
description: Mixed, incl. Superoxide dismutase activity, and D-alanyl-D-alanine carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1638_Mixed,_incl._Superoxide_dismutase_activity,_and_D-alanyl-D-alanine_carboxypeptidase


id: CL:1647
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1647_Mixed,_incl._Alanine,_aspartate_and_glutamate_metabolism,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Alanine, aspartate and glutamate metabolism, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1649
description: Glutamine metabolic process, and Acid-ammonia (or amide) ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1649_Glutamine_metabolic_process,_and_Acid-ammonia_(or_amide)_ligase_activity


id: CL:1670
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1670_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Sulfur_relay_system


id: CL:1672
description: tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1672_tRNA_threonylcarbamoyladenosine_modification


id: CL:1691
description: Mixed, incl. OmpA family, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1691_Mixed,_incl._OmpA_family,_and_Peptidase_S1C


id: CL:1692
description: Mixed, incl. OmpA family, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1692_Mixed,_incl._OmpA_family,_and_Peptidase_S1C


id: CL:1693
description: Mixed, incl. OmpA family, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1693_Mixed,_incl._OmpA_family,_and_Peptidase_S1C


id: CL:1750
description: Mixed, incl. LURP-one-related, and BRCT domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1750_Mixed,_incl._LURP-one-related,_and_BRCT_domain_superfamily


id: CL:1761
description: Mixed, incl. Amino acid transmembrane transporter activity, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1761_Mixed,_incl._Amino_acid_transmembrane_transporter_activity,_and_Lysin_motif


id: CL:1770
description: Mixed, incl. Rhodanese-like domain, and Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1770_Mixed,_incl._Rhodanese-like_domain,_and_Infection_with_Mycobacterium_tuberculosis


id: CL:1771
description: Mostly uncharacterized, incl. Rhodanese-like domain, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1771_Mostly_uncharacterized,_incl._Rhodanese-like_domain,_and_ABC_transporter_transmembrane_region


id: CL:1772
description: Mostly uncharacterized, incl. Rhodanese-like domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1772_Mostly_uncharacterized,_incl._Rhodanese-like_domain,_and_Sulphur_transport


id: CL:1773
description: Mixed, incl. Rhodanese-like domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1773_Mixed,_incl._Rhodanese-like_domain,_and_Sulphur_transport


id: CL:1774
description: Mixed, incl. Rhodanese-like domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1774_Mixed,_incl._Rhodanese-like_domain,_and_Sulphur_transport


id: CL:1775
description: Mixed, incl. Metallo-beta-lactamase superfamily, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1775_Mixed,_incl._Metallo-beta-lactamase_superfamily,_and_Sulphur_transport


id: CL:1778
description: Sulfur dioxygenase activity, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1778_Sulfur_dioxygenase_activity,_and_Lactate_metabolic_process


id: CL:1799
description: Mixed, incl. Thioredoxin, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1799_Mixed,_incl._Thioredoxin,_and_Rhodanese-like_domain


id: CL:1812
description: Mixed, incl. Rhodanese-like domain, and Sodium Bile acid symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1812_Mixed,_incl._Rhodanese-like_domain,_and_Sodium_Bile_acid_symporter_family


id: CL:1814
description: Mixed, incl. Sodium Bile acid symporter family, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1814_Mixed,_incl._Sodium_Bile_acid_symporter_family,_and_Blockage_of_phagosome_acidification


id: CL:1842
description: ABC transporter transmembrane region, and ABC-transporter extension domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1842_ABC_transporter_transmembrane_region,_and_ABC-transporter_extension_domain


id: CL:1853
description: Mixed, incl. Spermidine synthase activity, and Di-haem cytochrome c peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1853_Mixed,_incl._Spermidine_synthase_activity,_and_Di-haem_cytochrome_c_peroxidase


id: CL:1862
description: Mixed, incl. Superoxide dismutase activity, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1862_Mixed,_incl._Superoxide_dismutase_activity,_and_Heme_binding


id: CL:1875
description: Mixed, incl. Porphyrin and chlorophyll metabolism, and Pantothenate and CoA biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1875_Mixed,_incl._Porphyrin_and_chlorophyll_metabolism,_and_Pantothenate_and_CoA_biosynthesis


id: CL:1876
description: Mixed, incl. Porphyrin biosynthesis, and Pantothenate and CoA biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1876_Mixed,_incl._Porphyrin_biosynthesis,_and_Pantothenate_and_CoA_biosynthesis


id: CL:1878
description: Coproporphyrinogen oxidase activity, and Heme biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1878_Coproporphyrinogen_oxidase_activity,_and_Heme_biosynthetic_process


id: CL:1894
description: Mixed, incl. Pantothenate and CoA biosynthesis, and Uroporphyrinogen-III synthase HemD
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1894_Mixed,_incl._Pantothenate_and_CoA_biosynthesis,_and_Uroporphyrinogen-III_synthase_HemD


id: CL:1909
description: Mixed, incl. Cobalamin metabolic process, and Carbon-oxygen lyase activity, acting on phosphates
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1909_Mixed,_incl._Cobalamin_metabolic_process,_and_Carbon-oxygen_lyase_activity,_acting_on_phosphates


id: CL:1920
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1920_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1922
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1922_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1924
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1924_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_metabolic_process


id: CL:1925
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1925_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1926
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1926_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1927
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1927_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthesis_protein


id: CL:1929
description: O-Antigen nucleotide sugar biosynthesis, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1929_O-Antigen_nucleotide_sugar_biosynthesis,_and_Phosphomethylpyrimidine_kinase


id: CL:1930
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1930_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1932
description: Polyketide sugar unit biosynthesis, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1932_Polyketide_sugar_unit_biosynthesis,_and_UDP_binding_domain


id: CL:1935
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1935_Polyketide_sugar_unit_biosynthesis


id: CL:1962
description: Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1962_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1983
description: Glycosyl transferases group 1, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1983_Glycosyl_transferases_group_1,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1994
description: Mostly uncharacterized, incl. PglD, N-terminal, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1994_Mostly_uncharacterized,_incl._PglD,_N-terminal,_and_Acid_phosphatase_homologues


id: CL:1996
description: Mixed, incl. PglD, N-terminal, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:1996_Mixed,_incl._PglD,_N-terminal,_and_Beta-eliminating_lyase


id: CL:2012
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2012_Mixed,_incl._DNA_polymerase_III,_clamp_loader_complex,_gamma/delta/delta_subunit,_C-terminal,_and_Protein_of_unknown_function_DUF2490

description:
  Mixed, incl. DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal, and Protein of unknown function DUF2490


id: CL:2022
description: Mixed, incl. Asparagine metabolic process, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2022_Mixed,_incl._Asparagine_metabolic_process,_and_ABC-2_type_transporter


id: CL:2024
description: Mixed, incl. ABC-2 type transporter, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2024_Mixed,_incl._ABC-2_type_transporter,_and_Glycosyltransferase_like_family_2


id: CL:2047
description: Mixed, incl. Polysaccharide transport, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2047_Mixed,_incl._Polysaccharide_transport,_and_Alpha/beta_hydrolase_fold


id: CL:2064
description: Mixed, incl. NADP+ binding, and SpoIIAA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2064_Mixed,_incl._NADP+_binding,_and_SpoIIAA-like


id: CL:2076
description: Mixed, incl. Domain of unknown function DUF262, and AAA domain, group 15
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2076_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_AAA_domain,_group_15


id: CL:2092
description: Mixed, incl. Lipopolysaccharide biosynthesis, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2092_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_ABC_transporters


id: CL:2093
description: Mixed, incl. Lipopolysaccharide biosynthesis, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2093_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_ABC_transporters


id: CL:2095
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2095_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Permease_LptG/LptF-related


id: CL:2097
description: Lipopolysaccharide biosynthesis, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2097_Lipopolysaccharide_biosynthesis,_and_Permease_LptG/LptF-related


id: CL:2153
description: Peptidase family M48, and Single-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2153_Peptidase_family_M48,_and_Single-stranded_DNA_binding


id: CL:2162
description: Mixed, incl. Bactofilin A/B, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2162_Mixed,_incl._Bactofilin_A/B,_and_O-Antigen_ligase


id: CL:2164
description: Mixed, incl. Bactofilin A/B, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2164_Mixed,_incl._Bactofilin_A/B,_and_Biotin-binding_site


id: CL:2181
description: Mostly uncharacterized, incl. HDIG domain, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2181_Mostly_uncharacterized,_incl._HDIG_domain,_and_YceI-like_domain


id: CL:2182
description: Mostly uncharacterized, incl. YceI-like domain, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2182_Mostly_uncharacterized,_incl._YceI-like_domain,_and_Cyclase_activity


id: CL:2184
description: Mixed, incl. Cyclase activity, and Inositol monophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2184_Mixed,_incl._Cyclase_activity,_and_Inositol_monophosphatase-like


id: CL:2200
description: Mixed, incl. YceI-like domain, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2200_Mixed,_incl._YceI-like_domain,_and_FAD_dependent_oxidoreductase


id: CL:2211
description: Mixed, incl. HDIG domain, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2211_Mixed,_incl._HDIG_domain,_and_Acetyltransferase_(GNAT)_domain


id: CL:2224
description: Mixed, incl. Methyltransferase activity, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2224_Mixed,_incl._Methyltransferase_activity,_and_Mannosylation


id: CL:2225
description: Mixed, incl. Methyltransferase activity, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2225_Mixed,_incl._Methyltransferase_activity,_and_Peptidase_M28


id: CL:2226
description: Mixed, incl. Tetrapyrrole methylase, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2226_Mixed,_incl._Tetrapyrrole_methylase,_and_Peptidase_M28


id: CL:2228
description: Mixed, incl. 16S rRNA methyltransferase RsmB/F, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2228_Mixed,_incl._16S_rRNA_methyltransferase_RsmB/F,_and_Protein_alkylation


id: CL:2248
description: Mixed, incl. TRAM domain, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2248_Mixed,_incl._TRAM_domain,_and_OsmC/Ohr_family


id: CL:2265
description: Mixed, incl. Met-10+ like-protein, and Putative RNA methylase family UPF0020
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2265_Mixed,_incl._Met-10+_like-protein,_and_Putative_RNA_methylase_family_UPF0020


id: CL:2281
description: Mixed, incl. DNA recombination, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2281_Mixed,_incl._DNA_recombination,_and_AAA_domain


id: CL:2282
description: Mixed, incl. AAA domain, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2282_Mixed,_incl._AAA_domain,_and_Core-binding_(CB)_domain


id: CL:2283
description: Mixed, incl. AAA domain, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2283_Mixed,_incl._AAA_domain,_and_Chromosome_partition


id: CL:2286
description: Mixed, incl. Chromosome partition, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2286_Mixed,_incl._Chromosome_partition,_and_AAA_domain


id: CL:2308
description: Mixed, incl. MerR-type HTH domain, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2308_Mixed,_incl._MerR-type_HTH_domain,_and_Core-binding_(CB)_domain


id: CL:2317
description: Mixed, incl. Histone-like DNA-binding protein, and dGTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2317_Mixed,_incl._Histone-like_DNA-binding_protein,_and_dGTP_catabolic_process


id: CL:2319
description: Histone-like DNA-binding protein, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2319_Histone-like_DNA-binding_protein,_and_Vitamin_transport


id: CL:2342
description: Mixed, incl. TAT protein transport complex, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2342_Mixed,_incl._TAT_protein_transport_complex,_and_Aminopeptidase


id: CL:2344
description: Mixed, incl. TAT protein transport complex, and TrkA-N domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2344_Mixed,_incl._TAT_protein_transport_complex,_and_TrkA-N_domain


id: CL:2364
description: Mixed, incl. Peptidase M24, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2364_Mixed,_incl._Peptidase_M24,_and_Lactate_metabolic_process


id: CL:2378
description: Mixed, incl. Thioredoxin-like superfamily, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2378_Mixed,_incl._Thioredoxin-like_superfamily,_and_LysR,_substrate-binding


id: CL:2379
description: Mixed, incl. Thioredoxin-like superfamily, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2379_Mixed,_incl._Thioredoxin-like_superfamily,_and_LysR,_substrate-binding


id: CL:2380
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2380_Mixed,_incl._Thioredoxin-like_superfamily,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Mixed, incl. Thioredoxin-like superfamily, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:2381
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2381_Thioredoxin-like_superfamily,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Thioredoxin-like superfamily, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:2382
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2382_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin-like_superfamily

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin-like superfamily


id: CL:2385
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2385_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Cytochrome_C_biogenesis_protein_transmembrane_region

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Cytochrome C biogenesis protein transmembrane region


id: CL:2407
description: Mixed, incl. Peroxiredoxin-like 1, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2407_Mixed,_incl._Peroxiredoxin-like_1,_and_WYL_domain


id: CL:2416
description: Mixed, incl. 1-Cys peroxiredoxin, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2416_Mixed,_incl._1-Cys_peroxiredoxin,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:2427
description: Mixed, incl. LysR, substrate-binding, and Oxidoreductase activity, acting on peroxide as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2427_Mixed,_incl._LysR,_substrate-binding,_and_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: CL:2428
description: Mixed, incl. Catalase activity, and Amine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2428_Mixed,_incl._Catalase_activity,_and_Amine_catabolic_process


id: CL:2431
description: Catalase activity, and Amine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2431_Catalase_activity,_and_Amine_catabolic_process


id: CL:2450
description: LysR, substrate-binding, and Flavodoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2450_LysR,_substrate-binding,_and_Flavodoxin-like_fold


id: CL:2483
description: Mixed, incl. Isoprenoid metabolic process, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2483_Mixed,_incl._Isoprenoid_metabolic_process,_and_Terpenoid_backbone_biosynthesis


id: CL:2485
description: Mixed, incl. Terpenoid backbone biosynthesis, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2485_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_LysM_domain


id: CL:2486
description: Mixed, incl. Terpenoid backbone biosynthesis, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2486_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_LysM_domain


id: CL:2488
description: Terpenoid backbone biosynthesis, and Non-specific endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2488_Terpenoid_backbone_biosynthesis,_and_Non-specific_endonuclease


id: CL:2533
description: Mixed, incl. Amine oxidase, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2533_Mixed,_incl._Amine_oxidase,_and_Carotenoid_biosynthesis


id: CL:2534
description: Mixed, incl. Carotenoid biosynthesis, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2534_Mixed,_incl._Carotenoid_biosynthesis,_and_Cyclase_activity


id: CL:2537
description: Carotenoid biosynthesis, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2537_Carotenoid_biosynthesis,_and_Cyclase_activity


id: CL:2563
description: Mixed, incl. BRCT domain superfamily, and Flavin containing amine oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2563_Mixed,_incl._BRCT_domain_superfamily,_and_Flavin_containing_amine_oxidoreductase


id: CL:2598
description: Mixed, incl. Transmembrane transporter activity, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2598_Mixed,_incl._Transmembrane_transporter_activity,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:2600
description: Mixed, incl. Transmembrane transporter activity, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2600_Mixed,_incl._Transmembrane_transporter_activity,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:2601
description: Mixed, incl. Transmembrane transporter activity, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2601_Mixed,_incl._Transmembrane_transporter_activity,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:2603
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2603_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. CHU_C Type IX secretion signal domain, and Tetratricopeptide-like helical domain superfamily


id: CL:2605
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2605_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_CHU_C_Type_IX_secretion_signal_domain

description:
  Mixed, incl. Tetratricopeptide-like helical domain superfamily, and CHU_C Type IX secretion signal domain


id: CL:2606
description: Mixed, incl. CHU_C Type IX secretion signal domain, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2606_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_WD40-like_beta_propeller


id: CL:2608
description: Mixed, incl. CHU_C Type IX secretion signal domain, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2608_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_WD40-like_beta_propeller


id: CL:2610
description: Mixed, incl. Type IX secretion system membrane protein PorP/SprF, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2610_Mixed,_incl._Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_WD40-like_beta_propeller


id: CL:2613
description: Mixed, incl. Type IX secretion system membrane protein PorP/SprF, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2613_Mixed,_incl._Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_WD40-like_beta_propeller


id: CL:2615
description: Mixed, incl. Type IX secretion system membrane protein PorP/SprF, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2615_Mixed,_incl._Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_WD40-like_beta_propeller


id: CL:2616
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2616_Mixed,_incl._Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_CHU_C_Type_IX_secretion_signal_domain

description:
  Mixed, incl. Type IX secretion system membrane protein PorP/SprF, and CHU_C Type IX secretion signal domain


id: CL:2617
description: Mixed, incl. WD40-like beta propeller, and Type IX secretion system membrane protein PorP/SprF
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2617_Mixed,_incl._WD40-like_beta_propeller,_and_Type_IX_secretion_system_membrane_protein_PorP/SprF


id: CL:2619
description: Mixed, incl. Type IX secretion system membrane protein PorP/SprF, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2619_Mixed,_incl._Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_WD40-like_beta_propeller


id: CL:2621
description: Mixed, incl. C-type lectin fold, and Type IX secretion system membrane protein PorP/SprF
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2621_Mixed,_incl._C-type_lectin_fold,_and_Type_IX_secretion_system_membrane_protein_PorP/SprF


id: CL:2622
description: Mostly uncharacterized, incl. C-type lectin fold, and GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2622_Mostly_uncharacterized,_incl._C-type_lectin_fold,_and_GldM_C-terminal_domain


id: CL:2624
description: Mixed, incl. C-type lectin fold, and GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2624_Mixed,_incl._C-type_lectin_fold,_and_GldM_C-terminal_domain


id: CL:2644
description: Mixed, incl. Type IX secretion system membrane protein PorP/SprF, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2644_Mixed,_incl._Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_C-type_lectin_fold


id: CL:2659
description: Mixed, incl. WD40-like beta propeller, and Type IX secretion system membrane protein PorP/SprF
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2659_Mixed,_incl._WD40-like_beta_propeller,_and_Type_IX_secretion_system_membrane_protein_PorP/SprF


id: CL:2661
description: Mixed, incl. WD40-like Beta Propeller Repeat, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2661_Mixed,_incl._WD40-like_Beta_Propeller_Repeat,_and_TonB,_C-terminal


id: CL:2689
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2689_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_Type_IX_secretion_system_membrane_protein_PorP/SprF

description:
  Mixed, incl. Outer membrane protein beta-barrel domain, and Type IX secretion system membrane protein PorP/SprF


id: CL:2691
description: Mixed, incl. Outer membrane protein beta-barrel domain, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2691_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_Protein_import


id: CL:2715
description: CoA-binding, and WD40-like Beta Propeller Repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2715_CoA-binding,_and_WD40-like_Beta_Propeller_Repeat


id: CL:2742
description: Mixed, incl. SprB repeat, and Von Willebrand factor A-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2742_Mixed,_incl._SprB_repeat,_and_Von_Willebrand_factor_A-like_domain_superfamily


id: CL:2745
description: Von Willebrand factor A-like domain superfamily, and Terpenoid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2745_Von_Willebrand_factor_A-like_domain_superfamily,_and_Terpenoid_biosynthetic_process


id: CL:2781
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Patatin-like phospholipase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2781_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Patatin-like_phospholipase


id: CL:2783
description: Mixed, incl. Patatin-like phospholipase, and Peptidase S26A, signal peptidase I, serine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2783_Mixed,_incl._Patatin-like_phospholipase,_and_Peptidase_S26A,_signal_peptidase_I,_serine_active_site


id: CL:280
description: Translation, and Cell inner membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:280_Translation,_and_Cell_inner_membrane


id: CL:2817
description: Mixed, incl. Cytochrome complex assembly, and TonB-dependent receptor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2817_Mixed,_incl._Cytochrome_complex_assembly,_and_TonB-dependent_receptor-like


id: CL:2818
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2818_Mixed,_incl._TonB-dependent_receptor-like,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. TonB-dependent receptor-like, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:2820
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2820_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_FG-GAP_repeat


id: CL:2823
description: Mixed, incl. O-Antigen ligase, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2823_Mixed,_incl._O-Antigen_ligase,_and_Polysaccharide_biosynthesis_protein


id: CL:2838
description: Mixed, incl. FG-GAP repeat, and Multiheme cytochrome superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2838_Mixed,_incl._FG-GAP_repeat,_and_Multiheme_cytochrome_superfamily


id: CL:2863
description: Mixed, incl. Cytochrome complex assembly, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2863_Mixed,_incl._Cytochrome_complex_assembly,_and_TonB,_C-terminal


id: CL:2865
description: Mixed, incl. START-like domain superfamily, and Ribulose-phosphate binding barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2865_Mixed,_incl._START-like_domain_superfamily,_and_Ribulose-phosphate_binding_barrel


id: CL:2881
description: Heme transport, and Cytochrome c assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2881_Heme_transport,_and_Cytochrome_c_assembly_protein


id: CL:2891
description: Mixed, incl. Molecular transducer activity, and Sporulation-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2891_Mixed,_incl._Molecular_transducer_activity,_and_Sporulation-like_domain_superfamily


id: CL:292
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:292_Ribosome,_and_Translation_regulator_activity


id: CL:2920
description: Mixed, incl. Membrane organization, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2920_Mixed,_incl._Membrane_organization,_and_Integral_component_of_plasma_membrane


id: CL:2922
description: Mixed, incl. Membrane organization, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2922_Mixed,_incl._Membrane_organization,_and_Integral_component_of_plasma_membrane


id: CL:2924
description: Mixed, incl. Membrane organization, and Endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2924_Mixed,_incl._Membrane_organization,_and_Endopeptidase_activity


id: CL:2925
description: Membrane organization, and Endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2925_Membrane_organization,_and_Endopeptidase_activity


id: CL:2927
description: Membrane organization, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2927_Membrane_organization,_and_Signal_peptide_processing


id: CL:2929
description: Tetratricopeptide repeat, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2929_Tetratricopeptide_repeat,_and_Signal_peptide_processing


id: CL:294
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:294_Ribosome,_and_Translation_regulator_activity


id: CL:2942
description: Chaperone protein Skp, and POTRA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2942_Chaperone_protein_Skp,_and_POTRA_domain


id: CL:2964
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2964_Mostly_uncharacterized,_incl._Integral_component_of_plasma_membrane,_and_Uroporphyrinogen-III_synthase_HemD

description:
  Mostly uncharacterized, incl. Integral component of plasma membrane, and Uroporphyrinogen-III synthase HemD


id: CL:2965
description: Mixed, incl. Uroporphyrinogen-III synthase HemD, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2965_Mixed,_incl._Uroporphyrinogen-III_synthase_HemD,_and_Integral_component_of_plasma_membrane


id: CL:2967
description: Mixed, incl. Uroporphyrinogen-III synthase HemD, and GH3 family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2967_Mixed,_incl._Uroporphyrinogen-III_synthase_HemD,_and_GH3_family


id: CL:2985
description: Mixed, incl. START-like domain superfamily, and ATPase, nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:2985_Mixed,_incl._START-like_domain_superfamily,_and_ATPase,_nucleotide_binding_domain


id: CL:3017
description: Mixed, incl. Secretion system C-terminal sorting domain, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3017_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Bacterial-type_flagellum_organization


id: CL:3018
description: Mixed, incl. Secretion system C-terminal sorting domain, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3018_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Bacterial-type_flagellum_organization


id: CL:3019
description: Mixed, incl. Secretion system C-terminal sorting domain, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3019_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Bacterial-type_flagellum_organization


id: CL:3021
description: Mixed, incl. Secretion system C-terminal sorting domain, and MORN variant
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3021_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_MORN_variant


id: CL:3022
description: Mixed, incl. MORN variant, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3022_Mixed,_incl._MORN_variant,_and_Secretion_system_C-terminal_sorting_domain


id: CL:3023
description: Mostly uncharacterized, incl. Gingipain, and Lamin tail domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3023_Mostly_uncharacterized,_incl._Gingipain,_and_Lamin_tail_domain_superfamily


id: CL:3025
description: Mixed, incl. Type II protein secretion system complex, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3025_Mixed,_incl._Type_II_protein_secretion_system_complex,_and_Gingipain


id: CL:3027
description: Mixed, incl. Gingipain, and Bacterial surface antigen (D15)
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3027_Mixed,_incl._Gingipain,_and_Bacterial_surface_antigen_(D15)


id: CL:3053
description: Mixed, incl. Gingipain, and PPIC-type PPIASE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3053_Mixed,_incl._Gingipain,_and_PPIC-type_PPIASE_domain


id: CL:3068
description: Mixed, incl. MORN variant, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3068_Mixed,_incl._MORN_variant,_and_Glycosyl_transferases_group_1


id: CL:3069
description: Mixed, incl. Glycosyl transferases group 1, and PKD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3069_Mixed,_incl._Glycosyl_transferases_group_1,_and_PKD_domain


id: CL:3071
description: Mixed, incl. WD repeat, and PKD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3071_Mixed,_incl._WD_repeat,_and_PKD_domain


id: CL:3093
description: MORN variant, and Kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3093_MORN_variant,_and_Kinase_activity


id: CL:3103
description: Metallo-peptidase family M12, and Fibronectin type III superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3103_Metallo-peptidase_family_M12,_and_Fibronectin_type_III_superfamily


id: CL:3119
description: Mixed, incl. CHAT domain, and Concanavalin A-like lectin/glucanase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3119_Mixed,_incl._CHAT_domain,_and_Concanavalin_A-like_lectin/glucanase_domain_superfamily


id: CL:3120
description: Mixed, incl. CHAT domain, and Lysylphosphatidylglycerol synthase TM region
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3120_Mixed,_incl._CHAT_domain,_and_Lysylphosphatidylglycerol_synthase_TM_region


id: CL:3121
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3121_Mixed,_incl._Lysylphosphatidylglycerol_synthase_TM_region,_and_Alkaline-phosphatase-like,_core_domain_superfamily

description:
  Mixed, incl. Lysylphosphatidylglycerol synthase TM region, and Alkaline-phosphatase-like, core domain superfamily


id: CL:3149
description: Mixed, incl. CUB domain, and MAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3149_Mixed,_incl._CUB_domain,_and_MAM_domain


id: CL:3166
description: Mixed, incl. Cytoskeletal motor activity, and CHAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3166_Mixed,_incl._Cytoskeletal_motor_activity,_and_CHAT_domain


id: CL:3176
description: Mixed, incl. LVIVD repeat, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3176_Mixed,_incl._LVIVD_repeat,_and_SnoaL-like_domain


id: CL:3194
description: Mixed, incl. Alanine catabolic process, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3194_Mixed,_incl._Alanine_catabolic_process,_and_Polyamine_metabolic_process


id: CL:3207
description: Mixed, incl. Subtilase family, and Metallopeptidase, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3207_Mixed,_incl._Subtilase_family,_and_Metallopeptidase,_catalytic_domain_superfamily


id: CL:3209
description: Mixed, incl. Subtilase family, and Ion transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3209_Mixed,_incl._Subtilase_family,_and_Ion_transport_protein


id: CL:321
description: Ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:321_Ribosomal_subunit,_and_rRNA-binding


id: CL:3210
description: Subtilase family, and Pregnancy-associated plasma protein-A
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3210_Subtilase_family,_and_Pregnancy-associated_plasma_protein-A


id: CL:3224
description: Mixed, incl. Pregnancy-associated plasma protein-A, and P domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3224_Mixed,_incl._Pregnancy-associated_plasma_protein-A,_and_P_domain


id: CL:3235
description: Mixed, incl. Ion transport protein, and Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3235_Mixed,_incl._Ion_transport_protein,_and_Infection_with_Mycobacterium_tuberculosis


id: CL:3256
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3256_Mixed,_incl._Penicillin_and_cephalosporin_biosynthesis,_and_Long-chain_fatty_acid_transporter_activity

description:
  Mixed, incl. Penicillin and cephalosporin biosynthesis, and Long-chain fatty acid transporter activity


id: CL:3268
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3268_Mixed,_incl._CNNM,_transmembrane_domain,_and_Carbohydrate_derivative_transmembrane_transporter_activity

description:
  Mixed, incl. CNNM, transmembrane domain, and Carbohydrate derivative transmembrane transporter activity


id: CL:3281
description: Mixed, incl. Glycerophospholipid metabolism, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3281_Mixed,_incl._Glycerophospholipid_metabolism,_and_NodB_homology_domain


id: CL:3283
description: Mixed, incl. NodB homology domain, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3283_Mixed,_incl._NodB_homology_domain,_and_Methyltransferase_domain


id: CL:330
description: Large ribosomal subunit, and Nucleotide-binding alpha-beta plait domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:330_Large_ribosomal_subunit,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily


id: CL:3316
description: Mixed, incl. Protein of unknown function DUF4249, and Aminopeptidase N-like , N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3316_Mixed,_incl._Protein_of_unknown_function_DUF4249,_and_Aminopeptidase_N-like_,_N-terminal_domain


id: CL:3330
description: Mostly uncharacterized, incl. Aminopeptidase activity, and Fatty acid desaturase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3330_Mostly_uncharacterized,_incl._Aminopeptidase_activity,_and_Fatty_acid_desaturase


id: CL:3331
description: Mostly uncharacterized, incl. Aminopeptidase activity, and Acid-thiol ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3331_Mostly_uncharacterized,_incl._Aminopeptidase_activity,_and_Acid-thiol_ligase_activity


id: CL:3332
description: Mixed, incl. Aminopeptidase activity, and Acid-thiol ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3332_Mixed,_incl._Aminopeptidase_activity,_and_Acid-thiol_ligase_activity


id: CL:3334
description: Mixed, incl. Acid-thiol ligase activity, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3334_Mixed,_incl._Acid-thiol_ligase_activity,_and_Peptidase_M42


id: CL:3337
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3337_Mixed,_incl._ANL,_N-terminal_domain,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. ANL, N-terminal domain, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


id: CL:3352
description: Mixed, incl. GlcNAc-PI de-N-acetylase, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3352_Mixed,_incl._GlcNAc-PI_de-N-acetylase,_and_Enzyme_binding


id: CL:3367
description: Mixed, incl. DinB-like domain, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3367_Mixed,_incl._DinB-like_domain,_and_DNA_replication_initiation


id: CL:3381
description: Mostly uncharacterized, incl. MarR-type HTH domain, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3381_Mostly_uncharacterized,_incl._MarR-type_HTH_domain,_and_Serine_aminopeptidase,_S33


id: CL:3383
description: Mixed, incl. MarR-type HTH domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3383_Mixed,_incl._MarR-type_HTH_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3399
description: Mixed, incl. Cytochrome-c oxidase activity, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3399_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Thioredoxin-like_superfamily


id: CL:3410
description: Fatty acid desaturase, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3410_Fatty_acid_desaturase,_and_Organelle_membrane


id: CL:3425
description: Mixed, incl. Protein lipoylation, and Pseudouridine synthase, RluC/RluD
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3425_Mixed,_incl._Protein_lipoylation,_and_Pseudouridine_synthase,_RluC/RluD


id: CL:3427
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3427_Mixed,_incl._Metallodipeptidase_activity,_and_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.

description:
  Mixed, incl. Metallodipeptidase activity, and Metal dependent phosphohydrolases with conserved HD motif.


id: CL:3441
description: Protein lipoylation, and Pseudouridine synthase, RluC/RluD
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3441_Protein_lipoylation,_and_Pseudouridine_synthase,_RluC/RluD


id: CL:345
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:345_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:3450
description: Mostly uncharacterized, incl. Nucleus, and POTRA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3450_Mostly_uncharacterized,_incl._Nucleus,_and_POTRA_domain


id: CL:3451
description: Mostly uncharacterized, incl. Rhomboid family, and Pentosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3451_Mostly_uncharacterized,_incl._Rhomboid_family,_and_Pentosyltransferase_activity


id: CL:3454
description: Mixed, incl. Rhomboid family, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3454_Mixed,_incl._Rhomboid_family,_and_rRNA_methyltransferase_activity


id: CL:3473
description: Mixed, incl. Regulation of DNA recombination, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3473_Mixed,_incl._Regulation_of_DNA_recombination,_and_Alanine_racemase,_N-terminal


id: CL:3489
description: Mostly uncharacterized, incl. SPOR domain, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3489_Mostly_uncharacterized,_incl._SPOR_domain,_and_YceI-like_domain


id: CL:3492
description: Mixed, incl. DNA2/NAM7 helicase, helicase domain, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3492_Mixed,_incl._DNA2/NAM7_helicase,_helicase_domain,_and_Peroxiredoxin,_AhpC-type


id: CL:3505
description: Mixed, incl. SPOR domain, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3505_Mixed,_incl._SPOR_domain,_and_YceI-like_domain


id: CL:3518
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3518_Mostly_uncharacterized,_incl._Protein_transport,_and_Von_Willebrand_factor_A-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Protein transport, and Von Willebrand factor A-like domain superfamily


id: CL:3519
description: Mixed, incl. Protein transport, and AsmA family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3519_Mixed,_incl._Protein_transport,_and_AsmA_family


id: CL:3521
description: Mixed, incl. Protein transport, and Patched family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3521_Mixed,_incl._Protein_transport,_and_Patched_family


id: CL:3522
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3522_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_Signal_peptide_processing


id: CL:3525
description: Biopolymer transport protein ExbD/TolR, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3525_Biopolymer_transport_protein_ExbD/TolR,_and_MotA/TolQ/ExbB_proton_channel


id: CL:3545
description: Biopolymer transport protein ExbD/TolR, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3545_Biopolymer_transport_protein_ExbD/TolR,_and_MotA/TolQ/ExbB_proton_channel


id: CL:3563
description: Mostly uncharacterized, incl. AsmA family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3563_Mostly_uncharacterized,_incl._AsmA_family


id: CL:3574
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and BatD DUF11 like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3574_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_BatD_DUF11_like_domain


id: CL:3576
description: Mixed, incl. BatD DUF11 like domain, and Aerotolerance regulator N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3576_Mixed,_incl._BatD_DUF11_like_domain,_and_Aerotolerance_regulator_N-terminal


id: CL:3579
description: Mixed, incl. Aerotolerance regulator N-terminal, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3579_Mixed,_incl._Aerotolerance_regulator_N-terminal,_and_ATPase,_AAA-3


id: CL:3603
description: Mixed, incl. Endomembrane system, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3603_Mixed,_incl._Endomembrane_system,_and_Sulfur_metabolism


id: CL:3617
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3617_Mostly_uncharacterized,_incl._Endonuclease/exonuclease/phosphatase,_and_Siderophore_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Endonuclease/exonuclease/phosphatase, and Siderophore transmembrane transporter activity


id: CL:3618
description: Mixed, incl. Endonuclease/exonuclease/phosphatase, and Single-stranded RNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3618_Mixed,_incl._Endonuclease/exonuclease/phosphatase,_and_Single-stranded_RNA_binding


id: CL:3620
description: Mixed, incl. Endonuclease/exonuclease/phosphatase, and Single-stranded RNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3620_Mixed,_incl._Endonuclease/exonuclease/phosphatase,_and_Single-stranded_RNA_binding


id: CL:3622
description: Mixed, incl. Carbohydrate-binding-like fold, and Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3622_Mixed,_incl._Carbohydrate-binding-like_fold,_and_Endonuclease/exonuclease/phosphatase


id: CL:3647
description: Mixed, incl. Thioredoxin-like fold, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3647_Mixed,_incl._Thioredoxin-like_fold,_and_SGNH_hydrolase_superfamily


id: CL:3660
description: Mixed, incl. ABC3 transporter permease protein domain, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3660_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_Outer_membrane_efflux_protein


id: CL:3661
description: Mixed, incl. ABC3 transporter permease protein domain, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3661_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_Outer_membrane_efflux_protein


id: CL:3662
description: Mixed, incl. ABC3 transporter permease protein domain, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3662_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_Outer_membrane_efflux_protein


id: CL:3663
description: Mixed, incl. ABC3 transporter permease protein domain, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3663_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_Outer_membrane_efflux_protein


id: CL:3665
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3665_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:3667
description: Mixed, incl. Cationic antimicrobial peptide (CAMP) resistance, and Acriflavin resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3667_Mixed,_incl._Cationic_antimicrobial_peptide_(CAMP)_resistance,_and_Acriflavin_resistance_protein


id: CL:3669
description: Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3669_Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:368
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:368_Structural_constituent_of_ribosome


id: CL:3714
description: Mixed, incl. ABC-2 type transporter, and Membrane fusion protein, biotin-lipoyl like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3714_Mixed,_incl._ABC-2_type_transporter,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain


id: CL:3734
description: Mixed, incl. Response to antibiotic, and CorA, cytoplasmic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3734_Mixed,_incl._Response_to_antibiotic,_and_CorA,_cytoplasmic_domain


id: CL:3736
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3736_Mixed,_incl._Establishment_of_competence_for_transformation,_and_Phospholipid/glycerol_acyltransferase

description:
  Mixed, incl. Establishment of competence for transformation, and Phospholipid/glycerol acyltransferase


id: CL:3748
description: Mixed, incl. CorA, cytoplasmic domain, and Heme transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3748_Mixed,_incl._CorA,_cytoplasmic_domain,_and_Heme_transmembrane_transport


id: CL:3759
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3759_Mostly_uncharacterized,_incl._Di-c-type_haem_protein,_MauG/cytochrome_c_peroxidase,_and_Methanobactin_biosynthesis_cassette_protein_MbnP-like

description:
  Mostly uncharacterized, incl. Di-c-type haem protein, MauG/cytochrome c peroxidase, and Methanobactin biosynthesis cassette protein MbnP-like


id: CL:3760
description: Mostly uncharacterized, incl. Thioesterase superfamily, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3760_Mostly_uncharacterized,_incl._Thioesterase_superfamily,_and_Diol_metabolic_process


id: CL:3763
description: Mostly uncharacterized, incl. Diol metabolic process, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3763_Mostly_uncharacterized,_incl._Diol_metabolic_process,_and_MarR-type_HTH_domain


id: CL:3766
description: Mixed, incl. Diol metabolic process, and Methanobactin biosynthesis cassette protein MbnP-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3766_Mixed,_incl._Diol_metabolic_process,_and_Methanobactin_biosynthesis_cassette_protein_MbnP-like


id: CL:3792
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3792_Mixed,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_Di-c-type_haem_protein,_MauG/cytochrome_c_peroxidase

description:
  Mixed, incl. Cytosolic acyl coenzyme A thioester hydrolase, and Di-c-type haem protein, MauG/cytochrome c peroxidase


id: CL:3803
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3803_Mixed,_incl._Di-c-type_haem_protein,_MauG/cytochrome_c_peroxidase,_and_Methanobactin_biosynthesis_cassette_protein_MbnP-like

description:
  Mixed, incl. Di-c-type haem protein, MauG/cytochrome c peroxidase, and Methanobactin biosynthesis cassette protein MbnP-like


id: CL:3818
description: Mixed, incl. De novo IMP biosynthetic process, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3818_Mixed,_incl._De_novo_IMP_biosynthetic_process,_and_SnoaL-like_domain


id: CL:3821
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3821_De_novo_IMP_biosynthetic_process


id: CL:3834
description: Mixed, incl. Toxin metabolic process, and Thioredoxin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3834_Mixed,_incl._Toxin_metabolic_process,_and_Thioredoxin-like


id: CL:3843
description: Mostly uncharacterized, incl. Peptidase PrsW, archaeal/bacterial, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3843_Mostly_uncharacterized,_incl._Peptidase_PrsW,_archaeal/bacterial,_and_Damaged_DNA_binding


id: CL:3846
description: Mostly uncharacterized, incl. ApbE family, and UvrB, interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3846_Mostly_uncharacterized,_incl._ApbE_family,_and_UvrB,_interaction_domain


id: CL:3847
description: Mostly uncharacterized, incl. ApbE family, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3847_Mostly_uncharacterized,_incl._ApbE_family,_and_ATPase,_AAA-3


id: CL:3848
description: Mixed, incl. ATPase, AAA-3, and Domain of unknown function DUF58
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3848_Mixed,_incl._ATPase,_AAA-3,_and_Domain_of_unknown_function_DUF58


id: CL:3851
description: Mixed, incl. Domain of unknown function DUF58, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3851_Mixed,_incl._Domain_of_unknown_function_DUF58,_and_Sporulation


id: CL:3868
description: Mixed, incl. ApbE family, and Thioredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3868_Mixed,_incl._ApbE_family,_and_Thioredoxin-like_domain


id: CL:3880
description: Mixed, incl. UvrB, interaction domain, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3880_Mixed,_incl._UvrB,_interaction_domain,_and_DNA_catabolic_process


id: CL:3898
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3898_Mixed,_incl._DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_Regulation_of_response_to_stimulus

description:
  Mixed, incl. DNA recombination and repair protein RecA-like, ATP-binding domain, and Regulation of response to stimulus


id: CL:3914
description: Mostly uncharacterized, incl. Chloride transport, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3914_Mostly_uncharacterized,_incl._Chloride_transport,_and_NAD+_kinase_activity


id: CL:3916
description: Mixed, incl. Pyridoxal phosphate-dependent decarboxylase, and Protein of unknown function DUF2490
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3916_Mixed,_incl._Pyridoxal_phosphate-dependent_decarboxylase,_and_Protein_of_unknown_function_DUF2490


id: CL:3935
description: Mixed, incl. Chloride transport, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3935_Mixed,_incl._Chloride_transport,_and_NAD+_kinase_activity


id: CL:3951
description: Mixed, incl. PGBD superfamily, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3951_Mixed,_incl._PGBD_superfamily,_and_DUF218_domain


id: CL:3953
description: Mixed, incl. M61 glycyl aminopeptidase, and Sporulation-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3953_Mixed,_incl._M61_glycyl_aminopeptidase,_and_Sporulation-like_domain_superfamily


id: CL:3969
description: Mixed, incl. AAA domain, group 15, and Caspase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3969_Mixed,_incl._AAA_domain,_group_15,_and_Caspase_domain


id: CL:3978
description: Mostly uncharacterized, incl. Rhs repeat-associated core, and Bacteriophage T4, Gp19, tail tube
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3978_Mostly_uncharacterized,_incl._Rhs_repeat-associated_core,_and_Bacteriophage_T4,_Gp19,_tail_tube


id: CL:398
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:398_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:3980
description: Mostly uncharacterized, incl. Rhs repeat-associated core, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3980_Mostly_uncharacterized,_incl._Rhs_repeat-associated_core,_and_Secretion


id: CL:3981
description: Mostly uncharacterized, incl. Rhs repeat-associated core, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3981_Mostly_uncharacterized,_incl._Rhs_repeat-associated_core,_and_Secretion


id: CL:3982
description: Mixed, incl. Rhs repeat-associated core, and Uncharacterised protein family (UPF0227)
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3982_Mixed,_incl._Rhs_repeat-associated_core,_and_Uncharacterised_protein_family_(UPF0227)


id: CL:3983
description: Mixed, incl. Rhs repeat-associated core, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3983_Mixed,_incl._Rhs_repeat-associated_core,_and_HTH-like_domain


id: CL:3984
description: Mostly uncharacterized, incl. Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3984_Mostly_uncharacterized,_incl._Rhs_repeat-associated_core


id: CL:3995
description: Mixed, incl. HTH-like domain, and Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:3995_Mixed,_incl._HTH-like_domain,_and_Rhs_repeat-associated_core


id: CL:4007
description: Mixed, incl. Rhs repeat-associated core, and Uncharacterised protein family (UPF0227)
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4007_Mixed,_incl._Rhs_repeat-associated_core,_and_Uncharacterised_protein_family_(UPF0227)


id: CL:4019
description: Mixed, incl. Secretion, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4019_Mixed,_incl._Secretion,_and_Response_to_host


id: CL:4020
description: Mixed, incl. Secretion, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4020_Mixed,_incl._Secretion,_and_Immunoglobulin-like_fold


id: CL:4022
description: Secretion, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4022_Secretion,_and_Immunoglobulin-like_fold


id: CL:4042
description: Mixed, incl. Response to host, and Chaperone protein Skp
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4042_Mixed,_incl._Response_to_host,_and_Chaperone_protein_Skp


id: CL:4053
description: Mixed, incl. Rhs repeat-associated core, and Kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4053_Mixed,_incl._Rhs_repeat-associated_core,_and_Kinase_activity


id: CL:4070
description: Mostly uncharacterized, incl. Bacteriophage T4, Gp19, tail tube, and Chitinase II
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4070_Mostly_uncharacterized,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Chitinase_II


id: CL:4071
description: Mixed, incl. Bacteriophage T4, Gp19, tail tube, and Chitinase II
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4071_Mixed,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Chitinase_II


id: CL:4073
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4073_Mixed,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Contractile_injection_system_tube_protein,_N-terminal_domain

description:
  Mixed, incl. Bacteriophage T4, Gp19, tail tube, and Contractile injection system tube protein, N-terminal domain


id: CL:4077
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4077_Mixed,_incl._Conserved_hypothetical_protein_CHP02241,_and_Contractile_injection_system_tube_protein,_N-terminal_domain

description:
  Mixed, incl. Conserved hypothetical protein CHP02241, and Contractile injection system tube protein, N-terminal domain


id: CL:4081
description: Mixed, incl. tryptophan-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4081_Mixed,_incl._tryptophan-tRNA_ligase_activity


id: CL:411
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:411_RNA_polymerase,_and_Transcription_termination


id: CL:4115
description: Mixed, incl. Chaperone J-domain superfamily, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4115_Mixed,_incl._Chaperone_J-domain_superfamily,_and_Lysin_motif


id: CL:4133
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4133_Mostly_uncharacterized,_incl._Glycerophospholipid_metabolism,_and_Cellular_carbohydrate_metabolic_process

description:
  Mostly uncharacterized, incl. Glycerophospholipid metabolism, and Cellular carbohydrate metabolic process


id: CL:4134
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4134_Mostly_uncharacterized,_incl._Telomere_recombination,_and_Cyclic_nucleotide-monophosphate_binding_domain

description:
  Mostly uncharacterized, incl. Telomere recombination, and Cyclic nucleotide-monophosphate binding domain


id: CL:4135
description: Mostly uncharacterized, incl. Telomere recombination, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4135_Mostly_uncharacterized,_incl._Telomere_recombination,_and_Phosphate_ion_binding


id: CL:4136
description: Mixed, incl. Telomere recombination, and Rossmann-like alpha/beta/alpha sandwich fold
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4136_Mixed,_incl._Telomere_recombination,_and_Rossmann-like_alpha/beta/alpha_sandwich_fold


id: CL:4151
description: Mixed, incl. Phosphate ion binding, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4151_Mixed,_incl._Phosphate_ion_binding,_and_Acetyltransferase_(GNAT)_domain


id: CL:4166
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4166_Mixed,_incl._Cyclic_nucleotide-monophosphate_binding_domain,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel

description:
  Mixed, incl. Cyclic nucleotide-monophosphate binding domain, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel


id: CL:4177
description: Mixed, incl. Alditol phosphate metabolic process, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4177_Mixed,_incl._Alditol_phosphate_metabolic_process,_and_Glycerophospholipid_metabolism


id: CL:4178
description: Mixed, incl. Alditol phosphate metabolic process, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4178_Mixed,_incl._Alditol_phosphate_metabolic_process,_and_Glycerophospholipid_metabolism


id: CL:4180
description: Alditol phosphate metabolic process, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4180_Alditol_phosphate_metabolic_process,_and_CDP-diacylglycerol_metabolic_process


id: CL:4202
description: Mixed, incl. Beta-lactamase, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4202_Mixed,_incl._Beta-lactamase,_and_Glycosyl_transferase_family_2


id: CL:4212
description: Mostly uncharacterized, incl. LVIVD repeat, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4212_Mostly_uncharacterized,_incl._LVIVD_repeat,_and_LexA-like


id: CL:4213
description: Mixed, incl. LexA-like, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4213_Mixed,_incl._LexA-like,_and_Nitroreductase


id: CL:4226
description: Mixed, incl. LVIVD repeat, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4226_Mixed,_incl._LVIVD_repeat,_and_Tetratricopeptide_repeat


id: CL:4235
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4235_Mostly_uncharacterized,_incl._Intracellular_protein-containing_complex,_and_Oxidative_phosphorylation

description:
  Mostly uncharacterized, incl. Intracellular protein-containing complex, and Oxidative phosphorylation


id: CL:4236
description: Mixed, incl. Intracellular protein-containing complex, and Protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4236_Mixed,_incl._Intracellular_protein-containing_complex,_and_Protein_binding


id: CL:4237
description: Mixed, incl. Intracellular protein-containing complex, and Protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4237_Mixed,_incl._Intracellular_protein-containing_complex,_and_Protein_binding


id: CL:4238
description: Mostly uncharacterized, incl. Protein polymerization, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4238_Mostly_uncharacterized,_incl._Protein_polymerization,_and_Band_7_domain


id: CL:4239
description: Mixed, incl. Protein polymerization, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4239_Mixed,_incl._Protein_polymerization,_and_Carboxypeptidase


id: CL:4254
description: Mixed, incl. Band 7 domain, and Putative sensory transduction regulator YbjN
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4254_Mixed,_incl._Band_7_domain,_and_Putative_sensory_transduction_regulator_YbjN


id: CL:4266
description: McrBC 5-methylcytosine restriction system component, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4266_McrBC_5-methylcytosine_restriction_system_component,_and_ATPase,_dynein-related,_AAA_domain


id: CL:4283
description: Mixed, incl. Thiol protease, and TaqI-like C-terminal specificity domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4283_Mixed,_incl._Thiol_protease,_and_TaqI-like_C-terminal_specificity_domain


id: CL:4300
description: Mixed, incl. Oxidative phosphorylation, and His-Me finger superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4300_Mixed,_incl._Oxidative_phosphorylation,_and_His-Me_finger_superfamily


id: CL:4316
description: Mixed, incl. Regulation of cellular process, and Small molecule biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4316_Mixed,_incl._Regulation_of_cellular_process,_and_Small_molecule_biosynthetic_process


id: CL:4317
description: Mixed, incl. Regulation of cellular process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4317_Mixed,_incl._Regulation_of_cellular_process,_and_Lipid_transport


id: CL:4318
description: Mixed, incl. Regulation of cellular process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4318_Mixed,_incl._Regulation_of_cellular_process,_and_Lipid_transport


id: CL:4319
description: Mixed, incl. Regulation of cellular process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4319_Mixed,_incl._Regulation_of_cellular_process,_and_Lipid_transport


id: CL:4320
description: Regulation of cellular process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4320_Regulation_of_cellular_process,_and_Lipid_transport


id: CL:4321
description: Mixed, incl. Signaling, and Positive regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4321_Mixed,_incl._Signaling,_and_Positive_regulation_of_RNA_metabolic_process


id: CL:4323
description: Mixed, incl. Phosphorelay signal transduction system, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4323_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Bacterial_chemotaxis


id: CL:4324
description: Phosphorelay signal transduction system, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4324_Phosphorelay_signal_transduction_system,_and_Bacterial_chemotaxis


id: CL:4326
description: Phosphorelay signal transduction system, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4326_Phosphorelay_signal_transduction_system,_and_Bacterial_chemotaxis


id: CL:4327
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4327_Phosphorelay_signal_transduction_system


id: CL:4330
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4330_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_Signal_transduction_response_regulator,_C-terminal_effector

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and Signal transduction response regulator, C-terminal effector


id: CL:4332
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4332_OmpR/PhoB-type_DNA-binding_domain,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  OmpR/PhoB-type DNA-binding domain, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:4388
description: Mixed, incl. Sodium/solute symporter, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4388_Mixed,_incl._Sodium/solute_symporter,_and_Pore_complex


id: CL:4401
description: Mixed, incl. RNA polymerase sigma factor 54 interaction domain, and RNA polymerase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4401_Mixed,_incl._RNA_polymerase_sigma_factor_54_interaction_domain,_and_RNA_polymerase_complex


id: CL:4423
description: Mixed, incl. STAS domain, and Protein serine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4423_Mixed,_incl._STAS_domain,_and_Protein_serine_kinase_activity


id: CL:4424
description: Mixed, incl. STAS domain, and Protein serine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4424_Mixed,_incl._STAS_domain,_and_Protein_serine_kinase_activity


id: CL:4425
description: Mixed, incl. STAS domain, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4425_Mixed,_incl._STAS_domain,_and_Phospholipid_transport


id: CL:4427
description: STAS domain, and Sigma factor PP2C-like phosphatases
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4427_STAS_domain,_and_Sigma_factor_PP2C-like_phosphatases


id: CL:4430
description: Mixed, incl. Sigma factor PP2C-like phosphatases, and Anti-sigma factor antagonist
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4430_Mixed,_incl._Sigma_factor_PP2C-like_phosphatases,_and_Anti-sigma_factor_antagonist


id: CL:4453
description: Phospholipid transport, and Globin/Protoglobin
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4453_Phospholipid_transport,_and_Globin/Protoglobin


id: CL:4466
description: Mixed, incl. STAS domain, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4466_Mixed,_incl._STAS_domain,_and_RNA_3-end_processing


id: CL:4479
description: Mixed, incl. Globin-sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4479_Mixed,_incl._Globin-sensor_domain


id: CL:4494
description: Mixed, incl. Transmembrane signaling receptor activity, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4494_Mixed,_incl._Transmembrane_signaling_receptor_activity,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4535
description: Mixed, incl. Horizontal gene transfer, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4535_Mixed,_incl._Horizontal_gene_transfer,_and_Rhomboid_family


id: CL:4537
description: Mixed, incl. Rhomboid family, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4537_Mixed,_incl._Rhomboid_family,_and_Horizontal_gene_transfer


id: CL:4538
description: Mixed, incl. Horizontal gene transfer, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4538_Mixed,_incl._Horizontal_gene_transfer,_and_Helix-hairpin-helix_motif


id: CL:4541
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4541_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:4558
description: Mixed, incl. Rhomboid family, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4558_Mixed,_incl._Rhomboid_family,_and_MPN_domain


id: CL:4585
description: Mixed, incl. Thiamine metabolic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4585_Mixed,_incl._Thiamine_metabolic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:4587
description: Thiamine metabolic process, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4587_Thiamine_metabolic_process,_and_Sulfur_relay_system


id: CL:4588
description: Thiamine metabolic process, and Metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4588_Thiamine_metabolic_process,_and_Metal_ion_transmembrane_transporter_activity


id: CL:4611
description: Sulfur relay system, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4611_Sulfur_relay_system,_and_MPN_domain


id: CL:4628
description: Ubiquinone and other terpenoid-quinone biosynthesis, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4628_Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Phosphoglycerate_mutase_family


id: CL:4629
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4629_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:4642
description: Mixed, incl. Menaquinone biosynthesis, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4642_Mixed,_incl._Menaquinone_biosynthesis,_and_Phosphoglycerate_mutase_family


id: CL:4661
description: Mixed, incl. Bacterial Ig-like domain 2, and Heme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4661_Mixed,_incl._Bacterial_Ig-like_domain_2,_and_Heme_metabolic_process


id: CL:4662
description: Mixed, incl. Heme metabolic process, and M61 glycyl aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4662_Mixed,_incl._Heme_metabolic_process,_and_M61_glycyl_aminopeptidase


id: CL:4663
description: Mixed, incl. M61 glycyl aminopeptidase, and Heme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4663_Mixed,_incl._M61_glycyl_aminopeptidase,_and_Heme_metabolic_process


id: CL:4674
description: Mixed, incl. Alanine catabolic process, and Thioesterase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4674_Mixed,_incl._Alanine_catabolic_process,_and_Thioesterase-like_superfamily


id: CL:4684
description: Mixed, incl. Bacterial Ig-like domain 2, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4684_Mixed,_incl._Bacterial_Ig-like_domain_2,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:4701
description: Mixed, incl. Protein catabolic process, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4701_Mixed,_incl._Protein_catabolic_process,_and_OsmC/Ohr_family


id: CL:4702
description: Mixed, incl. Protein catabolic process, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4702_Mixed,_incl._Protein_catabolic_process,_and_OsmC/Ohr_family


id: CL:4715
description: Mixed, incl. WYL domain, and Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4715_Mixed,_incl._WYL_domain,_and_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)


id: CL:4729
description: Mixed, incl. Response to stress, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4729_Mixed,_incl._Response_to_stress,_and_Tetratricopeptide_repeats


id: CL:4730
description: Mixed, incl. Response to stress, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4730_Mixed,_incl._Response_to_stress,_and_Tetratricopeptide_repeats


id: CL:4731
description: Mixed, incl. Response to stress, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4731_Mixed,_incl._Response_to_stress,_and_Tetratricopeptide_repeats


id: CL:4732
description: Mostly uncharacterized, incl. Tetratricopeptide repeats, and Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4732_Mostly_uncharacterized,_incl._Tetratricopeptide_repeats,_and_Double-strand_break_repair


id: CL:4733
description: Mixed, incl. Tetratricopeptide repeats, and Protein phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4733_Mixed,_incl._Tetratricopeptide_repeats,_and_Protein_phosphorylation


id: CL:4735
description: Mixed, incl. Tetratricopeptide repeats, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4735_Mixed,_incl._Tetratricopeptide_repeats,_and_Protein_kinase_domain


id: CL:4737
description: Mixed, incl. Tetratricopeptide repeats, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4737_Mixed,_incl._Tetratricopeptide_repeats,_and_Protein_kinase_domain


id: CL:4739
description: Mixed, incl. Tetratricopeptide repeats, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4739_Mixed,_incl._Tetratricopeptide_repeats,_and_Protein_kinase_domain


id: CL:4741
description: Mixed, incl. Tetratricopeptide repeats, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4741_Mixed,_incl._Tetratricopeptide_repeats,_and_Protein_kinase_domain


id: CL:4742
description: Mixed, incl. Protein kinase domain, and SHOCT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4742_Mixed,_incl._Protein_kinase_domain,_and_SHOCT_domain


id: CL:4744
description: Mixed, incl. Protein kinase domain, and SHOCT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4744_Mixed,_incl._Protein_kinase_domain,_and_SHOCT_domain


id: CL:4762
description: Mixed, incl. Rhomboid family, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4762_Mixed,_incl._Rhomboid_family,_and_ATPase,_dynein-related,_AAA_domain


id: CL:4772
description: Tetratricopeptide repeats, and Pentapeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4772_Tetratricopeptide_repeats,_and_Pentapeptide_repeat


id: CL:4803
description: Mostly uncharacterized, incl. Peptidase M15C, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4803_Mostly_uncharacterized,_incl._Peptidase_M15C,_and_Zinc_finger,_SWIM-type


id: CL:4805
description: Mixed, incl. Peptidase M15C, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4805_Mixed,_incl._Peptidase_M15C,_and_Zinc_finger,_SWIM-type


id: CL:4821
description: Mixed, incl. Caspase domain, and CHAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4821_Mixed,_incl._Caspase_domain,_and_CHAT_domain


id: CL:4841
description: Mixed, incl. Papain-like cysteine peptidase superfamily, and CHAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4841_Mixed,_incl._Papain-like_cysteine_peptidase_superfamily,_and_CHAT_domain


id: CL:4873
description: Mixed, incl. WG containing repeat, and WD40 repeat, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4873_Mixed,_incl._WG_containing_repeat,_and_WD40_repeat,_conserved_site


id: CL:4875
description: Mixed, incl. WG containing repeat, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4875_Mixed,_incl._WG_containing_repeat,_and_Radical_SAM_superfamily


id: CL:4876
description: WG containing repeat, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4876_WG_containing_repeat,_and_Glycosyl_transferase_family_2


id: CL:4887
description: Mixed, incl. Radical SAM superfamily, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4887_Mixed,_incl._Radical_SAM_superfamily,_and_Glycosyltransferase_Family_4


id: CL:4906
description: Protein of unknown function DUF4836, and WD40 repeat, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4906_Protein_of_unknown_function_DUF4836,_and_WD40_repeat,_conserved_site


id: CL:4916
description: Mixed, incl. Double-strand break repair, and Protein of unknown function DUF4276
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4916_Mixed,_incl._Double-strand_break_repair,_and_Protein_of_unknown_function_DUF4276


id: CL:4917
description: Mixed, incl. Double-strand break repair, and Protein of unknown function DUF4276
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4917_Mixed,_incl._Double-strand_break_repair,_and_Protein_of_unknown_function_DUF4276


id: CL:4918
description: Mixed, incl. DNA synthesis involved in DNA repair, and Protein of unknown function DUF4276
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4918_Mixed,_incl._DNA_synthesis_involved_in_DNA_repair,_and_Protein_of_unknown_function_DUF4276


id: CL:4920
description: Mixed, incl. DNA synthesis involved in DNA repair, and Recombination-promoting nuclease RpnA
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4920_Mixed,_incl._DNA_synthesis_involved_in_DNA_repair,_and_Recombination-promoting_nuclease_RpnA


id: CL:4921
description: Mixed, incl. Recombination-promoting nuclease RpnA, and DNA synthesis involved in DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4921_Mixed,_incl._Recombination-promoting_nuclease_RpnA,_and_DNA_synthesis_involved_in_DNA_repair


id: CL:4924
description: Mixed, incl. Recombination-promoting nuclease RpnA, and RecF-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4924_Mixed,_incl._Recombination-promoting_nuclease_RpnA,_and_RecF-like


id: CL:4944
description: Mixed, incl. DNA synthesis involved in DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4944_Mixed,_incl._DNA_synthesis_involved_in_DNA_repair


id: CL:496
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and Glutamyl/glutaminyl-tRNA synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:496_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_Glutamyl/glutaminyl-tRNA_synthetase


id: CL:4963
description: Protein of unknown function DUF4276, and RecF-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4963_Protein_of_unknown_function_DUF4276,_and_RecF-like


id: CL:4974
description: Mixed, incl. Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4974_Mixed,_incl._Spermidine_synthase_activity


id: CL:4989
description: Mixed, incl. HNH endonuclease, and AAA ATPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:4989_Mixed,_incl._HNH_endonuclease,_and_AAA_ATPase_domain


id: CL:5003
description: Mixed, incl. Response to virus, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5003_Mixed,_incl._Response_to_virus,_and_Glycerophospholipid_metabolism


id: CL:5004
description: Mixed, incl. Response to virus, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5004_Mixed,_incl._Response_to_virus,_and_Glycerophospholipid_metabolism


id: CL:5005
description: Response to virus, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5005_Response_to_virus,_and_AAA_domain


id: CL:5006
description: Response to virus, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5006_Response_to_virus,_and_AAA_domain


id: CL:5010
description: RAMP superfamily, and CRISPR-associated protein, TM1812
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5010_RAMP_superfamily,_and_CRISPR-associated_protein,_TM1812


id: CL:5043
description: Mixed, incl. Intracellular protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5043_Mixed,_incl._Intracellular_protein_transmembrane_transport


id: CL:5053
description: Mixed, incl. Zymogen, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5053_Mixed,_incl._Zymogen,_and_EamA_domain


id: CL:5063
description: Mixed, incl. RNA 5-end processing, and Ribonucleoside-diphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5063_Mixed,_incl._RNA_5-end_processing,_and_Ribonucleoside-diphosphate_reductase_activity


id: CL:5074
description: Mixed, incl. Transposase, IS4-like, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5074_Mixed,_incl._Transposase,_IS4-like,_and_Radical_SAM_superfamily


id: CL:5075
description: Radical SAM superfamily, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5075_Radical_SAM_superfamily,_and_Transposase,_IS4-like


id: CL:5084
description: Mixed, incl. Right handed beta helix domain, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5084_Mixed,_incl._Right_handed_beta_helix_domain,_and_Peroxiredoxin,_AhpC-type


id: CL:5094
description: Mixed, incl. Protein of unknown function DUF819, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5094_Mixed,_incl._Protein_of_unknown_function_DUF819,_and_Chromosome_segregation


id: CL:5112
description: Mixed, incl. Sodium, and Methionine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5112_Mixed,_incl._Sodium,_and_Methionine_biosynthesis


id: CL:5113
description: Mixed, incl. GNAT domain, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5113_Mixed,_incl._GNAT_domain,_and_Homeobox-like_domain_superfamily


id: CL:5114
description: Mixed, incl. Homeobox-like domain superfamily, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5114_Mixed,_incl._Homeobox-like_domain_superfamily,_and_Cyclic_nucleotide-binding_domain


id: CL:5115
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5115_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Lactone_catabolic_process


id: CL:5116
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5116_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Lactone_catabolic_process


id: CL:5127
description: Mixed, incl. rRNA (guanine) methyltransferase activity, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5127_Mixed,_incl._rRNA_(guanine)_methyltransferase_activity,_and_Tail_specific_protease


id: CL:5139
description: Mixed, incl. Penicillin amidase, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5139_Mixed,_incl._Penicillin_amidase,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:5156
description: Acetyltransferase (GNAT) domain, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5156_Acetyltransferase_(GNAT)_domain,_and_dephospho-CoA_kinase_activity


id: CL:5166
description: Mixed, incl. Sodium, and Methionine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5166_Mixed,_incl._Sodium,_and_Methionine_biosynthesis


id: CL:5167
description: Sodium, and S-adenosylmethionine cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5167_Sodium,_and_S-adenosylmethionine_cycle


id: CL:5185
description: S-adenosylmethionine cycle, and Methionine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5185_S-adenosylmethionine_cycle,_and_Methionine_biosynthesis


id: CL:5194
description: Mixed, incl. ApbE family, and Methanobactin biosynthesis cassette protein MbnP-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5194_Mixed,_incl._ApbE_family,_and_Methanobactin_biosynthesis_cassette_protein_MbnP-like


id: CL:5207
description: Mostly uncharacterized, incl. Glutathione metabolism, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5207_Mostly_uncharacterized,_incl._Glutathione_metabolism,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:5208
description: Mixed, incl. Glutathione metabolism, and Succinylglutamate desuccinylase/aspartoacylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5208_Mixed,_incl._Glutathione_metabolism,_and_Succinylglutamate_desuccinylase/aspartoacylase


id: CL:5209
description: Mixed, incl. Glutathione metabolism, and Bactofilin A/B
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5209_Mixed,_incl._Glutathione_metabolism,_and_Bactofilin_A/B


id: CL:5212
description: Mixed, incl. Glutathione metabolism, and Bacterial SH3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5212_Mixed,_incl._Glutathione_metabolism,_and_Bacterial_SH3_domain


id: CL:5216
description: Omega peptidase activity, and RimK-like ATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5216_Omega_peptidase_activity,_and_RimK-like_ATP-grasp_domain


id: CL:5252
description: Mixed, incl. Bactofilin A/B, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5252_Mixed,_incl._Bactofilin_A/B,_and_NodB_homology_domain


id: CL:5283
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5283_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_segregation


id: CL:5285
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5285_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_partition


id: CL:5288
description: Mixed, incl. Chromosome partition, and RecF/RecN/SMC, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5288_Mixed,_incl._Chromosome_partition,_and_RecF/RecN/SMC,_N-terminal


id: CL:529
description: Mixed, incl. RF-1 domain, and OBG-type guanine nucleotide-binding (G) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:529_Mixed,_incl._RF-1_domain,_and_OBG-type_guanine_nucleotide-binding_(G)_domain


id: CL:5316
description: Mixed, incl. Protein of unknown function DUF2490
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5316_Mixed,_incl._Protein_of_unknown_function_DUF2490


id: CL:5328
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5328_Mostly_uncharacterized,_incl._Zinc_chaperone_CobW-like,_C-terminal,_and_UDP-N-acetylglucosamine_metabolic_process

description:
  Mostly uncharacterized, incl. Zinc chaperone CobW-like, C-terminal, and UDP-N-acetylglucosamine metabolic process


id: CL:5330
description: Mixed, incl. Zinc chaperone CobW-like, C-terminal, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5330_Mixed,_incl._Zinc_chaperone_CobW-like,_C-terminal,_and_Tetratricopeptide_repeats


id: CL:5345
description: Mixed, incl. Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5345_Mixed,_incl._Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal


id: CL:5359
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5359_Mostly_uncharacterized,_incl._Periplasmic_binding_protein,_and_Cation_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Periplasmic binding protein, and Cation transmembrane transporter activity


id: CL:5361
description: Mixed, incl. Periplasmic binding protein, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5361_Mixed,_incl._Periplasmic_binding_protein,_and_FecCD_transport_family


id: CL:5364
description: Mixed, incl. FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5364_Mixed,_incl._FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:5384
description: Mixed, incl. Methyltransferase domain, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5384_Mixed,_incl._Methyltransferase_domain,_and_Periplasmic_binding_protein


id: CL:539
description: Mixed, incl. RNA helicase activity, and RNA-binding domain, S1
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:539_Mixed,_incl._RNA_helicase_activity,_and_RNA-binding_domain,_S1


id: CL:5401
description: Mixed, incl. Cation efflux family, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5401_Mixed,_incl._Cation_efflux_family,_and_Heavy-metal-associated_domain


id: CL:5402
description: Mixed, incl. Cation efflux family, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5402_Mixed,_incl._Cation_efflux_family,_and_Heavy-metal-associated_domain


id: CL:5404
description: Cation efflux family, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5404_Cation_efflux_family,_and_Heavy-metal-associated_domain


id: CL:541
description: RNA helicase activity, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:541_RNA_helicase_activity,_and_NUDIX_domain


id: CL:5423
description: Mixed, incl. Nucleoside recognition, and PPIC-type PPIASE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5423_Mixed,_incl._Nucleoside_recognition,_and_PPIC-type_PPIASE_domain


id: CL:5432
description: Mostly uncharacterized, incl. Tail specific protease, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5432_Mostly_uncharacterized,_incl._Tail_specific_protease,_and_AsnC-type_HTH_domain


id: CL:5433
description: Mixed, incl. Tail specific protease, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5433_Mixed,_incl._Tail_specific_protease,_and_AsnC-type_HTH_domain


id: CL:5434
description: Mixed, incl. Tail specific protease, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5434_Mixed,_incl._Tail_specific_protease,_and_Peptidyl-proline_modification


id: CL:5436
description: Tail specific protease, and Trp repressor/replication initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5436_Tail_specific_protease,_and_Trp_repressor/replication_initiator


id: CL:5452
description: Mixed, incl. Tail specific protease, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5452_Mixed,_incl._Tail_specific_protease,_and_Leucine-rich_repeat_domain_superfamily


id: CL:5465
description: Mixed, incl. AsnC-type HTH domain, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5465_Mixed,_incl._AsnC-type_HTH_domain,_and_Calcineurin-like_phosphoesterase


id: CL:5467
description: Mixed, incl. AsnC-type HTH domain, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5467_Mixed,_incl._AsnC-type_HTH_domain,_and_Calcineurin-like_phosphoesterase


id: CL:5487
description: Mixed, incl. Nicotinate phosphoribosyltransferase-like, C-terminal, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5487_Mixed,_incl._Nicotinate_phosphoribosyltransferase-like,_C-terminal,_and_NUDIX_hydrolase


id: CL:5501
description: Mostly uncharacterized, incl. YqgF/RNase H-like domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5501_Mostly_uncharacterized,_incl._YqgF/RNase_H-like_domain,_and_Sulfite_exporter_TauE/SafE


id: CL:5502
description: Mostly uncharacterized, incl. YqgF/RNase H-like domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5502_Mostly_uncharacterized,_incl._YqgF/RNase_H-like_domain,_and_Sulfite_exporter_TauE/SafE


id: CL:5504
description: Mixed, incl. Aldehyde dehydrogenase, cysteine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5504_Mixed,_incl._Aldehyde_dehydrogenase,_cysteine_active_site


id: CL:5520
description: Mixed, incl. YqgF/RNase H-like domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5520_Mixed,_incl._YqgF/RNase_H-like_domain,_and_Sulfite_exporter_TauE/SafE


id: CL:5529
description: Mixed, incl. Flavin reductase like domain, and Calcineurin-like phosphoesterase domain, lpxH-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5529_Mixed,_incl._Flavin_reductase_like_domain,_and_Calcineurin-like_phosphoesterase_domain,_lpxH-type


id: CL:5538
description: Mixed, incl. Queuosine metabolic process, and Aromatic compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5538_Mixed,_incl._Queuosine_metabolic_process,_and_Aromatic_compound_catabolic_process


id: CL:5539
description: Mixed, incl. Tyrosine metabolism, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5539_Mixed,_incl._Tyrosine_metabolism,_and_Exodeoxyribonuclease_VII_complex


id: CL:5540
description: Mixed, incl. Exodeoxyribonuclease VII complex, and GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5540_Mixed,_incl._Exodeoxyribonuclease_VII_complex,_and_GldM_C-terminal_domain


id: CL:5542
description: Exodeoxyribonuclease VII complex, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5542_Exodeoxyribonuclease_VII_complex,_and_KR_domain


id: CL:5555
description: Mixed, incl. GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5555_Mixed,_incl._GldM_C-terminal_domain


id: CL:5565
description: Mixed, incl. Tyrosine metabolism, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5565_Mixed,_incl._Tyrosine_metabolism,_and_Diol_metabolic_process


id: CL:5567
description: Styrene degradation, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5567_Styrene_degradation,_and_Diol_metabolic_process


id: CL:5579
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5579_Mixed,_incl._Fumarylacetoacetase-like,_C-terminal,_and_Concanavalin_A-like_lectin/glucanase_domain_superfamily

description:
  Mixed, incl. Fumarylacetoacetase-like, C-terminal, and Concanavalin A-like lectin/glucanase domain superfamily


id: CL:5588
description: Mixed, incl. Queuosine metabolic process, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5588_Mixed,_incl._Queuosine_metabolic_process,_and_Cell_adhesion


id: CL:5591
description: Mixed, incl. 6-pyruvoyl tetrahydropterin synthase, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5591_Mixed,_incl._6-pyruvoyl_tetrahydropterin_synthase,_and_Cell_adhesion


id: CL:5611
description: Queuosine biosynthesis, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5611_Queuosine_biosynthesis,_and_Methyltransferase_domain


id: CL:5623
description: Mostly uncharacterized, incl. NlpC/P60 family, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5623_Mostly_uncharacterized,_incl._NlpC/P60_family,_and_Lactone_catabolic_process


id: CL:5624
description: Mixed, incl. Protein of unknown function DUF1887, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5624_Mixed,_incl._Protein_of_unknown_function_DUF1887,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:5637
description: Mixed, incl. NlpC/P60 family, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5637_Mixed,_incl._NlpC/P60_family,_and_Lactone_catabolic_process


id: CL:564
description: Mixed, incl. Thioredoxin, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:564_Mixed,_incl._Thioredoxin,_and_RNA_5-end_processing


id: CL:5650
description: Mostly uncharacterized, incl. Sigma factor activity, and YHYH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5650_Mostly_uncharacterized,_incl._Sigma_factor_activity,_and_YHYH_domain


id: CL:5652
description: Mixed, incl. Sigma factor activity, and Negative regulation of biological process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5652_Mixed,_incl._Sigma_factor_activity,_and_Negative_regulation_of_biological_process


id: CL:5654
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5654_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Negative_regulation_of_biological_process

description:
  Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Negative regulation of biological process


id: CL:5655
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5655_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Negative_regulation_of_biological_process

description:
  Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Negative regulation of biological process


id: CL:5657
description: Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Conserved TM helix
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5657_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Conserved_TM_helix


id: CL:5658
description: Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Conserved TM helix
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5658_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Conserved_TM_helix


id: CL:5659
description: Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Conserved TM helix
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5659_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Conserved_TM_helix


id: CL:5662
description: RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5662_RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:5678
description: Mixed, incl. Conserved TM helix, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5678_Mixed,_incl._Conserved_TM_helix,_and_Sigma-70,_region_4


id: CL:5690
description: Mixed, incl. Endonuclease/Exonuclease/phosphatase family, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5690_Mixed,_incl._Endonuclease/Exonuclease/phosphatase_family,_and_Sigma-70,_region_4


id: CL:5716
description: Mixed, incl. Cell motility, and Alpha-2-Macroglobulin
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5716_Mixed,_incl._Cell_motility,_and_Alpha-2-Macroglobulin


id: CL:5733
description: Mostly uncharacterized, incl. MtfA family, and Lysyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5733_Mostly_uncharacterized,_incl._MtfA_family,_and_Lysyltransferase_activity


id: CL:5735
description: Mixed, incl. Lysyltransferase activity, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5735_Mixed,_incl._Lysyltransferase_activity,_and_Sigma-70,_region_4


id: CL:5751
description: Mixed, incl. MtfA family, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5751_Mixed,_incl._MtfA_family,_and_Protein_alkylation


id: CL:576
description: Mixed, incl. RNA methyltransferase TrmH family, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:576_Mixed,_incl._RNA_methyltransferase_TrmH_family,_and_GTP_binding_domain


id: CL:5776
description: Mostly uncharacterized, incl. YHYH domain, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5776_Mostly_uncharacterized,_incl._YHYH_domain,_and_Cell_surface


id: CL:5777
description: Mostly uncharacterized, incl. YHYH domain, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5777_Mostly_uncharacterized,_incl._YHYH_domain,_and_Cell_surface


id: CL:5778
description: Mixed, incl. YHYH domain, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5778_Mixed,_incl._YHYH_domain,_and_Cell_surface


id: CL:5779
description: Mixed, incl. YHYH domain, and EF hand
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5779_Mixed,_incl._YHYH_domain,_and_EF_hand


id: CL:5780
description: Mixed, incl. YHYH domain, and EF hand
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5780_Mixed,_incl._YHYH_domain,_and_EF_hand


id: CL:5782
description: Mixed, incl. YHYH domain, and Protein of unknown function DUF6702
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5782_Mixed,_incl._YHYH_domain,_and_Protein_of_unknown_function_DUF6702


id: CL:579
description: RNA methyltransferase TrmH family, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:579_RNA_methyltransferase_TrmH_family,_and_Septation


id: CL:5801
description: Mixed, incl. YHYH domain, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5801_Mixed,_incl._YHYH_domain,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:5826
description: Mostly uncharacterized, incl. Cell adhesion, and Serine-type carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5826_Mostly_uncharacterized,_incl._Cell_adhesion,_and_Serine-type_carboxypeptidase_activity


id: CL:5827
description: Mixed, incl. Cell adhesion, and Endonuclease/Exonuclease/phosphatase family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5827_Mixed,_incl._Cell_adhesion,_and_Endonuclease/Exonuclease/phosphatase_family


id: CL:5838
description: Mixed, incl. Serine-type carboxypeptidase activity, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5838_Mixed,_incl._Serine-type_carboxypeptidase_activity,_and_Carbohydrate_binding


id: CL:5847
description: Mixed, incl. DDE transposase sub-family, and Dipeptidyl-peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5847_Mixed,_incl._DDE_transposase_sub-family,_and_Dipeptidyl-peptidase_activity


id: CL:5860
description: Mixed, incl. DinB-like domain, and Quinoprotein alcohol dehydrogenase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5860_Mixed,_incl._DinB-like_domain,_and_Quinoprotein_alcohol_dehydrogenase-like_superfamily


id: CL:5871
description: Mostly uncharacterized, incl. Imelysin, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5871_Mostly_uncharacterized,_incl._Imelysin,_and_Bacteriocin_metabolic_process


id: CL:5872
description: Mostly uncharacterized, incl. Imelysin, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5872_Mostly_uncharacterized,_incl._Imelysin,_and_Bacteriocin_metabolic_process


id: CL:5873
description: Mostly uncharacterized, incl. Imelysin, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5873_Mostly_uncharacterized,_incl._Imelysin,_and_Bacteriocin_metabolic_process


id: CL:5874
description: Mixed, incl. Imelysin, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5874_Mixed,_incl._Imelysin,_and_Bacteriocin_metabolic_process


id: CL:5876
description: Mixed, incl. Imelysin, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5876_Mixed,_incl._Imelysin,_and_Bacteriocin_metabolic_process


id: CL:5878
description: Mixed, incl. Imelysin, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5878_Mixed,_incl._Imelysin,_and_Bacteriocin_metabolic_process


id: CL:5881
description: IPPA , imelysin-like domain, and Bacteriocin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5881_IPPA_,_imelysin-like_domain,_and_Bacteriocin_metabolic_process


id: CL:592
description: tRNA wobble base modification, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:592_tRNA_wobble_base_modification,_and_RNA_(guanine-N7)-methylation


id: CL:5932
description: Mixed, incl. Transcription regulator HTH-like, and Metalloendopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5932_Mixed,_incl._Transcription_regulator_HTH-like,_and_Metalloendopeptidase_activity


id: CL:5951
description: Mixed, incl. Peroxiredoxin-like 1, and TraB/PrgY/GumN family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5951_Mixed,_incl._Peroxiredoxin-like_1,_and_TraB/PrgY/GumN_family


id: CL:5969
description: Mixed, incl. MetI-like superfamily, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5969_Mixed,_incl._MetI-like_superfamily,_and_DDE_transposase_sub-family


id: CL:5972
description: Mixed, incl. MetI-like superfamily, and Transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5972_Mixed,_incl._MetI-like_superfamily,_and_Transporter_complex


id: CL:5991
description: Mixed, incl. Nucleoside monophosphate catabolic process, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:5991_Mixed,_incl._Nucleoside_monophosphate_catabolic_process,_and_Alpha/beta_hydrolase_family


id: CL:6002
description: Mixed, incl. Cis-trans isomerase activity, and Alpha/beta hydrolase fold-1
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6002_Mixed,_incl._Cis-trans_isomerase_activity,_and_Alpha/beta_hydrolase_fold-1


id: CL:6004
description: Mixed, incl. Alpha/beta hydrolase fold-1, and GlcNAc-PI de-N-acetylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6004_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_GlcNAc-PI_de-N-acetylase


id: CL:6006
description: Mixed, incl. GlcNAc-PI de-N-acetylase, and Protein peptidyl-prolyl isomerization
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6006_Mixed,_incl._GlcNAc-PI_de-N-acetylase,_and_Protein_peptidyl-prolyl_isomerization


id: CL:6032
description: Mixed, incl. ER-Phagosome pathway, and Cytosolic acyl coenzyme A thioester hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6032_Mixed,_incl._ER-Phagosome_pathway,_and_Cytosolic_acyl_coenzyme_A_thioester_hydrolase


id: CL:6033
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6033_Mixed,_incl._Peptidyl-prolyl_cis-trans_isomerase,_FKBP-type,_N-terminal,_and_Short-chain_dehydrogenase/reductase,_conserved_site

description:
  Mixed, incl. Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal, and Short-chain dehydrogenase/reductase, conserved site


id: CL:6046
description: Mixed, incl. Cytosolic acyl coenzyme A thioester hydrolase, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6046_Mixed,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_ER-Phagosome_pathway


id: CL:6056
description: Mixed, incl. Glycosyltransferase 2-like, and Glycosyltransferase RgtA/B/C/D-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6056_Mixed,_incl._Glycosyltransferase_2-like,_and_Glycosyltransferase_RgtA/B/C/D-like


id: CL:6057
description: Mixed, incl. Glycosyltransferase 2-like, and Glycosyltransferase RgtA/B/C/D-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6057_Mixed,_incl._Glycosyltransferase_2-like,_and_Glycosyltransferase_RgtA/B/C/D-like


id: CL:6058
description: Mixed, incl. Glycosyltransferase RgtA/B/C/D-like, and Protein of unknown function DUF4199
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6058_Mixed,_incl._Glycosyltransferase_RgtA/B/C/D-like,_and_Protein_of_unknown_function_DUF4199


id: CL:6060
description: Mixed, incl. Glycosyltransferase RgtA/B/C/D-like, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6060_Mixed,_incl._Glycosyltransferase_RgtA/B/C/D-like,_and_Glycosyl_transferase_family_2


id: CL:6083
description: Mixed, incl. Transposase, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6083_Mixed,_incl._Transposase,_and_Methyltransferase_domain


id: CL:6099
description: Mixed, incl. Sulfur metabolism, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6099_Mixed,_incl._Sulfur_metabolism,_and_Tetratricopeptide_repeat


id: CL:611
description: Mixed, incl. Chaperone, and Antigen processing-Cross presentation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:611_Mixed,_incl._Chaperone,_and_Antigen_processing-Cross_presentation


id: CL:6122
description: Mostly uncharacterized, incl. Aminopeptidase activity, and Cell communication
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6122_Mostly_uncharacterized,_incl._Aminopeptidase_activity,_and_Cell_communication


id: CL:6123
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6123_Mostly_uncharacterized,_incl._Aminopeptidase_activity,_and_Hydrolase_activity,_acting_on_glycosyl_bonds

description:
  Mostly uncharacterized, incl. Aminopeptidase activity, and Hydrolase activity, acting on glycosyl bonds


id: CL:6124
description: Mixed, incl. Aminopeptidase activity, and Carboxypeptidase regulatory-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6124_Mixed,_incl._Aminopeptidase_activity,_and_Carboxypeptidase_regulatory-like_domain


id: CL:6125
description: Mixed, incl. Aminopeptidase activity, and Parallel beta-helix repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6125_Mixed,_incl._Aminopeptidase_activity,_and_Parallel_beta-helix_repeats


id: CL:6126
description: Mixed, incl. Aminopeptidase activity, and Parallel beta-helix repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6126_Mixed,_incl._Aminopeptidase_activity,_and_Parallel_beta-helix_repeats


id: CL:6127
description: Mostly uncharacterized, incl. Parallel beta-helix repeats, and Peptidase S9, serine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6127_Mostly_uncharacterized,_incl._Parallel_beta-helix_repeats,_and_Peptidase_S9,_serine_active_site


id: CL:6128
description: Mixed, incl. Parallel beta-helix repeats, and Hydrolase activity, hydrolyzing N-glycosyl compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6128_Mixed,_incl._Parallel_beta-helix_repeats,_and_Hydrolase_activity,_hydrolyzing_N-glycosyl_compounds


id: CL:613
description: Mixed, incl. Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:613_Mixed,_incl._Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:6139
description: Mixed, incl. Peptidase S9, serine active site, and Aminopeptidase, leukotriene A4 hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6139_Mixed,_incl._Peptidase_S9,_serine_active_site,_and_Aminopeptidase,_leukotriene_A4_hydrolase-like


id: CL:6149
description: Mixed, incl. Thiol protease, and Dipeptidyl-peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6149_Mixed,_incl._Thiol_protease,_and_Dipeptidyl-peptidase_activity


id: CL:6160
description: Mixed, incl. ABC transporter-like, conserved site, and Transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6160_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Transmembrane_transport


id: CL:618
description: Protein folding chaperone, and GrpE
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:618_Protein_folding_chaperone,_and_GrpE


id: CL:6187
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6187_Mixed,_incl._Sodium:solute_symporter_family,_and_Secondary_active_transmembrane_transporter_activity

description:
  Mixed, incl. Sodium:solute symporter family, and Secondary active transmembrane transporter activity


id: CL:6188
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and CbxX/CfxQ
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6188_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_CbxX/CfxQ


id: CL:6190
description: Hydrolase activity, hydrolyzing O-glycosyl compounds, and Sodium:solute symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6190_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Sodium:solute_symporter_family


id: CL:620
description: Protein folding chaperone, and GrpE
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:620_Protein_folding_chaperone,_and_GrpE


id: CL:6202
description: Mixed, incl. CbxX/CfxQ, and Response to radiation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6202_Mixed,_incl._CbxX/CfxQ,_and_Response_to_radiation


id: CL:6212
description: Symporter activity, and Sodium:solute symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6212_Symporter_activity,_and_Sodium:solute_symporter_family


id: CL:6228
description: Mixed, incl. LytTR DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6228_Mixed,_incl._LytTR_DNA-binding_domain,_and_Histidine_kinase


id: CL:6229
description: Mixed, incl. LytTR DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6229_Mixed,_incl._LytTR_DNA-binding_domain,_and_Histidine_kinase


id: CL:6231
description: Mixed, incl. Histidine kinase, and Outer membrane protein beta-barrel family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6231_Mixed,_incl._Histidine_kinase,_and_Outer_membrane_protein_beta-barrel_family


id: CL:6252
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6252_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system

description:
  Mixed, incl. PD-(D/E)XK nuclease superfamily, and AAA domain, putative AbiEii toxin, Type IV TA system


id: CL:6263
description: Mixed, incl. Formate metabolic process, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6263_Mixed,_incl._Formate_metabolic_process,_and_Sulfate_transport


id: CL:6264
description: Mixed, incl. Formate metabolic process, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6264_Mixed,_incl._Formate_metabolic_process,_and_NlpC/P60_family


id: CL:6265
description: Mixed, incl. Formate metabolic process, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6265_Mixed,_incl._Formate_metabolic_process,_and_NlpC/P60_family


id: CL:6285
description: Mixed, incl. NlpC/P60 family, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6285_Mixed,_incl._NlpC/P60_family,_and_Ferric-uptake_regulator


id: CL:6299
description: Mixed, incl. Cytolysis, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6299_Mixed,_incl._Cytolysis,_and_Penicillin_binding


id: CL:6315
description: Mixed, incl. Sulfate transport, and Carbonate dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6315_Mixed,_incl._Sulfate_transport,_and_Carbonate_dehydratase_activity


id: CL:6317
description: Carbonate dehydratase activity, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6317_Carbonate_dehydratase_activity,_and_Sulfate_transport


id: CL:6336
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6336_Mixed,_incl._Cysteine_and_methionine_metabolism,_and_RNA_polymerase_sigma_factor_54_interaction_domain

description:
  Mixed, incl. Cysteine and methionine metabolism, and RNA polymerase sigma factor 54 interaction domain


id: CL:6337
description: Mixed, incl. Cysteine and methionine metabolism, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6337_Mixed,_incl._Cysteine_and_methionine_metabolism,_and_Endonuclease


id: CL:6338
description: Mixed, incl. GAF domain, and S-adenosylmethionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6338_Mixed,_incl._GAF_domain,_and_S-adenosylmethionine_metabolic_process


id: CL:6349
description: Mixed, incl. DNA alkylation, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6349_Mixed,_incl._DNA_alkylation,_and_Endonuclease


id: CL:6359
description: Mixed, incl. DNA recombination, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6359_Mixed,_incl._DNA_recombination,_and_NAD(P)-binding_domain_superfamily


id: CL:6375
description: Mixed, incl. Cell division, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6375_Mixed,_incl._Cell_division,_and_Peptidoglycan_biosynthesis


id: CL:6377
description: Mostly uncharacterized, incl. Peptidoglycan biosynthesis, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6377_Mostly_uncharacterized,_incl._Peptidoglycan_biosynthesis,_and_ABC_transporter


id: CL:6378
description: Mostly uncharacterized, incl. Undecaprenyl-diphosphatase activity, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6378_Mostly_uncharacterized,_incl._Undecaprenyl-diphosphatase_activity,_and_ABC_transporter


id: CL:6380
description: Mixed, incl. Undecaprenyl-diphosphatase activity, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6380_Mixed,_incl._Undecaprenyl-diphosphatase_activity,_and_Peptidoglycan_biosynthesis


id: CL:6401
description: Mixed, incl. Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6401_Mixed,_incl._Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:6413
description: Mixed, incl. HDIG domain, and Cytokinetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6413_Mixed,_incl._HDIG_domain,_and_Cytokinetic_process


id: CL:6422
description: Mostly uncharacterized, incl. Alginate O-acetyltransferase AlgI, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6422_Mostly_uncharacterized,_incl._Alginate_O-acetyltransferase_AlgI,_and_D-amino_acid_metabolic_process


id: CL:6423
description: Mostly uncharacterized, incl. Alginate O-acetyltransferase AlgI, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6423_Mostly_uncharacterized,_incl._Alginate_O-acetyltransferase_AlgI,_and_D-amino_acid_metabolic_process


id: CL:6424
description: Mostly uncharacterized, incl. D-amino acid metabolic process, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6424_Mostly_uncharacterized,_incl._D-amino_acid_metabolic_process,_and_SGNH_hydrolase_superfamily


id: CL:6426
description: Mixed, incl. SGNH hydrolase superfamily, and Alginate O-acetyltransferase AlgI
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6426_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Alginate_O-acetyltransferase_AlgI


id: CL:6450
description: Mixed, incl. Beta-lactamase, and Alginate O-acetyltransferase AlgI
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6450_Mixed,_incl._Beta-lactamase,_and_Alginate_O-acetyltransferase_AlgI


id: CL:6464
description: Mixed, incl. Domain of unknown function DUF255
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6464_Mixed,_incl._Domain_of_unknown_function_DUF255


id: CL:6474
description: Mixed, incl. Polysaccharide biosynthesis C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6474_Mixed,_incl._Polysaccharide_biosynthesis_C-terminal_domain


id: CL:6490
description: Mostly uncharacterized, incl. LSM domain superfamily, and Nuclear lumen
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6490_Mostly_uncharacterized,_incl._LSM_domain_superfamily,_and_Nuclear_lumen


id: CL:6491
description: Mostly uncharacterized, incl. Nuclear lumen, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6491_Mostly_uncharacterized,_incl._Nuclear_lumen,_and_Zinc_finger,_SWIM-type


id: CL:6492
description: Mostly uncharacterized, incl. Nuclear lumen, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6492_Mostly_uncharacterized,_incl._Nuclear_lumen,_and_Zinc_finger,_SWIM-type


id: CL:6494
description: Mixed, incl. Nuclear lumen, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6494_Mixed,_incl._Nuclear_lumen,_and_Zinc_finger,_SWIM-type


id: CL:6506
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6506_Mixed,_incl._Heavy-metal-associated_domain,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily

description:
  Mixed, incl. Heavy-metal-associated domain, and S-adenosyl-L-methionine-dependent methyltransferase superfamily


id: CL:6517
description: Mixed, incl. Hydrolase activity, acting on ether bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6517_Mixed,_incl._Hydrolase_activity,_acting_on_ether_bonds


id: CL:6526
description: Mixed, incl. LSM domain superfamily, and RibD C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6526_Mixed,_incl._LSM_domain_superfamily,_and_RibD_C-terminal_domain


id: CL:6528
description: Mixed, incl. LSM domain superfamily, and RibD C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6528_Mixed,_incl._LSM_domain_superfamily,_and_RibD_C-terminal_domain


id: CL:6541
description: Mixed, incl. Mechanosensitive ion channel MscS, transmembrane-2, and Plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6541_Mixed,_incl._Mechanosensitive_ion_channel_MscS,_transmembrane-2,_and_Plasma_membrane


id: CL:6553
description: Mostly uncharacterized, incl. Chromosome condensation, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6553_Mostly_uncharacterized,_incl._Chromosome_condensation,_and_Peptidoglycan_binding-like


id: CL:6557
description: Mostly uncharacterized, incl. Chromosome condensation, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6557_Mostly_uncharacterized,_incl._Chromosome_condensation,_and_Peptidoglycan_binding-like


id: CL:6562
description: Mostly uncharacterized, incl. Chromosome condensation, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6562_Mostly_uncharacterized,_incl._Chromosome_condensation,_and_Peptidoglycan_binding-like


id: CL:6565
description: Mixed, incl. Chromosome condensation, and Carboxysome
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6565_Mixed,_incl._Chromosome_condensation,_and_Carboxysome


id: CL:6567
description: Mixed, incl. Chromosome condensation, and Carboxysome
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6567_Mixed,_incl._Chromosome_condensation,_and_Carboxysome


id: CL:6568
description: Mixed, incl. Chromosome condensation, and Transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6568_Mixed,_incl._Chromosome_condensation,_and_Transmembrane_transport


id: CL:6583
description: Mixed, incl. Carboxysome, and Chromosome condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6583_Mixed,_incl._Carboxysome,_and_Chromosome_condensation


id: CL:6608
description: Mixed, incl. Peptidoglycan binding-like, and Undecaprenyl-diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6608_Mixed,_incl._Peptidoglycan_binding-like,_and_Undecaprenyl-diphosphatase_activity


id: CL:662
description: Mixed, incl. ANK repeat, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:662_Mixed,_incl._ANK_repeat,_and_Cyclophilin-like_domain_superfamily


id: CL:6629
description: Mostly uncharacterized, incl. TM2 domain, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6629_Mostly_uncharacterized,_incl._TM2_domain,_and_Epoxide_hydrolase-like


id: CL:6630
description: Mixed, incl. TM2 domain, and Pseudouridine synthase, RluC/RluD
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6630_Mixed,_incl._TM2_domain,_and_Pseudouridine_synthase,_RluC/RluD


id: CL:6632
description: Mixed, incl. Thioredoxin, and Cellular detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6632_Mixed,_incl._Thioredoxin,_and_Cellular_detoxification


id: CL:664
description: ANK repeat, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:664_ANK_repeat,_and_tRNA_wobble_uridine_modification


id: CL:6654
description: Mixed, incl. Epoxide hydrolase-like, and tryptophan-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6654_Mixed,_incl._Epoxide_hydrolase-like,_and_tryptophan-tRNA_ligase_activity


id: CL:6664
description: Mostly uncharacterized, incl. Von Willebrand factor, type A, and TraB/PrgY/GumN family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6664_Mostly_uncharacterized,_incl._Von_Willebrand_factor,_type_A,_and_TraB/PrgY/GumN_family


id: CL:6665
description: Mostly uncharacterized, incl. Von Willebrand factor, type A, and TraB/PrgY/GumN family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6665_Mostly_uncharacterized,_incl._Von_Willebrand_factor,_type_A,_and_TraB/PrgY/GumN_family


id: CL:6667
description: Mixed, incl. TraB/PrgY/GumN family, and Magnesium chelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6667_Mixed,_incl._TraB/PrgY/GumN_family,_and_Magnesium_chelatase_activity


id: CL:6684
description: Mixed, incl. Glycosyl transferase, family 1, and Outer membrane protein beta-barrel domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6684_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Outer_membrane_protein_beta-barrel_domain_2


id: CL:6697
description: Mixed, incl. Peptidase family M48, and Ligase activity, forming phosphoric ester bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6697_Mixed,_incl._Peptidase_family_M48,_and_Ligase_activity,_forming_phosphoric_ester_bonds


id: CL:6715
description: Mixed, incl. Nitrotoluene degradation, and Vitamin B6 metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6715_Mixed,_incl._Nitrotoluene_degradation,_and_Vitamin_B6_metabolism


id: CL:6716
description: Mixed, incl. Nitrotoluene degradation, and Vitamin B6 metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6716_Mixed,_incl._Nitrotoluene_degradation,_and_Vitamin_B6_metabolism


id: CL:6717
description: Nitrotoluene degradation, and protein-DNA complex
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6717_Nitrotoluene_degradation,_and_protein-DNA_complex


id: CL:6728
description: Vitamin B6 metabolism, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6728_Vitamin_B6_metabolism,_and_Thylakoid


id: CL:6737
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6737_Mixed,_incl._Oxygen-insensitive_NAD(P)H_nitroreductase_NfsB-like,_and_RmlC-like_cupin_domain_superfamily

description:
  Mixed, incl. Oxygen-insensitive NAD(P)H nitroreductase NfsB-like, and RmlC-like cupin domain superfamily


id: CL:6753
description: Mostly uncharacterized, incl. Chromophore, and Sphingoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6753_Mostly_uncharacterized,_incl._Chromophore,_and_Sphingoid_metabolic_process


id: CL:6756
description: Mixed, incl. Chromophore, and Base-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6756_Mixed,_incl._Chromophore,_and_Base-excision_repair


id: CL:6771
description: Mixed, incl. Sphingoid metabolic process, and Tetrapyrrole metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6771_Mixed,_incl._Sphingoid_metabolic_process,_and_Tetrapyrrole_metabolic_process


id: CL:6782
description: Mostly uncharacterized, incl. DNA modification, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6782_Mostly_uncharacterized,_incl._DNA_modification,_and_Fido_domain-containing_protein


id: CL:6783
description: Mixed, incl. DNA modification, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6783_Mixed,_incl._DNA_modification,_and_Fido_domain-containing_protein


id: CL:6784
description: Mixed, incl. DNA modification, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6784_Mixed,_incl._DNA_modification,_and_Fido_domain-containing_protein


id: CL:6785
description: Mixed, incl. DNA modification, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6785_Mixed,_incl._DNA_modification,_and_Fido_domain-containing_protein


id: CL:6786
description: Mixed, incl. DNA modification, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6786_Mixed,_incl._DNA_modification,_and_Fido_domain-containing_protein


id: CL:6789
description: Mixed, incl. DNA modification, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6789_Mixed,_incl._DNA_modification,_and_Fido_domain-containing_protein


id: CL:6791
description: DNA modification, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6791_DNA_modification,_and_Fido_domain-containing_protein


id: CL:6792
description: DNA modification, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6792_DNA_modification,_and_N-6_DNA_Methylase


id: CL:6795
description: Restriction system, and DNA methylase, adenine-specific
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6795_Restriction_system,_and_DNA_methylase,_adenine-specific


id: CL:6827
description: Fido domain-containing protein, and HNH nucleases
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6827_Fido_domain-containing_protein,_and_HNH_nucleases


id: CL:683
description: Homologous recombination, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:683_Homologous_recombination,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:684
description: Homologous recombination, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:684_Homologous_recombination,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:6849
description: Mixed, incl. Response to radiation, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6849_Mixed,_incl._Response_to_radiation,_and_Lipoprotein


id: CL:685
description: Mixed, incl. Homologous recombination, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:685_Mixed,_incl._Homologous_recombination,_and_DNA_repair_complex


id: CL:6865
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6865_Mostly_uncharacterized,_incl._Ribosomal_large_subunit_assembly,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor

description:
  Mostly uncharacterized, incl. Ribosomal large subunit assembly, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor


id: CL:6867
description: Response to inorganic substance, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6867_Response_to_inorganic_substance,_and_Transmembrane_helix


id: CL:687
description: DNA repair, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:687_DNA_repair,_and_UvrD-like_helicase_C-terminal_domain


id: CL:6883
description: Mixed, incl. Ribosomal large subunit assembly, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6883_Mixed,_incl._Ribosomal_large_subunit_assembly,_and_Ferric_iron_binding


id: CL:689
description: Mixed, incl. DNA damage sensor activity, and UvrD-like DNA helicase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:689_Mixed,_incl._DNA_damage_sensor_activity,_and_UvrD-like_DNA_helicase,_C-terminal


id: CL:6906
description: Mixed, incl. Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6906_Mixed,_incl._Sulfite_exporter_TauE/SafE


id: CL:691
description: UvrD-like DNA helicase, C-terminal, and DNA conformation change
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:691_UvrD-like_DNA_helicase,_C-terminal,_and_DNA_conformation_change


id: CL:6918
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6918_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF262,_and_tRNA_(adenine)_methyltransferase_activity

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF262, and tRNA (adenine) methyltransferase activity


id: CL:6919
description: Mixed, incl. Domain of unknown function DUF262, and Protein of unknown function DUF1573
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6919_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_Protein_of_unknown_function_DUF1573


id: CL:6930
description: Mixed, incl. tRNA (adenine) methyltransferase activity, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6930_Mixed,_incl._tRNA_(adenine)_methyltransferase_activity,_and_Coiled_coil


id: CL:694
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:694_Mixed,_incl._3-5_exonuclease,_and_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain

description:
  Mixed, incl. 3-5 exonuclease, and DNA recombination and repair protein RecA-like, ATP-binding domain


id: CL:6941
description: Mostly uncharacterized, incl. Peptidase S9A, N-terminal domain, and SpoIIAA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6941_Mostly_uncharacterized,_incl._Peptidase_S9A,_N-terminal_domain,_and_SpoIIAA-like


id: CL:6942
description: Mixed, incl. Peptidase S9A, N-terminal domain, and SpoIIAA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6942_Mixed,_incl._Peptidase_S9A,_N-terminal_domain,_and_SpoIIAA-like


id: CL:6960
description: Mixed, incl. Oxoglutarate/iron-dependent dioxygenase, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6960_Mixed,_incl._Oxoglutarate/iron-dependent_dioxygenase,_and_Peptidase_M20


id: CL:6971
description: Mixed, incl. Glycerophospholipid metabolism, and Extrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6971_Mixed,_incl._Glycerophospholipid_metabolism,_and_Extrinsic_component_of_membrane


id: CL:6974
description: Extrinsic component of membrane, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6974_Extrinsic_component_of_membrane,_and_Glycerophospholipid_metabolism


id: CL:6989
description: Mixed, incl. carboxyl-O-methyltransferase activity, and DNA geometric change
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:6989_Mixed,_incl._carboxyl-O-methyltransferase_activity,_and_DNA_geometric_change


id: CL:7000
description: Mixed, incl. RDD family, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7000_Mixed,_incl._RDD_family,_and_Transposase_IS3/IS911family


id: CL:7002
description: Mixed, incl. RDD family, and Biological process involved in interaction with host
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7002_Mixed,_incl._RDD_family,_and_Biological_process_involved_in_interaction_with_host


id: CL:7014
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7014_Mixed,_incl._Biological_process_involved_in_interaction_with_host,_and_WD40/YVTN_repeat-like-containing_domain_superfamily

description:
  Mixed, incl. Biological process involved in interaction with host, and WD40/YVTN repeat-like-containing domain superfamily


id: CL:7030
description: Mixed, incl. Transposase IS3/IS911family, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7030_Mixed,_incl._Transposase_IS3/IS911family,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:7033
description: Mixed, incl. Cellular response to heat, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7033_Mixed,_incl._Cellular_response_to_heat,_and_Transposase,_IS4-like


id: CL:7053
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7053_Mixed,_incl._Listeria_monocytogenes_entry_into_host_cells,_and_Metal_ion_transmembrane_transporter_activity

description:
  Mixed, incl. Listeria monocytogenes entry into host cells, and Metal ion transmembrane transporter activity


id: CL:7054
description: Mixed, incl. Listeria monocytogenes entry into host cells, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7054_Mixed,_incl._Listeria_monocytogenes_entry_into_host_cells,_and_Carbohydrate_transport


id: CL:7055
description: Mixed, incl. Listeria monocytogenes entry into host cells, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7055_Mixed,_incl._Listeria_monocytogenes_entry_into_host_cells,_and_Carbohydrate_transport


id: CL:7057
description: Listeria monocytogenes entry into host cells, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7057_Listeria_monocytogenes_entry_into_host_cells,_and_Carbohydrate_transport


id: CL:7058
description: Listeria monocytogenes entry into host cells, and Metallopeptidase, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7058_Listeria_monocytogenes_entry_into_host_cells,_and_Metallopeptidase,_catalytic_domain_superfamily


id: CL:7059
description: Leucine-rich repeats, outliers, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7059_Leucine-rich_repeats,_outliers,_and_Alpha/Beta_hydrolase_fold


id: CL:7064
description: Listeria monocytogenes entry into host cells
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7064_Listeria_monocytogenes_entry_into_host_cells


id: CL:7098
description: Mixed, incl. Metallopeptidase, catalytic domain superfamily, and Leucine-rich repeats, outliers
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7098_Mixed,_incl._Metallopeptidase,_catalytic_domain_superfamily,_and_Leucine-rich_repeats,_outliers


id: CL:7107
description: Mixed, incl. Carbohydrate transport, and Leucine-rich repeats, outliers
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7107_Mixed,_incl._Carbohydrate_transport,_and_Leucine-rich_repeats,_outliers


id: CL:7118
description: Mixed, incl. Leucine rich repeat, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7118_Mixed,_incl._Leucine_rich_repeat,_and_STAS_domain


id: CL:7143
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7143_Mostly_uncharacterized,_incl._Metal_ion_transmembrane_transporter_activity,_and_Nucleoside_recognition

description:
  Mostly uncharacterized, incl. Metal ion transmembrane transporter activity, and Nucleoside recognition


id: CL:7145
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7145_Mixed,_incl._Cytochrome_C_biogenesis_protein_transmembrane_region,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Mixed, incl. Cytochrome C biogenesis protein transmembrane region, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: CL:7164
description: Mixed, incl. Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7164_Mixed,_incl._Tetratricopeptide_repeats


id: CL:7181
description: Mixed, incl. Outer membrane protein beta-barrel domain 2, and Family of unknown function DUF5686
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7181_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain_2,_and_Family_of_unknown_function_DUF5686


id: CL:7182
description: Mixed, incl. Outer membrane protein beta-barrel domain 2, and Family of unknown function DUF5686
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7182_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain_2,_and_Family_of_unknown_function_DUF5686


id: CL:7211
description: Mixed, incl. Amidase activity, and Putative bacterial sensory transduction regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7211_Mixed,_incl._Amidase_activity,_and_Putative_bacterial_sensory_transduction_regulator


id: CL:7224
description: Mostly uncharacterized, incl. Sterol-sensing domain, and UVR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7224_Mostly_uncharacterized,_incl._Sterol-sensing_domain,_and_UVR_domain


id: CL:7225
description: Mostly uncharacterized, incl. UVR domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7225_Mostly_uncharacterized,_incl._UVR_domain,_and_Glycosyl_transferase_family_2


id: CL:7246
description: Mixed, incl. Sterol-sensing domain, and Tyrosinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7246_Mixed,_incl._Sterol-sensing_domain,_and_Tyrosinase_activity


id: CL:7257
description: Mixed, incl. AhpC/TSA family, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7257_Mixed,_incl._AhpC/TSA_family,_and_Transposase_IS3/IS911family


id: CL:7258
description: Mixed, incl. Transposase IS3/IS911family, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7258_Mixed,_incl._Transposase_IS3/IS911family,_and_Integrase,_catalytic_core


id: CL:7260
description: Mixed, incl. Transposase IS3/IS911family, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7260_Mixed,_incl._Transposase_IS3/IS911family,_and_Peptidase_M42


id: CL:7261
description: Mixed, incl. Peptidase M42, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7261_Mixed,_incl._Peptidase_M42,_and_Carbohydrate_binding


id: CL:7270
description: Transposase IS3/IS911family, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7270_Transposase_IS3/IS911family,_and_Integrase,_catalytic_core


id: CL:7289
description: Mixed, incl. AhpC/TSA family, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7289_Mixed,_incl._AhpC/TSA_family,_and_Flavin_reductase_like_domain


id: CL:7292
description: Mixed, incl. Domain of unknown function DUF4412
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7292_Mixed,_incl._Domain_of_unknown_function_DUF4412


id: CL:7305
description: Flavin reductase like domain, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7305_Flavin_reductase_like_domain,_and_AhpC/TSA_family


id: CL:7314
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7314_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Fido_domain


id: CL:7315
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7315_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Fido_domain


id: CL:7317
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7317_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Fido_domain


id: CL:7329
description: Mixed, incl. Tetratricopeptide repeat, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7329_Mixed,_incl._Tetratricopeptide_repeat,_and_Peptidoglycan_binding-like


id: CL:7340
description: Mixed, incl. Protein kinase domain, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7340_Mixed,_incl._Protein_kinase_domain,_and_Secretion_system_C-terminal_sorting_domain


id: CL:735
description: DNA replication, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:735_DNA_replication,_and_Sigma-70_region_3


id: CL:7353
description: Mixed, incl. DNA integration, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7353_Mixed,_incl._DNA_integration,_and_Transposase_activity


id: CL:7354
description: Mixed, incl. DNA integration, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7354_Mixed,_incl._DNA_integration,_and_Transposase_activity


id: CL:7356
description: DNA integration, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7356_DNA_integration,_and_Transposase_activity


id: CL:7358
description: DDE transposase retroviral integrase sub-family, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7358_DDE_transposase_retroviral_integrase_sub-family,_and_Transposase_activity


id: CL:7360
description: DDE transposase retroviral integrase sub-family, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7360_DDE_transposase_retroviral_integrase_sub-family,_and_Transposase_activity


id: CL:7384
description: Mixed, incl. DDE transposase retroviral integrase sub-family, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7384_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_Transposase_activity


id: CL:7397
description: Mixed, incl. Peptidoglycan binding-like, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7397_Mixed,_incl._Peptidoglycan_binding-like,_and_Nucleus


id: CL:7409
description: Mixed, incl. DNA integration, and Helix-turn-helix of insertion element transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7409_Mixed,_incl._DNA_integration,_and_Helix-turn-helix_of_insertion_element_transposase


id: CL:7411
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7411_Mixed,_incl._Helix-turn-helix_of_insertion_element_transposase,_and_Trp_repressor/replication_initiator

description:
  Mixed, incl. Helix-turn-helix of insertion element transposase, and Trp repressor/replication initiator


id: CL:7423
description: Mixed, incl. Transposase, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7423_Mixed,_incl._Transposase,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:7435
description: Mixed, incl. Leucine rich repeat, and Potassium channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7435_Mixed,_incl._Leucine_rich_repeat,_and_Potassium_channel_activity


id: CL:7458
description: Mostly uncharacterized, incl. Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7458_Mostly_uncharacterized,_incl._Chromosome_segregation


id: CL:7528
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and RNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7528_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_RNA_polymerase


id: CL:763
description: DNA topoisomerase, type IIA-like domain superfamily, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:763_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication_initiation


id: CL:7706
description: Mixed, incl. DinB/YfiT-like putative metalloenzymes
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7706_Mixed,_incl._DinB/YfiT-like_putative_metalloenzymes


id: CL:779
description: Base-excision repair, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:779_Base-excision_repair,_and_PHP_domain


id: CL:7818
description: Mixed, incl. Uncharacterised protein family (UPF0227), and TM2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7818_Mixed,_incl._Uncharacterised_protein_family_(UPF0227),_and_TM2_domain


id: CL:7847
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7847_Mostly_uncharacterized,_incl._GldM_C-terminal_domain,_and_DDE_transposase_retroviral_integrase_sub-family

description:
  Mostly uncharacterized, incl. GldM C-terminal domain, and DDE transposase retroviral integrase sub-family


id: CL:7848
description: Mostly uncharacterized, incl. DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7848_Mostly_uncharacterized,_incl._DDE_transposase_retroviral_integrase_sub-family


id: CL:7860
description: Mixed, incl. DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7860_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family


id: CL:7869
description: Mixed, incl. GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7869_Mixed,_incl._GldM_C-terminal_domain


id: CL:7894
description: Mixed, incl. Outer membrane protein/outer membrane enzyme PagP, beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7894_Mixed,_incl._Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel


id: CL:7959
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:7959_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily


id: CL:798
description: Pyrimidine metabolism, and Purine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:798_Pyrimidine_metabolism,_and_Purine_metabolism


id: CL:799
description: Pyrimidine metabolism, and Purine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:799_Pyrimidine_metabolism,_and_Purine_metabolism


id: CL:801
description: Purine metabolism, and Pyrimidine nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:801_Purine_metabolism,_and_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: CL:804
description: Ribonucleoside-diphosphate reductase complex, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:804_Ribonucleoside-diphosphate_reductase_complex,_and_TGS_domain


id: CL:827
description: UMP metabolic process, and Cytidine deaminase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:827_UMP_metabolic_process,_and_Cytidine_deaminase-like


id: CL:856
description: Mixed, incl. 5-Nucleotidase/apyrase, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:856_Mixed,_incl._5-Nucleotidase/apyrase,_and_Leucine-rich_repeat_domain_superfamily


id: CL:857
description: 5-Nucleotidase/apyrase, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:857_5-Nucleotidase/apyrase,_and_Leucine-rich_repeat_domain_superfamily


id: CL:876
description: Mixed, incl. D-alanyl-D-alanine carboxypeptidase, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:876_Mixed,_incl._D-alanyl-D-alanine_carboxypeptidase,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:896
description: Biosynthesis of secondary metabolites, and Small molecule metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:896_Biosynthesis_of_secondary_metabolites,_and_Small_molecule_metabolic_process


id: CL:897
description: Carbon metabolism, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:897_Carbon_metabolism,_and_Fatty_acid_metabolism


id: CL:898
description: Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:898_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:900
description: Citrate cycle (TCA cycle), and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:900_Citrate_cycle_(TCA_cycle),_and_Arginine_biosynthesis


id: CL:901
description: Citrate cycle (TCA cycle), and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:901_Citrate_cycle_(TCA_cycle),_and_Arginine_biosynthesis


id: CL:903
description: Isocitrate/isopropylmalate dehydrogenase, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:903_Isocitrate/isopropylmalate_dehydrogenase,_and_Tricarboxylic_acid_cycle


id: CL:920
description: CoA-ligase, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:920_CoA-ligase,_and_Butanoate_metabolism


id: CL:934
description: Thiamin diphosphate-binding fold, and e3 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:934_Thiamin_diphosphate-binding_fold,_and_e3_binding_domain


id: CL:935
description: Oxoglutarate dehydrogenase complex, and Dihydrolipoamide dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:935_Oxoglutarate_dehydrogenase_complex,_and_Dihydrolipoamide_dehydrogenase


id: CL:944
description: acetyl-CoA biosynthetic process from pyruvate, and Dihydrolipoamide dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:944_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Dihydrolipoamide_dehydrogenase


id: CL:954
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:954_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:955
description: Glycolytic process, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:955_Glycolytic_process,_and_Glucose_metabolic_process


id: CL:957
description: Glycolysis, and Glyceraldehyde 3-phosphate dehydrogenase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:957_Glycolysis,_and_Glyceraldehyde_3-phosphate_dehydrogenase,_active_site


id: CL:996
description: Mixed, incl. Valine, leucine and isoleucine degradation, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:996_Mixed,_incl._Valine,_leucine_and_isoleucine_degradation,_and_AMP-binding_enzyme


id: CL:997
description: Mixed, incl. Fatty acid degradation, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:997_Mixed,_incl._Fatty_acid_degradation,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:999
description: Benzoate degradation, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_984262_STRINGid_CL:999_Benzoate_degradation,_and_acyl-CoA_dehydrogenase_activity


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 7
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 5
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 5
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_984262_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_984262_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


